Rh3DG239300

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
Physical Location & Seq
Reverse (-)
23018469 .. 23020044
1576 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG239300.1

Sequence Viewer

Length: 1362 bp
ATGGTCCTCTATTTGGGAACTGCCCCACTGGTTCTTGTCTCGTCGGCTGAGGCTGCCCGCGAGATTATGAAAACCAATGATCTCGAATTCTCCAATAGACCCAAGTCTGTCATCTTCCAGAAGCTTCTCTGCAATTACAAAGACGTCGCCATGGCACCTTACGGTGAGTACTGGAAGCAGGTGAAGAGTATATGTGTTGTTAATCTCTTGAGCAACAAAAGGGTTCGCTTTTTTCGTGCTGTGAGAGAAGAGGAAACAAAACTCATGATCAACAAGATTAATGAATCATCGGGAGAAGTCATGAACTTAAGAGAAATGTTTGTGATGCTTACCAGTGATATTATTTGTAGAGTGACAATGGGGAGGAAGTACAGTGCTAGTGCTGTAGGGGAAGGTGGTAATACAATTTTGTTTGAGGAGCTATTGTGGGAGTTCACAGAGTTATTGAGGAGTTTCTATATTGGAGACTATATTCCATGGCTTGCTTGGTTGAGCCGTGTTAATGGTTTGGAAGCTAAATTAGACAAGGTGGCTAAGCAGTTCGATGACTTCTTGGATAGAGTGATTCAAGATCGTGTAGATCATCGTTCAAAGGCCAGTGGAAGTAGTGTCCATGTGAATCATGCTGATCCAAATGGGGAGGACGAAAAGGATTTTGTGGATGTTTTGCTCGAGATTCAAGAAGGAAACTTGTCTGGTTTACCTATTGATAGAGTTAGTATAAAGGCTGTCATATTGGATATGCTTGGTGGAGGCGCTTATAGCACATATTCTGTCATAGAGTGGACGATGGCAGAGCTTTTAAGGCATCCAAGGGTAATGAAAAAATTGCAAAGTGAGGTCCGGGAGTCGGCGGGAGACAAAACACACATAACAGAGGATGATTTGCTTGAAATGAACTACTTGAATGCCGTGATCAAGGAGACCCTTCGCTTACACCCTCCATTTACTGTACTATCTCGGATGTCCGGCCAAGATGTGGAAGTAAAGGGTTACAAAATTAAAGCCAACACACGCATTGTAGTGAATATGTGGCAAATTGGAAGAGATCCCAAGTCATACAACAAACCAGAGGAGTACGAGCCAGAAAGGTTCTTGAATGAGAATAGTGGAGTAAGTTATAAAGGAAACGACTTCCGGTTGATTCCATTTGGAGCTGGCAGGAGGGTCTGTCCCGGAATTCAGTTTACCATGGCTGTTAATAAGACTGCTTTAGCGAATTTGGTGCACAAGTTTGATTGGGCATTGCCTGGCGGAGCAAGCGGGGATGATTTAGACATGACTGAATCCACTGGCATGCCAACACATCGAAAGCATCCTTTGAAAGCCGTGGCTATTCCATACCTAGCTAACTACGGATAG

Protein Analysis

453

Amino Acids

51.28

Weight (kDa)

6.36

Isoelectric Point (pI)

33.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 3 - 434 1.2e-84 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000061)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G48270 AT3G48280 AT3G48290 AT3G48290 AT3G48300 AT3G48300 AT3G48310 AT3G48320 AT4G20235 AT4G20235
fragaria_vesca FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g36190 FvH4_3g14160 FvH4_3g14210 FvH4_3g14260 FvH4_3g14260 FvH4_3g21100 FvH4_3g21380 FvH4_4g24460 FvH4_4g24500 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06572 FvH4_5g06573 FvH4_5g06574 FvH4_5g06575 FvH4_5g06576 FvH4_5g06577 FvH4_5g06577 FvH4_5g07540 FvH4_5g07550 FvH4_5g07560 FvH4_5g07570 FvH4_5g29491 FvH4_5g29492 FvH4_6g23870 FvH4_6g23880 FvH4_6g26870 FvH4_7g11861 FvH4_7g11862 FvH4_7g13050 FvH4_7g13060 FvH4_7g13080 FvH4_7g13080 FvH4_7g22630 FvH4_7g22650 FvH4_7g22651 FvH4_7g23020
