Rroxscaffold_3G00263180

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
Physical Location & Seq
Forward (+)
57117484 .. 57119727
2244 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00263180.1

Sequence Viewer

Length: 1173 bp
ATGCTCGAGCCGAGTGAAACCTTGTCAGTAGTACTGCTTCTAGCCATTACCCTCATCTTCATATACAAATGGTTCTCCACTAGTACAAAAGACTCACTACCTTCTCCACCAAAACTCCCTATCCTCGGAAACCTTCACCAACTAGGGTTACGCCCTCATCGCTCACTTCGAGCCTTAGCTCAGATCCATGGCCCCTTCATGCTCCTCCACTTTGGAAGCGTCCCCTTCCTTATTGTCTCCTCGGCTGAGGGAGCCCGCGAGATCATGAAAACCCATGACCTCACTTTCTCCAACAGACCCAAGATGGTCATCTTTGAGAAGCTGCTCTACAATTTCAGAGACATAGCGTCGGCGCCTTATGGATGGTATTGGAGACAGATGAAGAGTATATGTGTTTTGAATCTTCTGAGCAACAAAAGGGTTCGCTCTTTTCGCTCTGTTAGAGAAGAGGAAACAAAATCGATGATCGACAAGATAAAGGAATCATCATCAACATCATCGGTTTTAAACTTAAGTGAAATGTTTGCTACGCTGACTAATGATGTCATCAGTAGAGTTGCTCTGGGTAGGAAGTATAATGGTACTGGTGGGGAAGTCCTGGAATGGGCAATGAGTGAGCTTTTAAGGCATCCGATGGTCATGAACAAACTGCAGAAAGAGATTCGAGGAATAGTCAGAGACAAGAAAGACATGACGGAGGATGATTTGACCGGAATGCACTACTTGAAGGCAGTGATCAAGGAGACTCTTCGCTTGCACCCTCCAGTTCCGTTGCTAGTGCCCAGGTTATCAACCCACGAAGTGAAAATAAATGGTTACAGCATTAAAGCCAACACACGAGTTCTAGTGAATGCATGGCACATTGGAAGAGACCCCGAGTCATACAGCAATCCAGAGGAGTTTGAGCCAGAAAGGTTCTTGATCCACAACGATATAGATTACAAAGGAAATGACTTCCAACTTATTCCATTTGGAGCTGGTAGAAGGATTTGCCCAGGTATTCAATTTGCCACTGCTGTTAATGAGATTGCTTTGGCAAACATATTGCACAAGTTCAATTGGAAATTGCCTAATGGAGCAAAAGGCGAAGATTTGGACATGACGGAATCTACTGGTATAACCATACATAGGAAATATCCTCTTAAAGTCGTTGCTGTTCCATATTTTCATTGA

Protein Analysis

390

Amino Acids

44.48

Weight (kDa)

9.41

Isoelectric Point (pI)

44.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 34 - 193 4.6e-23 Cytochrome P450
p450 PF00067 199 - 376 8.4e-60 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000061)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G48270 AT3G48280 AT3G48290 AT3G48290 AT3G48300 AT3G48300 AT3G48310 AT3G48320 AT4G20235 AT4G20235
fragaria_vesca FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g36190 FvH4_3g14160 FvH4_3g14210 FvH4_3g14260 FvH4_3g14260 FvH4_3g21100 FvH4_3g21380 FvH4_4g24460 FvH4_4g24500 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06572 FvH4_5g06573 FvH4_5g06574 FvH4_5g06575 FvH4_5g06576 FvH4_5g06577 FvH4_5g06577 FvH4_5g07540 FvH4_5g07550 FvH4_5g07560 FvH4_5g07570 FvH4_5g29491 FvH4_5g29492 FvH4_6g23870 FvH4_6g23880 FvH4_6g26870 FvH4_7g11861 FvH4_7g11862 FvH4_7g13050 FvH4_7g13060 FvH4_7g13080 FvH4_7g13080 FvH4_7g22630 FvH4_7g22650 FvH4_7g22651 FvH4_7g23020
