FvH4_5g07550

Cytochrome p450

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Reverse (-)
4412999 .. 4413815
817 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g07550.t1

Sequence Viewer

Length: 561 bp
ATGAAGGCGGAGGACGAAAAGGATTTTGTGGACGTTTTACTTGATATTCAGCAGCAAAACTCTCTTGGTTTTCGTATGGACAAAATTTGCATGAAGGGTGTCATCTTGGATATGTTTCTTGCTGGAACTGATACCATACCTACACTCGTAGAATGGACCATGGCTGAGATTATAAGGCACCCAAAGGTCATGAGAAAATTGCAGGCTGAAATTAGGGCTGTCAACAAAGGTAAAGAAGACATATTAACAGAGGATGATTTGATCGAGATGCACTACTTGAAGGCGGTGATCAAAGAGCCTCTTCGCTTGCATCCTCCACTTTCGCTATTAGTGCCTAGGATATCGACCCAAGATGTGAAACTAAATGGTAGGAGGATGTGTCCCGGGATTCAGTTTGCTATCGCTGTTGAGGAAATTGCTCTAGCAAATTTAGTGCACAAGTTTGATTGGACATTGCCTGCCAGTGGAGTAAGAAGCGAGGATCTAGACATGACTGAATCATCTGGTATAACAATTCATAAAAAGCACCCGCTTAAAGCCTTTGCCACACCACATTCATAA

Protein Analysis

187

Amino Acids

21.06

Weight (kDa)

6.16

Isoelectric Point (pI)

