MD08G1222800.v1.1

Cytochrome p450

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
Physical Location & Seq
Reverse (-)
28557619 .. 28559485
1867 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1222800.v1.1.491

Sequence Viewer

Length: 1761 bp
ATGGCTTCCTTGATTAAAATTGATCTGGTAATTTGTTTGTTTATTCAGTCTATTTCTACAATACAGATTATTATTATTGTGTTACTTTATTCTTTTTCCTTTGATAATTGCTGTCCAACCTCTTTCGTCGAAGGTCGGAGCCCGATCGATCTTATATATATTGTCTGTAGGTTAGGGAAGACGGAGAAGAGATTAACAGAAAAGAAAATGGTGGAGCTGATGAAAATAATAACTGAAACCCTATCATGCTTACTGCAACCATTTTCCTTCAAATATTTCCTACTAGTGGCCATTTTCCTCATCCTCATATACAAATGGTCCTTCACCTCCACACCAAACTCATCGCCACCTTCTCCTCGAAAGCTGCCTGTCATCGGGAACCTTCACCAGCTTGGGTTGTACCCTCATCGCTCACTTGGAGCTTTAGCTCAACGCCACGGGCCTCTCATGATGCTCCATTTTGGAAGCATGCCAGTCCTGGTGGTCTCGTCGGCTGAGGCTGCCTCTGAGGTCATGAAGACCCATGACATCGCATTCTCCAGCAGACCCAAGATCACCTTCTTTAAGAAATTTCTCTACGACTTCAAAGACGTGGCATCGGCGCCTTATGGCGAGTATTGGAGGCAGGTCAAGGGCATATGTGTGTTAAATCTTCTGAGCAGAAAGAAGGTTCGCTCTTTTCGCACAGTGAGAGAAGAGGAAGCCAACTCCATGATCAAAAACATCATGAAGCAATCGACGTCAACTACATCGTCGGTTTCTAATTTAAGCGAAATCTTTCTGACGCTTACTAATGATGTTATCTCTAGAATTACACTTGGGACCAAGTACAGCGATGGTGACGAAGATGGGAAGATGTTTAAGGGGCTTACCGTGGAGTTGACGGAGATAATGTCACGCATCAATATTGGTGACTACATCCCATGGCTTTCTTGGTGCTCACGTCTCAATGGTTTGGATGCTAAGCAAGATGATCTCGCTAAACGATATGATGACTTCTTAGAGACAGTTGTTCAAAAGCATATGGATGGCGATGATCATGTCAAGAACGATGACGAAAAGGATCTTGTGGACGTTTTGCTTTCCCTTCAGAAAGAAAACGTGCTTCCTATTCCTCTCGATCGAGTTTGCATCAAAGCCATCACCTTGGATATGTTTTCGGCTGGCACTGATACAACATCTACAGCCCTAGAGTGGACAATGTCTGAGCTTTTAAGGCATCCCAGAGTAATGAAAAAATTGCAGAACGAGATACGGGGAATAGTCGGAAACAAAACAGACATAACGGAGGATGATTTAGTCGGAATGCACTACTTGAAGGCAGTGATTAAGGAGTCTCTTCGCTTACATCCTCCATTTCCGCTACTGTTGCCCAGGATGTCAACCCAAGATGTTAAAATCAACGGTTACGACATTAAGGCCAACACACAAGTTATAGTGAATGCTTGGCAGATTGGAAGAGATCCCAAGTCATACAACAACCCAGAGGAGTTCGAGCCGGAAAGGTTTTTGAGTAGTGACATAGATTACAAAGGGAAGGACTTCGAATTAATTCCGTTTGGGGCTGGCAGACGGGGTTGCCCCGGAATTCAGTTTGCTGTGGCTGTTAAAGAGATTGCTTTGGCAAATTTAGTCCACAAGTTTGATTGGGCATTGCCTGGTGGTGCAAGAGGGGAGGACCTAGACATGACGGAATCCACGGGTGCGACGGTCCATAGAAAGTATCCTCTAAAAGCAGTAGCTATTCCATATTCTTGCTGA

Protein Analysis

587

Amino Acids

66.19

Weight (kDa)

7.92

Isoelectric Point (pI)

40.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 116 - 565 6.6e-103 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000061)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G48270 AT3G48280 AT3G48290 AT3G48290 AT3G48300 AT3G48300 AT3G48310 AT3G48320 AT4G20235 AT4G20235