malus_domestica MD03G1207400.v1.1 MD03G1214800.v1.1 MD03G1218500.v1.1 MD06G1163100.v1.1 MD06G1163300.v1.1 MD06G1163400.v1.1 MD06G1163500.v1.1 MD06G1163600.v1.1 MD06G1163800.v1.1 MD06G1164000.v1.1 MD06G1164100.v1.1 MD06G1224400.v1.1 MD08G1222800.v1.1 MD08G1222900.v1.1 MD08G1223100.v1.1 MD11G1091500.v1.1 MD11G1091800.v1.1 MD14G1163200.v1.1 MD14G1169000.v1.1 MD15G1207200.v1.1 MD15G1207300.v1.1 MD17G1259400.v1.1
prunus_persica Prupe.4G198100_v2.0.a1 Prupe.4G199100_v2.0.a1 Prupe.4G199400_v2.0.a1 Prupe.4G199800_v2.0.a1 Prupe.4G225200_v2.0.a1 Prupe.4G239100_v2.0.a1 Prupe.5G156600_v2.0.a1 Prupe.5G163500_v2.0.a1 Prupe.7G209500_v2.0.a1 Prupe.I003400_v2.0.a1
pyrus_communis pycom03g16340 pycom06g14600 pycom06g14610 pycom06g14620 pycom06g14630 pycom06g14640 pycom06g14670 pycom06g14690 pycom08g19390 pycom08g19400 pycom08g19410 pycom11g07600 pycom11g07610 pycom11g07620 pycom11g07660 pycom14g13580 pycom14g14080 pycom14g14100 pycom14g14110 pycom15g18380 pycom17g26080
rosa_chinensis RchiOBHm_Chr1g0339441 RchiOBHm_Chr1g0339451 RchiOBHm_Chr1g0352191 RchiOBHm_Chr1g0368221 RchiOBHm_Chr2g0129531 RchiOBHm_Chr2g0129541 RchiOBHm_Chr3g0477631 RchiOBHm_Chr3g0482551 RchiOBHm_Chr3g0482561 RchiOBHm_Chr3g0482571 RchiOBHm_Chr4g0411601 RchiOBHm_Chr4g0422181 RchiOBHm_Chr5g0036661 RchiOBHm_Chr5g0036731 RchiOBHm_Chr6g0274021 RchiOBHm_Chr7g0190921 RchiOBHm_Chr7g0190931 RchiOBHm_Chr7g0190941 RchiOBHm_Chr7g0190951 RchiOBHm_Chr7g0190961 RchiOBHm_Chr7g0190971 RchiOBHm_Chr7g0191001 RchiOBHm_Chr7g0191011 RchiOBHm_Chr7g0191021 RchiOBHm_Chr7g0192181 RchiOBHm_Chr7g0192191 RchiOBHm_Chr7g0192201 RchiOBHm_Chr7g0192221 RchiOBHm_Chr7g0192231 RchiOBHm_Chr7g0192281 RchiOBHm_Chr7g0197311
rosa_laevigata RLG00000003942 RLG00000004345 RLG00000004379 RLG00000004383 RLG00000004384 RLG00000004385 RLG00000004387 RLG00000004388 RLG00000004389 RLG00000004480 RLG00000004481 RLG00000004482 RLG00000004483 RLG00000004485 RLG00000008342 RLG00000008401 RLG00000013583 RLG00000017044 RLG00000027229 RLG00000028349 RLG00000028350 RLG00000028353 RLG00000028820 RLG00000033707 RLG00000033710
