Cytochrome p450
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Pyr_redox_3 | PF13738 | 18 - 209 | 1.2e-26 | Pyridine nucleotide-disulphide oxidoreductase |
| Pyr_redox_2 | PF07992 | 18 - 198 | 1.3e-09 | Pyridine nucleotide-disulphide oxidoreductase |
| FMO-like | PF00743 | 19 - 330 | 3.9e-28 | Flavin-binding monooxygenase-like |
| Lys_Orn_oxgnase | PF13434 | 83 - 209 | 1.1e-12 | L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 75 |
| AccIII | TCCGGA | 1 cut(s) | 1109 |
| AciI | CCGC | 2 cut(s) | 781, 812 |
| AclWI | GGATC | 3 cut(s) | 718, 731, 771 |
| AcoI | YGGCCR | 2 cut(s) | 417, 813 |
| AcsI | RAATTY | 2 cut(s) | 556, 920 |
| AcuI | CTGAAG | 1 cut(s) | 255 |
| AcyI | GRCGYC | 3 cut(s) | 111, 356, 1125 |
| AfaI | GTAC | 5 cut(s) | 263, 395, 503, 974, 1121 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 32, 224, 613, 733, 791 |
| AgsI | TTSAA | 3 cut(s) | 44, 322, 887 |
| AjnI | CCWGG | 1 cut(s) | 324 |
| AluBI | AGCT | 6 cut(s) | 89, 149, 214, 576, 805, 1053 |
| AluI | AGCT | 6 cut(s) | 89, 149, 214, 576, 805, 1053 |
| Alw21I | GWGCWC | 1 cut(s) | 807 |
| Alw26I | GTCTC | 1 cut(s) | 83 |
| AlwI | GGATC | 3 cut(s) | 718, 731, 771 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 89 |
| Aor13HI | TCCGGA | 1 cut(s) | 1109 |
| AoxI | GGCC | 8 cut(s) | 47, 327, 417, 772, 782, 793, 813, 1102 |
| ApeKI | GCWGC | 2 cut(s) | 89, 341 |
| ApoI | RAATTY | 2 cut(s) | 556, 920 |
| AspS9I | GGNCC | 5 cut(s) | 47, 68, 772, 783, 794 |
| AsuC2I | CCSGG | 2 cut(s) | 403, 830 |
| AsuHPI | GGTGA | 2 cut(s) | 454, 1009 |
| AvaII | GGWCC | 1 cut(s) | 68 |
| BalI | TGGCCA | 1 cut(s) | 419 |
| BamHI | GGATCC | 1 cut(s) | 723 |
| BanII | GRGCYC | 1 cut(s) | 807 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1177, 1209 |
| BauI | CACGAG | 2 cut(s) | 221, 713 |
| BbsI | GAAGAC | 1 cut(s) | 1169 |
| Bbv12I | GWGCWC | 1 cut(s) | 807 |
| BbvI | GCAGC | 2 cut(s) | 76, 328 |
| BccI | CCATC | 2 cut(s) | 79, 1064 |
| BceAI | ACGGC | 3 cut(s) | 314, 1112, 1131 |
| BciT130I | CCWGG | 1 cut(s) | 326 |
| BcnI | CCSGG | 2 cut(s) | 403, 830 |
| BcoDI | GTCTC | 1 cut(s) | 83 |
| BfaI | CTAG | 2 cut(s) | 741, 1050 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 994 |
| BisI | GCNGC | 4 cut(s) | 90, 342, 782, 813 |
| BlsI | GCNGC | 4 cut(s) | 91, 343, 783, 814 |
| Bme1390I | CCNGG | 3 cut(s) | 326, 403, 830 |
| Bme18I | GGWCC | 1 cut(s) | 68 |
| BmgT120I | GGNCC | 5 cut(s) | 47, 68, 772, 783, 794 |
| BmiI | GGNNCC | 3 cut(s) | 230, 725, 916 |
| BmrFI | CCNGG | 3 cut(s) | 326, 403, 830 |