fragaria_vesca FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g36190 FvH4_3g14160 FvH4_3g14210 FvH4_3g14260 FvH4_3g14260 FvH4_3g21100 FvH4_3g21380 FvH4_4g24460 FvH4_4g24500 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06572 FvH4_5g06573 FvH4_5g06574 FvH4_5g06575 FvH4_5g06576 FvH4_5g06577 FvH4_5g06577 FvH4_5g07540 FvH4_5g07550 FvH4_5g07560 FvH4_5g07570 FvH4_5g29491 FvH4_5g29492 FvH4_6g23870 FvH4_6g23880 FvH4_6g26870 FvH4_7g11861 FvH4_7g11862 FvH4_7g13050 FvH4_7g13060 FvH4_7g13080 FvH4_7g13080 FvH4_7g22630 FvH4_7g22650 FvH4_7g22651 FvH4_7g23020
malus_domestica MD03G1207400.v1.1 MD03G1214800.v1.1 MD03G1218500.v1.1 MD06G1163100.v1.1 MD06G1163300.v1.1 MD06G1163400.v1.1 MD06G1163500.v1.1 MD06G1163600.v1.1 MD06G1163800.v1.1 MD06G1164000.v1.1 MD06G1164100.v1.1 MD06G1224400.v1.1 MD08G1222800.v1.1 MD08G1222900.v1.1 MD08G1223100.v1.1 MD11G1091500.v1.1 MD11G1091800.v1.1 MD14G1163200.v1.1 MD14G1169000.v1.1 MD15G1207200.v1.1 MD15G1207300.v1.1 MD17G1259400.v1.1
prunus_persica Prupe.4G198100_v2.0.a1 Prupe.4G199100_v2.0.a1 Prupe.4G199400_v2.0.a1 Prupe.4G199800_v2.0.a1 Prupe.4G225200_v2.0.a1 Prupe.4G239100_v2.0.a1 Prupe.5G156600_v2.0.a1 Prupe.5G163500_v2.0.a1 Prupe.7G209500_v2.0.a1 Prupe.I003400_v2.0.a1
pyrus_communis pycom03g16340 pycom06g14600 pycom06g14610 pycom06g14620 pycom06g14630 pycom06g14640 pycom06g14670 pycom06g14690 pycom08g19390 pycom08g19400 pycom08g19410 pycom11g07600 pycom11g07610 pycom11g07620 pycom11g07660 pycom14g13580 pycom14g14080 pycom14g14100 pycom14g14110 pycom15g18380 pycom17g26080
rosa_chinensis RchiOBHm_Chr1g0339441 RchiOBHm_Chr1g0339451 RchiOBHm_Chr1g0352191 RchiOBHm_Chr1g0368221 RchiOBHm_Chr2g0129531 RchiOBHm_Chr2g0129541 RchiOBHm_Chr3g0477631 RchiOBHm_Chr3g0482551 RchiOBHm_Chr3g0482561 RchiOBHm_Chr3g0482571 RchiOBHm_Chr4g0411601 RchiOBHm_Chr4g0422181 RchiOBHm_Chr5g0036661 RchiOBHm_Chr5g0036731 RchiOBHm_Chr6g0274021 RchiOBHm_Chr7g0190921 RchiOBHm_Chr7g0190931 RchiOBHm_Chr7g0190941 RchiOBHm_Chr7g0190951 RchiOBHm_Chr7g0190961 RchiOBHm_Chr7g0190971 RchiOBHm_Chr7g0191001 RchiOBHm_Chr7g0191011 RchiOBHm_Chr7g0191021 RchiOBHm_Chr7g0192181 RchiOBHm_Chr7g0192191 RchiOBHm_Chr7g0192201 RchiOBHm_Chr7g0192221 RchiOBHm_Chr7g0192231 RchiOBHm_Chr7g0192281 RchiOBHm_Chr7g0197311
rosa_laevigata RLG00000003942 RLG00000004345 RLG00000004379 RLG00000004383 RLG00000004384 RLG00000004385 RLG00000004387 RLG00000004388 RLG00000004389 RLG00000004480 RLG00000004481 RLG00000004482 RLG00000004483 RLG00000004485 RLG00000008342 RLG00000008401 RLG00000013583 RLG00000017044 RLG00000027229 RLG00000028349 RLG00000028350 RLG00000028353 RLG00000028820 RLG00000033707 RLG00000033710