rosa_multiflora Rmu_co8020340.1_g000001 Rmu_co8096640.1_g000001 Rmu_co8214930.1_g000001 Rmu_co8223272.1_g000001 Rmu_co8282535.1_g000001 Rmu_co8343567.1_g000001 Rmu_co8404191.1_g000001 Rmu_co8455157.1_g000001 Rmu_sc0000062.1_g000028 Rmu_sc0000082.1_g000091 Rmu_sc0000509.1_g000017 Rmu_sc0000775.1_g000001 Rmu_sc0000999.1_g000034 Rmu_sc0001559.1_g000004 Rmu_sc0001559.1_g000009 Rmu_sc0002164.1_g000001 Rmu_sc0002164.1_g000005 Rmu_sc0002164.1_g000007 Rmu_sc0002164.1_g000008 Rmu_sc0002164.1_g000009 Rmu_sc0002164.1_g000019 Rmu_sc0002247.1_g000009 Rmu_sc0002373.1_g000002 Rmu_sc0002373.1_g000003 Rmu_sc0002944.1_g000059 Rmu_sc0003930.1_g000004 Rmu_sc0004958.1_g000001 Rmu_sc0005197.1_g000014 Rmu_sc0005898.1_g000008 Rmu_sc0005898.1_g000009 Rmu_sc0005898.1_g000015 Rmu_sc0006059.1_g000004 Rmu_sc0006059.1_g000010 Rmu_sc0006903.1_g000007 Rmu_sc0006903.1_g000008 Rmu_sc0006968.1_g000001 Rmu_sc0011009.1_g000009 Rmu_sc0022852.1_g000002 Rmu_sc0033854.1_g000001 Rmu_ssc0000421.1_g000057 Rmu_ssc0000421.1_g000067 Rmu_ssc0000421.1_g000069 Rmu_ssc0000421.1_g000072 Rmu_ssc0000421.1_g000081 Rmu_ssc0000421.1_g000086
rosa_roxburghii Rroxscaffold_158G00443680 Rroxscaffold_158G00443710 Rroxscaffold_158G00443720 Rroxscaffold_158G00443740 Rroxscaffold_1G00034950 Rroxscaffold_1G00044240 Rroxscaffold_1G00044270 Rroxscaffold_3G00241380 Rroxscaffold_3G00247000 Rroxscaffold_3G00263120 Rroxscaffold_3G00263150 Rroxscaffold_3G00263160 Rroxscaffold_3G00263170 Rroxscaffold_3G00263180 Rroxscaffold_3G00263190 Rroxscaffold_3G00263210 Rroxscaffold_3G00263230 Rroxscaffold_3G00263260 Rroxscaffold_3G00264110 Rroxscaffold_3G00264130 Rroxscaffold_3G00264160 Rroxscaffold_3G00264180 Rroxscaffold_3G00264200 Rroxscaffold_4G00288750 Rroxscaffold_4G00303110 Rroxscaffold_4G00303120 Rroxscaffold_4G00322280 Rroxscaffold_5G00356200 Rroxscaffold_6G00399150 Rroxscaffold_6G00399290 Rroxscaffold_7G00194770
rosa_rugosa Rorug01G0225300 Rorug01G0225400 Rorug01G0225800 Rorug01G0226000 Rorug01G0339400 Rorug01G0451500 Rorug03G0196900 Rorug03G0294900 Rorug04G0107500 Rorug04G0107600 Rorug04G0129700 Rorug04G0178000 Rorug05G0144900.1 Rorug05G0145000 Rorug05G0228000 Rorug05G0228600 Rorug06G0078300 Rorug06G0508000 Rorug06G0508100 Rorug06G0508100 Rorug06G0508400 Rorug06G0513400 Rorug07G0000100 Rorug07G0000200 Rorug07G0000300 Rorug07G0000500 Rorug07G0000800
