MD06G1163100.v1.1

Cytochrome p450

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
Physical Location & Seq
Reverse (-)
30385276 .. 30388164
2889 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1163100.v1.1.491

Sequence Viewer

Length: 1599 bp
ATGCTAAGACATCTCTTACAAATGCTACAACTGCTTGGAACCTCCGACTTGTTGCAACCGGTTTCCTTCGCGCTTGTGGCCATTTTCCTAATCCTCCTATACAAATGGTCCTCTGCCAGTGCAACCACCGCCAACAACTCCTTACCGCCATCTCCACCAAAGTTCCCCATCATTGGAAACTTTCACCAATTAGGCTTGCACCCACATCGCTCACTTCTAGCTTTATCTAAACGCCATGGCCCTCTTATGCTTCTCCACTTCGGAAGTGTCCCAGTCCTTGTTGTCTCTTCTGCCGAGGCTGCCCGTGAGATCATGAAAACCCATGAAATCGCATTTTCCGACCGACCCAAGTCCACCATCTATGAGAAGCTTGCCTACAACTACAAAGACATCGCAACAGCCCCTTATGGTGAGTACTGGAGGCAGATGAAAAGTATATGTGTTTTAAATCTTTTGAGCAACAAAAGGGTTCGCTCTTTTCGTGCTGTGAGAGAAGAGGAAACCCAGCTCATGATCAACAAAATAAAGGACTCTTGTTCTATATTATCCTCTTCCTCCTCATCATCATCAGTTCTGAATTTACGCGAAATGTTTGTGACGCTTACCAACGATGTGCTATGTAGAGTGGCTCTAGGGAGGAAGTACAGTGGTGAAGAAGGTGGGAAGATGTCTAAGGAGATTATAAAGGAGTTCGTGGAGTTATTGGGAACTATGGATATCGGGGACTATATCCCATGGCTTTCTTGGTTGAGCCGTGTCAATGGTTTGCATGCCAAGATAGACAAGGTTGCTAAGCAATTTGACGACTTTCTAGAGAGTGTGGTTCAAGAGCATAGCGATCAGACGTCCAAAAGTGGAAATGATGAACATGTTCATGTTGAGAACGAGGAACAAAAGGATTTCGTGGATATTTTGCTTGGGATTCAGGAAGGAAGCTTGGCTGGTTTTTCTCTTGATAGAGTTGGCATAAAGGCTCTCATCTTAGATATGTTTATTGCAGGCACTCATACCACATATGCAGTGCTAGAGTGGGCAATGACTGAGCTTTTGAGGCATCCGAGGATCATGAGCAAATTGCAGAATGAGGTACGGGGAATAGTCGGAAACATAACAGACATAATTACAGAGGATGATTTGGTAGGCATGCACTACTTGAAGGCAGTGATCAAGGAGACTCTTCGCTTACATACTCCAGGTCCATTACTACTTCCCAGGGTGTCGACACAAGATGTGAAAATAAATGATTACGACATTAAGGCCAAGACACTTGTTATGATCAACGCGTGGGGAATCGGAAGAGATCCTGAAACGTATGAAAACCCAGAGGAGTACGAGCCAGAAAGGTTCTTGAATAACGGTCTAGACTATAAAGGGAATGACTTCCAGTTCATTCCATTTGGAGCTGGCAGGAGGATCTGCCCGGGAATTCAGTTTGCAATATCTATCGATGAGATTGTTCTGGCGAATATCGTGCACAAGTTCAACTGGGCATTGCCCGGTGGAGCAAGTGGCGAGGGTTTTGACATGACTGAATCAAATGGCACAACTGTAATCCTAAAGTATCCTCTCAAAGCTGTTGCTCTTCCATATTTAGGTTGA

Protein Analysis

533

Amino Acids

59.59

Weight (kDa)

6.17

Isoelectric Point (pI)

38.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 49 - 502 1.8e-102 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000061)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G48270 AT3G48280 AT3G48290 AT3G48290 AT3G48300 AT3G48300 AT3G48310 AT3G48320 AT4G20235 AT4G20235