rosa_multiflora Rmu_co8020340.1_g000001 Rmu_co8096640.1_g000001 Rmu_co8214930.1_g000001 Rmu_co8223272.1_g000001 Rmu_co8282535.1_g000001 Rmu_co8343567.1_g000001 Rmu_co8404191.1_g000001 Rmu_co8455157.1_g000001 Rmu_sc0000062.1_g000028 Rmu_sc0000082.1_g000091 Rmu_sc0000509.1_g000017 Rmu_sc0000775.1_g000001 Rmu_sc0000999.1_g000034 Rmu_sc0001559.1_g000004 Rmu_sc0001559.1_g000009 Rmu_sc0002164.1_g000001 Rmu_sc0002164.1_g000005 Rmu_sc0002164.1_g000007 Rmu_sc0002164.1_g000008 Rmu_sc0002164.1_g000009 Rmu_sc0002164.1_g000019 Rmu_sc0002247.1_g000009 Rmu_sc0002373.1_g000002 Rmu_sc0002373.1_g000003 Rmu_sc0002944.1_g000059 Rmu_sc0003930.1_g000004 Rmu_sc0004958.1_g000001 Rmu_sc0005197.1_g000014 Rmu_sc0005898.1_g000008 Rmu_sc0005898.1_g000009 Rmu_sc0005898.1_g000015 Rmu_sc0006059.1_g000004 Rmu_sc0006059.1_g000010 Rmu_sc0006903.1_g000007 Rmu_sc0006903.1_g000008 Rmu_sc0006968.1_g000001 Rmu_sc0011009.1_g000009 Rmu_sc0022852.1_g000002 Rmu_sc0033854.1_g000001 Rmu_ssc0000421.1_g000057 Rmu_ssc0000421.1_g000067 Rmu_ssc0000421.1_g000069 Rmu_ssc0000421.1_g000072 Rmu_ssc0000421.1_g000081 Rmu_ssc0000421.1_g000086
rosa_roxburghii Rroxscaffold_158G00443680 Rroxscaffold_158G00443710 Rroxscaffold_158G00443720 Rroxscaffold_158G00443740 Rroxscaffold_1G00034950 Rroxscaffold_1G00044240 Rroxscaffold_1G00044270 Rroxscaffold_3G00241380 Rroxscaffold_3G00247000 Rroxscaffold_3G00263120 Rroxscaffold_3G00263150 Rroxscaffold_3G00263160 Rroxscaffold_3G00263170 Rroxscaffold_3G00263180 Rroxscaffold_3G00263190 Rroxscaffold_3G00263210 Rroxscaffold_3G00263230 Rroxscaffold_3G00263260 Rroxscaffold_3G00264110 Rroxscaffold_3G00264130 Rroxscaffold_3G00264160 Rroxscaffold_3G00264180 Rroxscaffold_3G00264200 Rroxscaffold_4G00288750 Rroxscaffold_4G00303110 Rroxscaffold_4G00303120 Rroxscaffold_4G00322280 Rroxscaffold_5G00356200 Rroxscaffold_6G00399150 Rroxscaffold_6G00399290 Rroxscaffold_7G00194770
rosa_rugosa Rorug01G0225300 Rorug01G0225400 Rorug01G0225800 Rorug01G0226000 Rorug01G0339400 Rorug01G0451500 Rorug03G0196900 Rorug03G0294900 Rorug04G0107500 Rorug04G0107600 Rorug04G0129700 Rorug04G0178000 Rorug05G0144900.1 Rorug05G0145000 Rorug05G0228000 Rorug05G0228600 Rorug06G0078300 Rorug06G0508000 Rorug06G0508100 Rorug06G0508100 Rorug06G0508400 Rorug06G0513400 Rorug07G0000100 Rorug07G0000200 Rorug07G0000300 Rorug07G0000500 Rorug07G0000800