malus_domestica MD03G1207400.v1.1 MD03G1214800.v1.1 MD03G1218500.v1.1 MD06G1163100.v1.1 MD06G1163300.v1.1 MD06G1163400.v1.1 MD06G1163500.v1.1 MD06G1163600.v1.1 MD06G1163800.v1.1 MD06G1164000.v1.1 MD06G1164100.v1.1 MD06G1224400.v1.1 MD08G1222800.v1.1 MD08G1222900.v1.1 MD08G1223100.v1.1 MD11G1091500.v1.1 MD11G1091800.v1.1 MD14G1163200.v1.1 MD14G1169000.v1.1 MD15G1207200.v1.1 MD15G1207300.v1.1 MD17G1259400.v1.1
prunus_persica Prupe.4G198100_v2.0.a1 Prupe.4G199100_v2.0.a1 Prupe.4G199400_v2.0.a1 Prupe.4G199800_v2.0.a1 Prupe.4G225200_v2.0.a1 Prupe.4G239100_v2.0.a1 Prupe.5G156600_v2.0.a1 Prupe.5G163500_v2.0.a1 Prupe.7G209500_v2.0.a1 Prupe.I003400_v2.0.a1
pyrus_communis pycom03g16340 pycom06g14600 pycom06g14610 pycom06g14620 pycom06g14630 pycom06g14640 pycom06g14670 pycom06g14690 pycom08g19390 pycom08g19400 pycom08g19410 pycom11g07600 pycom11g07610 pycom11g07620 pycom11g07660 pycom14g13580 pycom14g14080 pycom14g14100 pycom14g14110 pycom15g18380 pycom17g26080
rosa_chinensis RchiOBHm_Chr1g0339441 RchiOBHm_Chr1g0339451 RchiOBHm_Chr1g0352191 RchiOBHm_Chr1g0368221 RchiOBHm_Chr2g0129531 RchiOBHm_Chr2g0129541 RchiOBHm_Chr3g0477631 RchiOBHm_Chr3g0482551 RchiOBHm_Chr3g0482561 RchiOBHm_Chr3g0482571 RchiOBHm_Chr4g0411601 RchiOBHm_Chr4g0422181 RchiOBHm_Chr5g0036661 RchiOBHm_Chr5g0036731 RchiOBHm_Chr6g0274021 RchiOBHm_Chr7g0190921 RchiOBHm_Chr7g0190931 RchiOBHm_Chr7g0190941 RchiOBHm_Chr7g0190951 RchiOBHm_Chr7g0190961 RchiOBHm_Chr7g0190971 RchiOBHm_Chr7g0191001 RchiOBHm_Chr7g0191011 RchiOBHm_Chr7g0191021 RchiOBHm_Chr7g0192181 RchiOBHm_Chr7g0192191 RchiOBHm_Chr7g0192201 RchiOBHm_Chr7g0192221 RchiOBHm_Chr7g0192231 RchiOBHm_Chr7g0192281 RchiOBHm_Chr7g0197311
rosa_laevigata RLG00000003942 RLG00000004345 RLG00000004379 RLG00000004383 RLG00000004384 RLG00000004385 RLG00000004387 RLG00000004388 RLG00000004389 RLG00000004480 RLG00000004481 RLG00000004482 RLG00000004483 RLG00000004485 RLG00000008342 RLG00000008401 RLG00000013583 RLG00000017044 RLG00000027229 RLG00000028349 RLG00000028350 RLG00000028353 RLG00000028820 RLG00000033707 RLG00000033710