fragaria_vesca FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g36190 FvH4_3g14160 FvH4_3g14210 FvH4_3g14260 FvH4_3g14260 FvH4_3g21100 FvH4_3g21380 FvH4_4g24460 FvH4_4g24500 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06572 FvH4_5g06573 FvH4_5g06574 FvH4_5g06575 FvH4_5g06576 FvH4_5g06577 FvH4_5g06577 FvH4_5g07540 FvH4_5g07550 FvH4_5g07560 FvH4_5g07570 FvH4_5g29491 FvH4_5g29492 FvH4_6g23870 FvH4_6g23880 FvH4_6g26870 FvH4_7g11861 FvH4_7g11862 FvH4_7g13050 FvH4_7g13060 FvH4_7g13080 FvH4_7g13080 FvH4_7g22630 FvH4_7g22650 FvH4_7g22651 FvH4_7g23020
malus_domestica MD03G1207400.v1.1 MD03G1214800.v1.1 MD03G1218500.v1.1 MD06G1163100.v1.1 MD06G1163300.v1.1 MD06G1163400.v1.1 MD06G1163500.v1.1 MD06G1163600.v1.1 MD06G1163800.v1.1 MD06G1164000.v1.1 MD06G1164100.v1.1 MD06G1224400.v1.1 MD08G1222800.v1.1 MD08G1222900.v1.1 MD08G1223100.v1.1 MD11G1091500.v1.1 MD11G1091800.v1.1 MD14G1163200.v1.1 MD14G1169000.v1.1 MD15G1207200.v1.1 MD15G1207300.v1.1 MD17G1259400.v1.1
prunus_persica Prupe.4G198100_v2.0.a1 Prupe.4G199100_v2.0.a1 Prupe.4G199400_v2.0.a1 Prupe.4G199800_v2.0.a1 Prupe.4G225200_v2.0.a1 Prupe.4G239100_v2.0.a1 Prupe.5G156600_v2.0.a1 Prupe.5G163500_v2.0.a1 Prupe.7G209500_v2.0.a1 Prupe.I003400_v2.0.a1
pyrus_communis pycom03g16340 pycom06g14600 pycom06g14610 pycom06g14620 pycom06g14630 pycom06g14640 pycom06g14670 pycom06g14690 pycom08g19390 pycom08g19400 pycom08g19410 pycom11g07600 pycom11g07610 pycom11g07620 pycom11g07660 pycom14g13580 pycom14g14080 pycom14g14100 pycom14g14110 pycom15g18380 pycom17g26080
rosa_chinensis RchiOBHm_Chr1g0339441 RchiOBHm_Chr1g0339451 RchiOBHm_Chr1g0352191 RchiOBHm_Chr1g0368221 RchiOBHm_Chr2g0129531 RchiOBHm_Chr2g0129541 RchiOBHm_Chr3g0477631 RchiOBHm_Chr3g0482551 RchiOBHm_Chr3g0482561 RchiOBHm_Chr3g0482571 RchiOBHm_Chr4g0411601 RchiOBHm_Chr4g0422181 RchiOBHm_Chr5g0036661 RchiOBHm_Chr5g0036731 RchiOBHm_Chr6g0274021 RchiOBHm_Chr7g0190921 RchiOBHm_Chr7g0190931 RchiOBHm_Chr7g0190941 RchiOBHm_Chr7g0190951 RchiOBHm_Chr7g0190961 RchiOBHm_Chr7g0190971 RchiOBHm_Chr7g0191001 RchiOBHm_Chr7g0191011 RchiOBHm_Chr7g0191021 RchiOBHm_Chr7g0192181 RchiOBHm_Chr7g0192191 RchiOBHm_Chr7g0192201 RchiOBHm_Chr7g0192221 RchiOBHm_Chr7g0192231 RchiOBHm_Chr7g0192281 RchiOBHm_Chr7g0197311
rosa_laevigata RLG00000003942 RLG00000004345 RLG00000004379 RLG00000004383 RLG00000004384 RLG00000004385 RLG00000004387 RLG00000004388 RLG00000004389 RLG00000004480 RLG00000004481 RLG00000004482 RLG00000004483 RLG00000004485 RLG00000008342 RLG00000008401 RLG00000013583 RLG00000017044 RLG00000027229 RLG00000028349 RLG00000028350 RLG00000028353 RLG00000028820 RLG00000033707 RLG00000033710