rosa_samantha Rh1BG060400 Rh1BG210300 Rh1BG210700 Rh1BG210800 Rh1BG309800 Rh1CG223800 Rh1CG224200 Rh1CG325200 Rh1DG237000 Rh1DG237400 Rh1DG341600 Rh2DG365700 Rh3AG212500 Rh3AG248400 Rh3CG239800 Rh3DG239300 Rh4AG169300 Rh4BG166200 Rh4BG240500 Rh4BG240600 Rh4DG163600 Rh5AG249600 Rh5AG249900 Rh5AG250000 Rh5CG283100 Rh5CG283200 Rh5CG283400 Rh5DG259200 Rh5DG259800 Rh6BG197700 Rh6CG197800 Rh6DG189400 Rh7AG114900 Rh7AG115000 Rh7AG115200 Rh7AG115300 Rh7AG115400 Rh7AG115500 Rh7AG123900 Rh7AG124100 Rh7AG124300 Rh7BG117200 Rh7BG117400 Rh7BG118400 Rh7BG125400 Rh7BG125600 Rh7BG125700 Rh7BG125800 Rh7BG125900 Rh7BG126000 Rh7BG126400 Rh7BG126600 Rh7BG126700 Rh7BG166200 Rh7DG118600 Rh7DG118700 Rh7DG118900 Rh7DG119000 Rh7DG119100 Rh7DG127400 Rh7DG127600 Rh7DG127700 Rh7DG127900 Rh7DG128200
rosa_wichuraiana Rw1G013270 Rw1G020790 Rw2G027890 Rw2G028040 Rw3G019240 Rw4G014070 Rw4G020540 Rw5G021320 Rw5G022970 Rw6G016920 Rw7G010020 Rw7G010040 Rw7G010580 Rw7G010590 Rw7G010600 Rw7G010610 Rw7G010620 Rw7G010630 Rw7G010640 Rw7G010690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 743
Acc36I ACCTGC 1 cut(s) 616
AccB1I GGYRCC 1 cut(s) 601
AciI CCGC 1 cut(s) 1361
AclWI GGATC 2 cut(s) 1071, 1457
AcoI YGGCCR 1 cut(s) 288
AcsI RAATTY 3 cut(s) 569, 1587, 1627
AcuI CTGAAG 1 cut(s) 1073
AcyI GRCGYC 2 cut(s) 602, 740
AfaI GTAC 2 cut(s) 401, 830
AfiI CCNNNNNNNGG 3 cut(s) 286, 374, 1194
AgsI TTSAA 4 cut(s) 271, 586, 1016, 1318
AhlI ACTAGT 1 cut(s) 283
AjiI CACGTC 2 cut(s) 592, 944
AjnI CCWGG 3 cut(s) 477, 1373, 1657
AjuI GAANNNNNNNTTGG 2 cut(s) 542, 574
AluBI AGCT 7 cut(s) 217, 364, 391, 422, 428, 1210, 1742
AluI AGCT 7 cut(s) 217, 364, 391, 422, 428, 1210, 1742
Alw21I GWGCWC 1 cut(s) 941
Alw26I GTCTC 4 cut(s) 490, 950, 998, 1341
AlwI GGATC 2 cut(s) 1071, 1457
AoxI GGCC 3 cut(s) 288, 440, 1419
ApeKI GCWGC 2 cut(s) 364, 500
ApoI RAATTY 3 cut(s) 569, 1587, 1627
AseI ATTAAT 1 cut(s) 1550
Asp700I GAANNNNTTC 3 cut(s) 777, 1541, 1551
AspLEI GCGC 1 cut(s) 604
AspS9I GGNCC 5 cut(s) 318, 440, 822, 1678, 1711
AsuC2I CCSGG 1 cut(s) 1584
AsuHPI GGTGA 6 cut(s) 316, 377, 547, 851, 923, 1135
AsuII TTCGAA 1 cut(s) 1545
AvaII GGWCC 4 cut(s) 318, 822, 1678, 1711
BalI TGGCCA 1 cut(s) 290
BanI GGYRCC 1 cut(s) 601
BanII GRGCYC 1 cut(s) 143
BbsI GAAGAC 2 cut(s) 185, 524
Bbv12I GWGCWC 1 cut(s) 941
BbvCI CCTCAGC 1 cut(s) 495
BbvI GCAGC 2 cut(s) 351, 487
BccI CCATC 4 cut(s) 830, 842, 1022, 1148
BciT130I CCWGG 3 cut(s) 479, 1375, 1659