rosa_samantha Rh1BG060400 Rh1BG210300 Rh1BG210700 Rh1BG210800 Rh1BG309800 Rh1CG223800 Rh1CG224200 Rh1CG325200 Rh1DG237000 Rh1DG237400 Rh1DG341600 Rh2DG365700 Rh3AG212500 Rh3AG248400 Rh3CG239800 Rh3DG239300 Rh4AG169300 Rh4BG166200 Rh4BG240500 Rh4BG240600 Rh4DG163600 Rh5AG249600 Rh5AG249900 Rh5AG250000 Rh5CG283100 Rh5CG283200 Rh5CG283400 Rh5DG259200 Rh5DG259800 Rh6BG197700 Rh6CG197800 Rh6DG189400 Rh7AG114900 Rh7AG115000 Rh7AG115200 Rh7AG115300 Rh7AG115400 Rh7AG115500 Rh7AG123900 Rh7AG124100 Rh7AG124300 Rh7BG117200 Rh7BG117400 Rh7BG118400 Rh7BG125400 Rh7BG125600 Rh7BG125700 Rh7BG125800 Rh7BG125900 Rh7BG126000 Rh7BG126400 Rh7BG126600 Rh7BG126700 Rh7BG166200 Rh7DG118600 Rh7DG118700 Rh7DG118900 Rh7DG119000 Rh7DG119100 Rh7DG127400 Rh7DG127600 Rh7DG127700 Rh7DG127900 Rh7DG128200
rosa_wichuraiana Rw1G013270 Rw1G020790 Rw2G027890 Rw2G028040 Rw3G019240 Rw4G014070 Rw4G020540 Rw5G021320 Rw5G022970 Rw6G016920 Rw7G010020 Rw7G010040 Rw7G010580 Rw7G010590 Rw7G010600 Rw7G010610 Rw7G010620 Rw7G010630 Rw7G010640 Rw7G010690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 352
AccII CGCG 1 cut(s) 258
AciI CCGC 1 cut(s) 256
AclWI GGATC 2 cut(s) 178, 916
AcyI GRCGYC 1 cut(s) 353
AdeI CACNNNGTG 1 cut(s) 802
AfaI GTAC 3 cut(s) 33, 85, 583
AfiI CCNNNNNNNGG 3 cut(s) 125, 604, 1128
AflII CTTAAG 1 cut(s) 511
AgsI TTSAA 4 cut(s) 400, 727, 1004, 1057
AhdI GACNNNNNGTC 2 cut(s) 346, 877
AhlI ACTAGT 1 cut(s) 80
AjnI CCWGG 3 cut(s) 597, 782, 994
AluBI AGCT 4 cut(s) 179, 322, 619, 977
AluI AGCT 4 cut(s) 179, 322, 619, 977
Alw26I GTCTC 6 cut(s) 241, 333, 367, 672, 737, 864
AlwI GGATC 2 cut(s) 178, 916
Ama87I CYCGRG 2 cut(s) 5, 875
AoxI GGCC 1 cut(s) 190
ApeKI GCWGC 1 cut(s) 322
AspLEI GCGC 1 cut(s) 355
AspS9I GGNCC 1 cut(s) 191
AsuHPI GGTGA 1 cut(s) 128
AvaI CYCGRG 2 cut(s) 5, 875
BaeGI GKGCMC 1 cut(s) 783
BanI GGYRCC 1 cut(s) 352
BanII GRGCYC 1 cut(s) 256
BarI GAAGNNNNNNTAC 4 cut(s) 21, 53, 311, 343
BauI CACGAG 1 cut(s) 837
BbvCI CCTCAGC 1 cut(s) 246
BbvI GCAGC 1 cut(s) 309
BccI CCATC 3 cut(s) 298, 357, 628
BciT130I CCWGG 3 cut(s) 599, 784, 996
BclI TGATCA 1 cut(s) 735