rosa_multiflora Rmu_co8020340.1_g000001 Rmu_co8096640.1_g000001 Rmu_co8214930.1_g000001 Rmu_co8223272.1_g000001 Rmu_co8282535.1_g000001 Rmu_co8343567.1_g000001 Rmu_co8404191.1_g000001 Rmu_co8455157.1_g000001 Rmu_sc0000062.1_g000028 Rmu_sc0000082.1_g000091 Rmu_sc0000509.1_g000017 Rmu_sc0000775.1_g000001 Rmu_sc0000999.1_g000034 Rmu_sc0001559.1_g000004 Rmu_sc0001559.1_g000009 Rmu_sc0002164.1_g000001 Rmu_sc0002164.1_g000005 Rmu_sc0002164.1_g000007 Rmu_sc0002164.1_g000008 Rmu_sc0002164.1_g000009 Rmu_sc0002164.1_g000019 Rmu_sc0002247.1_g000009 Rmu_sc0002373.1_g000002 Rmu_sc0002373.1_g000003 Rmu_sc0002944.1_g000059 Rmu_sc0003930.1_g000004 Rmu_sc0004958.1_g000001 Rmu_sc0005197.1_g000014 Rmu_sc0005898.1_g000008 Rmu_sc0005898.1_g000009 Rmu_sc0005898.1_g000015 Rmu_sc0006059.1_g000004 Rmu_sc0006059.1_g000010 Rmu_sc0006903.1_g000007 Rmu_sc0006903.1_g000008 Rmu_sc0006968.1_g000001 Rmu_sc0011009.1_g000009 Rmu_sc0022852.1_g000002 Rmu_sc0033854.1_g000001 Rmu_ssc0000421.1_g000057 Rmu_ssc0000421.1_g000067 Rmu_ssc0000421.1_g000069 Rmu_ssc0000421.1_g000072 Rmu_ssc0000421.1_g000081 Rmu_ssc0000421.1_g000086
rosa_roxburghii Rroxscaffold_158G00443680 Rroxscaffold_158G00443710 Rroxscaffold_158G00443720 Rroxscaffold_158G00443740 Rroxscaffold_1G00034950 Rroxscaffold_1G00044240 Rroxscaffold_1G00044270 Rroxscaffold_3G00241380 Rroxscaffold_3G00247000 Rroxscaffold_3G00263120 Rroxscaffold_3G00263150 Rroxscaffold_3G00263160 Rroxscaffold_3G00263170 Rroxscaffold_3G00263180 Rroxscaffold_3G00263190 Rroxscaffold_3G00263210 Rroxscaffold_3G00263230 Rroxscaffold_3G00263260 Rroxscaffold_3G00264110 Rroxscaffold_3G00264130 Rroxscaffold_3G00264160 Rroxscaffold_3G00264180 Rroxscaffold_3G00264200 Rroxscaffold_4G00288750 Rroxscaffold_4G00303110 Rroxscaffold_4G00303120 Rroxscaffold_4G00322280 Rroxscaffold_5G00356200 Rroxscaffold_6G00399150 Rroxscaffold_6G00399290 Rroxscaffold_7G00194770
rosa_rugosa Rorug01G0225300 Rorug01G0225400 Rorug01G0225800 Rorug01G0226000 Rorug01G0339400 Rorug01G0451500 Rorug03G0196900 Rorug03G0294900 Rorug04G0107500 Rorug04G0107600 Rorug04G0129700 Rorug04G0178000 Rorug05G0144900.1 Rorug05G0145000 Rorug05G0228000 Rorug05G0228600 Rorug06G0078300 Rorug06G0508000 Rorug06G0508100 Rorug06G0508100 Rorug06G0508400 Rorug06G0513400 Rorug07G0000100 Rorug07G0000200 Rorug07G0000300 Rorug07G0000500 Rorug07G0000800
