Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000999.1

Orthogroup ID

OG0000061

Physical Location & Seq

Genomic Coordinates Forward (+)

102725 .. 104204

Gene Structure 1480 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000999.1_g000034.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1227 bp

atgcacctccacttcggaagcttccccgtcctcgtcgtctcgtctcccgaggctgctcaggcgatcatgaaaacacatgacctcacgttcagcagcaggcccgagtccaccgtctccagaaagcttctctacaactcaaaagatgtggccaccgcgccttacggcgaggaagaggaaaccaaagccatgatcaagcagataagggattcaaaaggagtagtgaatttgagggacatgattatgacgcttacacacaatgtcctctcgagagtggctctagggaagagctactacagtgatgggggttttaaagagctttctgttgagcatacgacgttgctgggaagtctttatattggggactatattccatggcttggttggttgagccgtgtcactggtttggacgcgaaactagacaaagtggctaaacggtttgatgacttcttcgatgtagtgattcaagagcatatagattgtactgatcagaaggaggagggcgaaaaggactttatagaccttttacttgagattcagaaggaaaactcgcctggttttcgtattgacagaattggcataaagggtgtcctcatggatatgtttgttgctggggttgataccacagctgtggttctagaatgggccatggctgagatgataaagcacccaagtgtcatgagcaaattgcagaatgaagtaaggggatcagtaaagaaagctgaagacgacatattaacagaggatgatttgatcgatatgcactacttgagggcagtgatcaaggagactcttcgcttgcatcctccgcttccactactattccctaagatatcaaaccaagatgtgaaaataaatggttacaacattaaagccaacacacaagtcatagtgaatgcttggcaagtcgcgagggatcccaagtcgtatgtttacaaaccagaagagttcgagccagaaaggttcttgaatgctaatagtggtttgagttataaaggaactgactttgagttgattccgttcggagctggcaggagattgtgtcccggggttcattttggtacatctgttaatgagattgctctagcaaatttagtgcacaagtttgattggacattgcctggcggagtaacaagtgaagatctagacatgtctgaggcagctagtggtacagtcattcataaagaagaccctcttaaggccgttgctattccatattcatcagcttaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0005911 GO:0006629 GO:0006720 GO:0006721 GO:0006722 GO:0008150 GO:0008152 GO:0009058 GO:0009506 GO:0009507 GO:0009536 GO:0009987 GO:0012505 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0030054 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0055044 GO:0055114 GO:0071704

KEGG Pathways

Metabolic & Signaling

ko00140 ko00380 ko00590 ko00591 ko00830 ko00980 ko01100 ko04212 ko04726 ko04750 ko04913 ko04917 ko04927 ko04934 ko05204 map00140 map00380 map00590 map00591 map00830 map00980 map01100 map04212 map04726 map04750 map04913 map04917 map04927 map04934 map05204

Pfam Domains

Protein Families

p450

Protein Analysis

408

Amino Acids

45.62

Weight (kDa)

5.38

Isoelectric Point (pI)