rosa_multiflora Rmu_co8020340.1_g000001 Rmu_co8096640.1_g000001 Rmu_co8214930.1_g000001 Rmu_co8223272.1_g000001 Rmu_co8282535.1_g000001 Rmu_co8343567.1_g000001 Rmu_co8404191.1_g000001 Rmu_co8455157.1_g000001 Rmu_sc0000062.1_g000028 Rmu_sc0000082.1_g000091 Rmu_sc0000509.1_g000017 Rmu_sc0000775.1_g000001 Rmu_sc0000999.1_g000034 Rmu_sc0001559.1_g000004 Rmu_sc0001559.1_g000009 Rmu_sc0002164.1_g000001 Rmu_sc0002164.1_g000005 Rmu_sc0002164.1_g000007 Rmu_sc0002164.1_g000008 Rmu_sc0002164.1_g000009 Rmu_sc0002164.1_g000019 Rmu_sc0002247.1_g000009 Rmu_sc0002373.1_g000002 Rmu_sc0002373.1_g000003 Rmu_sc0002944.1_g000059 Rmu_sc0003930.1_g000004 Rmu_sc0004958.1_g000001 Rmu_sc0005197.1_g000014 Rmu_sc0005898.1_g000008 Rmu_sc0005898.1_g000009 Rmu_sc0005898.1_g000015 Rmu_sc0006059.1_g000004 Rmu_sc0006059.1_g000010 Rmu_sc0006903.1_g000007 Rmu_sc0006903.1_g000008 Rmu_sc0006968.1_g000001 Rmu_sc0011009.1_g000009 Rmu_sc0022852.1_g000002 Rmu_sc0033854.1_g000001 Rmu_ssc0000421.1_g000057 Rmu_ssc0000421.1_g000067 Rmu_ssc0000421.1_g000069 Rmu_ssc0000421.1_g000072 Rmu_ssc0000421.1_g000081 Rmu_ssc0000421.1_g000086
rosa_roxburghii Rroxscaffold_158G00443680 Rroxscaffold_158G00443710 Rroxscaffold_158G00443720 Rroxscaffold_158G00443740 Rroxscaffold_1G00034950 Rroxscaffold_1G00044240 Rroxscaffold_1G00044270 Rroxscaffold_3G00241380 Rroxscaffold_3G00247000 Rroxscaffold_3G00263120 Rroxscaffold_3G00263150 Rroxscaffold_3G00263160 Rroxscaffold_3G00263170 Rroxscaffold_3G00263180 Rroxscaffold_3G00263190 Rroxscaffold_3G00263210 Rroxscaffold_3G00263230 Rroxscaffold_3G00263260 Rroxscaffold_3G00264110 Rroxscaffold_3G00264130 Rroxscaffold_3G00264160 Rroxscaffold_3G00264180 Rroxscaffold_3G00264200 Rroxscaffold_4G00288750 Rroxscaffold_4G00303110 Rroxscaffold_4G00303120 Rroxscaffold_4G00322280 Rroxscaffold_5G00356200 Rroxscaffold_6G00399150 Rroxscaffold_6G00399290 Rroxscaffold_7G00194770
rosa_rugosa Rorug01G0225300 Rorug01G0225400 Rorug01G0225800 Rorug01G0226000 Rorug01G0339400 Rorug01G0451500 Rorug03G0196900 Rorug03G0294900 Rorug04G0107500 Rorug04G0107600 Rorug04G0129700 Rorug04G0178000 Rorug05G0144900.1 Rorug05G0145000 Rorug05G0228000 Rorug05G0228600 Rorug06G0078300 Rorug06G0508000 Rorug06G0508100 Rorug06G0508100 Rorug06G0508400 Rorug06G0513400 Rorug07G0000100 Rorug07G0000200 Rorug07G0000300 Rorug07G0000500 Rorug07G0000800