rosa_samantha Rh1BG060400 Rh1BG210300 Rh1BG210700 Rh1BG210800 Rh1BG309800 Rh1CG223800 Rh1CG224200 Rh1CG325200 Rh1DG237000 Rh1DG237400 Rh1DG341600 Rh2DG365700 Rh3AG212500 Rh3AG248400 Rh3CG239800 Rh3DG239300 Rh4AG169300 Rh4BG166200 Rh4BG240500 Rh4BG240600 Rh4DG163600 Rh5AG249600 Rh5AG249900 Rh5AG250000 Rh5CG283100 Rh5CG283200 Rh5CG283400 Rh5DG259200 Rh5DG259800 Rh6BG197700 Rh6CG197800 Rh6DG189400 Rh7AG114900 Rh7AG115000 Rh7AG115200 Rh7AG115300 Rh7AG115400 Rh7AG115500 Rh7AG123900 Rh7AG124100 Rh7AG124300 Rh7BG117200 Rh7BG117400 Rh7BG118400 Rh7BG125400 Rh7BG125600 Rh7BG125700 Rh7BG125800 Rh7BG125900 Rh7BG126000 Rh7BG126400 Rh7BG126600 Rh7BG126700 Rh7BG166200 Rh7DG118600 Rh7DG118700 Rh7DG118900 Rh7DG119000 Rh7DG119100 Rh7DG127400 Rh7DG127600 Rh7DG127700 Rh7DG127900 Rh7DG128200
rosa_wichuraiana Rw1G013270 Rw1G020790 Rw2G027890 Rw2G028040 Rw3G019240 Rw4G014070 Rw4G020540 Rw5G021320 Rw5G022970 Rw6G016920 Rw7G010020 Rw7G010040 Rw7G010580 Rw7G010590 Rw7G010600 Rw7G010610 Rw7G010620 Rw7G010630 Rw7G010640 Rw7G010690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 683
AatII GACGTC 1 cut(s) 848
AccI GTMKAC 1 cut(s) 1220
AccII CGCG 3 cut(s) 71, 585, 1283
AciI CCGC 2 cut(s) 129, 146
AclWI GGATC 3 cut(s) 1070, 1295, 1421
AcoI YGGCCR 1 cut(s) 78
AcsI RAATTY 2 cut(s) 577, 1425
AcyI GRCGYC 1 cut(s) 845
AfaI GTAC 4 cut(s) 416, 644, 1089, 1331
AfiI CCNNNNNNNGG 2 cut(s) 173, 1592
AflIII ACRYGT 2 cut(s) 868, 1281
AgeI ACCGGT 1 cut(s) 58
AgsI TTSAA 4 cut(s) 827, 1156, 1351, 1483
AjnI CCWGG 2 cut(s) 1192, 1211
AluBI AGCT 7 cut(s) 221, 370, 508, 936, 1045, 1403, 1574
AluI AGCT 7 cut(s) 221, 370, 508, 936, 1045, 1403, 1574
Alw21I GWGCWC 1 cut(s) 1476
Alw26I GTCTC 2 cut(s) 289, 1166
Alw44I GTGCAC 1 cut(s) 1472
AlwI GGATC 3 cut(s) 1070, 1295, 1421
Ama87I CYCGRG 1 cut(s) 1420
AoxI GGCC 3 cut(s) 78, 238, 1257
ApaLI GTGCAC 1 cut(s) 1472
ApeKI GCWGC 1 cut(s) 299
ApoI RAATTY 2 cut(s) 577, 1425
ArsI GACNNNNNNTTYG 2 cut(s) 1030, 1062
AsiGI ACCGGT 1 cut(s) 58
Asp700I GAANNNNTTC 2 cut(s) 870, 1379
AspLEI GCGC 1 cut(s) 73
AspS9I GGNCC 3 cut(s) 108, 239, 1196
AsuC2I CCSGG 3 cut(s) 1421, 1422, 1497
AsuHPI GGTGA 3 cut(s) 176, 422, 662
AvaI CYCGRG 1 cut(s) 1420
AvaII GGWCC 2 cut(s) 108, 1196
BaeGI GKGCMC 1 cut(s) 1476
BalI TGGCCA 1 cut(s) 80
BarI GAAGNNNNNNTAC 2 cut(s) 359, 391
Bbv12I GWGCWC 1 cut(s) 1476
BbvI GCAGC 1 cut(s) 286
BccI CCATC 3 cut(s) 157, 176, 365
BceAI ACGGC 1 cut(s) 738
BcgI CGANNNNNNTGC 4 cut(s) 188, 222, 1453, 1487
BciT130I CCWGG 2 cut(s) 1194, 1213
BciVI GTATCC 1 cut(s) 1572
BclI TGATCA 3 cut(s) 513, 1164, 1275