45.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 4 - 123 1e-28 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000061)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G48270 AT3G48280 AT3G48290 AT3G48290 AT3G48300 AT3G48300 AT3G48310 AT3G48320 AT4G20235 AT4G20235
fragaria_vesca FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g36190 FvH4_3g14160 FvH4_3g14210 FvH4_3g14260 FvH4_3g14260 FvH4_3g21100 FvH4_3g21380 FvH4_4g24460 FvH4_4g24500 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06572 FvH4_5g06573 FvH4_5g06574 FvH4_5g06575 FvH4_5g06576 FvH4_5g06577 FvH4_5g06577 FvH4_5g07540 FvH4_5g07550 FvH4_5g07560 FvH4_5g07570 FvH4_5g29491 FvH4_5g29492 FvH4_6g23870 FvH4_6g23880 FvH4_6g26870 FvH4_7g11861 FvH4_7g11862 FvH4_7g13050 FvH4_7g13060 FvH4_7g13080 FvH4_7g13080 FvH4_7g22630 FvH4_7g22650 FvH4_7g22651 FvH4_7g23020
malus_domestica MD03G1207400.v1.1 MD03G1214800.v1.1 MD03G1218500.v1.1 MD06G1163100.v1.1 MD06G1163300.v1.1 MD06G1163400.v1.1 MD06G1163500.v1.1 MD06G1163600.v1.1 MD06G1163800.v1.1 MD06G1164000.v1.1 MD06G1164100.v1.1 MD06G1224400.v1.1 MD08G1222800.v1.1 MD08G1222900.v1.1 MD08G1223100.v1.1 MD11G1091500.v1.1 MD11G1091800.v1.1 MD14G1163200.v1.1 MD14G1169000.v1.1 MD15G1207200.v1.1 MD15G1207300.v1.1 MD17G1259400.v1.1
prunus_persica Prupe.4G198100_v2.0.a1 Prupe.4G199100_v2.0.a1 Prupe.4G199400_v2.0.a1 Prupe.4G199800_v2.0.a1 Prupe.4G225200_v2.0.a1 Prupe.4G239100_v2.0.a1 Prupe.5G156600_v2.0.a1 Prupe.5G163500_v2.0.a1 Prupe.7G209500_v2.0.a1 Prupe.I003400_v2.0.a1
pyrus_communis pycom03g16340 pycom06g14600 pycom06g14610 pycom06g14620 pycom06g14630 pycom06g14640 pycom06g14670 pycom06g14690 pycom08g19390 pycom08g19400 pycom08g19410 pycom11g07600 pycom11g07610 pycom11g07620 pycom11g07660 pycom14g13580 pycom14g14080 pycom14g14100 pycom14g14110 pycom15g18380 pycom17g26080
rosa_chinensis RchiOBHm_Chr1g0339441 RchiOBHm_Chr1g0339451 RchiOBHm_Chr1g0352191 RchiOBHm_Chr1g0368221 RchiOBHm_Chr2g0129531 RchiOBHm_Chr2g0129541 RchiOBHm_Chr3g0477631 RchiOBHm_Chr3g0482551 RchiOBHm_Chr3g0482561 RchiOBHm_Chr3g0482571 RchiOBHm_Chr4g0411601 RchiOBHm_Chr4g0422181 RchiOBHm_Chr5g0036661 RchiOBHm_Chr5g0036731 RchiOBHm_Chr6g0274021 RchiOBHm_Chr7g0190921 RchiOBHm_Chr7g0190931 RchiOBHm_Chr7g0190941 RchiOBHm_Chr7g0190951 RchiOBHm_Chr7g0190961 RchiOBHm_Chr7g0190971 RchiOBHm_Chr7g0191001 RchiOBHm_Chr7g0191011 RchiOBHm_Chr7g0191021 RchiOBHm_Chr7g0192181 RchiOBHm_Chr7g0192191 RchiOBHm_Chr7g0192201 RchiOBHm_Chr7g0192221 RchiOBHm_Chr7g0192231 RchiOBHm_Chr7g0192281 RchiOBHm_Chr7g0197311