| BmrI | ACTGGG | 1 cut(s) | 978 |
| BmuI | ACTGGG | 1 cut(s) | 978 |
| BpiI | GAAGAC | 1 cut(s) | 1169 |
| BpmI | CTGGAG | 1 cut(s) | 388 |
| BpuEI | CTTGAG | 2 cut(s) | 149, 983 |
| BpuMI | CCSGG | 2 cut(s) | 403, 830 |
| BsaHI | GRCGYC | 3 cut(s) | 111, 356, 1125 |
| BsaI | GGTCTC | 1 cut(s) | 83 |
| BsaJI | CCNNGG | 5 cut(s) | 106, 314, 420, 644, 828 |
| BsaWI | WCCGGW | 3 cut(s) | 703, 818, 1109 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 32, 224, 613, 733, 791 |
| Bse118I | RCCGGY | 2 cut(s) | 439, 791 |
| Bse1I | ACTGG | 4 cut(s) | 265, 495, 738, 973 |
| Bse3DI | GCAATG | 3 cut(s) | 687, 988, 1146 |
| BseAI | TCCGGA | 1 cut(s) | 1109 |
| BseBI | CCWGG | 1 cut(s) | 326 |
| BseDI | CCNNGG | 5 cut(s) | 106, 314, 420, 644, 828 |
| BseGI | GGATG | 1 cut(s) | 1212 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 32, 224, 613, 733, 791 |
| BseMI | GCAATG | 3 cut(s) | 687, 988, 1146 |
| BseNI | ACTGG | 4 cut(s) | 265, 495, 738, 973 |
| BseXI | GCAGC | 2 cut(s) | 76, 328 |
| BsgI | GTGCAG | 1 cut(s) | 84 |
| BshFI | GGCC | 8 cut(s) | 49, 329, 419, 774, 784, 795, 815, 1104 |
| BsiHKAI | GWGCWC | 1 cut(s) | 807 |
| BsiSI | CCGG | 9 cut(s) | 403, 440, 704, 778, 792, 819, 830, 867, 1110 |
| BsiWI | CGTACG | 1 cut(s) | 1119 |
| BslFI | GGGAC | 1 cut(s) | 98 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 32, 224, 613, 733, 791 |
| BsmAI | GTCTC | 1 cut(s) | 83 |
| BsmFI | GGGAC | 1 cut(s) | 98 |
| BsmI | GAATGC | 1 cut(s) | 1035 |
| BsnI | GGCC | 8 cut(s) | 49, 329, 419, 774, 784, 795, 815, 1104 |
| Bso31I | GGTCTC | 1 cut(s) | 83 |
| Bsp1286I | GDGCHC | 1 cut(s) | 807 |
| Bsp13I | TCCGGA | 1 cut(s) | 1109 |
| Bsp1407I | TGTACA | 1 cut(s) | 501 |
| Bsp143I | GATC | 3 cut(s) | 590, 723, 763 |
| Bsp19I | CCATGG | 1 cut(s) | 106 |
| BspACI | CCGC | 2 cut(s) | 781, 812 |
| BspANI | GGCC | 8 cut(s) | 49, 329, 419, 774, 784, 795, 815, 1104 |
| BspEI | TCCGGA | 1 cut(s) | 1109 |
| BspLI | GGNNCC | 3 cut(s) | 230, 725, 916 |
| BspPI | GGATC | 3 cut(s) | 718, 731, 771 |
| BspTNI | GGTCTC | 1 cut(s) | 83 |
| BsrDI | GCAATG | 3 cut(s) | 687, 988, 1146 |
| BsrFI | RCCGGY | 2 cut(s) | 439, 791 |
| BsrGI | TGTACA | 1 cut(s) | 501 |
| BsrI | ACTGG | 4 cut(s) | 265, 495, 738, 973 |
| BssAI | RCCGGY | 2 cut(s) | 439, 791 |
| BssECI | CCNNGG | 5 cut(s) | 106, 314, 420, 644, 828 |
| BssMI | GATC | 3 cut(s) | 590, 723, 763 |
| BssNI | GRCGYC | 3 cut(s) | 111, 356, 1125 |
| BssSI | CACGAG | 2 cut(s) | 221, 713 |
| BssT1I | CCWWGG | 2 cut(s) | 106, 644 |
| Bst2BI | CACGAG | 2 cut(s) | 221, 713 |