rosa_samantha Rh1BG060400 Rh1BG210300 Rh1BG210700 Rh1BG210800 Rh1BG309800 Rh1CG223800 Rh1CG224200 Rh1CG325200 Rh1DG237000 Rh1DG237400 Rh1DG341600 Rh2DG365700 Rh3AG212500 Rh3AG248400 Rh3CG239800 Rh3DG239300 Rh4AG169300 Rh4BG166200 Rh4BG240500 Rh4BG240600 Rh4DG163600 Rh5AG249600 Rh5AG249900 Rh5AG250000 Rh5CG283100 Rh5CG283200 Rh5CG283400 Rh5DG259200 Rh5DG259800 Rh6BG197700 Rh6CG197800 Rh6DG189400 Rh7AG114900 Rh7AG115000 Rh7AG115200 Rh7AG115300 Rh7AG115400 Rh7AG115500 Rh7AG123900 Rh7AG124100 Rh7AG124300 Rh7BG117200 Rh7BG117400 Rh7BG118400 Rh7BG125400 Rh7BG125600 Rh7BG125700 Rh7BG125800 Rh7BG125900 Rh7BG126000 Rh7BG126400 Rh7BG126600 Rh7BG126700 Rh7BG166200 Rh7DG118600 Rh7DG118700 Rh7DG118900 Rh7DG119000 Rh7DG119100 Rh7DG127400 Rh7DG127600 Rh7DG127700 Rh7DG127900 Rh7DG128200
rosa_wichuraiana Rw1G013270 Rw1G020790 Rw2G027890 Rw2G028040 Rw3G019240 Rw4G014070 Rw4G020540 Rw5G021320 Rw5G022970 Rw6G016920 Rw7G010020 Rw7G010040 Rw7G010580 Rw7G010590 Rw7G010600 Rw7G010610 Rw7G010620 Rw7G010630 Rw7G010640 Rw7G010690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1122
AarI CACCTGC 1 cut(s) 169
AatII GACGTC 1 cut(s) 147
Acc36I ACCTGC 1 cut(s) 169
AccB1I GGYRCC 1 cut(s) 154
AccB7I CCANNNNNTGG 1 cut(s) 979
AccII CGCG 1 cut(s) 60
AciI CCGC 4 cut(s) 58, 854, 1254, 1263
AclWI GGATC 2 cut(s) 623, 1043
AcoI YGGCCR 1 cut(s) 970
AcsI RAATTY 3 cut(s) 86, 1179, 1219
AcyI GRCGYC 1 cut(s) 144
AfaI GTAC 4 cut(s) 170, 371, 954, 1079
AfiI CCNNNNNNNGG 3 cut(s) 13, 850, 979
AflII CTTAAG 1 cut(s) 307
AgsI TTSAA 7 cut(s) 569, 591, 680, 893, 907, 1099, 1324
AjnI CCWGG 1 cut(s) 1249
AluBI AGCT 6 cut(s) 124, 421, 515, 799, 1157, 1349
AluI AGCT 6 cut(s) 124, 421, 515, 799, 1157, 1349
Alw21I GWGCWC 1 cut(s) 1230
Alw26I GTCTC 4 cut(s) 43, 459, 852, 917
Alw44I GTGCAC 1 cut(s) 1226
AlwI GGATC 2 cut(s) 623, 1043
Ama87I CYCGRG 1 cut(s) 671
AoxI GGCC 2 cut(s) 594, 970
ApaLI GTGCAC 1 cut(s) 1226
ApeKI GCWGC 1 cut(s) 53
ApoI RAATTY 3 cut(s) 86, 1179, 1219
AseI ATTAAT 1 cut(s) 279
AspLEI GCGC 1 cut(s) 758
AspS9I GGNCC 2 cut(s) 4, 841
AsuC2I CCSGG 2 cut(s) 845, 1176
AsuHPI GGTGA 2 cut(s) 176, 193
AvaI CYCGRG 1 cut(s) 671
AvaII GGWCC 2 cut(s) 4, 841
BaeGI GKGCMC 1 cut(s) 1230
BanI GGYRCC 1 cut(s) 154
Bbv12I GWGCWC 1 cut(s) 1230
BbvCI CCTCAGC 1 cut(s) 48
BbvI GCAGC 1 cut(s) 40
BccI CCATC 1 cut(s) 784
BceAI ACGGC 3 cut(s) 480, 896, 1313
BcgI CGANNNNNNTGC 2 cut(s) 1207, 1241