rosa_laevigata RLG00000003942 RLG00000004345 RLG00000004379 RLG00000004383 RLG00000004384 RLG00000004385 RLG00000004387 RLG00000004388 RLG00000004389 RLG00000004480 RLG00000004481 RLG00000004482 RLG00000004483 RLG00000004485 RLG00000008342 RLG00000008401 RLG00000013583 RLG00000017044 RLG00000027229 RLG00000028349 RLG00000028350 RLG00000028353 RLG00000028820 RLG00000033707 RLG00000033710
rosa_multiflora Rmu_co8020340.1_g000001 Rmu_co8096640.1_g000001 Rmu_co8214930.1_g000001 Rmu_co8223272.1_g000001 Rmu_co8282535.1_g000001 Rmu_co8343567.1_g000001 Rmu_co8404191.1_g000001 Rmu_co8455157.1_g000001 Rmu_sc0000062.1_g000028 Rmu_sc0000082.1_g000091 Rmu_sc0000509.1_g000017 Rmu_sc0000775.1_g000001 Rmu_sc0000999.1_g000034 Rmu_sc0001559.1_g000004 Rmu_sc0001559.1_g000009 Rmu_sc0002164.1_g000001 Rmu_sc0002164.1_g000005 Rmu_sc0002164.1_g000007 Rmu_sc0002164.1_g000008 Rmu_sc0002164.1_g000009 Rmu_sc0002164.1_g000019 Rmu_sc0002247.1_g000009 Rmu_sc0002373.1_g000002 Rmu_sc0002373.1_g000003 Rmu_sc0002944.1_g000059 Rmu_sc0003930.1_g000004 Rmu_sc0004958.1_g000001 Rmu_sc0005197.1_g000014 Rmu_sc0005898.1_g000008 Rmu_sc0005898.1_g000009 Rmu_sc0005898.1_g000015 Rmu_sc0006059.1_g000004 Rmu_sc0006059.1_g000010 Rmu_sc0006903.1_g000007 Rmu_sc0006903.1_g000008 Rmu_sc0006968.1_g000001 Rmu_sc0011009.1_g000009 Rmu_sc0022852.1_g000002 Rmu_sc0033854.1_g000001 Rmu_ssc0000421.1_g000057 Rmu_ssc0000421.1_g000067 Rmu_ssc0000421.1_g000069 Rmu_ssc0000421.1_g000072 Rmu_ssc0000421.1_g000081 Rmu_ssc0000421.1_g000086
rosa_roxburghii Rroxscaffold_158G00443680 Rroxscaffold_158G00443710 Rroxscaffold_158G00443720 Rroxscaffold_158G00443740 Rroxscaffold_1G00034950 Rroxscaffold_1G00044240 Rroxscaffold_1G00044270 Rroxscaffold_3G00241380 Rroxscaffold_3G00247000 Rroxscaffold_3G00263120 Rroxscaffold_3G00263150 Rroxscaffold_3G00263160 Rroxscaffold_3G00263170 Rroxscaffold_3G00263180 Rroxscaffold_3G00263190 Rroxscaffold_3G00263210 Rroxscaffold_3G00263230 Rroxscaffold_3G00263260 Rroxscaffold_3G00264110 Rroxscaffold_3G00264130 Rroxscaffold_3G00264160 Rroxscaffold_3G00264180 Rroxscaffold_3G00264200 Rroxscaffold_4G00288750 Rroxscaffold_4G00303110 Rroxscaffold_4G00303120 Rroxscaffold_4G00322280 Rroxscaffold_5G00356200 Rroxscaffold_6G00399150 Rroxscaffold_6G00399290 Rroxscaffold_7G00194770