BciVI GTATCC 1 cut(s) 1734
BclI TGATCA 2 cut(s) 714, 1036
BcnI CCSGG 1 cut(s) 1584
BcoDI GTCTC 4 cut(s) 490, 950, 998, 1341
BcuI ACTAGT 1 cut(s) 283
BfaI CTAG 4 cut(s) 284, 807, 1190, 1682
BfmI CTRYAG 2 cut(s) 166, 1182
BfoI RGCGCY 1 cut(s) 605
BfuAI ACCTGC 1 cut(s) 616
BfuI GTATCC 1 cut(s) 1734
BisI GCNGC 2 cut(s) 365, 501
BlpI GCTNAGC 1 cut(s) 963
BlsI GCNGC 2 cut(s) 366, 502
Bme1390I CCNGG 4 cut(s) 479, 1375, 1584, 1659
Bme18I GGWCC 4 cut(s) 318, 822, 1678, 1711
BmgBI CACGTC 2 cut(s) 592, 944
BmgT120I GGNCC 5 cut(s) 318, 440, 822, 1678, 1711
BmiI GGNNCC 4 cut(s) 140, 380, 603, 823
BmrFI CCNGG 4 cut(s) 479, 1375, 1584, 1659
BmsI GCATC 6 cut(s) 441, 605, 909, 949, 1140, 1228
BpiI GAAGAC 2 cut(s) 185, 524
BplI GAGNNNNNCTC 2 cut(s) 488, 520
BpmI CTGGAG 1 cut(s) 523
Bpu10I CCTNAGC 1 cut(s) 495
Bpu1102I GCTNAGC 1 cut(s) 963
Bpu14I TTCGAA 1 cut(s) 1545
BpuMI CCSGG 1 cut(s) 1584
Bsa29I ATCGAT 1 cut(s) 147
BsaHI GRCGYC 2 cut(s) 602, 740
BsaI GGTCTC 1 cut(s) 490
BsaJI CCNNGG 7 cut(s) 436, 873, 923, 1146, 1373, 1582, 1698
BsaXI ACNNNNNCTCC 2 cut(s) 878, 908
Bsc4I CCNNNNNNNGG 3 cut(s) 286, 374, 1194
Bse1I ACTGG 1 cut(s) 473
Bse3DI GCAATG 1 cut(s) 1652
BseBI CCWGG 3 cut(s) 479, 1375, 1659
BseCI ATCGAT 1 cut(s) 147
BseDI CCNNGG 7 cut(s) 436, 873, 923, 1146, 1373, 1582, 1698
BseGI GGATG 8 cut(s) 300, 918, 964, 1033, 1219, 1297, 1348, 1383
BseLI CCNNNNNNNGG 3 cut(s) 286, 374, 1194
BseMI GCAATG 1 cut(s) 1652
BseMII CTCAG 4 cut(s) 486, 498, 647, 1197
BseNI ACTGG 1 cut(s) 473
BseRI GAGGAG 2 cut(s) 345, 1502
BseXI GCAGC 2 cut(s) 351, 487
Bsh1285I CGRYCG 2 cut(s) 147, 1123
BshFI GGCC 3 cut(s) 290, 442, 1421
BshNI GGYRCC 1 cut(s) 601
BshVI ATCGAT 1 cut(s) 147
BsiEI CGRYCG 2 cut(s) 147, 1123
BsiHKAI GWGCWC 1 cut(s) 941
BsiSI CCGG 2 cut(s) 1499, 1584
BslFI GGGAC 1 cut(s) 835
BslI CCNNNNNNNGG 3 cut(s) 286, 374, 1194
BsmAI GTCTC 4 cut(s) 490, 950, 998, 1341
BsmBI CGTCTC 1 cut(s) 950
BsmFI GGGAC 1 cut(s) 835
BsmI GAATGC 3 cut(s) 533, 1311, 1447
BsnI GGCC 3 cut(s) 290, 442, 1421
Bso31I GGTCTC 1 cut(s) 490
Bsp119I TTCGAA 1 cut(s) 1545
Bsp1286I GDGCHC 2 cut(s) 143, 941
Bsp1720I GCTNAGC 1 cut(s) 963
Bsp19I CCATGG 1 cut(s) 923
BspACI CCGC 1 cut(s) 1361
BspANI GGCC 3 cut(s) 290, 442, 1421
BspCNI CTCAG 4 cut(s) 487, 499, 648, 1198
BspDI ATCGAT 1 cut(s) 147
BspHI TCATGA 3 cut(s) 447, 513, 726
BspLI GGNNCC 4 cut(s) 140, 380, 603, 823
BspMI ACCTGC 1 cut(s) 616
BspPI GGATC 2 cut(s) 1071, 1457
BspT104I TTCGAA 1 cut(s) 1545