| Bst2UI | CCWGG | 1 cut(s) | 326 |
| Bst4CI | ACNGT | 3 cut(s) | 204, 631, 1084 |
| BstACI | GRCGYC | 3 cut(s) | 111, 356, 1125 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 89 |
| BstAUI | TGTACA | 1 cut(s) | 501 |
| BstC8I | GCNNGC | 2 cut(s) | 94, 212 |
| BstDEI | CTNAG | 1 cut(s) | 577 |
| BstDSI | CCRYGG | 2 cut(s) | 106, 420 |
| BstF5I | GGATG | 1 cut(s) | 1212 |
| BstKTI | GATC | 3 cut(s) | 593, 726, 766 |
| BstMAI | GTCTC | 1 cut(s) | 83 |
| BstMBI | GATC | 3 cut(s) | 590, 723, 763 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 89, 994, 1039, 1124 |
| BstNI | CCWGG | 1 cut(s) | 326 |
| BstNSI | RCATGY | 1 cut(s) | 638 |
| BstSCI | CCNGG | 3 cut(s) | 324, 401, 828 |
| BstV1I | GCAGC | 2 cut(s) | 76, 328 |
| BstV2I | GAAGAC | 1 cut(s) | 1169 |
| BstX2I | RGATCY | 1 cut(s) | 723 |
| BstYI | RGATCY | 1 cut(s) | 723 |
| BsuRI | GGCC | 8 cut(s) | 49, 329, 419, 774, 784, 795, 815, 1104 |
| BtgI | CCRYGG | 2 cut(s) | 106, 420 |
| BtsCI | GGATG | 1 cut(s) | 1212 |
| BtsIMutI | CAGTG | 1 cut(s) | 627 |
| Cac8I | GCNNGC | 2 cut(s) | 94, 212 |
| CaiI | CAGNNNCTG | 1 cut(s) | 89 |
| Cfr10I | RCCGGY | 2 cut(s) | 439, 791 |
| Cfr13I | GGNCC | 5 cut(s) | 47, 68, 772, 783, 794 |
| CseI | GACGC | 3 cut(s) | 100, 345, 1133 |
| Csp6I | GTAC | 5 cut(s) | 262, 394, 502, 973, 1120 |
| CviAII | CATG | 4 cut(s) | 107, 280, 458, 635 |
| CviQI | GTAC | 5 cut(s) | 262, 394, 502, 973, 1120 |
| DdeI | CTNAG | 1 cut(s) | 577 |
| DpnI | GATC | 3 cut(s) | 592, 725, 765 |
| DpnII | GATC | 3 cut(s) | 590, 723, 763 |
| DraI | TTTAAA | 1 cut(s) | 475 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 75 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 75 |
| EaeI | YGGCCR | 2 cut(s) | 417, 813 |
| Ecl136II | GAGCTC | 1 cut(s) | 805 |
| Eco130I | CCWWGG | 2 cut(s) | 106, 644 |
| Eco147I | AGGCCT | 1 cut(s) | 1104 |
| Eco24I | GRGCYC | 1 cut(s) | 807 |
| Eco31I | GGTCTC | 1 cut(s) | 83 |
| Eco47I | GGWCC | 1 cut(s) | 68 |
| Eco53kI | GAGCTC | 1 cut(s) | 805 |
| Eco57I | CTGAAG | 1 cut(s) | 255 |
| EcoICRI | GAGCTC | 1 cut(s) | 805 |
| EcoO109I | RGGNCCY | 1 cut(s) | 47 |
| EcoRI | GAATTC | 1 cut(s) | 556 |
| EcoRII | CCWGG | 1 cut(s) | 324 |
| EcoT14I | CCWWGG | 2 cut(s) | 106, 644 |
| EcoT38I | GRGCYC | 1 cut(s) | 807 |
| ErhI | CCWWGG | 2 cut(s) | 106, 644 |
| FaeI | CATG | 4 cut(s) | 110, 283, 461, 638 |
| FaqI | GGGAC | 1 cut(s) | 98 |
| FatI | CATG | 4 cut(s) | 106, 279, 457, 634 |
| FauNDI | CATATG | 1 cut(s) | 612 |
| Fnu4HI | GCNGC | 4 cut(s) | 90, 342, 782, 813 |
| FokI | GGATG | 1 cut(s) | 1199 |