BciT130I CCWGG 1 cut(s) 1251
BclI TGATCA 2 cut(s) 267, 915
BcnI CCSGG 2 cut(s) 845, 1176
BcoDI GTCTC 4 cut(s) 43, 459, 852, 917
BfaI CTAG 2 cut(s) 378, 1346
BfmI CTRYAG 1 cut(s) 384
BfoI RGCGCY 1 cut(s) 759
BfrI CTTAAG 1 cut(s) 307
BfuAI ACCTGC 1 cut(s) 169
BisI GCNGC 1 cut(s) 54
BlpI GCTNAGC 1 cut(s) 534
BlsI GCNGC 1 cut(s) 55
BmcAI AGTACT 1 cut(s) 170
Bme1390I CCNGG 3 cut(s) 845, 1176, 1251
Bme18I GGWCC 2 cut(s) 4, 841
BmeT110I CYCGRG 1 cut(s) 671
BmgT120I GGNCC 2 cut(s) 4, 841
BmiI GGNNCC 1 cut(s) 156
BmrFI CCNGG 3 cut(s) 845, 1176, 1251
BmsI GCATC 3 cut(s) 315, 817, 1324
BoxI GACNNNNGTC 1 cut(s) 103
Bpu10I CCTNAGC 1 cut(s) 48
Bpu1102I GCTNAGC 1 cut(s) 534
BpuEI CTTGAG 1 cut(s) 229
BpuMI CCSGG 2 cut(s) 845, 1176
BsaHI GRCGYC 1 cut(s) 144
BsaI GGTCTC 1 cut(s) 917
BsaJI CCNNGG 5 cut(s) 150, 476, 812, 1191, 1329
BsaWI WCCGGW 1 cut(s) 1137
BsaXI ACNNNNNCTCC 4 cut(s) 410, 440, 1156, 1186
Bsc4I CCNNNNNNNGG 3 cut(s) 13, 850, 979
Bse1I ACTGG 5 cut(s) 33, 176, 333, 597, 1297
Bse3DI GCAATG 1 cut(s) 1244
BseBI CCWGG 1 cut(s) 1251
BseDI CCNNGG 5 cut(s) 150, 476, 812, 1191, 1329
BseGI GGATG 6 cut(s) 667, 808, 886, 969, 1273, 1315
BseLI CCNNNNNNNGG 3 cut(s) 13, 850, 979
BseMI GCAATG 1 cut(s) 1244
BseMII CTCAG 1 cut(s) 39
BseNI ACTGG 5 cut(s) 33, 176, 333, 597, 1297
BseRI GAGGAG 3 cut(s) 431, 463, 1088
BseSI GKGCMC 1 cut(s) 1230
BseXI GCAGC 1 cut(s) 40
Bsh1236I CGCG 1 cut(s) 60
BshFI GGCC 2 cut(s) 596, 972
BshNI GGYRCC 1 cut(s) 154
BsiHKAI GWGCWC 1 cut(s) 1230
BsiHKCI CYCGRG 1 cut(s) 671
BsiSI CCGG 4 cut(s) 844, 969, 1138, 1176
BslFI GGGAC 1 cut(s) 1158
BslI CCNNNNNNNGG 3 cut(s) 13, 850, 979
BsmAI GTCTC 4 cut(s) 43, 459, 852, 917
BsmFI GGGAC 1 cut(s) 1158
BsmI GAATGC 1 cut(s) 913
BsnI GGCC 2 cut(s) 596, 972
Bso31I GGTCTC 1 cut(s) 917
BsoBI CYCGRG 1 cut(s) 671
Bsp1286I GDGCHC 1 cut(s) 1230
Bsp143I GATC 7 cut(s) 79, 267, 571, 580, 628, 915, 1048
Bsp1720I GCTNAGC 1 cut(s) 534
Bsp19I CCATGG 3 cut(s) 150, 476, 1191
BspACI CCGC 4 cut(s) 58, 854, 1254, 1263
BspANI GGCC 2 cut(s) 596, 972
BspCNI CTCAG 1 cut(s) 40
BspFNI CGCG 1 cut(s) 60
BspHI TCATGA 2 cut(s) 264, 300
BspLI GGNNCC 1 cut(s) 156
BspMI ACCTGC 1 cut(s) 169
BspPI GGATC 2 cut(s) 623, 1043
BspT107I GGYRCC 1 cut(s) 154
BspTI CTTAAG 1 cut(s) 307
BspTNI GGTCTC 1 cut(s) 917
BsrDI GCAATG 1 cut(s) 1244
BsrI ACTGG 5 cut(s) 33, 176, 333, 597, 1297