BcnI CCSGG 3 cut(s) 1421, 1422, 1497
BcoDI GTCTC 2 cut(s) 289, 1166
BfaI CTAG 5 cut(s) 218, 632, 812, 1025, 1361
BfuI GTATCC 1 cut(s) 1572
BisI GCNGC 1 cut(s) 300
BlpI GCTNAGC 1 cut(s) 792
BlsI GCNGC 1 cut(s) 301
BmcAI AGTACT 1 cut(s) 416
Bme1390I CCNGG 5 cut(s) 1194, 1213, 1421, 1422, 1497
Bme18I GGWCC 2 cut(s) 108, 1196
BmeT110I CYCGRG 1 cut(s) 1420
BmgT120I GGNCC 3 cut(s) 108, 239, 1196
BmiI GGNNCC 1 cut(s) 40
BmrFI CCNGG 5 cut(s) 1194, 1213, 1421, 1422, 1497
BmrI ACTGGG 2 cut(s) 266, 1495
BmsI GCATC 1 cut(s) 1063
BmuI ACTGGG 2 cut(s) 266, 1495
BoxI GACNNNNGTC 1 cut(s) 349
BpmI CTGGAG 2 cut(s) 439, 1176
Bpu1102I GCTNAGC 1 cut(s) 792
BpuMI CCSGG 3 cut(s) 1421, 1422, 1497
Bsa29I ATCGAT 1 cut(s) 1446
BsaHI GRCGYC 1 cut(s) 845
BsaJI CCNNGG 7 cut(s) 235, 294, 734, 1058, 1211, 1212, 1420
BsaWI WCCGGW 1 cut(s) 58
Bsc4I CCNNNNNNNGG 2 cut(s) 173, 1592
Bse118I RCCGGY 1 cut(s) 58
Bse1I ACTGG 5 cut(s) 117, 272, 422, 1384, 1490
Bse3DI GCAATG 2 cut(s) 1041, 1490
BseBI CCWGG 2 cut(s) 1194, 1213
BseCI ATCGAT 1 cut(s) 1446
BseDI CCNNGG 7 cut(s) 235, 294, 734, 1058, 1211, 1212, 1420
BseGI GGATG 2 cut(s) 1054, 1135
BseLI CCNNNNNNNGG 2 cut(s) 173, 1592
BseMI GCAATG 2 cut(s) 1041, 1490
BseMII CTCAG 1 cut(s) 1032
BseNI ACTGG 5 cut(s) 117, 272, 422, 1384, 1490
BseRI GAGGAG 2 cut(s) 547, 1340
BseSI GKGCMC 1 cut(s) 1476
BseXI GCAGC 1 cut(s) 286
BseYI CCCAGC 1 cut(s) 504
Bsh1236I CGCG 3 cut(s) 71, 585, 1283
Bsh1285I CGRYCG 1 cut(s) 343
BshFI GGCC 3 cut(s) 80, 240, 1259
BshTI ACCGGT 1 cut(s) 58
BshVI ATCGAT 1 cut(s) 1446
BsiEI CGRYCG 1 cut(s) 343
BsiHKAI GWGCWC 1 cut(s) 1476
BsiHKCI CYCGRG 1 cut(s) 1420
BsiSI CCGG 3 cut(s) 59, 1421, 1497
BslFI GGGAC 2 cut(s) 254, 737
BslI CCNNNNNNNGG 2 cut(s) 173, 1592
BsmAI GTCTC 2 cut(s) 289, 1166
BsmFI GGGAC 2 cut(s) 254, 737
BsnI GGCC 3 cut(s) 80, 240, 1259
BsoBI CYCGRG 1 cut(s) 1420
Bsp1286I GDGCHC 1 cut(s) 1476
Bsp143I GATC 8 cut(s) 309, 513, 838, 1062, 1164, 1275, 1300, 1413
Bsp1720I GCTNAGC 1 cut(s) 792
Bsp19I CCATGG 2 cut(s) 235, 734
BspACI CCGC 2 cut(s) 129, 146
BspANI GGCC 3 cut(s) 80, 240, 1259
BspCNI CTCAG 1 cut(s) 1033
BspDI ATCGAT 1 cut(s) 1446
BspFNI CGCG 3 cut(s) 71, 585, 1283
BspHI TCATGA 3 cut(s) 312, 510, 1065
BspLI GGNNCC 1 cut(s) 40
BspPI GGATC 3 cut(s) 1070, 1295, 1421
BspQI GCTCTTC 1 cut(s) 1587
BsrDI GCAATG 2 cut(s) 1041, 1490
BsrFI RCCGGY 1 cut(s) 58
BsrI ACTGG 5 cut(s) 117, 272, 422, 1384, 1490
BssAI RCCGGY 1 cut(s) 58
BssECI CCNNGG 7 cut(s) 235, 294, 734, 1058, 1211, 1212, 1420