| FriOI | GRGCYC | 1 cut(s) | 807 |
| Fsp4HI | GCNGC | 4 cut(s) | 90, 342, 782, 813 |
| FspBI | CTAG | 2 cut(s) | 741, 1050 |
| GluI | GCNGC | 4 cut(s) | 90, 342, 782, 813 |
| GsuI | CTGGAG | 1 cut(s) | 388 |
| HaeIII | GGCC | 8 cut(s) | 49, 329, 419, 774, 784, 795, 815, 1104 |
| HapII | CCGG | 9 cut(s) | 403, 440, 704, 778, 792, 819, 830, 867, 1110 |
| HgaI | GACGC | 3 cut(s) | 100, 345, 1133 |
| Hin1I | GRCGYC | 3 cut(s) | 111, 356, 1125 |
| Hin1II | CATG | 4 cut(s) | 110, 283, 461, 638 |
| HpaII | CCGG | 9 cut(s) | 403, 440, 704, 778, 792, 819, 830, 867, 1110 |
| HphI | GGTGA | 2 cut(s) | 454, 1009 |
| Hpy166II | GTNNAC | 1 cut(s) | 718 |
| Hpy188I | TCNGA | 6 cut(s) | 378, 483, 524, 675, 845, 1094 |
| Hpy188III | TCNNGA | 5 cut(s) | 128, 367, 449, 836, 1110 |
| Hpy8I | GTNNAC | 1 cut(s) | 718 |
| Hpy99I | CGWCG | 2 cut(s) | 361, 1127 |
| HpyAV | CCTTC | 3 cut(s) | 38, 889, 1019 |
| HpyCH4III | ACNGT | 3 cut(s) | 204, 631, 1084 |
| HpyCH4V | TGCA | 7 cut(s) | 12, 65, 144, 588, 602, 634, 965 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 89, 994, 1039, 1124 |
| HpyF3I | CTNAG | 1 cut(s) | 577 |
| Hsp92I | GRCGYC | 3 cut(s) | 111, 356, 1125 |
| Hsp92II | CATG | 4 cut(s) | 110, 283, 461, 638 |
| Kpn2I | TCCGGA | 1 cut(s) | 1109 |
| Kzo9I | GATC | 3 cut(s) | 590, 723, 763 |
| LmnI | GCTCC | 2 cut(s) | 845, 914 |
| Lsp1109I | GCAGC | 2 cut(s) | 76, 328 |
| MaeI | CTAG | 2 cut(s) | 741, 1050 |
| MaeIII | GTNAC | 1 cut(s) | 852 |
| MalI | GATC | 3 cut(s) | 592, 725, 765 |
| MboI | GATC | 3 cut(s) | 590, 723, 763 |
| MboII | GAAGA | 5 cut(s) | 185, 248, 479, 1107, 1174 |
| MflI | RGATCY | 1 cut(s) | 723 |
| MhlI | GDGCHC | 1 cut(s) | 807 |
| MlsI | TGGCCA | 1 cut(s) | 419 |
| MluCI | AATT | 3 cut(s) | 28, 556, 920 |
| MluNI | TGGCCA | 1 cut(s) | 419 |
| MlyI | GAGTC | 3 cut(s) | 174, 293, 742 |
| MmeI | TCCRAC | 4 cut(s) | 126, 461, 823, 1037 |
| MnlI | CCTC | 6 cut(s) | 309, 354, 363, 618, 785, 1115 |
| Mox20I | TGGCCA | 1 cut(s) | 419 |
| MroI | TCCGGA | 1 cut(s) | 1109 |
| MscI | TGGCCA | 1 cut(s) | 419 |
| MseI | TTAA | 3 cut(s) | 474, 924, 1131 |
| Msp20I | TGGCCA | 1 cut(s) | 419 |
| MspI | CCGG | 9 cut(s) | 403, 440, 704, 778, 792, 819, 830, 867, 1110 |
| MspR9I | CCNGG | 3 cut(s) | 326, 403, 830 |
| Mva1269I | GAATGC | 1 cut(s) | 1035 |
| MvaI | CCWGG | 1 cut(s) | 326 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 89, 994, 1039, 1124 |
| NciI | CCSGG | 2 cut(s) | 403, 830 |
| NcoI | CCATGG | 1 cut(s) | 106 |
| NdeI | CATATG | 1 cut(s) | 612 |
| NdeII | GATC | 3 cut(s) | 590, 723, 763 |