40.03

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000061)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48270 AT3G48280 AT3G48290 AT3G48290 AT3G48300 AT3G48300 AT3G48310 AT3G48320 AT4G20235 AT4G20235
fragaria_vesca	FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g36190 FvH4_3g14160 FvH4_3g14210 FvH4_3g14260 FvH4_3g14260 FvH4_3g21100 FvH4_3g21380 FvH4_4g24460 FvH4_4g24500 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06572 FvH4_5g06573 FvH4_5g06574 FvH4_5g06575 FvH4_5g06576 FvH4_5g06577 FvH4_5g06577 FvH4_5g07540 FvH4_5g07550 FvH4_5g07560 FvH4_5g07570 FvH4_5g29491 FvH4_5g29492 FvH4_6g23870 FvH4_6g23880 FvH4_6g26870 FvH4_7g11861 FvH4_7g11862 FvH4_7g13050 FvH4_7g13060 FvH4_7g13080 FvH4_7g13080 FvH4_7g22630 FvH4_7g22650 FvH4_7g22651 FvH4_7g23020
malus_domestica	MD03G1207400.v1.1 MD03G1214800.v1.1 MD03G1218500.v1.1 MD06G1163100.v1.1 MD06G1163300.v1.1 MD06G1163400.v1.1 MD06G1163500.v1.1 MD06G1163600.v1.1 MD06G1163800.v1.1 MD06G1164000.v1.1 MD06G1164100.v1.1 MD06G1224400.v1.1 MD08G1222800.v1.1 MD08G1222900.v1.1 MD08G1223100.v1.1 MD11G1091500.v1.1 MD11G1091800.v1.1 MD14G1163200.v1.1 MD14G1169000.v1.1 MD15G1207200.v1.1 MD15G1207300.v1.1 MD17G1259400.v1.1
prunus_persica	Prupe.4G198100_v2.0.a1 Prupe.4G199100_v2.0.a1 Prupe.4G199400_v2.0.a1 Prupe.4G199800_v2.0.a1 Prupe.4G225200_v2.0.a1 Prupe.4G239100_v2.0.a1 Prupe.5G156600_v2.0.a1 Prupe.5G163500_v2.0.a1 Prupe.7G209500_v2.0.a1 Prupe.I003400_v2.0.a1
pyrus_communis	pycom03g16340 pycom06g14600 pycom06g14610 pycom06g14620 pycom06g14630 pycom06g14640 pycom06g14670 pycom06g14690 pycom08g19390 pycom08g19400 pycom08g19410 pycom11g07600 pycom11g07610 pycom11g07620 pycom11g07660 pycom14g13580 pycom14g14080 pycom14g14100 pycom14g14110 pycom15g18380 pycom17g26080
rosa_chinensis	RchiOBHm_Chr1g0339441 RchiOBHm_Chr1g0339451 RchiOBHm_Chr1g0352191 RchiOBHm_Chr1g0368221 RchiOBHm_Chr2g0129531 RchiOBHm_Chr2g0129541 RchiOBHm_Chr3g0477631 RchiOBHm_Chr3g0482551 RchiOBHm_Chr3g0482561 RchiOBHm_Chr3g0482571 RchiOBHm_Chr4g0411601 RchiOBHm_Chr4g0422181 RchiOBHm_Chr5g0036661 RchiOBHm_Chr5g0036731 RchiOBHm_Chr6g0274021 RchiOBHm_Chr7g0190921 RchiOBHm_Chr7g0190931 RchiOBHm_Chr7g0190941 RchiOBHm_Chr7g0190951 RchiOBHm_Chr7g0190961 RchiOBHm_Chr7g0190971 RchiOBHm_Chr7g0191001 RchiOBHm_Chr7g0191011 RchiOBHm_Chr7g0191021 RchiOBHm_Chr7g0192181 RchiOBHm_Chr7g0192191 RchiOBHm_Chr7g0192201 RchiOBHm_Chr7g0192221 RchiOBHm_Chr7g0192231 RchiOBHm_Chr7g0192281 RchiOBHm_Chr7g0197311