BssMI GATC 8 cut(s) 309, 513, 838, 1062, 1164, 1275, 1300, 1413
BssNI GRCGYC 1 cut(s) 845
BssT1I CCWWGG 2 cut(s) 235, 734
Bst2UI CCWGG 2 cut(s) 1194, 1213
Bst4CI ACNGT 3 cut(s) 647, 1358, 1549
Bst6I CTCTTC 6 cut(s) 292, 489, 556, 1182, 1291, 1587
BstACI GRCGYC 1 cut(s) 845
BstC8I GCNNGC 6 cut(s) 197, 372, 771, 1000, 1145, 1405
BstDEI CTNAG 5 cut(s) 5, 672, 792, 982, 1041
BstDSI CCRYGG 2 cut(s) 235, 734
BstF5I GGATG 2 cut(s) 1054, 1135
BstFNI CGCG 3 cut(s) 71, 585, 1283
BstHHI GCGC 1 cut(s) 73
BstKTI GATC 8 cut(s) 312, 516, 841, 1065, 1167, 1278, 1303, 1416
BstMAI GTCTC 2 cut(s) 289, 1166
BstMBI GATC 8 cut(s) 309, 513, 838, 1062, 1164, 1275, 1300, 1413
BstMCI CGRYCG 1 cut(s) 343
BstMWI GCNNNNNNNGC 5 cut(s) 31, 77, 128, 299, 1051
BstNI CCWGG 2 cut(s) 1194, 1213
BstNSI RCATGY 3 cut(s) 773, 872, 1147
BstPAI GACNNNNGTC 1 cut(s) 349
BstSCI CCNGG 5 cut(s) 1192, 1211, 1419, 1420, 1495
BstSLI GKGCMC 1 cut(s) 1476
BstUI CGCG 3 cut(s) 71, 585, 1283
BstV1I GCAGC 1 cut(s) 286
BstX2I RGATCY 2 cut(s) 1300, 1413
BstYI RGATCY 2 cut(s) 1300, 1413
Bsu15I ATCGAT 1 cut(s) 1446
BsuI GTATCC 1 cut(s) 1572
BsuRI GGCC 3 cut(s) 80, 240, 1259
BsuTUI ATCGAT 1 cut(s) 1446
BtgI CCRYGG 2 cut(s) 235, 734
BtgZI GCGATG 2 cut(s) 191, 376
BtsCI GGATG 2 cut(s) 1054, 1135
BtsI GCAGTG 2 cut(s) 1026, 1167
BtsIMutI CAGTG 4 cut(s) 124, 652, 1026, 1167
Cac8I GCNNGC 6 cut(s) 197, 372, 771, 1000, 1145, 1405
CciI TCATGA 3 cut(s) 312, 510, 1065
CfoI GCGC 1 cut(s) 73
Cfr10I RCCGGY 1 cut(s) 58
Cfr13I GGNCC 3 cut(s) 108, 239, 1196
Cfr9I CCCGGG 1 cut(s) 1420
ClaI ATCGAT 1 cut(s) 1446
CseI GACGC 1 cut(s) 607
Csp6I GTAC 4 cut(s) 415, 643, 1088, 1330
CspAI ACCGGT 1 cut(s) 58
CviQI GTAC 4 cut(s) 415, 643, 1088, 1330
DdeI CTNAG 5 cut(s) 5, 672, 792, 982, 1041
DpnI GATC 8 cut(s) 311, 515, 840, 1064, 1166, 1277, 1302, 1415
DpnII GATC 8 cut(s) 309, 513, 838, 1062, 1164, 1275, 1300, 1413
DraI TTTAAA 1 cut(s) 447
EaeI YGGCCR 1 cut(s) 78
Eam1104I CTCTTC 6 cut(s) 292, 489, 556, 1182, 1291, 1587
EarI CTCTTC 6 cut(s) 292, 489, 556, 1182, 1291, 1587
Eco130I CCWWGG 2 cut(s) 235, 734
Eco32I GATATC 1 cut(s) 718
Eco47I GGWCC 2 cut(s) 108, 1196
Eco88I CYCGRG 1 cut(s) 1420
EcoRI GAATTC 1 cut(s) 1425
EcoRII CCWGG 2 cut(s) 1192, 1211
EcoRV GATATC 1 cut(s) 718
EcoT14I CCWWGG 2 cut(s) 235, 734
ErhI CCWWGG 2 cut(s) 235, 734
FaqI GGGAC 2 cut(s) 254, 737
FauNDI CATATG 1 cut(s) 1015
FbaI TGATCA 3 cut(s) 513, 1164, 1275
FblI GTMKAC 1 cut(s) 1220
