Rmu_sc0001559.1_g000004

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001559.1
OG0000061
Physical Location & Seq
Forward (+)
8100 .. 12339
4240 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001559.1_g000004.1.cds

Sequence Viewer

Length: 2031 bp
atgttgaacctgtttgtatttgctgttcccttactcttattcacaatcttcctcatcaaatggttttccactacaaacaagcacaatcatttacctccatcaccaccaaggctcccaatactaggaaacctccaccaacttggcaagcgccctcaccgatccctccaacaactagctcagcaccatggtgaactcataatgcttcatttcggttccagacctgtgctcatagtttcatctgcagatgctgctcgcgaaatcatgaaaacaaatgatctcatcttctctaacaaacccaaattaacgattattgatagacttctgtacgaaggcaaggatgtgtccacagctccttacggtgagtattggaggcaagtaagaagcatatgcgtgctccagcttttaagtaacaaaaaggttcagtctttccgaggagttagacaagaagaaatatccttgctgattgagaatgtcaaacagtcgtctatgttgtcactgccagtcaatcttagcgaattgttttctatgcttactaatgatgtgatttgtagggtggcttttgggaggaagtatagtggtggtgaaggtgcaatgaagttcaagaagttgcttggggaatttatggaggtgttgggtggtttttgtgttggagattttattccatggctttcttgggttagtcgctttagtgggttagatgcaagagtggagaaagtttttaaagaatttgatggatttcttgatacagtacttgaggatcatatggttaatcttagcacgaagggagatatctgtggtatagaaggtgaagatagaaaggattttgtggatgtcctgcttgaagttcaaaagaataacatcactggctcttccatagatcgagatgggattaaagctgtcatcttggatatgtttgcgggtggaactgatacaacctccacagttctagagtgggcgatgactgaactcataaggcatcccagagtgatgaaaagactgcaaaatgaggttatgggaattgctaatggaaaacaagacataacagaaagtgacttggacaaaatgccatacttgaaagctgtgatcaaagaaacactaaggctgtatcctccaataccgttgttgagcattcgagaatcaacccaagatgttaaagtaaagggctatgacatagctgcaagaaccatggtcctagtcaatgcctggacaattggaagagacccttctctgtgggatgaaccggaggagtttcaacctgatagatttatgaattcttcggtagacttcaaagggcaggacttccaattaatcccatttggagctggcagaagaggttgcccgggaatcttatttgccattaccactaatgagcttgtgttagcaaatcttgtgcacaagtttgagtgggcattgcctagtggagctacagctgaggatatgaacatgacagaatgcaatggtgttgtcatccacaaagaagttcctcttatagttatggcagcgccaagccatctcggcctgcctacctgccaacgcgcccccgcgctcagttcgctgccttgcagccccgcgcccgtgcgtccaccccacgctgcccctgcagcgtccctgcttccccgcgcacacctgcgcacgctgctgccccgcctacgcacccgtgcacctgcagccctacaccactgctgctgccccgcattcgctgcacgcttctactcggattgcttcgctccatcacgcctgcatcgacacgcgcgtgatccaaaaccaaaaagtaagtatccaaaagagatgtcgaaacttgactttcctgcacttacctcaactggctcggaatatcatagttgggccacggatgttgagcaccatctcacttcaaaagggatcctacccttaattcaagctcctaatcctactctcatatttgagcgtacggctacgaacaatgccaccgccctcatcttgatgaggcgccacatggataaatcactccgactggagtacatggcaatcaaggatgctagagaattatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00140 ko00590 ko00591 ko01100 ko04212 ko04726 ko04750 ko04913 ko04917 ko04927 ko04934 map00140 map00590 map00591 map01100 map04212 map04726 map04750 map04913 map04917 map04927 map04934
Pfam Domains
Protein Families
p450

Protein Analysis

676

Amino Acids

75.83

Weight (kDa)

8.76

Isoelectric Point (pI)