BssECI CCNNGG 5 cut(s) 150, 476, 812, 1191, 1329
BssMI GATC 7 cut(s) 79, 267, 571, 580, 628, 915, 1048
BssNI GRCGYC 1 cut(s) 144
BssT1I CCWWGG 4 cut(s) 150, 476, 812, 1191
Bst2UI CCWGG 1 cut(s) 1251
Bst4CI ACNGT 3 cut(s) 164, 374, 952
Bst6I CTCTTC 3 cut(s) 179, 243, 1039
BstACI GRCGYC 1 cut(s) 144
BstAFI CTTAAG 1 cut(s) 307
BstC8I GCNNGC 5 cut(s) 58, 483, 1159, 1261, 1298
BstDEI CTNAG 2 cut(s) 48, 534
BstDSI CCRYGG 4 cut(s) 150, 476, 1191, 1329
BstF5I GGATG 6 cut(s) 667, 808, 886, 969, 1273, 1315
BstFNI CGCG 1 cut(s) 60
BstH2I RGCGCY 1 cut(s) 759
BstHHI GCGC 1 cut(s) 758
BstKTI GATC 7 cut(s) 82, 270, 574, 583, 631, 918, 1051
BstMAI GTCTC 4 cut(s) 43, 459, 852, 917
BstMBI GATC 7 cut(s) 79, 267, 571, 580, 628, 915, 1048
BstMWI GCNNNNNNNGC 4 cut(s) 53, 762, 805, 1260
BstNI CCWGG 1 cut(s) 1251
BstNSI RCATGY 1 cut(s) 1300
BstPAI GACNNNNGTC 1 cut(s) 103
BstSCI CCNGG 3 cut(s) 843, 1174, 1249
BstSFI CTRYAG 1 cut(s) 384
BstSLI GKGCMC 1 cut(s) 1230
BstUI CGCG 1 cut(s) 60
BstV1I GCAGC 1 cut(s) 40
BstX2I RGATCY 1 cut(s) 1048
BstYI RGATCY 1 cut(s) 1048
BsuRI GGCC 2 cut(s) 596, 972
BtgI CCRYGG 4 cut(s) 150, 476, 1191, 1329
BtsCI GGATG 6 cut(s) 667, 808, 886, 969, 1273, 1315
BtsIMutI CAGTG 5 cut(s) 26, 340, 379, 604, 1290
BveI ACCTGC 1 cut(s) 169
Cac8I GCNNGC 5 cut(s) 58, 483, 1159, 1261, 1298
CciI TCATGA 2 cut(s) 264, 300
CfoI GCGC 1 cut(s) 758
Cfr13I GGNCC 2 cut(s) 4, 841
Csp6I GTAC 4 cut(s) 169, 370, 953, 1078
CviAII CATG 9 cut(s) 151, 265, 301, 477, 614, 623, 1192, 1279, 1297
CviQI GTAC 4 cut(s) 169, 370, 953, 1078
DdeI CTNAG 2 cut(s) 48, 534
DpnI GATC 7 cut(s) 81, 269, 573, 582, 630, 917, 1050
DpnII GATC 7 cut(s) 79, 267, 571, 580, 628, 915, 1048
EaeI YGGCCR 1 cut(s) 970
Eam1104I CTCTTC 3 cut(s) 179, 243, 1039
EarI CTCTTC 3 cut(s) 179, 243, 1039
EciI GGCGGA 1 cut(s) 1269
Eco130I CCWWGG 4 cut(s) 150, 476, 812, 1191
Eco31I GGTCTC 1 cut(s) 917
Eco47I GGWCC 2 cut(s) 4, 841
Eco88I CYCGRG 1 cut(s) 671
EcoRI GAATTC 2 cut(s) 86, 1179
EcoRII CCWGG 1 cut(s) 1249
EcoT14I CCWWGG 4 cut(s) 150, 476, 812, 1191
ErhI CCWWGG 4 cut(s) 150, 476, 812, 1191
FaeI CATG 9 cut(s) 154, 268, 304, 480, 617, 626, 1195, 1282, 1300
FaqI GGGAC 1 cut(s) 1158
FatI CATG 9 cut(s) 150, 264, 300, 476, 613, 622, 1191, 1278, 1296
FauI CCCGC 3 cut(s) 65, 847, 1256
FbaI TGATCA 2 cut(s) 267, 915
Fnu4HI GCNGC 1 cut(s) 54