rosa_laevigata	RLG00000003942 RLG00000004345 RLG00000004379 RLG00000004383 RLG00000004384 RLG00000004385 RLG00000004387 RLG00000004388 RLG00000004389 RLG00000004480 RLG00000004481 RLG00000004482 RLG00000004483 RLG00000004485 RLG00000008342 RLG00000008401 RLG00000013583 RLG00000017044 RLG00000027229 RLG00000028349 RLG00000028350 RLG00000028353 RLG00000028820 RLG00000033707 RLG00000033710
rosa_multiflora	Rmu_co8020340.1_g000001 Rmu_co8096640.1_g000001 Rmu_co8214930.1_g000001 Rmu_co8223272.1_g000001 Rmu_co8282535.1_g000001 Rmu_co8343567.1_g000001 Rmu_co8404191.1_g000001 Rmu_co8455157.1_g000001 Rmu_sc0000062.1_g000028 Rmu_sc0000082.1_g000091 Rmu_sc0000509.1_g000017 Rmu_sc0000775.1_g000001 Rmu_sc0000999.1_g000034 Rmu_sc0001559.1_g000004 Rmu_sc0001559.1_g000009 Rmu_sc0002164.1_g000001 Rmu_sc0002164.1_g000005 Rmu_sc0002164.1_g000007 Rmu_sc0002164.1_g000008 Rmu_sc0002164.1_g000009 Rmu_sc0002164.1_g000019 Rmu_sc0002247.1_g000009 Rmu_sc0002373.1_g000002 Rmu_sc0002373.1_g000003 Rmu_sc0002944.1_g000059 Rmu_sc0003930.1_g000004 Rmu_sc0004958.1_g000001 Rmu_sc0005197.1_g000014 Rmu_sc0005898.1_g000008 Rmu_sc0005898.1_g000009 Rmu_sc0005898.1_g000015 Rmu_sc0006059.1_g000004 Rmu_sc0006059.1_g000010 Rmu_sc0006903.1_g000007 Rmu_sc0006903.1_g000008 Rmu_sc0006968.1_g000001 Rmu_sc0011009.1_g000009 Rmu_sc0022852.1_g000002 Rmu_sc0033854.1_g000001 Rmu_ssc0000421.1_g000057 Rmu_ssc0000421.1_g000067 Rmu_ssc0000421.1_g000069 Rmu_ssc0000421.1_g000072 Rmu_ssc0000421.1_g000081 Rmu_ssc0000421.1_g000086
rosa_roxburghii	Rroxscaffold_158G00443680 Rroxscaffold_158G00443710 Rroxscaffold_158G00443720 Rroxscaffold_158G00443740 Rroxscaffold_1G00034950 Rroxscaffold_1G00044240 Rroxscaffold_1G00044270 Rroxscaffold_3G00241380 Rroxscaffold_3G00247000 Rroxscaffold_3G00263120 Rroxscaffold_3G00263150 Rroxscaffold_3G00263160 Rroxscaffold_3G00263170 Rroxscaffold_3G00263180 Rroxscaffold_3G00263190 Rroxscaffold_3G00263210 Rroxscaffold_3G00263230 Rroxscaffold_3G00263260 Rroxscaffold_3G00264110 Rroxscaffold_3G00264130 Rroxscaffold_3G00264160 Rroxscaffold_3G00264180 Rroxscaffold_3G00264200 Rroxscaffold_4G00288750 Rroxscaffold_4G00303110 Rroxscaffold_4G00303120 Rroxscaffold_4G00322280 Rroxscaffold_5G00356200 Rroxscaffold_6G00399150 Rroxscaffold_6G00399290 Rroxscaffold_7G00194770
rosa_rugosa	Rorug01G0225300 Rorug01G0225400 Rorug01G0225800 Rorug01G0226000 Rorug01G0339400 Rorug01G0451500 Rorug03G0196900 Rorug03G0294900 Rorug04G0107500 Rorug04G0107600 Rorug04G0129700 Rorug04G0178000 Rorug05G0144900.1 Rorug05G0145000 Rorug05G0228000 Rorug05G0228600 Rorug06G0078300 Rorug06G0508000 Rorug06G0508100 Rorug06G0508100 Rorug06G0508400 Rorug06G0513400 Rorug07G0000100 Rorug07G0000200 Rorug07G0000300 Rorug07G0000500 Rorug07G0000800