40.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000061)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G48270 AT3G48280 AT3G48290 AT3G48290 AT3G48300 AT3G48300 AT3G48310 AT3G48320 AT4G20235 AT4G20235
fragaria_vesca FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g36190 FvH4_3g14160 FvH4_3g14210 FvH4_3g14260 FvH4_3g14260 FvH4_3g21100 FvH4_3g21380 FvH4_4g24460 FvH4_4g24500 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06572 FvH4_5g06573 FvH4_5g06574 FvH4_5g06575 FvH4_5g06576 FvH4_5g06577 FvH4_5g06577 FvH4_5g07540 FvH4_5g07550 FvH4_5g07560 FvH4_5g07570 FvH4_5g29491 FvH4_5g29492 FvH4_6g23870 FvH4_6g23880 FvH4_6g26870 FvH4_7g11861 FvH4_7g11862 FvH4_7g13050 FvH4_7g13060 FvH4_7g13080 FvH4_7g13080 FvH4_7g22630 FvH4_7g22650 FvH4_7g22651 FvH4_7g23020
malus_domestica MD03G1207400.v1.1 MD03G1214800.v1.1 MD03G1218500.v1.1 MD06G1163100.v1.1 MD06G1163300.v1.1 MD06G1163400.v1.1 MD06G1163500.v1.1 MD06G1163600.v1.1 MD06G1163800.v1.1 MD06G1164000.v1.1 MD06G1164100.v1.1 MD06G1224400.v1.1 MD08G1222800.v1.1 MD08G1222900.v1.1 MD08G1223100.v1.1 MD11G1091500.v1.1 MD11G1091800.v1.1 MD14G1163200.v1.1 MD14G1169000.v1.1 MD15G1207200.v1.1 MD15G1207300.v1.1 MD17G1259400.v1.1
prunus_persica Prupe.4G198100_v2.0.a1 Prupe.4G199100_v2.0.a1 Prupe.4G199400_v2.0.a1 Prupe.4G199800_v2.0.a1 Prupe.4G225200_v2.0.a1 Prupe.4G239100_v2.0.a1 Prupe.5G156600_v2.0.a1 Prupe.5G163500_v2.0.a1 Prupe.7G209500_v2.0.a1 Prupe.I003400_v2.0.a1
pyrus_communis pycom03g16340 pycom06g14600 pycom06g14610 pycom06g14620 pycom06g14630 pycom06g14640 pycom06g14670 pycom06g14690 pycom08g19390 pycom08g19400 pycom08g19410 pycom11g07600 pycom11g07610 pycom11g07620 pycom11g07660 pycom14g13580 pycom14g14080 pycom14g14100 pycom14g14110 pycom15g18380 pycom17g26080
rosa_chinensis RchiOBHm_Chr1g0339441 RchiOBHm_Chr1g0339451 RchiOBHm_Chr1g0352191 RchiOBHm_Chr1g0368221 RchiOBHm_Chr2g0129531 RchiOBHm_Chr2g0129541 RchiOBHm_Chr3g0477631 RchiOBHm_Chr3g0482551 RchiOBHm_Chr3g0482561 RchiOBHm_Chr3g0482571 RchiOBHm_Chr4g0411601 RchiOBHm_Chr4g0422181 RchiOBHm_Chr5g0036661 RchiOBHm_Chr5g0036731 RchiOBHm_Chr6g0274021 RchiOBHm_Chr7g0190921 RchiOBHm_Chr7g0190931 RchiOBHm_Chr7g0190941 RchiOBHm_Chr7g0190951 RchiOBHm_Chr7g0190961 RchiOBHm_Chr7g0190971 RchiOBHm_Chr7g0191001 RchiOBHm_Chr7g0191011 RchiOBHm_Chr7g0191021 RchiOBHm_Chr7g0192181 RchiOBHm_Chr7g0192191 RchiOBHm_Chr7g0192201 RchiOBHm_Chr7g0192221 RchiOBHm_Chr7g0192231 RchiOBHm_Chr7g0192281 RchiOBHm_Chr7g0197311
rosa_laevigata RLG00000003942 RLG00000004345 RLG00000004379 RLG00000004383 RLG00000004384 RLG00000004385 RLG00000004387 RLG00000004388 RLG00000004389 RLG00000004480 RLG00000004481 RLG00000004482 RLG00000004483 RLG00000004485 RLG00000008342 RLG00000008401 RLG00000013583 RLG00000017044 RLG00000027229 RLG00000028349 RLG00000028350 RLG00000028353 RLG00000028820 RLG00000033707 RLG00000033710