BcoDI GTCTC 6 cut(s) 241, 333, 367, 672, 737, 864
BcuI ACTAGT 1 cut(s) 80
BfaI CTAG 5 cut(s) 41, 81, 143, 776, 845
BfmI CTRYAG 1 cut(s) 650
BfoI RGCGCY 1 cut(s) 356
BfrI CTTAAG 1 cut(s) 511
BisI GCNGC 1 cut(s) 323
BlsI GCNGC 1 cut(s) 324
BmcAI AGTACT 1 cut(s) 33
Bme1390I CCNGG 3 cut(s) 599, 784, 996
BmeRI GACNNNNNGTC 2 cut(s) 346, 877
BmeT110I CYCGRG 2 cut(s) 5, 875
BmgT120I GGNCC 1 cut(s) 191
BmiI GGNNCC 3 cut(s) 193, 253, 354
BmrFI CCNGG 3 cut(s) 599, 784, 996
BmsI GCATC 1 cut(s) 637
BpmI CTGGAG 1 cut(s) 747
Bpu10I CCTNAGC 2 cut(s) 175, 246
Bsa29I ATCGAT 1 cut(s) 461
BsaBI GATNNNNATC 1 cut(s) 308
BsaHI GRCGYC 1 cut(s) 353
BsaI GGTCTC 1 cut(s) 864
BsaJI CCNNGG 5 cut(s) 124, 187, 240, 782, 994
BsaWI WCCGGW 1 cut(s) 710
BsaXI ACNNNNNCTCC 2 cut(s) 99, 129
Bsc4I CCNNNNNNNGG 3 cut(s) 125, 604, 1128
Bse1I ACTGG 3 cut(s) 589, 764, 1117
Bse3DI GCAATG 1 cut(s) 615
Bse8I GATNNNNATC 1 cut(s) 308
BseBI CCWGG 3 cut(s) 599, 784, 996
BseCI ATCGAT 1 cut(s) 461
BseDI CCNNGG 5 cut(s) 124, 187, 240, 782, 994
BseGI GGATG 3 cut(s) 368, 628, 706
BseJI GATNNNNATC 1 cut(s) 308
BseLI CCNNNNNNNGG 3 cut(s) 125, 604, 1128
BseMI GCAATG 1 cut(s) 615
BseMII CTCAG 3 cut(s) 194, 237, 398
BseNI ACTGG 3 cut(s) 589, 764, 1117
BseRI GAGGAG 3 cut(s) 194, 229, 911
BseSI GKGCMC 1 cut(s) 783
BseXI GCAGC 1 cut(s) 309
Bsh1236I CGCG 1 cut(s) 258
BshFI GGCC 1 cut(s) 192
BshNI GGYRCC 1 cut(s) 352
BshVI ATCGAT 1 cut(s) 461
BsiHKCI CYCGRG 2 cut(s) 5, 875
BsiSI CCGG 1 cut(s) 711
BslFI GGGAC 1 cut(s) 206
BslI CCNNNNNNNGG 3 cut(s) 125, 604, 1128
BsmAI GTCTC 6 cut(s) 241, 333, 367, 672, 737, 864
BsmFI GGGAC 1 cut(s) 206
BsmI GAATGC 2 cut(s) 720, 856
BsnI GGCC 1 cut(s) 192
Bso31I GGTCTC 1 cut(s) 864
BsoBI CYCGRG 2 cut(s) 5, 875
Bsp1286I GDGCHC 2 cut(s) 256, 783
Bsp143I GATC 5 cut(s) 183, 261, 465, 735, 921
Bsp19I CCATGG 1 cut(s) 187
BspACI CCGC 1 cut(s) 256
BspANI GGCC 1 cut(s) 192
BspCNI CTCAG 3 cut(s) 193, 238, 399
BspDI ATCGAT 1 cut(s) 461
BspFNI CGCG 1 cut(s) 258
BspHI TCATGA 2 cut(s) 264, 639
BspLI GGNNCC 3 cut(s) 193, 253, 354
BspMAI CTGCAG 1 cut(s) 654
BspPI GGATC 2 cut(s) 178, 916
BspT107I GGYRCC 1 cut(s) 352
BspTI CTTAAG 1 cut(s) 511
BspTNI GGTCTC 1 cut(s) 864
BsrDI GCAATG 1 cut(s) 615
BsrI ACTGG 3 cut(s) 589, 764, 1117