BspT107I GGYRCC 1 cut(s) 601
BspTNI GGTCTC 1 cut(s) 490
BsrDI GCAATG 1 cut(s) 1652
BsrI ACTGG 1 cut(s) 473
BssECI CCNNGG 7 cut(s) 436, 873, 923, 1146, 1373, 1582, 1698
BssNI GRCGYC 2 cut(s) 602, 740
BssT1I CCWWGG 2 cut(s) 923, 1146
Bst2UI CCWGG 3 cut(s) 479, 1375, 1659
Bst4CI ACNGT 6 cut(s) 688, 874, 1009, 1368, 1406, 1711
Bst6I CTCTTC 4 cut(s) 182, 690, 1344, 1453
BstACI GRCGYC 2 cut(s) 602, 740
BstBI TTCGAA 1 cut(s) 1545
BstC8I GCNNGC 3 cut(s) 470, 1165, 1567
BstDEI CTNAG 6 cut(s) 495, 507, 656, 963, 1000, 1206
BstDSI CCRYGG 4 cut(s) 436, 873, 923, 1698
BstF5I GGATG 8 cut(s) 300, 918, 964, 1033, 1219, 1297, 1348, 1383
BstH2I RGCGCY 1 cut(s) 605
BstHHI GCGC 1 cut(s) 604
BstMAI GTCTC 4 cut(s) 490, 950, 998, 1341
BstMCI CGRYCG 2 cut(s) 147, 1123
BstMWI GCNNNNNNNGC 4 cut(s) 500, 681, 1216, 1369
BstNI CCWGG 3 cut(s) 479, 1375, 1659
BstNSI RCATGY 1 cut(s) 472
BstSCI CCNGG 4 cut(s) 477, 1373, 1582, 1657
BstSFI CTRYAG 2 cut(s) 166, 1182
BstV1I GCAGC 2 cut(s) 351, 487
BstV2I GAAGAC 2 cut(s) 185, 524
BstX2I RGATCY 2 cut(s) 1063, 1462
BstXI CCANNNNNNTGG 1 cut(s) 1147
BstYI RGATCY 2 cut(s) 1063, 1462
Bsu15I ATCGAT 1 cut(s) 147
BsuI GTATCC 1 cut(s) 1734
BsuRI GGCC 3 cut(s) 290, 442, 1421
BsuTUI ATCGAT 1 cut(s) 147
BtgI CCRYGG 4 cut(s) 436, 873, 923, 1698
BtgZI GCGATG 5 cut(s) 327, 392, 514, 849, 1047
BtrI CACGTC 2 cut(s) 592, 944
BtsCI GGATG 8 cut(s) 300, 918, 964, 1033, 1219, 1297, 1348, 1383
BtsI GCAGTG 1 cut(s) 1329
BtsIMutI CAGTG 3 cut(s) 693, 1167, 1329
BveI ACCTGC 1 cut(s) 616
Cac8I GCNNGC 3 cut(s) 470, 1165, 1567
CciI TCATGA 3 cut(s) 447, 513, 726
CfoI GCGC 1 cut(s) 604
Cfr13I GGNCC 5 cut(s) 318, 440, 822, 1678, 1711
ClaI ATCGAT 1 cut(s) 147
CseI GACGC 1 cut(s) 793
Csp6I GTAC 2 cut(s) 400, 829
CviQI GTAC 2 cut(s) 400, 829
DdeI CTNAG 6 cut(s) 495, 507, 656, 963, 1000, 1206
DinI GGCGCC 1 cut(s) 603
EaeI YGGCCR 1 cut(s) 288
Eam1104I CTCTTC 4 cut(s) 182, 690, 1344, 1453
EarI CTCTTC 4 cut(s) 182, 690, 1344, 1453
Eco130I CCWWGG 2 cut(s) 923, 1146
Eco24I GRGCYC 1 cut(s) 143
Eco31I GGTCTC 1 cut(s) 490
Eco47I GGWCC 4 cut(s) 318, 822, 1678, 1711
Eco57I CTGAAG 1 cut(s) 1073
EcoO109I RGGNCCY 1 cut(s) 1678
EcoRI GAATTC 1 cut(s) 1587
EcoRII CCWGG 3 cut(s) 477, 1373, 1657
EcoT14I CCWWGG 2 cut(s) 923, 1146
EcoT38I GRGCYC 1 cut(s) 143
EgeI GGCGCC 1 cut(s) 603
EheI GGCGCC 1 cut(s) 603
ErhI CCWWGG 2 cut(s) 923, 1146
Esp3I CGTCTC 1 cut(s) 950
FalI AAGNNNNNCTT 2 cut(s) 542, 574
FaqI GGGAC 1 cut(s) 835