rosa_multiflora Rmu_co8020340.1_g000001 Rmu_co8096640.1_g000001 Rmu_co8214930.1_g000001 Rmu_co8223272.1_g000001 Rmu_co8282535.1_g000001 Rmu_co8343567.1_g000001 Rmu_co8404191.1_g000001 Rmu_co8455157.1_g000001 Rmu_sc0000062.1_g000028 Rmu_sc0000082.1_g000091 Rmu_sc0000509.1_g000017 Rmu_sc0000775.1_g000001 Rmu_sc0000999.1_g000034 Rmu_sc0001559.1_g000004 Rmu_sc0001559.1_g000009 Rmu_sc0002164.1_g000001 Rmu_sc0002164.1_g000005 Rmu_sc0002164.1_g000007 Rmu_sc0002164.1_g000008 Rmu_sc0002164.1_g000009 Rmu_sc0002164.1_g000019 Rmu_sc0002247.1_g000009 Rmu_sc0002373.1_g000002 Rmu_sc0002373.1_g000003 Rmu_sc0002944.1_g000059 Rmu_sc0003930.1_g000004 Rmu_sc0004958.1_g000001 Rmu_sc0005197.1_g000014 Rmu_sc0005898.1_g000008 Rmu_sc0005898.1_g000009 Rmu_sc0005898.1_g000015 Rmu_sc0006059.1_g000004 Rmu_sc0006059.1_g000010 Rmu_sc0006903.1_g000007 Rmu_sc0006903.1_g000008 Rmu_sc0006968.1_g000001 Rmu_sc0011009.1_g000009 Rmu_sc0022852.1_g000002 Rmu_sc0033854.1_g000001 Rmu_ssc0000421.1_g000057 Rmu_ssc0000421.1_g000067 Rmu_ssc0000421.1_g000069 Rmu_ssc0000421.1_g000072 Rmu_ssc0000421.1_g000081 Rmu_ssc0000421.1_g000086
rosa_roxburghii Rroxscaffold_158G00443680 Rroxscaffold_158G00443710 Rroxscaffold_158G00443720 Rroxscaffold_158G00443740 Rroxscaffold_1G00034950 Rroxscaffold_1G00044240 Rroxscaffold_1G00044270 Rroxscaffold_3G00241380 Rroxscaffold_3G00247000 Rroxscaffold_3G00263120 Rroxscaffold_3G00263150 Rroxscaffold_3G00263160 Rroxscaffold_3G00263170 Rroxscaffold_3G00263180 Rroxscaffold_3G00263190 Rroxscaffold_3G00263210 Rroxscaffold_3G00263230 Rroxscaffold_3G00263260 Rroxscaffold_3G00264110 Rroxscaffold_3G00264130 Rroxscaffold_3G00264160 Rroxscaffold_3G00264180 Rroxscaffold_3G00264200 Rroxscaffold_4G00288750 Rroxscaffold_4G00303110 Rroxscaffold_4G00303120 Rroxscaffold_4G00322280 Rroxscaffold_5G00356200 Rroxscaffold_6G00399150 Rroxscaffold_6G00399290 Rroxscaffold_7G00194770
rosa_rugosa Rorug01G0225300 Rorug01G0225400 Rorug01G0225800 Rorug01G0226000 Rorug01G0339400 Rorug01G0451500 Rorug03G0196900 Rorug03G0294900 Rorug04G0107500 Rorug04G0107600 Rorug04G0129700 Rorug04G0178000 Rorug05G0144900.1 Rorug05G0145000 Rorug05G0228000 Rorug05G0228600 Rorug06G0078300 Rorug06G0508000 Rorug06G0508100 Rorug06G0508100 Rorug06G0508400 Rorug06G0513400 Rorug07G0000100 Rorug07G0000200 Rorug07G0000300 Rorug07G0000500 Rorug07G0000800