rosa_rugosa Rorug01G0225300 Rorug01G0225400 Rorug01G0225800 Rorug01G0226000 Rorug01G0339400 Rorug01G0451500 Rorug03G0196900 Rorug03G0294900 Rorug04G0107500 Rorug04G0107600 Rorug04G0129700 Rorug04G0178000 Rorug05G0144900.1 Rorug05G0145000 Rorug05G0228000 Rorug05G0228600 Rorug06G0078300 Rorug06G0508000 Rorug06G0508100 Rorug06G0508100 Rorug06G0508400 Rorug06G0513400 Rorug07G0000100 Rorug07G0000200 Rorug07G0000300 Rorug07G0000500 Rorug07G0000800
rosa_samantha Rh1BG060400 Rh1BG210300 Rh1BG210700 Rh1BG210800 Rh1BG309800 Rh1CG223800 Rh1CG224200 Rh1CG325200 Rh1DG237000 Rh1DG237400 Rh1DG341600 Rh2DG365700 Rh3AG212500 Rh3AG248400 Rh3CG239800 Rh3DG239300 Rh4AG169300 Rh4BG166200 Rh4BG240500 Rh4BG240600 Rh4DG163600 Rh5AG249600 Rh5AG249900 Rh5AG250000 Rh5CG283100 Rh5CG283200 Rh5CG283400 Rh5DG259200 Rh5DG259800 Rh6BG197700 Rh6CG197800 Rh6DG189400 Rh7AG114900 Rh7AG115000 Rh7AG115200 Rh7AG115300 Rh7AG115400 Rh7AG115500 Rh7AG123900 Rh7AG124100 Rh7AG124300 Rh7BG117200 Rh7BG117400 Rh7BG118400 Rh7BG125400 Rh7BG125600 Rh7BG125700 Rh7BG125800 Rh7BG125900 Rh7BG126000 Rh7BG126400 Rh7BG126600 Rh7BG126700 Rh7BG166200 Rh7DG118600 Rh7DG118700 Rh7DG118900 Rh7DG119000 Rh7DG119100 Rh7DG127400 Rh7DG127600 Rh7DG127700 Rh7DG127900 Rh7DG128200
rosa_wichuraiana Rw1G013270 Rw1G020790 Rw2G027890 Rw2G028040 Rw3G019240 Rw4G014070 Rw4G020540 Rw5G021320 Rw5G022970 Rw6G016920 Rw7G010020 Rw7G010040 Rw7G010580 Rw7G010590 Rw7G010600 Rw7G010610 Rw7G010620 Rw7G010630 Rw7G010640 Rw7G010690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 173
AccB1I GGYRCC 1 cut(s) 177
AciI CCGC 3 cut(s) 8, 284, 530
AclWI GGATC 1 cut(s) 489
AcsI RAATTY 2 cut(s) 84, 427
AfiI CCNNNNNNNGG 1 cut(s) 464
AgsI TTSAA 1 cut(s) 280
Alw21I GWGCWC 1 cut(s) 438
Alw44I GTGCAC 1 cut(s) 434
AlwI GGATC 1 cut(s) 489
Ama87I CYCGRG 1 cut(s) 383
ApaLI GTGCAC 1 cut(s) 434
ApeKI GCWGC 1 cut(s) 52
ApoI RAATTY 2 cut(s) 84, 427
AspA2I CCTAGG 1 cut(s) 335
AspS9I GGNCC 1 cut(s) 156
AsuC2I CCSGG 2 cut(s) 384, 385
AsuHPI GGTGA 1 cut(s) 298
AvaI CYCGRG 1 cut(s) 383
AvaII GGWCC 1 cut(s) 156
AvrII CCTAGG 1 cut(s) 335
BaeGI GKGCMC 1 cut(s) 438
BanI GGYRCC 1 cut(s) 177
BbsI GAAGAC 1 cut(s) 243
Bbv12I GWGCWC 1 cut(s) 438
BbvI GCAGC 1 cut(s) 64
BclI TGATCA 1 cut(s) 288
BcnI CCSGG 2 cut(s) 384, 385
BfaI CTAG 3 cut(s) 336, 422, 485
BisI GCNGC 1 cut(s) 53
BlnI CCTAGG 1 cut(s) 335
BlsI GCNGC 1 cut(s) 54
Bme1390I CCNGG 2 cut(s) 384, 385
Bme18I GGWCC 1 cut(s) 156
BmeT110I CYCGRG 1 cut(s) 383
BmgT120I GGNCC 1 cut(s) 156
BmiI GGNNCC 1 cut(s) 179
BmrFI CCNGG 2 cut(s) 384, 385
BmsI GCATC 2 cut(s) 258, 319
BpiI GAAGAC 1 cut(s) 243
BpuMI CCSGG 2 cut(s) 384, 385