rosa_samantha	Rh1BG060400 Rh1BG210300 Rh1BG210700 Rh1BG210800 Rh1BG309800 Rh1CG223800 Rh1CG224200 Rh1CG325200 Rh1DG237000 Rh1DG237400 Rh1DG341600 Rh2DG365700 Rh3AG212500 Rh3AG248400 Rh3CG239800 Rh3DG239300 Rh4AG169300 Rh4BG166200 Rh4BG240500 Rh4BG240600 Rh4DG163600 Rh5AG249600 Rh5AG249900 Rh5AG250000 Rh5CG283100 Rh5CG283200 Rh5CG283400 Rh5DG259200 Rh5DG259800 Rh6BG197700 Rh6CG197800 Rh6DG189400 Rh7AG114900 Rh7AG115000 Rh7AG115200 Rh7AG115300 Rh7AG115400 Rh7AG115500 Rh7AG123900 Rh7AG124100 Rh7AG124300 Rh7BG117200 Rh7BG117400 Rh7BG118400 Rh7BG125400 Rh7BG125600 Rh7BG125700 Rh7BG125800 Rh7BG125900 Rh7BG126000 Rh7BG126400 Rh7BG126600 Rh7BG126700 Rh7BG166200 Rh7DG118600 Rh7DG118700 Rh7DG118900 Rh7DG119000 Rh7DG119100 Rh7DG127400 Rh7DG127600 Rh7DG127700 Rh7DG127900 Rh7DG128200
rosa_wichuraiana	Rw1G013270 Rw1G020790 Rw2G027890 Rw2G028040 Rw3G019240 Rw4G014070 Rw4G020540 Rw5G021320 Rw5G022970 Rw6G016920 Rw7G010020 Rw7G010040 Rw7G010580 Rw7G010590 Rw7G010600 Rw7G010610 Rw7G010620 Rw7G010630 Rw7G010640 Rw7G010690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	990
AccB7I	CCANNNNNTGG	1 cut(s)	377
AccII	CGCG	3 cut(s)	155, 410, 908
AciI	CCGC	3 cut(s)	153, 806, 1122
AclWI	GGATC	3 cut(s)	712, 908, 921
AcoI	YGGCCR	1 cut(s)	147
AcsI	RAATTY	2 cut(s)	223, 1087
AcuI	CTGAAG	1 cut(s)	741
AfaI	GTAC	3 cut(s)	481, 1060, 1168
AfiI	CCNNNNNNNGG	2 cut(s)	377, 1195
AflII	CTTAAG	1 cut(s)	1193
AflIII	ACRYGT	1 cut(s)	1146
AgsI	TTSAA	3 cut(s)	210, 464, 967
AjnI	CCWGG	2 cut(s)	550, 1117
AleI	CACNNNNGTG	2 cut(s)	626, 669
AluBI	AGCT	9 cut(s)	21, 124, 288, 316, 626, 719, 1025, 1160, 1223
AluI	AGCT	9 cut(s)	21, 124, 288, 316, 626, 719, 1025, 1160, 1223
Alw21I	GWGCWC	1 cut(s)	1098
Alw26I	GTCTC	4 cut(s)	43, 48, 118, 779
Alw44I	GTGCAC	1 cut(s)	1094
AlwI	GGATC	3 cut(s)	712, 908, 921
Ama87I	CYCGRG	4 cut(s)	47, 101, 265, 1043
AoxI	GGCC	4 cut(s)	98, 147, 642, 1197
ApaLI	GTGCAC	1 cut(s)	1094
ApeKI	GCWGC	3 cut(s)	53, 93, 1157
ApoI	RAATTY	2 cut(s)	223, 1087
AspLEI	GCGC	1 cut(s)	157
AspS9I	GGNCC	2 cut(s)	99, 642
AsuC2I	CCSGG	2 cut(s)	1044, 1045
AvaI	CYCGRG	4 cut(s)	47, 101, 265, 1043
BaeGI	GKGCMC	1 cut(s)	1098
BaeI	ACNNNNGTAYC	2 cut(s)	1050, 1083
BalI	TGGCCA	1 cut(s)	149
BamHI	GGATCC	1 cut(s)	913
BarI	GAAGNNNNNNTAC	2 cut(s)	275, 307
BbsI	GAAGAC	2 cut(s)	729, 1191