rosa_samantha Rh1BG060400 Rh1BG210300 Rh1BG210700 Rh1BG210800 Rh1BG309800 Rh1CG223800 Rh1CG224200 Rh1CG325200 Rh1DG237000 Rh1DG237400 Rh1DG341600 Rh2DG365700 Rh3AG212500 Rh3AG248400 Rh3CG239800 Rh3DG239300 Rh4AG169300 Rh4BG166200 Rh4BG240500 Rh4BG240600 Rh4DG163600 Rh5AG249600 Rh5AG249900 Rh5AG250000 Rh5CG283100 Rh5CG283200 Rh5CG283400 Rh5DG259200 Rh5DG259800 Rh6BG197700 Rh6CG197800 Rh6DG189400 Rh7AG114900 Rh7AG115000 Rh7AG115200 Rh7AG115300 Rh7AG115400 Rh7AG115500 Rh7AG123900 Rh7AG124100 Rh7AG124300 Rh7BG117200 Rh7BG117400 Rh7BG118400 Rh7BG125400 Rh7BG125600 Rh7BG125700 Rh7BG125800 Rh7BG125900 Rh7BG126000 Rh7BG126400 Rh7BG126600 Rh7BG126700 Rh7BG166200 Rh7DG118600 Rh7DG118700 Rh7DG118900 Rh7DG119000 Rh7DG119100 Rh7DG127400 Rh7DG127600 Rh7DG127700 Rh7DG127900 Rh7DG128200
rosa_wichuraiana Rw1G013270 Rw1G020790 Rw2G027890 Rw2G028040 Rw3G019240 Rw4G014070 Rw4G020540 Rw5G021320 Rw5G022970 Rw6G016920 Rw7G010020 Rw7G010040 Rw7G010580 Rw7G010590 Rw7G010600 Rw7G010610 Rw7G010620 Rw7G010630 Rw7G010640 Rw7G010690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1635, 1672
Acc16I TGCGCA 1 cut(s) 1631
Acc36I ACCTGC 3 cut(s) 1535, 1635, 1672
AccB1I GGYRCC 1 cut(s) 1968
AccI GTMKAC 1 cut(s) 1281
AccII CGCG 7 cut(s) 255, 1536, 1544, 1571, 1620, 1751, 1753
AciI CCGC 7 cut(s) 917, 1542, 1569, 1618, 1645, 1692, 1950
AclWI GGATC 5 cut(s) 153, 765, 1751, 1876, 1889
AcsI RAATTY 3 cut(s) 617, 725, 1270
AcyI GRCGYC 1 cut(s) 1969
AfaI GTAC 4 cut(s) 326, 750, 1930, 2000
AfiI CCNNNNNNNGG 1 cut(s) 122
AgsI TTSAA 9 cut(s) 7, 601, 842, 848, 1075, 1253, 1288, 1875, 1898
AjnI CCWGG 1 cut(s) 1202
AleI CACNNNNGTG 2 cut(s) 186, 1752
Alw21I GWGCWC 5 cut(s) 228, 396, 1395, 1663, 1863
Alw26I GTCTC 1 cut(s) 1212
Alw44I GTGCAC 2 cut(s) 1391, 1659
AlwI GGATC 5 cut(s) 153, 765, 1751, 1876, 1889
AlwNI CAGNNNCTG 1 cut(s) 248
Ama87I CYCGRG 1 cut(s) 1339
AoxI GGCC 2 cut(s) 1516, 1845
ApaLI GTGCAC 2 cut(s) 1391, 1659
ApoI RAATTY 3 cut(s) 617, 725, 1270
ArsI GACNNNNNNTTYG 2 cut(s) 1775, 1807
AseI ATTAAT 1 cut(s) 1307
AspLEI GCGC 9 cut(s) 150, 1504, 1538, 1546, 1573, 1622, 1632, 1753, 1971
AspS9I GGNCC 2 cut(s) 1189, 1845
AsuC2I CCSGG 2 cut(s) 1340, 1341
AsuHPI GGTGA 6 cut(s) 93, 146, 200, 371, 593, 818
AvaI CYCGRG 1 cut(s) 1339
AvaII GGWCC 1 cut(s) 1189
BaeGI GKGCMC 2 cut(s) 1395, 1663
BamHI GGATCC 1 cut(s) 1881
BanI GGYRCC 1 cut(s) 1968
Bbv12I GWGCWC 5 cut(s) 228, 396, 1395, 1663, 1863
BbvCI CCTCAGC 1 cut(s) 1431
BccI CCATC 6 cut(s) 106, 725, 878, 1518, 1738, 1872
BceAI ACGGC 1 cut(s) 1947
BciT130I CCWGG 1 cut(s) 1204
BciVI GTATCC 2 cut(s) 1116, 1788
BclI TGATCA 1 cut(s) 1083
BcnI CCSGG 2 cut(s) 1340, 1341
BcoDI GTCTC 1 cut(s) 1212
BfaI CTAG 6 cut(s) 122, 173, 947, 1193, 1416, 2019
BfmI CTRYAG 4 cut(s) 240, 1425, 1599, 1665
BfoI RGCGCY 3 cut(s) 151, 1505, 1972
BfuAI ACCTGC 3 cut(s) 1535, 1635, 1672
BfuI GTATCC 2 cut(s) 1116, 1788
BglI GCCNNNNNGGC 1 cut(s) 1515
BlpI GCTNAGC 1 cut(s) 177
BmcAI AGTACT 1 cut(s) 750