BssECI CCNNGG 5 cut(s) 124, 187, 240, 782, 994
BssMI GATC 5 cut(s) 183, 261, 465, 735, 921
BssNI GRCGYC 1 cut(s) 353
BssSI CACGAG 1 cut(s) 837
BssT1I CCWWGG 1 cut(s) 187
Bst2BI CACGAG 1 cut(s) 837
Bst2UI CCWGG 3 cut(s) 599, 784, 996
Bst6I CTCTTC 4 cut(s) 377, 441, 753, 862
BstACI GRCGYC 1 cut(s) 353
BstAFI CTTAAG 1 cut(s) 511
BstC8I GCNNGC 2 cut(s) 256, 755
BstDEI CTNAG 4 cut(s) 175, 180, 246, 407
BstDSI CCRYGG 1 cut(s) 187
BstF5I GGATG 3 cut(s) 368, 628, 706
BstFNI CGCG 1 cut(s) 258
BstH2I RGCGCY 1 cut(s) 356
BstHHI GCGC 1 cut(s) 355
BstKTI GATC 5 cut(s) 186, 264, 468, 738, 924
BstMAI GTCTC 6 cut(s) 241, 333, 367, 672, 737, 864
BstMBI GATC 5 cut(s) 183, 261, 465, 735, 921
BstMWI GCNNNNNNNGC 4 cut(s) 159, 251, 432, 625
BstNI CCWGG 3 cut(s) 599, 784, 996
BstSCI CCNGG 3 cut(s) 597, 782, 994
BstSFI CTRYAG 1 cut(s) 650
BstSLI GKGCMC 1 cut(s) 783
BstUI CGCG 1 cut(s) 258
BstV1I GCAGC 1 cut(s) 309
BstX2I RGATCY 1 cut(s) 183
BstYI RGATCY 1 cut(s) 183
Bsu15I ATCGAT 1 cut(s) 461
BsuRI GGCC 1 cut(s) 192
BsuTUI ATCGAT 1 cut(s) 461
BtgI CCRYGG 1 cut(s) 187
BtgZI GCGATG 1 cut(s) 143
BtsCI GGATG 3 cut(s) 368, 628, 706
BtsI GCAGTG 2 cut(s) 738, 1011
BtsIMutI CAGTG 2 cut(s) 738, 1011
Cac8I GCNNGC 2 cut(s) 256, 755
CciI TCATGA 2 cut(s) 264, 639
CfoI GCGC 1 cut(s) 355
Cfr13I GGNCC 1 cut(s) 191
ClaI ATCGAT 1 cut(s) 461
CseI GACGC 2 cut(s) 208, 336
Csp6I GTAC 3 cut(s) 32, 84, 582
CviAII CATG 8 cut(s) 188, 199, 265, 275, 640, 691, 855, 1099
CviQI GTAC 3 cut(s) 32, 84, 582
DdeI CTNAG 4 cut(s) 175, 180, 246, 407
DinI GGCGCC 1 cut(s) 354
DpnI GATC 5 cut(s) 185, 263, 467, 737, 923
DpnII GATC 5 cut(s) 183, 261, 465, 735, 921
DraI TTTAAA 1 cut(s) 507
DraIII CACNNNGTG 1 cut(s) 802
DriI GACNNNNNGTC 2 cut(s) 346, 877
Eam1104I CTCTTC 4 cut(s) 377, 441, 753, 862
Eam1105I GACNNNNNGTC 2 cut(s) 346, 877
EarI CTCTTC 4 cut(s) 377, 441, 753, 862
Eco130I CCWWGG 1 cut(s) 187
Eco24I GRGCYC 1 cut(s) 256
Eco31I GGTCTC 1 cut(s) 864
Eco88I CYCGRG 2 cut(s) 5, 875
EcoRII CCWGG 3 cut(s) 597, 782, 994
EcoT14I CCWWGG 1 cut(s) 187
EcoT22I ATGCAT 1 cut(s) 856
EcoT38I GRGCYC 1 cut(s) 256
EgeI GGCGCC 1 cut(s) 354
EheI GGCGCC 1 cut(s) 354
ErhI CCWWGG 1 cut(s) 187
FaeI CATG 8 cut(s) 191, 202, 268, 278, 643, 694, 858, 1102
FaqI GGGAC 1 cut(s) 206