Bbv12I	GWGCWC	1 cut(s)	1098
BbvI	GCAGC	3 cut(s)	40, 105, 1169
BccI	CCATC	1 cut(s)	293
BceAI	ACGGC	3 cut(s)	178, 375, 1184
BciT130I	CCWGG	2 cut(s)	552, 1119
BclI	TGATCA	3 cut(s)	189, 484, 777
BcnI	CCSGG	2 cut(s)	1044, 1045
BcoDI	GTCTC	4 cut(s)	43, 48, 118, 779
BfaI	CTAG	6 cut(s)	278, 416, 635, 1082, 1142, 1161
BfmI	CTRYAG	1 cut(s)	292
BfrI	CTTAAG	1 cut(s)	1193
BglII	AGATCT	1 cut(s)	1138
BisI	GCNGC	3 cut(s)	54, 94, 1158
BlsI	GCNGC	3 cut(s)	55, 95, 1159
Bme1390I	CCNGG	4 cut(s)	552, 1044, 1045, 1119
BmeT110I	CYCGRG	4 cut(s)	47, 101, 265, 1043
BmgT120I	GGNCC	2 cut(s)	99, 642
BmiI	GGNNCC	1 cut(s)	915
BmrFI	CCNGG	4 cut(s)	552, 1044, 1045, 1119
BmsI	GCATC	1 cut(s)	808
BpiI	GAAGAC	2 cut(s)	729, 1191
BplI	GAGNNNNNCTC	2 cut(s)	259, 291
BpmI	CTGGAG	1 cut(s)	100
Bpu10I	CCTNAGC	1 cut(s)	57
BpuEI	CTTGAG	2 cut(s)	548, 787
BpuMI	CCSGG	2 cut(s)	1044, 1045
Bsa29I	ATCGAT	1 cut(s)	753
BsaJI	CCNNGG	5 cut(s)	48, 371, 645, 1043, 1044
BsaXI	ACNNNNNCTCC	2 cut(s)	1024, 1054
Bsc4I	CCNNNNNNNGG	2 cut(s)	377, 1195
Bse1I	ACTGG	1 cut(s)	403
Bse3DI	GCAATG	1 cut(s)	1112
BseBI	CCWGG	2 cut(s)	552, 1119
BseCI	ATCGAT	1 cut(s)	753
BseDI	CCNNGG	5 cut(s)	48, 371, 645, 1043, 1044
BseGI	GGATG	2 cut(s)	748, 799
BseLI	CCNNNNNNNGG	2 cut(s)	377, 1195
BseMI	GCAATG	1 cut(s)	1112
BseMII	CTCAG	3 cut(s)	71, 642, 1143
BseNI	ACTGG	1 cut(s)	403
BseRI	GAGGAG	1 cut(s)	509
BseSI	GKGCMC	1 cut(s)	1098
BseXI	GCAGC	3 cut(s)	40, 105, 1169
BseYI	CCCAGC	2 cut(s)	340, 608
Bsh1236I	CGCG	3 cut(s)	155, 410, 908
BshFI	GGCC	4 cut(s)	100, 149, 644, 1199
BshVI	ATCGAT	1 cut(s)	753
BsiHKAI	GWGCWC	1 cut(s)	1098
BsiHKCI	CYCGRG	4 cut(s)	47, 101, 265, 1043
BsiSI	CCGG	1 cut(s)	1044
BslFI	GGGAC	3 cut(s)	245, 374, 1026
BslI	CCNNNNNNNGG	2 cut(s)	377, 1195
BsmAI	GTCTC	4 cut(s)	43, 48, 118, 779
BsmBI	CGTCTC	3 cut(s)	43, 48, 118
BsmFI	GGGAC	3 cut(s)	245, 374, 1026
BsmI	GAATGC	2 cut(s)	898, 973
BsnI	GGCC	4 cut(s)	100, 149, 644, 1199
BsoBI	CYCGRG	4 cut(s)	47, 101, 265, 1043
Bsp1286I	GDGCHC	1 cut(s)	1098
Bsp143I	GATC	8 cut(s)	63, 189, 484, 704, 750, 777, 913, 1138
Bsp19I	CCATGG	2 cut(s)	371, 645
Bsp68I	TCGCGA	1 cut(s)	908
BspACI	CCGC	3 cut(s)	153, 806, 1122
BspANI	GGCC	4 cut(s)	100, 149, 644, 1199
BspCNI	CTCAG	3 cut(s)	70, 643, 1144
BspDI	ATCGAT	1 cut(s)	753
BspFNI	CGCG	3 cut(s)	155, 410, 908
BspHI	TCATGA	2 cut(s)	66, 675
BspLI	GGNNCC	1 cut(s)	915
BspPI	GGATC	3 cut(s)	712, 908, 921
BspQI	GCTCTTC	1 cut(s)	278
BspTI	CTTAAG	1 cut(s)	1193
BsrDI	GCAATG	1 cut(s)	1112
BsrI	ACTGG	1 cut(s)	403