Bme1390I CCNGG 3 cut(s) 1204, 1340, 1341
Bme18I GGWCC 1 cut(s) 1189
BmeT110I CYCGRG 1 cut(s) 1339
BmgT120I GGNCC 2 cut(s) 1189, 1845
BmiI GGNNCC 4 cut(s) 113, 214, 1883, 1970
BmrFI CCNGG 3 cut(s) 1204, 1340, 1341
BmsI GCATC 5 cut(s) 235, 688, 985, 1750, 2005
BpmI CTGGAG 2 cut(s) 380, 2015
Bpu10I CCTNAGC 1 cut(s) 1431
Bpu1102I GCTNAGC 1 cut(s) 177
BpuEI CTTGAG 1 cut(s) 773
BpuMI CCSGG 2 cut(s) 1340, 1341
BsaHI GRCGYC 1 cut(s) 1969
BsaI GGTCTC 1 cut(s) 1212
BsaJI CCNNGG 7 cut(s) 107, 184, 430, 662, 1185, 1339, 1848
BsaWI WCCGGW 1 cut(s) 1240
BsaXI ACNNNNNCTCC 2 cut(s) 96, 126
Bsc4I CCNNNNNNNGG 1 cut(s) 122
Bse1I ACTGG 4 cut(s) 500, 868, 1828, 1998
Bse3DI GCAATG 3 cut(s) 597, 1409, 1462
BseBI CCWGG 1 cut(s) 1204
BseDI CCNNGG 7 cut(s) 107, 184, 430, 662, 1185, 1339, 1848
BseGI GGATG 7 cut(s) 343, 835, 976, 1240, 1467, 1858, 2020
BseLI CCNNNNNNNGG 1 cut(s) 122
BseMI GCAATG 3 cut(s) 597, 1409, 1462
BseMII CTCAG 3 cut(s) 191, 1422, 1561
BseNI ACTGG 4 cut(s) 500, 868, 1828, 1998
BseRI GAGGAG 2 cut(s) 447, 1259
BseSI GKGCMC 2 cut(s) 1395, 1663
BsgI GTGCAG 2 cut(s) 1686, 1794
Bsh1236I CGCG 7 cut(s) 255, 1536, 1544, 1571, 1620, 1751, 1753
BshFI GGCC 2 cut(s) 1518, 1847
BshNI GGYRCC 1 cut(s) 1968
BsiHKAI GWGCWC 5 cut(s) 228, 396, 1395, 1663, 1863
BsiHKCI CYCGRG 1 cut(s) 1339
BsiSI CCGG 2 cut(s) 1241, 1340
BsiWI CGTACG 1 cut(s) 1928
BslFI GGGAC 1 cut(s) 1591
BslI CCNNNNNNNGG 1 cut(s) 122
BsmAI GTCTC 1 cut(s) 1212
BsmFI GGGAC 1 cut(s) 1591
BsmI GAATGC 3 cut(s) 1128, 1457, 1694
BsnI GGCC 2 cut(s) 1518, 1847
Bso31I GGTCTC 1 cut(s) 1212
BsoBI CYCGRG 1 cut(s) 1339
Bsp1286I GDGCHC 5 cut(s) 228, 396, 1395, 1663, 1863
Bsp143I GATC 7 cut(s) 158, 274, 757, 877, 1083, 1756, 1881
Bsp1720I GCTNAGC 1 cut(s) 177
Bsp19I CCATGG 3 cut(s) 184, 662, 1185
Bsp68I TCGCGA 1 cut(s) 255
BspACI CCGC 7 cut(s) 917, 1542, 1569, 1618, 1645, 1692, 1950
BspANI GGCC 2 cut(s) 1518, 1847
BspCNI CTCAG 3 cut(s) 190, 1423, 1560
BspFNI CGCG 7 cut(s) 255, 1536, 1544, 1571, 1620, 1751, 1753
BspHI TCATGA 1 cut(s) 261
BspLI GGNNCC 4 cut(s) 113, 214, 1883, 1970
BspMAI CTGCAG 3 cut(s) 244, 1603, 1669
BspMI ACCTGC 3 cut(s) 1535, 1635, 1672
BspPI GGATC 5 cut(s) 153, 765, 1751, 1876, 1889
BspQI GCTCTTC 1 cut(s) 874
BspT107I GGYRCC 1 cut(s) 1968
BspTNI GGTCTC 1 cut(s) 1212
BsrDI GCAATG 3 cut(s) 597, 1409, 1462
BsrI ACTGG 4 cut(s) 500, 868, 1828, 1998
BssECI CCNNGG 7 cut(s) 107, 184, 430, 662, 1185, 1339, 1848
BssMI GATC 7 cut(s) 158, 274, 757, 877, 1083, 1756, 1881
BssNI GRCGYC 1 cut(s) 1969
BssT1I CCWWGG 4 cut(s) 107, 184, 662, 1185
Bst2UI CCWGG 1 cut(s) 1204
Bst4CI ACNGT 5 cut(s) 359, 480, 748, 943, 1119
Bst6I CTCTTC 3 cut(s) 874, 1210, 1324
BstACI GRCGYC 1 cut(s) 1969