Fnu4HI GCNGC 1 cut(s) 300
FokI GGATG 2 cut(s) 1041, 1142
Fsp4HI GCNGC 1 cut(s) 300
FspBI CTAG 5 cut(s) 218, 632, 812, 1025, 1361
GlaI GCGC 1 cut(s) 72
GluI GCNGC 1 cut(s) 300
GsaI CCCAGC 1 cut(s) 508
GsuI CTGGAG 2 cut(s) 439, 1176
HaeIII GGCC 3 cut(s) 80, 240, 1259
HapII CCGG 3 cut(s) 59, 1421, 1497
HgaI GACGC 1 cut(s) 607
HhaI GCGC 1 cut(s) 73
Hin1I GRCGYC 1 cut(s) 845
Hin6I GCGC 1 cut(s) 71
HinP1I GCGC 1 cut(s) 71
HincII GTYRAC 1 cut(s) 1221
HindII GTYRAC 1 cut(s) 1221
HindIII AAGCTT 2 cut(s) 368, 934
HinfI GANTC 5 cut(s) 530, 922, 1174, 1290, 1532
HpaII CCGG 3 cut(s) 59, 1421, 1497
HphI GGTGA 3 cut(s) 176, 422, 662
Hpy166II GTNNAC 3 cut(s) 354, 1221, 1474
Hpy188I TCNGA 8 cut(s) 46, 263, 340, 576, 843, 1059, 1103, 1295
Hpy8I GTNNAC 3 cut(s) 354, 1221, 1474
HpyAV CCTTC 4 cut(s) 76, 650, 923, 1150
HpyCH4III ACNGT 3 cut(s) 647, 1358, 1549
HpyCH4IV ACGT 2 cut(s) 845, 1310
HpyF10VI GCNNNNNNNGC 5 cut(s) 31, 77, 128, 299, 1051
HpyF3I CTNAG 5 cut(s) 5, 672, 792, 982, 1041
HpySE526I ACGT 2 cut(s) 845, 1310
Hsp92I GRCGYC 1 cut(s) 845
HspAI GCGC 1 cut(s) 71
Ksp22I TGATCA 3 cut(s) 513, 1164, 1275
Kzo9I GATC 8 cut(s) 309, 513, 838, 1062, 1164, 1275, 1300, 1413
LguI GCTCTTC 1 cut(s) 1587
LmnI GCTCC 2 cut(s) 1400, 1502
Lsp1109I GCAGC 1 cut(s) 286
LweI GCATC 1 cut(s) 1063
MaeI CTAG 5 cut(s) 218, 632, 812, 1025, 1361
MaeII ACGT 2 cut(s) 845, 1310
MaeIII GTNAC 1 cut(s) 595
MalI GATC 8 cut(s) 311, 515, 840, 1064, 1166, 1277, 1302, 1415
MboI GATC 8 cut(s) 309, 513, 838, 1062, 1164, 1275, 1300, 1413
MboII GAAGA 8 cut(s) 279, 506, 543, 665, 676, 1169, 1308, 1574
MflI RGATCY 2 cut(s) 1300, 1413
MhlI GDGCHC 1 cut(s) 1476
MlsI TGGCCA 1 cut(s) 80
MluCI AATT 6 cut(s) 188, 577, 797, 1073, 1119, 1425
MluI ACGCGT 1 cut(s) 1281
MluNI TGGCCA 1 cut(s) 80
MlyI GAGTC 2 cut(s) 524, 1168
MmeI TCCRAC 3 cut(s) 69, 363, 1081
Mox20I TGGCCA 1 cut(s) 80
MroXI GAANNNNTTC 2 cut(s) 870, 1379
MscI TGGCCA 1 cut(s) 80
MseI TTAA 2 cut(s) 446, 1254
MslI CAYNNNNRTG 1 cut(s) 873
Msp20I TGGCCA 1 cut(s) 80
MspI CCGG 3 cut(s) 59, 1421, 1497
MspR9I CCNGG 5 cut(s) 1194, 1213, 1421, 1422, 1497
MvaI CCWGG 2 cut(s) 1194, 1213
MvnI CGCG 3 cut(s) 71, 585, 1283
MwoI GCNNNNNNNGC 5 cut(s) 31, 77, 128, 299, 1051
NciI CCSGG 3 cut(s) 1421, 1422, 1497
NcoI CCATGG 2 cut(s) 235, 734
NdeI CATATG 1 cut(s) 1015
NdeII GATC 8 cut(s) 309, 513, 838, 1062, 1164, 1275, 1300, 1413
NlaIV GGNNCC 1 cut(s) 40
NmeAIII GCCGAG 1 cut(s) 319
NmuCI GTSAC 1 cut(s) 595