BssECI	CCNNGG	5 cut(s)	48, 371, 645, 1043, 1044
BssMI	GATC	8 cut(s)	63, 189, 484, 704, 750, 777, 913, 1138
BssT1I	CCWWGG	2 cut(s)	371, 645
Bst2UI	CCWGG	2 cut(s)	552, 1119
Bst4CI	ACNGT	4 cut(s)	112, 296, 435, 1171
Bst6I	CTCTTC	4 cut(s)	165, 278, 795, 936
BstAFI	CTTAAG	1 cut(s)	1193
BstC8I	GCNNGC	3 cut(s)	98, 797, 1027
BstDEI	CTNAG	4 cut(s)	57, 651, 825, 1152
BstDSI	CCRYGG	2 cut(s)	371, 645
BstF5I	GGATG	2 cut(s)	748, 799
BstFNI	CGCG	3 cut(s)	155, 410, 908
BstHHI	GCGC	1 cut(s)	157
BstKTI	GATC	8 cut(s)	66, 192, 487, 707, 753, 780, 916, 1141
BstMAI	GTCTC	4 cut(s)	43, 48, 118, 779
BstMBI	GATC	8 cut(s)	63, 189, 484, 704, 750, 777, 913, 1138
BstMWI	GCNNNNNNNGC	2 cut(s)	59, 805
BstNI	CCWGG	2 cut(s)	552, 1119
BstNSI	RCATGY	1 cut(s)	1150
BstSCI	CCNGG	4 cut(s)	550, 1042, 1043, 1117
BstSFI	CTRYAG	1 cut(s)	292
BstSLI	GKGCMC	1 cut(s)	1098
BstUI	CGCG	3 cut(s)	155, 410, 908
BstV1I	GCAGC	3 cut(s)	40, 105, 1169
BstV2I	GAAGAC	2 cut(s)	729, 1191
BstX2I	RGATCY	2 cut(s)	913, 1138
BstXI	CCANNNNNNTGG	1 cut(s)	628
BstYI	RGATCY	2 cut(s)	913, 1138
Bsu15I	ATCGAT	1 cut(s)	753
BsuRI	GGCC	4 cut(s)	100, 149, 644, 1199
BsuTUI	ATCGAT	1 cut(s)	753
BtgI	CCRYGG	2 cut(s)	371, 645
BtsCI	GGATG	2 cut(s)	748, 799
BtsI	GCAGTG	1 cut(s)	780
BtsIMutI	CAGTG	3 cut(s)	301, 396, 780
BtuMI	TCGCGA	1 cut(s)	908
Cac8I	GCNNGC	3 cut(s)	98, 797, 1027
CciI	TCATGA	2 cut(s)	66, 675
CfoI	GCGC	1 cut(s)	157
Cfr13I	GGNCC	2 cut(s)	99, 642
Cfr9I	CCCGGG	1 cut(s)	1043
ClaI	ATCGAT	1 cut(s)	753
CseI	GACGC	2 cut(s)	253, 416
Csp6I	GTAC	3 cut(s)	480, 1059, 1167
CspCI	CAANNNNNGTGG	2 cut(s)	126, 161
CviAII	CATG	9 cut(s)	67, 77, 187, 235, 372, 592, 646, 676, 1147
CviQI	GTAC	3 cut(s)	480, 1059, 1167
DdeI	CTNAG	4 cut(s)	57, 651, 825, 1152
DpnI	GATC	8 cut(s)	65, 191, 486, 706, 752, 779, 915, 1140
DpnII	GATC	8 cut(s)	63, 189, 484, 704, 750, 777, 913, 1138
DraI	TTTAAA	1 cut(s)	310
EaeI	YGGCCR	1 cut(s)	147
Eam1104I	CTCTTC	4 cut(s)	165, 278, 795, 936
EarI	CTCTTC	4 cut(s)	165, 278, 795, 936
EciI	GGCGGA	1 cut(s)	1137
Eco130I	CCWWGG	2 cut(s)	371, 645
Eco32I	GATATC	1 cut(s)	831
Eco57I	CTGAAG	1 cut(s)	741
Eco88I	CYCGRG	4 cut(s)	47, 101, 265, 1043
EcoRII	CCWGG	2 cut(s)	550, 1117
EcoRV	GATATC	1 cut(s)	831
EcoT14I	CCWWGG	2 cut(s)	371, 645
ErhI	CCWWGG	2 cut(s)	371, 645
Esp3I	CGTCTC	3 cut(s)	43, 48, 118
FaeI	CATG	9 cut(s)	70, 80, 190, 238, 375, 595, 649, 679, 1150
FalI	AAGNNNNNCTT	2 cut(s)	1176, 1208
FaqI	GGGAC	3 cut(s)	245, 374, 1026
FatI	CATG	9 cut(s)	66, 76, 186, 234, 371, 591, 645, 675, 1146
FbaI	TGATCA	3 cut(s)	189, 484, 777