BstAPI GCANNNNNTGC 2 cut(s) 248, 1700
BstC8I GCNNGC 8 cut(s) 146, 253, 392, 1324, 1520, 1634, 1705, 1739
BstDEI CTNAG 6 cut(s) 177, 509, 773, 1097, 1431, 1547
BstDSI CCRYGG 4 cut(s) 184, 662, 1185, 1848
BstF5I GGATG 7 cut(s) 343, 835, 976, 1240, 1467, 1858, 2020
BstFNI CGCG 7 cut(s) 255, 1536, 1544, 1571, 1620, 1751, 1753
BstH2I RGCGCY 3 cut(s) 151, 1505, 1972
BstHHI GCGC 9 cut(s) 150, 1504, 1538, 1546, 1573, 1622, 1632, 1753, 1971
BstKTI GATC 7 cut(s) 161, 277, 760, 880, 1086, 1759, 1884
BstMAI GTCTC 1 cut(s) 1212
BstMBI GATC 7 cut(s) 158, 274, 757, 877, 1083, 1756, 1881
BstMWI GCNNNNNNNGC 8 cut(s) 248, 1515, 1552, 1598, 1601, 1636, 1667, 1700
BstNI CCWGG 1 cut(s) 1204
BstSCI CCNGG 3 cut(s) 1202, 1338, 1339
BstSFI CTRYAG 4 cut(s) 240, 1425, 1599, 1665
BstSLI GKGCMC 2 cut(s) 1395, 1663
BstUI CGCG 7 cut(s) 255, 1536, 1544, 1571, 1620, 1751, 1753
BstX2I RGATCY 1 cut(s) 1881
BstXI CCANNNNNNTGG 1 cut(s) 140
BstYI RGATCY 1 cut(s) 1881
BsuI GTATCC 2 cut(s) 1116, 1788
BsuRI GGCC 2 cut(s) 1518, 1847
BtgI CCRYGG 4 cut(s) 184, 662, 1185, 1848
BtgZI GCGATG 1 cut(s) 971
BtsCI GGATG 7 cut(s) 343, 835, 976, 1240, 1467, 1858, 2020
BtsI GCAGTG 2 cut(s) 494, 1678
BtsIMutI CAGTG 3 cut(s) 494, 861, 1678
BtuMI TCGCGA 1 cut(s) 255
BveI ACCTGC 3 cut(s) 1535, 1635, 1672
Cac8I GCNNGC 8 cut(s) 146, 253, 392, 1324, 1520, 1634, 1705, 1739
CaiI CAGNNNCTG 1 cut(s) 248
CciI TCATGA 1 cut(s) 261
CfoI GCGC 9 cut(s) 150, 1504, 1538, 1546, 1573, 1622, 1632, 1753, 1971
Cfr13I GGNCC 2 cut(s) 1189, 1845
Cfr9I CCCGGG 1 cut(s) 1339
CseI GACGC 2 cut(s) 1568, 1593
Csp6I GTAC 4 cut(s) 325, 749, 1929, 1999
CspCI CAANNNNNGTGG 2 cut(s) 1837, 1872
CviAII CATG 7 cut(s) 185, 262, 663, 1186, 1444, 1975, 2002
CviQI GTAC 4 cut(s) 325, 749, 1929, 1999
DdeI CTNAG 6 cut(s) 177, 509, 773, 1097, 1431, 1547
DinI GGCGCC 1 cut(s) 1970
DpnI GATC 7 cut(s) 160, 276, 759, 879, 1085, 1758, 1883
DpnII GATC 7 cut(s) 158, 274, 757, 877, 1083, 1756, 1881
DraI TTTAAA 1 cut(s) 721
Eam1104I CTCTTC 3 cut(s) 874, 1210, 1324
EarI CTCTTC 3 cut(s) 874, 1210, 1324
Eco130I CCWWGG 4 cut(s) 107, 184, 662, 1185
Eco31I GGTCTC 1 cut(s) 1212
Eco32I GATATC 1 cut(s) 790
Eco47I GGWCC 1 cut(s) 1189
Eco88I CYCGRG 1 cut(s) 1339
EcoRI GAATTC 1 cut(s) 1270
EcoRII CCWGG 1 cut(s) 1202
EcoRV GATATC 1 cut(s) 790
EcoT14I CCWWGG 4 cut(s) 107, 184, 662, 1185
EgeI GGCGCC 1 cut(s) 1970
EheI GGCGCC 1 cut(s) 1970
ErhI CCWWGG 4 cut(s) 107, 184, 662, 1185
FaeI CATG 7 cut(s) 188, 265, 666, 1189, 1447, 1978, 2005
FalI AAGNNNNNCTT 4 cut(s) 1207, 1239, 1470, 1502
FaqI GGGAC 1 cut(s) 1591
FatI CATG 7 cut(s) 184, 261, 662, 1185, 1443, 1974, 2001
FauI CCCGC 6 cut(s) 910, 1549, 1576, 1625, 1652, 1699
FauNDI CATATG 2 cut(s) 386, 762
FbaI TGATCA 1 cut(s) 1083