| NlaIII | CATG | 4 cut(s) | 110, 283, 461, 638 |
| NlaIV | GGNNCC | 3 cut(s) | 230, 725, 916 |
| NmeAIII | GCCGAG | 3 cut(s) | 339, 460, 732 |
| NmuCI | GTSAC | 1 cut(s) | 852 |
| NspI | RCATGY | 1 cut(s) | 638 |
| PceI | AGGCCT | 1 cut(s) | 1104 |
| PctI | GAATGC | 1 cut(s) | 1035 |
| PfeI | GAWTC | 7 cut(s) | 124, 350, 445, 484, 700, 950, 1202 |
| Pfl23II | CGTACG | 1 cut(s) | 1119 |
| PkrI | GCNGC | 4 cut(s) | 91, 343, 783, 814 |
| PleI | GAGTC | 3 cut(s) | 174, 292, 742 |
| PpsI | GAGTC | 3 cut(s) | 174, 292, 742 |
| Psp124BI | GAGCTC | 1 cut(s) | 807 |
| Psp6I | CCWGG | 1 cut(s) | 324 |
| PspGI | CCWGG | 1 cut(s) | 324 |
| PspLI | CGTACG | 1 cut(s) | 1119 |
| PspN4I | GGNNCC | 3 cut(s) | 230, 725, 916 |
| PspPI | GGNCC | 5 cut(s) | 47, 68, 772, 783, 794 |
| PstNI | CAGNNNCTG | 1 cut(s) | 89 |
| PsuI | RGATCY | 1 cut(s) | 723 |
| RsaI | GTAC | 5 cut(s) | 263, 395, 503, 974, 1121 |
| RsaNI | GTAC | 5 cut(s) | 262, 394, 502, 973, 1120 |
| SacI | GAGCTC | 1 cut(s) | 807 |
| SaqAI | TTAA | 3 cut(s) | 474, 924, 1131 |
| SatI | GCNGC | 4 cut(s) | 90, 342, 782, 813 |
| Sau3AI | GATC | 3 cut(s) | 590, 723, 763 |
| Sau96I | GGNCC | 5 cut(s) | 47, 68, 772, 783, 794 |
| SchI | GAGTC | 3 cut(s) | 174, 293, 742 |
| ScrFI | CCNGG | 3 cut(s) | 326, 403, 830 |
| SduI | GDGCHC | 1 cut(s) | 807 |
| SinI | GGWCC | 1 cut(s) | 68 |
| SmlI | CTYRAG | 2 cut(s) | 128, 998 |
| SmoI | CTYRAG | 2 cut(s) | 128, 998 |
| Sse9I | AATT | 3 cut(s) | 28, 556, 920 |
| SseBI | AGGCCT | 1 cut(s) | 1104 |
| SsiI | CCGC | 2 cut(s) | 781, 812 |
| SspMI | CTAG | 2 cut(s) | 741, 1050 |
| SstI | GAGCTC | 1 cut(s) | 807 |
| StuI | AGGCCT | 1 cut(s) | 1104 |
| StyD4I | CCNGG | 3 cut(s) | 324, 401, 828 |
| StyI | CCWWGG | 2 cut(s) | 106, 644 |
| TaaI | ACNGT | 3 cut(s) | 204, 631, 1084 |
| TaqI | TCGA | 4 cut(s) | 359, 390, 801, 837 |
| TasI | AATT | 3 cut(s) | 28, 556, 920 |
| TatI | WGTACW | 2 cut(s) | 393, 501 |
| TauI | GCSGC | 2 cut(s) | 784, 815 |
| TfiI | GAWTC | 7 cut(s) | 124, 350, 445, 484, 700, 950, 1202 |
| Tru1I | TTAA | 3 cut(s) | 474, 924, 1131 |
| Tru9I | TTAA | 3 cut(s) | 474, 924, 1131 |
| TscAI | CASTG | 1 cut(s) | 634 |
| TseFI | GTSAC | 1 cut(s) | 852 |
| TseI | GCWGC | 2 cut(s) | 89, 341 |
| Tsp45I | GTSAC | 1 cut(s) | 852 |
| TspDTI | ATGAA | 4 cut(s) | 179, 259, 446, 479 |
| TspGWI | ACGGA | 1 cut(s) | 776 |
| TspRI | CASTG | 1 cut(s) | 634 |
| VpaK11BI | GGWCC | 1 cut(s) | 68 |
| XapI | RAATTY | 2 cut(s) | 556, 920 |
| XceI | RCATGY | 1 cut(s) | 638 |
| XspI | CTAG | 2 cut(s) | 741, 1050 |