NspI RCATGY 3 cut(s) 773, 872, 1147
PaeI GCATGC 2 cut(s) 773, 1147
PagI TCATGA 3 cut(s) 312, 510, 1065
PasI CCCWGGG 1 cut(s) 1212
PciI ACATGT 1 cut(s) 868
PciSI GCTCTTC 1 cut(s) 1587
PcsI WCGNNNNNNNCGW 2 cut(s) 336, 478
PdmI GAANNNNTTC 2 cut(s) 870, 1379
PfeI GAWTC 3 cut(s) 922, 1290, 1532
PinAI ACCGGT 1 cut(s) 58
PkrI GCNGC 1 cut(s) 301
PleI GAGTC 2 cut(s) 524, 1168
PpsI GAGTC 2 cut(s) 524, 1168
PscI ACATGT 1 cut(s) 868
PshAI GACNNNNGTC 1 cut(s) 349
PsiI TTATAA 1 cut(s) 683
Psp6I CCWGG 2 cut(s) 1192, 1211
PspFI CCCAGC 1 cut(s) 504
PspGI CCWGG 2 cut(s) 1192, 1211
PspN4I GGNNCC 1 cut(s) 40
PspPI GGNCC 3 cut(s) 108, 239, 1196
PsuI RGATCY 2 cut(s) 1300, 1413
RsaI GTAC 4 cut(s) 416, 644, 1089, 1331
RsaNI GTAC 4 cut(s) 415, 643, 1088, 1330
RseI CAYNNNNRTG 1 cut(s) 873
SalI GTCGAC 1 cut(s) 1219
SapI GCTCTTC 1 cut(s) 1587
SaqAI TTAA 2 cut(s) 446, 1254
SatI GCNGC 1 cut(s) 300
Sau3AI GATC 8 cut(s) 309, 513, 838, 1062, 1164, 1275, 1300, 1413
Sau96I GGNCC 3 cut(s) 108, 239, 1196
ScaI AGTACT 1 cut(s) 416
SchI GAGTC 2 cut(s) 524, 1168
ScrFI CCNGG 5 cut(s) 1194, 1213, 1421, 1422, 1497
SduI GDGCHC 1 cut(s) 1476
SfaNI GCATC 1 cut(s) 1063
SinI GGWCC 2 cut(s) 108, 1196
SmaI CCCGGG 1 cut(s) 1422
SmiMI CAYNNNNRTG 1 cut(s) 873
SphI GCATGC 2 cut(s) 773, 1147
Sse9I AATT 6 cut(s) 188, 577, 797, 1073, 1119, 1425
SsiI CCGC 2 cut(s) 129, 146
SspMI CTAG 5 cut(s) 218, 632, 812, 1025, 1361
StyD4I CCNGG 5 cut(s) 1192, 1211, 1419, 1420, 1495
StyI CCWWGG 2 cut(s) 235, 734
TaaI ACNGT 3 cut(s) 647, 1358, 1549
TaiI ACGT 2 cut(s) 848, 1313
TaqI TCGA 2 cut(s) 1220, 1446
TaqII GACCGA 1 cut(s) 357
TasI AATT 6 cut(s) 188, 577, 797, 1073, 1119, 1425
TatI WGTACW 2 cut(s) 414, 642
TfiI GAWTC 3 cut(s) 922, 1290, 1532
Tru1I TTAA 2 cut(s) 446, 1254
Tru9I TTAA 2 cut(s) 446, 1254
TscAI CASTG 4 cut(s) 124, 652, 1026, 1167
TseFI GTSAC 1 cut(s) 595
TseI GCWGC 1 cut(s) 299
Tsp45I GTSAC 1 cut(s) 595
TspDTI ATGAA 7 cut(s) 329, 339, 443, 863, 879, 1329, 1378
TspMI CCCGGG 1 cut(s) 1420
TspRI CASTG 4 cut(s) 124, 652, 1026, 1167
VneI GTGCAC 1 cut(s) 1472
VpaK11BI GGWCC 2 cut(s) 108, 1196
XapI RAATTY 2 cut(s) 577, 1425
XbaI TCTAGA 2 cut(s) 811, 1360
XceI RCATGY 3 cut(s) 773, 872, 1147
XcmI CCANNNNNNNNNTGG 1 cut(s) 741
XmaI CCCGGG 1 cut(s) 1420
XmiI GTMKAC 1 cut(s) 1220
XmnI GAANNNNTTC 2 cut(s) 870, 1379
XspI CTAG 5 cut(s) 218, 632, 812, 1025, 1361
ZraI GACGTC 1 cut(s) 846
ZrmI AGTACT 1 cut(s) 416
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.