BsaJI CCNNGG 3 cut(s) 159, 335, 383
BsaXI ACNNNNNCTCC 2 cut(s) 364, 394
Bsc4I CCNNNNNNNGG 1 cut(s) 464
Bse1I ACTGG 1 cut(s) 462
Bse3DI GCAATG 1 cut(s) 452
BseDI CCNNGG 3 cut(s) 159, 335, 383
BseGI GGATG 3 cut(s) 259, 310, 381
BseLI CCNNNNNNNGG 1 cut(s) 464
BseMI GCAATG 1 cut(s) 452
BseMII CTCAG 1 cut(s) 156
BseNI ACTGG 1 cut(s) 462
BseSI GKGCMC 1 cut(s) 438
BseXI GCAGC 1 cut(s) 64
BshNI GGYRCC 1 cut(s) 177
BsiHKAI GWGCWC 1 cut(s) 438
BsiHKCI CYCGRG 1 cut(s) 383
BsiSI CCGG 1 cut(s) 384
BslFI GGGAC 1 cut(s) 366
BslI CCNNNNNNNGG 1 cut(s) 464
BsmFI GGGAC 1 cut(s) 366
BsoBI CYCGRG 1 cut(s) 383
Bsp1286I GDGCHC 1 cut(s) 438
Bsp143I GATC 3 cut(s) 261, 288, 481
Bsp19I CCATGG 1 cut(s) 159
BspACI CCGC 3 cut(s) 8, 284, 530
BspCNI CTCAG 1 cut(s) 157
BspHI TCATGA 1 cut(s) 189
BspLI GGNNCC 1 cut(s) 179
BspPI GGATC 1 cut(s) 489
BspT107I GGYRCC 1 cut(s) 177
BsrDI GCAATG 1 cut(s) 452
BsrI ACTGG 1 cut(s) 462
BssECI CCNNGG 3 cut(s) 159, 335, 383
BssMI GATC 3 cut(s) 261, 288, 481
BssT1I CCWWGG 2 cut(s) 159, 335
Bst6I CTCTTC 1 cut(s) 306
BstC8I GCNNGC 3 cut(s) 204, 308, 459
BstDEI CTNAG 1 cut(s) 165
BstDSI CCRYGG 1 cut(s) 159
BstF5I GGATG 3 cut(s) 259, 310, 381
BstKTI GATC 3 cut(s) 264, 291, 484
BstMBI GATC 3 cut(s) 261, 288, 481
BstMWI GCNNNNNNNGC 1 cut(s) 331
BstSCI CCNGG 2 cut(s) 382, 383
BstSLI GKGCMC 1 cut(s) 438
BstV1I GCAGC 1 cut(s) 64
BstV2I GAAGAC 1 cut(s) 243
BstX2I RGATCY 1 cut(s) 481
BstYI RGATCY 1 cut(s) 481
BtgI CCRYGG 1 cut(s) 159
BtsCI GGATG 3 cut(s) 259, 310, 381
BtsIMutI CAGTG 1 cut(s) 469
Cac8I GCNNGC 3 cut(s) 204, 308, 459
CciI TCATGA 1 cut(s) 189
Cfr13I GGNCC 1 cut(s) 156
Cfr9I CCCGGG 1 cut(s) 383
CviAII CATG 4 cut(s) 91, 160, 190, 490
CviJI RGCY 5 cut(s) 164, 206, 218, 298, 539
CviKI_1 RGCY 5 cut(s) 164, 206, 218, 298, 539
DdeI CTNAG 1 cut(s) 165
DpnI GATC 3 cut(s) 263, 290, 483
DpnII GATC 3 cut(s) 261, 288, 481
Eam1104I CTCTTC 1 cut(s) 306
EarI CTCTTC 1 cut(s) 306
EciI GGCGGA 1 cut(s) 23
Eco130I CCWWGG 2 cut(s) 159, 335
Eco32I GATATC 1 cut(s) 342
Eco47I GGWCC 1 cut(s) 156
Eco88I CYCGRG 1 cut(s) 383
EcoRV GATATC 1 cut(s) 342
EcoT14I CCWWGG 2 cut(s) 159, 335
ErhI CCWWGG 2 cut(s) 159, 335
FaeI CATG 4 cut(s) 94, 163, 193, 493
FalI AAGNNNNNCTT 2 cut(s) 285, 317
FaqI GGGAC 1 cut(s) 366
FatI CATG 4 cut(s) 90, 159, 189, 489
FauI CCCGC 1 cut(s) 537
FbaI TGATCA 1 cut(s) 288
Fnu4HI GCNGC 1 cut(s) 53
FokI GGATG 3 cut(s) 266, 297, 388
Fsp4HI GCNGC 1 cut(s) 53
FspBI CTAG 3 cut(s) 336, 422, 485
GluI GCNGC 1 cut(s) 53
HapII CCGG 1 cut(s) 384