FauNDI CATATG 2 cut(s) 638, 1023
FbaI TGATCA 2 cut(s) 714, 1036
Fnu4HI GCNGC 2 cut(s) 365, 501
FokI GGATG 8 cut(s) 287, 905, 971, 1040, 1206, 1304, 1335, 1390
FriOI GRGCYC 1 cut(s) 143
Fsp4HI GCNGC 2 cut(s) 365, 501
FspBI CTAG 4 cut(s) 284, 807, 1190, 1682
GlaI GCGC 1 cut(s) 603
GluI GCNGC 2 cut(s) 365, 501
GsuI CTGGAG 1 cut(s) 523
HaeII RGCGCY 1 cut(s) 605
HaeIII GGCC 3 cut(s) 290, 442, 1421
HapII CCGG 2 cut(s) 1499, 1584
HgaI GACGC 1 cut(s) 793
HhaI GCGC 1 cut(s) 604
Hin1I GRCGYC 2 cut(s) 602, 740
Hin6I GCGC 1 cut(s) 602
HinP1I GCGC 1 cut(s) 602
HincII GTYRAC 3 cut(s) 744, 882, 1383
HindII GTYRAC 3 cut(s) 744, 882, 1383
HinfI GANTC 2 cut(s) 1334, 1694
HpaII CCGG 2 cut(s) 1499, 1584
HphI GGTGA 6 cut(s) 316, 377, 547, 851, 923, 1135
Hpy166II GTNNAC 6 cut(s) 744, 882, 1072, 1197, 1383, 1636
Hpy188I TCNGA 8 cut(s) 138, 508, 657, 783, 1092, 1207, 1268, 1304
Hpy188III TCNNGA 7 cut(s) 376, 448, 514, 727, 807, 1045, 1118
Hpy8I GTNNAC 6 cut(s) 744, 882, 1072, 1197, 1383, 1636
Hpy99I CGWCG 5 cut(s) 131, 493, 742, 757, 1711
HpyCH4III ACNGT 6 cut(s) 688, 874, 1009, 1368, 1406, 1711
HpyCH4IV ACGT 5 cut(s) 591, 740, 943, 1074, 1101
HpyCH4V TGCA 5 cut(s) 256, 1131, 1243, 1309, 1667
HpyF10VI GCNNNNNNNGC 4 cut(s) 500, 681, 1216, 1369
HpyF3I CTNAG 6 cut(s) 495, 507, 656, 963, 1000, 1206
HpySE526I ACGT 5 cut(s) 591, 740, 943, 1074, 1101
Hsp92I GRCGYC 2 cut(s) 602, 740
HspAI GCGC 1 cut(s) 602
KasI GGCGCC 1 cut(s) 601
Ksp22I TGATCA 2 cut(s) 714, 1036
LmnI GCTCC 4 cut(s) 138, 214, 419, 459
Lsp1109I GCAGC 2 cut(s) 351, 487
LweI GCATC 6 cut(s) 441, 605, 909, 949, 1140, 1228
MaeI CTAG 4 cut(s) 284, 807, 1190, 1682
MaeII ACGT 5 cut(s) 591, 740, 943, 1074, 1101
MaeIII GTNAC 6 cut(s) 81, 839, 894, 911, 1406, 1517
MboII GAAGA 9 cut(s) 190, 199, 529, 644, 707, 857, 865, 1331, 1470
MflI RGATCY 2 cut(s) 1063, 1462
MhlI GDGCHC 2 cut(s) 143, 941
MlsI TGGCCA 1 cut(s) 290
MluNI TGGCCA 1 cut(s) 290
Mly113I GGCGCC 1 cut(s) 602
MlyI GAGTC 1 cut(s) 1343
MmeI TCCRAC 4 cut(s) 116, 140, 1246, 1282
Mox20I TGGCCA 1 cut(s) 290
MroXI GAANNNNTTC 3 cut(s) 777, 1541, 1551
MscI TGGCCA 1 cut(s) 290
MslI CAYNNNNRTG 2 cut(s) 641, 1026
Msp20I TGGCCA 1 cut(s) 290
MspI CCGG 2 cut(s) 1499, 1584
MspR9I CCNGG 4 cut(s) 479, 1375, 1584, 1659
Mva1269I GAATGC 3 cut(s) 533, 1311, 1447
MvaI CCWGG 3 cut(s) 479, 1375, 1659
MwoI GCNNNNNNNGC 4 cut(s) 500, 681, 1216, 1369
NarI GGCGCC 1 cut(s) 602
NciI CCSGG 1 cut(s) 1584
NcoI CCATGG 1 cut(s) 923
NdeI CATATG 2 cut(s) 638, 1023