FblI GTMKAC 1 cut(s) 1281
FokI GGATG 7 cut(s) 350, 842, 963, 1247, 1454, 1865, 2027
FspBI CTAG 6 cut(s) 122, 173, 947, 1193, 1416, 2019
FspI TGCGCA 1 cut(s) 1631
GlaI GCGC 9 cut(s) 149, 1503, 1537, 1545, 1572, 1621, 1631, 1752, 1970
GsuI CTGGAG 2 cut(s) 380, 2015
HaeII RGCGCY 3 cut(s) 151, 1505, 1972
HaeIII GGCC 2 cut(s) 1518, 1847
HapII CCGG 2 cut(s) 1241, 1340
HgaI GACGC 2 cut(s) 1568, 1593
HhaI GCGC 9 cut(s) 150, 1504, 1538, 1546, 1573, 1622, 1632, 1753, 1971
Hin1I GRCGYC 1 cut(s) 1969
Hin1II CATG 7 cut(s) 188, 265, 666, 1189, 1447, 1978, 2005
Hin6I GCGC 9 cut(s) 148, 1502, 1536, 1544, 1571, 1620, 1630, 1751, 1969
HinP1I GCGC 9 cut(s) 148, 1502, 1536, 1544, 1571, 1620, 1630, 1751, 1969
HinfI GANTC 2 cut(s) 1136, 1344
HpaII CCGG 2 cut(s) 1241, 1340
HphI GGTGA 6 cut(s) 93, 146, 200, 371, 593, 818
Hpy166II GTNNAC 6 cut(s) 191, 345, 1282, 1393, 1583, 1661
Hpy188I TCNGA 4 cut(s) 431, 1717, 1831, 1991
Hpy188III TCNNGA 9 cut(s) 216, 254, 262, 601, 740, 881, 947, 1133, 1960
Hpy8I GTNNAC 6 cut(s) 191, 345, 1282, 1393, 1583, 1661
HpyAV CCTTC 5 cut(s) 323, 578, 775, 797, 1233
HpyCH4III ACNGT 5 cut(s) 359, 480, 748, 943, 1119
HpyF10VI GCNNNNNNNGC 8 cut(s) 248, 1515, 1552, 1598, 1601, 1636, 1667, 1700
HpyF3I CTNAG 6 cut(s) 177, 509, 773, 1097, 1431, 1547
Hsp92I GRCGYC 1 cut(s) 1969
Hsp92II CATG 7 cut(s) 188, 265, 666, 1189, 1447, 1978, 2005
HspAI GCGC 9 cut(s) 148, 1502, 1536, 1544, 1571, 1620, 1630, 1751, 1969
KasI GGCGCC 1 cut(s) 1968
Ksp22I TGATCA 1 cut(s) 1083
Kzo9I GATC 7 cut(s) 158, 274, 757, 877, 1083, 1756, 1881
LguI GCTCTTC 1 cut(s) 874
LmnI GCTCC 7 cut(s) 117, 355, 399, 1319, 1421, 1732, 1906
LweI GCATC 5 cut(s) 235, 688, 985, 1750, 2005
MaeI CTAG 6 cut(s) 122, 173, 947, 1193, 1416, 2019
MaeIII GTNAC 3 cut(s) 407, 492, 1049
MalI GATC 7 cut(s) 160, 276, 759, 879, 1085, 1758, 1883
MboI GATC 7 cut(s) 158, 274, 757, 877, 1083, 1756, 1881
MboII GAAGA 8 cut(s) 40, 274, 458, 821, 861, 1227, 1266, 1341
MfeI CAATTG 1 cut(s) 1209
MflI RGATCY 1 cut(s) 1881
MhlI GDGCHC 5 cut(s) 228, 396, 1395, 1663, 1863
Mly113I GGCGCC 1 cut(s) 1969
MmeI TCCRAC 3 cut(s) 190, 628, 2014
MseI TTAA 8 cut(s) 302, 404, 720, 768, 891, 1152, 1307, 1892
MslI CAYNNNNRTG 4 cut(s) 186, 389, 1752, 1961
MspA1I CMGCKG 1 cut(s) 1430
MspI CCGG 2 cut(s) 1241, 1340
MspR9I CCNGG 3 cut(s) 1204, 1340, 1341
MunI CAATTG 1 cut(s) 1209
Mva1269I GAATGC 3 cut(s) 1128, 1457, 1694
MvaI CCWGG 1 cut(s) 1204
MvnI CGCG 7 cut(s) 255, 1536, 1544, 1571, 1620, 1751, 1753
MwoI GCNNNNNNNGC 8 cut(s) 248, 1515, 1552, 1598, 1601, 1636, 1667, 1700
NarI GGCGCC 1 cut(s) 1969
NciI CCSGG 2 cut(s) 1340, 1341
NcoI CCATGG 3 cut(s) 184, 662, 1185
NdeI CATATG 2 cut(s) 386, 762