Hin1II CATG 4 cut(s) 94, 163, 193, 493
HincII GTYRAC 1 cut(s) 223
HindII GTYRAC 1 cut(s) 223
HinfI GANTC 2 cut(s) 388, 497
HpaII CCGG 1 cut(s) 384
HphI GGTGA 1 cut(s) 298
Hpy166II GTNNAC 3 cut(s) 31, 223, 436
Hpy188III TCNNGA 3 cut(s) 190, 265, 485
Hpy8I GTNNAC 3 cut(s) 31, 223, 436
HpyAV CCTTC 2 cut(s) 88, 274
HpyCH4IV ACGT 1 cut(s) 33
HpyCH4V TGCA 5 cut(s) 90, 202, 271, 310, 436
HpyF10VI GCNNNNNNNGC 1 cut(s) 331
HpyF3I CTNAG 1 cut(s) 165
HpySE526I ACGT 1 cut(s) 33
Hsp92II CATG 4 cut(s) 94, 163, 193, 493
Ksp22I TGATCA 1 cut(s) 288
Kzo9I GATC 3 cut(s) 261, 288, 481
LpnPI CCDG 6 cut(s) 108, 188, 397, 471, 475, 489
Lsp1109I GCAGC 1 cut(s) 64
LweI GCATC 2 cut(s) 258, 319
MaeI CTAG 3 cut(s) 336, 422, 485
MaeII ACGT 1 cut(s) 33
MalI GATC 3 cut(s) 263, 290, 483
MboI GATC 3 cut(s) 261, 288, 481
MboII GAAGA 2 cut(s) 248, 293
MflI RGATCY 1 cut(s) 481
MhlI GDGCHC 1 cut(s) 438
MluCI AATT 6 cut(s) 84, 197, 210, 414, 427, 513
MnlI CCTC 7 cut(s) 4, 244, 309, 324, 366, 403, 472
MseI TTAA 2 cut(s) 245, 534
MspI CCGG 1 cut(s) 384
MspR9I CCNGG 2 cut(s) 384, 385
MwoI GCNNNNNNNGC 1 cut(s) 331
NciI CCSGG 2 cut(s) 384, 385
NcoI CCATGG 1 cut(s) 159
NdeII GATC 3 cut(s) 261, 288, 481
NlaIII CATG 4 cut(s) 94, 163, 193, 493
NlaIV GGNNCC 1 cut(s) 179
PagI TCATGA 1 cut(s) 189
PfeI GAWTC 2 cut(s) 388, 497
PkrI GCNGC 1 cut(s) 54
PsiI TTATAA 1 cut(s) 173
PspN4I GGNNCC 1 cut(s) 179
PspPI GGNCC 1 cut(s) 156
PsuI RGATCY 1 cut(s) 481
SaqAI TTAA 2 cut(s) 245, 534
SatI GCNGC 1 cut(s) 53
Sau3AI GATC 3 cut(s) 261, 288, 481
Sau96I GGNCC 1 cut(s) 156
ScrFI CCNGG 2 cut(s) 384, 385
SduI GDGCHC 1 cut(s) 438
SetI ASST 4 cut(s) 36, 142, 189, 232
SfaNI GCATC 2 cut(s) 258, 319
SinI GGWCC 1 cut(s) 156
SmaI CCCGGG 1 cut(s) 385
Sse9I AATT 6 cut(s) 84, 197, 210, 414, 427, 513
SsiI CCGC 3 cut(s) 8, 284, 530
SspMI CTAG 3 cut(s) 336, 422, 485
StyD4I CCNGG 2 cut(s) 382, 383
StyI CCWWGG 2 cut(s) 159, 335
TaiI ACGT 1 cut(s) 36
TaqI TCGA 2 cut(s) 264, 344
TasI AATT 6 cut(s) 84, 197, 210, 414, 427, 513
TfiI GAWTC 2 cut(s) 388, 497
Tru1I TTAA 2 cut(s) 245, 534
Tru9I TTAA 2 cut(s) 245, 534
TscAI CASTG 1 cut(s) 469
TseI GCWGC 1 cut(s) 52
TspDTI ATGAA 4 cut(s) 17, 107, 506, 546
TspMI CCCGGG 1 cut(s) 383
TspRI CASTG 1 cut(s) 469
VneI GTGCAC 1 cut(s) 434
VpaK11BI GGWCC 1 cut(s) 156
XapI RAATTY 2 cut(s) 84, 427
XbaI TCTAGA 1 cut(s) 484
XmaI CCCGGG 1 cut(s) 383
XmaJI CCTAGG 1 cut(s) 335
XspI CTAG 3 cut(s) 336, 422, 485
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.