Fnu4HI	GCNGC	3 cut(s)	54, 94, 1158
FokI	GGATG	2 cut(s)	755, 786
Fsp4HI	GCNGC	3 cut(s)	54, 94, 1158
FspBI	CTAG	6 cut(s)	278, 416, 635, 1082, 1142, 1161
GlaI	GCGC	1 cut(s)	156
GluI	GCNGC	3 cut(s)	54, 94, 1158
GsaI	CCCAGC	2 cut(s)	344, 612
GsuI	CTGGAG	1 cut(s)	100
HaeIII	GGCC	4 cut(s)	100, 149, 644, 1199
HapII	CCGG	1 cut(s)	1044
HgaI	GACGC	2 cut(s)	253, 416
HhaI	GCGC	1 cut(s)	157
Hin1II	CATG	9 cut(s)	70, 80, 190, 238, 375, 595, 649, 679, 1150
Hin6I	GCGC	1 cut(s)	155
HinP1I	GCGC	1 cut(s)	155
HindIII	AAGCTT	2 cut(s)	19, 122
HinfI	GANTC	6 cut(s)	104, 206, 460, 532, 787, 1012
HpaII	CCGG	1 cut(s)	1044
Hpy166II	GTNNAC	3 cut(s)	108, 931, 1096
Hpy188I	TCNGA	5 cut(s)	17, 489, 537, 1022, 1153
Hpy8I	GTNNAC	3 cut(s)	108, 931, 1096
Hpy99I	CGWCG	2 cut(s)	38, 337
HpyAV	CCTTC	2 cut(s)	484, 532
HpyCH4III	ACNGT	4 cut(s)	112, 296, 435, 1171
HpyCH4IV	ACGT	2 cut(s)	86, 335
HpyCH4V	TGCA	5 cut(s)	4, 688, 760, 799, 1096
HpyF10VI	GCNNNNNNNGC	2 cut(s)	59, 805
HpyF3I	CTNAG	4 cut(s)	57, 651, 825, 1152
HpySE526I	ACGT	2 cut(s)	86, 335
Hsp92II	CATG	9 cut(s)	70, 80, 190, 238, 375, 595, 649, 679, 1150
HspAI	GCGC	1 cut(s)	155
Ksp22I	TGATCA	3 cut(s)	189, 484, 777
Kzo9I	GATC	8 cut(s)	63, 189, 484, 704, 750, 777, 913, 1138
LguI	GCTCTTC	1 cut(s)	278
LmnI	GCTCC	1 cut(s)	1022
Lsp1109I	GCAGC	3 cut(s)	40, 105, 1169
LweI	GCATC	1 cut(s)	808
MaeI	CTAG	6 cut(s)	278, 416, 635, 1082, 1142, 1161
MaeII	ACGT	2 cut(s)	86, 335
MaeIII	GTNAC	3 cut(s)	394, 857, 1126
MalI	GATC	8 cut(s)	65, 191, 486, 706, 752, 779, 915, 1140
MboI	GATC	8 cut(s)	63, 189, 484, 704, 750, 777, 913, 1138
MboII	GAAGA	8 cut(s)	182, 295, 439, 734, 782, 953, 1148, 1196
MflI	RGATCY	2 cut(s)	913, 1138
MhlI	GDGCHC	1 cut(s)	1098
MlsI	TGGCCA	1 cut(s)	149
MluCI	AATT	4 cut(s)	223, 570, 683, 1087
MluNI	TGGCCA	1 cut(s)	149
MlyI	GAGTC	2 cut(s)	113, 781
Mox20I	TGGCCA	1 cut(s)	149
MscI	TGGCCA	1 cut(s)	149
MseI	TTAA	6 cut(s)	309, 734, 867, 1068, 1194, 1225
MslI	CAYNNNNRTG	4 cut(s)	239, 596, 626, 669
Msp20I	TGGCCA	1 cut(s)	149
MspA1I	CMGCKG	1 cut(s)	626
MspCI	CTTAAG	1 cut(s)	1193
MspI	CCGG	1 cut(s)	1044
MspR9I	CCNGG	4 cut(s)	552, 1044, 1045, 1119
Mva1269I	GAATGC	2 cut(s)	898, 973
MvaI	CCWGG	2 cut(s)	552, 1119
MvnI	CGCG	3 cut(s)	155, 410, 908
MwoI	GCNNNNNNNGC	2 cut(s)	59, 805
NciI	CCSGG	2 cut(s)	1044, 1045
NcoI	CCATGG	2 cut(s)	371, 645
NdeII	GATC	8 cut(s)	63, 189, 484, 704, 750, 777, 913, 1138
NlaIII	CATG	9 cut(s)	70, 80, 190, 238, 375, 595, 649, 679, 1150
NlaIV	GGNNCC	1 cut(s)	915
NmuCI	GTSAC	1 cut(s)	394