FokI GGATG 6 cut(s) 674, 795, 893, 976, 1280, 1302
Fsp4HI GCNGC 1 cut(s) 54
FspBI CTAG 2 cut(s) 378, 1346
GlaI GCGC 1 cut(s) 757
GluI GCNGC 1 cut(s) 54
HaeII RGCGCY 1 cut(s) 759
HaeIII GGCC 2 cut(s) 596, 972
HapII CCGG 4 cut(s) 844, 969, 1138, 1176
HhaI GCGC 1 cut(s) 758
Hin1I GRCGYC 1 cut(s) 144
Hin1II CATG 9 cut(s) 154, 268, 304, 480, 617, 626, 1195, 1282, 1300
Hin6I GCGC 1 cut(s) 756
HinP1I GCGC 1 cut(s) 756
HindIII AAGCTT 1 cut(s) 122
HinfI GANTC 7 cut(s) 284, 565, 619, 676, 848, 1144, 1286
HpaII CCGG 4 cut(s) 844, 969, 1138, 1176
HphI GGTGA 2 cut(s) 176, 193
Hpy166II GTNNAC 5 cut(s) 435, 701, 786, 1188, 1228
Hpy188I TCNGA 1 cut(s) 963
Hpy8I GTNNAC 5 cut(s) 435, 701, 786, 1188, 1228
Hpy99I CGWCG 2 cut(s) 46, 149
HpyAV CCTTC 3 cut(s) 386, 677, 938
HpyCH4III ACNGT 3 cut(s) 164, 374, 952
HpyCH4IV ACGT 1 cut(s) 144
HpyCH4V TGCA 3 cut(s) 132, 832, 1228
HpyF10VI GCNNNNNNNGC 4 cut(s) 53, 762, 805, 1260
HpyF3I CTNAG 2 cut(s) 48, 534
HpySE526I ACGT 1 cut(s) 144
Hsp92I GRCGYC 1 cut(s) 144
Hsp92II CATG 9 cut(s) 154, 268, 304, 480, 617, 626, 1195, 1282, 1300
HspAI GCGC 1 cut(s) 756
Ksp22I TGATCA 2 cut(s) 267, 915
Kzo9I GATC 7 cut(s) 79, 267, 571, 580, 628, 915, 1048
LmnI GCTCC 3 cut(s) 418, 1154, 1256
Lsp1109I GCAGC 1 cut(s) 40
LweI GCATC 3 cut(s) 315, 817, 1324
MaeI CTAG 2 cut(s) 378, 1346
MaeII ACGT 1 cut(s) 144
MaeIII GTNAC 2 cut(s) 352, 992
MalI GATC 7 cut(s) 81, 269, 573, 582, 630, 917, 1050
MboI GATC 7 cut(s) 79, 267, 571, 580, 628, 915, 1048
MboII GAAGA 4 cut(s) 106, 196, 260, 1056
MflI RGATCY 1 cut(s) 1048
MhlI GDGCHC 1 cut(s) 1230
MluCI AATT 9 cut(s) 86, 133, 405, 518, 827, 999, 1038, 1179, 1219
MlyI GAGTC 1 cut(s) 857
MseI TTAA 7 cut(s) 201, 279, 308, 501, 803, 1002, 1200
MslI CAYNNNNRTG 2 cut(s) 1022, 1295
MspCI CTTAAG 1 cut(s) 307
MspI CCGG 4 cut(s) 844, 969, 1138, 1176
MspR9I CCNGG 3 cut(s) 845, 1176, 1251
Mva1269I GAATGC 1 cut(s) 913
MvaI CCWGG 1 cut(s) 1251
MvnI CGCG 1 cut(s) 60
MwoI GCNNNNNNNGC 4 cut(s) 53, 762, 805, 1260
NciI CCSGG 2 cut(s) 845, 1176
NcoI CCATGG 3 cut(s) 150, 476, 1191
NdeII GATC 7 cut(s) 79, 267, 571, 580, 628, 915, 1048
NlaIII CATG 9 cut(s) 154, 268, 304, 480, 617, 626, 1195, 1282, 1300
NlaIV GGNNCC 1 cut(s) 156
NmuCI GTSAC 1 cut(s) 352
NspI RCATGY 1 cut(s) 1300
PaeI GCATGC 1 cut(s) 1300
PaeR7I CTCGAG 1 cut(s) 671
PagI TCATGA 2 cut(s) 264, 300