NlaIV GGNNCC 4 cut(s) 140, 380, 603, 823
NmuCI GTSAC 4 cut(s) 839, 894, 911, 1517
NspI RCATGY 1 cut(s) 472
NspV TTCGAA 1 cut(s) 1545
PaeI GCATGC 1 cut(s) 472
PagI TCATGA 3 cut(s) 447, 513, 726
PctI GAATGC 3 cut(s) 533, 1311, 1447
PdmI GAANNNNTTC 3 cut(s) 777, 1541, 1551
PfeI GAWTC 1 cut(s) 1694
PflFI GACNNNGTC 1 cut(s) 1201
PkrI GCNGC 2 cut(s) 366, 502
Ple19I CGATCG 2 cut(s) 147, 1123
PleI GAGTC 1 cut(s) 1342
PluTI GGCGCC 1 cut(s) 605
PpsI GAGTC 1 cut(s) 1342
PpuMI RGGWCCY 1 cut(s) 1678
PshBI ATTAAT 1 cut(s) 1550
Psp5II RGGWCCY 1 cut(s) 1678
Psp6I CCWGG 3 cut(s) 477, 1373, 1657
PspGI CCWGG 3 cut(s) 477, 1373, 1657
PspN4I GGNNCC 4 cut(s) 140, 380, 603, 823
PspPI GGNCC 5 cut(s) 318, 440, 822, 1678, 1711
PspPPI RGGWCCY 1 cut(s) 1678
PsuI RGATCY 2 cut(s) 1063, 1462
PsyI GACNNNGTC 1 cut(s) 1201
PvuI CGATCG 2 cut(s) 147, 1123
RsaI GTAC 2 cut(s) 401, 830
RsaNI GTAC 2 cut(s) 400, 829
RseI CAYNNNNRTG 2 cut(s) 641, 1026
SatI GCNGC 2 cut(s) 365, 501
Sau96I GGNCC 5 cut(s) 318, 440, 822, 1678, 1711
SchI GAGTC 1 cut(s) 1343
ScrFI CCNGG 4 cut(s) 479, 1375, 1584, 1659
SduI GDGCHC 2 cut(s) 143, 941
SfaNI GCATC 6 cut(s) 441, 605, 909, 949, 1140, 1228
SfcI CTRYAG 2 cut(s) 166, 1182
SfoI GGCGCC 1 cut(s) 603
SfuI TTCGAA 1 cut(s) 1545
SinI GGWCC 4 cut(s) 318, 822, 1678, 1711
SmiMI CAYNNNNRTG 2 cut(s) 641, 1026
SpeI ACTAGT 1 cut(s) 283
SphI GCATGC 1 cut(s) 472
SsiI CCGC 1 cut(s) 1361
SspDI GGCGCC 1 cut(s) 601
SspI AATATT 2 cut(s) 275, 907
SspMI CTAG 4 cut(s) 284, 807, 1190, 1682
StyD4I CCNGG 4 cut(s) 477, 1373, 1582, 1657
StyI CCWWGG 2 cut(s) 923, 1146
TaaI ACNGT 6 cut(s) 688, 874, 1009, 1368, 1406, 1711
TaiI ACGT 5 cut(s) 594, 743, 946, 1077, 1104
TaqI TCGA 8 cut(s) 129, 147, 358, 737, 1119, 1123, 1494, 1545
TatI WGTACW 1 cut(s) 828
TfiI GAWTC 1 cut(s) 1694
TscAI CASTG 3 cut(s) 693, 1174, 1329
TseFI GTSAC 4 cut(s) 839, 894, 911, 1517
TseI GCWGC 2 cut(s) 364, 500
Tsp45I GTSAC 4 cut(s) 839, 894, 911, 1517
TspDTI ATGAA 4 cut(s) 236, 530, 743, 1247
TspGWI ACGGA 5 cut(s) 197, 899, 1301, 1545, 1706
TspRI CASTG 3 cut(s) 693, 1174, 1329
Tth111I GACNNNGTC 1 cut(s) 1201
VpaK11BI GGWCC 4 cut(s) 318, 822, 1678, 1711
VspI ATTAAT 1 cut(s) 1550
XapI RAATTY 3 cut(s) 569, 1587, 1627
XbaI TCTAGA 1 cut(s) 806
XceI RCATGY 1 cut(s) 472
XcmI CCANNNNNNNNNTGG 1 cut(s) 930
XmnI GAANNNNTTC 3 cut(s) 777, 1541, 1551
XspI CTAG 4 cut(s) 284, 807, 1190, 1682
ZraI GACGTC 1 cut(s) 741
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.