NruI	TCGCGA	1 cut(s)	908
NspI	RCATGY	1 cut(s)	1150
OliI	CACNNNNGTG	2 cut(s)	626, 669
PaeR7I	CTCGAG	1 cut(s)	265
PagI	TCATGA	2 cut(s)	66, 675
PciI	ACATGT	1 cut(s)	1146
PciSI	GCTCTTC	1 cut(s)	278
PctI	GAATGC	2 cut(s)	898, 973
PfeI	GAWTC	4 cut(s)	206, 460, 532, 1012
PflMI	CCANNNNNTGG	1 cut(s)	377
PkrI	GCNGC	3 cut(s)	55, 95, 1159
PleI	GAGTC	2 cut(s)	112, 781
PpsI	GAGTC	2 cut(s)	112, 781
PscI	ACATGT	1 cut(s)	1146
PsiI	TTATAA	1 cut(s)	990
Psp6I	CCWGG	2 cut(s)	550, 1117
PspFI	CCCAGC	2 cut(s)	340, 608
PspGI	CCWGG	2 cut(s)	550, 1117
PspN4I	GGNNCC	1 cut(s)	915
PspPI	GGNCC	2 cut(s)	99, 642
PsuI	RGATCY	2 cut(s)	913, 1138
PvuII	CAGCTG	1 cut(s)	626
RruI	TCGCGA	1 cut(s)	908
RsaI	GTAC	3 cut(s)	481, 1060, 1168
RsaNI	GTAC	3 cut(s)	480, 1059, 1167
RseI	CAYNNNNRTG	4 cut(s)	239, 596, 626, 669
SapI	GCTCTTC	1 cut(s)	278
SaqAI	TTAA	6 cut(s)	309, 734, 867, 1068, 1194, 1225
SatI	GCNGC	3 cut(s)	54, 94, 1158
Sau3AI	GATC	8 cut(s)	63, 189, 484, 704, 750, 777, 913, 1138
Sau96I	GGNCC	2 cut(s)	99, 642
SchI	GAGTC	2 cut(s)	113, 781
ScrFI	CCNGG	4 cut(s)	552, 1044, 1045, 1119
SduI	GDGCHC	1 cut(s)	1098
SfaNI	GCATC	1 cut(s)	808
SfcI	CTRYAG	1 cut(s)	292
Sfr274I	CTCGAG	1 cut(s)	265
SlaI	CTCGAG	1 cut(s)	265
SmaI	CCCGGG	1 cut(s)	1045
SmiMI	CAYNNNNRTG	4 cut(s)	239, 596, 626, 669
SmlI	CTYRAG	4 cut(s)	265, 527, 766, 1193
SmoI	CTYRAG	4 cut(s)	265, 527, 766, 1193
Sse9I	AATT	4 cut(s)	223, 570, 683, 1087
SsiI	CCGC	3 cut(s)	153, 806, 1122
SspMI	CTAG	6 cut(s)	278, 416, 635, 1082, 1142, 1161
StyD4I	CCNGG	4 cut(s)	550, 1042, 1043, 1117
StyI	CCWWGG	2 cut(s)	371, 645
TaaI	ACNGT	4 cut(s)	112, 296, 435, 1171
TaiI	ACGT	2 cut(s)	89, 338
TaqI	TCGA	4 cut(s)	266, 450, 753, 948
TasI	AATT	4 cut(s)	223, 570, 683, 1087
TatI	WGTACW	1 cut(s)	479
TfiI	GAWTC	4 cut(s)	206, 460, 532, 1012
Tru1I	TTAA	6 cut(s)	309, 734, 867, 1068, 1194, 1225
Tru9I	TTAA	6 cut(s)	309, 734, 867, 1068, 1194, 1225
TscAI	CASTG	3 cut(s)	301, 403, 780
TseFI	GTSAC	1 cut(s)	394
TseI	GCWGC	3 cut(s)	53, 93, 1157
Tsp45I	GTSAC	1 cut(s)	394
TspDTI	ATGAA	5 cut(s)	83, 708, 1040, 1166, 1206
TspGWI	ACGGA	1 cut(s)	1005
TspMI	CCCGGG	1 cut(s)	1043
TspRI	CASTG	3 cut(s)	301, 403, 780
Van91I	CCANNNNNTGG	1 cut(s)	377
Vha464I	CTTAAG	1 cut(s)	1193
VneI	GTGCAC	1 cut(s)	1094
XapI	RAATTY	2 cut(s)	223, 1087
XbaI	TCTAGA	2 cut(s)	634, 1141
XceI	RCATGY	1 cut(s)	1150
XcmI	CCANNNNNNNNNTGG	1 cut(s)	378
XhoI	CTCGAG	1 cut(s)	265
XmaI	CCCGGG	1 cut(s)	1043
XspI	CTAG	6 cut(s)	278, 416, 635, 1082, 1142, 1161

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.