PaqCI CACCTGC 1 cut(s) 169
PcsI WCGNNNNNNNCGW 1 cut(s) 232
PctI GAATGC 1 cut(s) 913
PfeI GAWTC 6 cut(s) 284, 565, 619, 676, 1144, 1286
PflMI CCANNNNNTGG 1 cut(s) 979
PfoI TCCNGGA 2 cut(s) 843, 1174
PkrI GCNGC 1 cut(s) 55
PleI GAGTC 1 cut(s) 856
PpsI GAGTC 1 cut(s) 856
PshAI GACNNNNGTC 1 cut(s) 103
PshBI ATTAAT 1 cut(s) 279
PsiI TTATAA 1 cut(s) 1122
Psp6I CCWGG 1 cut(s) 1249
PspGI CCWGG 1 cut(s) 1249
PspN4I GGNNCC 1 cut(s) 156
PspPI GGNCC 2 cut(s) 4, 841
PsuI RGATCY 1 cut(s) 1048
RsaI GTAC 4 cut(s) 170, 371, 954, 1079
RsaNI GTAC 4 cut(s) 169, 370, 953, 1078
RseI CAYNNNNRTG 2 cut(s) 1022, 1295
SaqAI TTAA 7 cut(s) 201, 279, 308, 501, 803, 1002, 1200
SatI GCNGC 1 cut(s) 54
Sau3AI GATC 7 cut(s) 79, 267, 571, 580, 628, 915, 1048
Sau96I GGNCC 2 cut(s) 4, 841
ScaI AGTACT 1 cut(s) 170
SchI GAGTC 1 cut(s) 857
ScrFI CCNGG 3 cut(s) 845, 1176, 1251
SduI GDGCHC 1 cut(s) 1230
SfaNI GCATC 3 cut(s) 315, 817, 1324
SfcI CTRYAG 1 cut(s) 384
Sfr274I CTCGAG 1 cut(s) 671
SinI GGWCC 2 cut(s) 4, 841
SlaI CTCGAG 1 cut(s) 671
SmiMI CAYNNNNRTG 2 cut(s) 1022, 1295
SmlI CTYRAG 3 cut(s) 208, 307, 671
SmoI CTYRAG 3 cut(s) 208, 307, 671
SphI GCATGC 1 cut(s) 1300
Sse9I AATT 9 cut(s) 86, 133, 405, 518, 827, 999, 1038, 1179, 1219
SsiI CCGC 4 cut(s) 58, 854, 1254, 1263
SspMI CTAG 2 cut(s) 378, 1346
StyD4I CCNGG 3 cut(s) 843, 1174, 1249
StyI CCWWGG 4 cut(s) 150, 476, 812, 1191
TaaI ACNGT 3 cut(s) 164, 374, 952
TaiI ACGT 1 cut(s) 147
TaqI TCGA 4 cut(s) 84, 543, 672, 1309
TasI AATT 9 cut(s) 86, 133, 405, 518, 827, 999, 1038, 1179, 1219
TatI WGTACW 3 cut(s) 168, 369, 952
TfiI GAWTC 6 cut(s) 284, 565, 619, 676, 1144, 1286
Tru1I TTAA 7 cut(s) 201, 279, 308, 501, 803, 1002, 1200
Tru9I TTAA 7 cut(s) 201, 279, 308, 501, 803, 1002, 1200
TscAI CASTG 5 cut(s) 33, 340, 379, 604, 1297
TseFI GTSAC 1 cut(s) 352
TseI GCWGC 1 cut(s) 53
Tsp45I GTSAC 1 cut(s) 352
TspDTI ATGAA 5 cut(s) 83, 297, 317, 836, 911
TspRI CASTG 5 cut(s) 33, 340, 379, 604, 1297
Van91I CCANNNNNTGG 1 cut(s) 979
Vha464I CTTAAG 1 cut(s) 307
VneI GTGCAC 1 cut(s) 1226
VpaK11BI GGWCC 2 cut(s) 4, 841
VspI ATTAAT 1 cut(s) 279
XapI RAATTY 3 cut(s) 86, 1179, 1219
XceI RCATGY 1 cut(s) 1300
XcmI CCANNNNNNNNNTGG 1 cut(s) 483
XhoI CTCGAG 1 cut(s) 671
XspI CTAG 2 cut(s) 378, 1346
ZraI GACGTC 1 cut(s) 145
ZrmI AGTACT 1 cut(s) 170
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.