NdeII GATC 7 cut(s) 158, 274, 757, 877, 1083, 1756, 1881
NlaIII CATG 7 cut(s) 188, 265, 666, 1189, 1447, 1978, 2005
NlaIV GGNNCC 4 cut(s) 113, 214, 1883, 1970
NmeAIII GCCGAG 1 cut(s) 1494
NmuCI GTSAC 2 cut(s) 492, 1049
NruI TCGCGA 1 cut(s) 255
NsbI TGCGCA 1 cut(s) 1631
OliI CACNNNNGTG 2 cut(s) 186, 1752
PagI TCATGA 1 cut(s) 261
PaqCI CACCTGC 2 cut(s) 1635, 1672
PciSI GCTCTTC 1 cut(s) 874
PcsI WCGNNNNNNNCGW 2 cut(s) 1741, 1750
PctI GAATGC 3 cut(s) 1128, 1457, 1694
PfeI GAWTC 2 cut(s) 1136, 1344
Pfl23II CGTACG 1 cut(s) 1928
PluTI GGCGCC 1 cut(s) 1972
PshBI ATTAAT 1 cut(s) 1307
Psp6I CCWGG 1 cut(s) 1202
PspGI CCWGG 1 cut(s) 1202
PspLI CGTACG 1 cut(s) 1928
PspN4I GGNNCC 4 cut(s) 113, 214, 1883, 1970
PspPI GGNCC 2 cut(s) 1189, 1845
PsrI GAACNNNNNNTAC 2 cut(s) 9, 41
PstI CTGCAG 3 cut(s) 244, 1603, 1669
PstNI CAGNNNCTG 1 cut(s) 248
PsuI RGATCY 1 cut(s) 1881
PvuII CAGCTG 1 cut(s) 1430
RruI TCGCGA 1 cut(s) 255
RsaI GTAC 4 cut(s) 326, 750, 1930, 2000
RsaNI GTAC 4 cut(s) 325, 749, 1929, 1999
RseI CAYNNNNRTG 4 cut(s) 186, 389, 1752, 1961
SapI GCTCTTC 1 cut(s) 874
SaqAI TTAA 8 cut(s) 302, 404, 720, 768, 891, 1152, 1307, 1892
Sau3AI GATC 7 cut(s) 158, 274, 757, 877, 1083, 1756, 1881
Sau96I GGNCC 2 cut(s) 1189, 1845
ScaI AGTACT 1 cut(s) 750
ScrFI CCNGG 3 cut(s) 1204, 1340, 1341
SduI GDGCHC 5 cut(s) 228, 396, 1395, 1663, 1863
SfaNI GCATC 5 cut(s) 235, 688, 985, 1750, 2005
SfcI CTRYAG 4 cut(s) 240, 1425, 1599, 1665
SfoI GGCGCC 1 cut(s) 1970
SinI GGWCC 1 cut(s) 1189
SmaI CCCGGG 1 cut(s) 1341
SmiMI CAYNNNNRTG 4 cut(s) 186, 389, 1752, 1961
SmlI CTYRAG 1 cut(s) 752
SmoI CTYRAG 1 cut(s) 752
SsiI CCGC 7 cut(s) 917, 1542, 1569, 1618, 1645, 1692, 1950
SspDI GGCGCC 1 cut(s) 1968
SspMI CTAG 6 cut(s) 122, 173, 947, 1193, 1416, 2019
StyD4I CCNGG 3 cut(s) 1202, 1338, 1339
StyI CCWWGG 4 cut(s) 107, 184, 662, 1185
TaaI ACNGT 5 cut(s) 359, 480, 748, 943, 1119
TaqI TCGA 4 cut(s) 880, 1132, 1744, 1793
TatI WGTACW 2 cut(s) 748, 1998
TfiI GAWTC 2 cut(s) 1136, 1344
Tru1I TTAA 8 cut(s) 302, 404, 720, 768, 891, 1152, 1307, 1892
Tru9I TTAA 8 cut(s) 302, 404, 720, 768, 891, 1152, 1307, 1892
TscAI CASTG 3 cut(s) 501, 868, 1685
TseFI GTSAC 2 cut(s) 492, 1049
Tsp45I GTSAC 2 cut(s) 492, 1049
TspDTI ATGAA 8 cut(s) 194, 225, 278, 608, 1004, 1251, 1283, 1454
TspGWI ACGGA 1 cut(s) 1865
TspMI CCCGGG 1 cut(s) 1339
TspRI CASTG 3 cut(s) 501, 868, 1685
VneI GTGCAC 2 cut(s) 1391, 1659
VpaK11BI GGWCC 1 cut(s) 1189
VspI ATTAAT 1 cut(s) 1307
XapI RAATTY 3 cut(s) 617, 725, 1270
XbaI TCTAGA 1 cut(s) 946
XcmI CCANNNNNNNNNTGG 1 cut(s) 669
XmaI CCCGGG 1 cut(s) 1339
XmiI GTMKAC 1 cut(s) 1281
XspI CTAG 6 cut(s) 122, 173, 947, 1193, 1416, 2019
ZrmI AGTACT 1 cut(s) 750
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.