FatI CATG 8 cut(s) 187, 198, 264, 274, 639, 690, 854, 1098
FauI CCCGC 1 cut(s) 263
FbaI TGATCA 1 cut(s) 735
Fnu4HI GCNGC 1 cut(s) 323
FokI GGATG 3 cut(s) 375, 615, 713
FriOI GRGCYC 1 cut(s) 256
Fsp4HI GCNGC 1 cut(s) 323
FspBI CTAG 5 cut(s) 41, 81, 143, 776, 845
GlaI GCGC 1 cut(s) 354
GluI GCNGC 1 cut(s) 323
GsuI CTGGAG 1 cut(s) 747
HaeII RGCGCY 1 cut(s) 356
HaeIII GGCC 1 cut(s) 192
HapII CCGG 1 cut(s) 711
HgaI GACGC 2 cut(s) 208, 336
HhaI GCGC 1 cut(s) 355
Hin1I GRCGYC 1 cut(s) 353
Hin1II CATG 8 cut(s) 191, 202, 268, 278, 643, 694, 858, 1102
Hin6I GCGC 1 cut(s) 353
HinP1I GCGC 1 cut(s) 353
HinfI GANTC 7 cut(s) 92, 400, 482, 661, 745, 878, 1106
HpaII CCGG 1 cut(s) 711
HphI GGTGA 1 cut(s) 128
Hpy188I TCNGA 6 cut(s) 128, 183, 338, 408, 633, 677
Hpy188III TCNNGA 4 cut(s) 265, 640, 893, 919
Hpy99I CGWCG 1 cut(s) 352
HpyAV CCTTC 6 cut(s) 111, 143, 205, 235, 721, 978
HpyCH4V TGCA 5 cut(s) 652, 718, 757, 854, 1048
HpyF10VI GCNNNNNNNGC 4 cut(s) 159, 251, 432, 625
HpyF3I CTNAG 4 cut(s) 175, 180, 246, 407
Hsp92I GRCGYC 1 cut(s) 353
Hsp92II CATG 8 cut(s) 191, 202, 268, 278, 643, 694, 858, 1102
HspAI GCGC 1 cut(s) 353
KasI GGCGCC 1 cut(s) 352
Ksp22I TGATCA 1 cut(s) 735
Kzo9I GATC 5 cut(s) 183, 261, 465, 735, 921
LmnI GCTCC 4 cut(s) 207, 251, 974, 1076
Lsp1109I GCAGC 1 cut(s) 309
LweI GCATC 1 cut(s) 637
MaeI CTAG 5 cut(s) 41, 81, 143, 776, 845
MaeIII GTNAC 2 cut(s) 147, 815
MalI GATC 5 cut(s) 185, 263, 467, 737, 923
MboI GATC 5 cut(s) 183, 261, 465, 735, 921
MboII GAAGA 7 cut(s) 49, 394, 395, 458, 740, 879, 1100
MfeI CAATTG 1 cut(s) 1057
MflI RGATCY 1 cut(s) 183
MhlI GDGCHC 2 cut(s) 256, 783
MluCI AATT 4 cut(s) 331, 1004, 1057, 1064
Mly113I GGCGCC 1 cut(s) 353
MlyI GAGTC 3 cut(s) 86, 739, 887
MmeI TCCRAC 2 cut(s) 315, 982
Mph1103I ATGCAT 1 cut(s) 856
MseI TTAA 6 cut(s) 506, 512, 623, 825, 1020, 1143
MspCI CTTAAG 1 cut(s) 511
MspI CCGG 1 cut(s) 711
MspR9I CCNGG 3 cut(s) 599, 784, 996
MunI CAATTG 1 cut(s) 1057
Mva1269I GAATGC 2 cut(s) 720, 856
MvaI CCWGG 3 cut(s) 599, 784, 996
MvnI CGCG 1 cut(s) 258
MwoI GCNNNNNNNGC 4 cut(s) 159, 251, 432, 625
NarI GGCGCC 1 cut(s) 353
NcoI CCATGG 1 cut(s) 187
NdeII GATC 5 cut(s) 183, 261, 465, 735, 921
NlaIII CATG 8 cut(s) 191, 202, 268, 278, 643, 694, 858, 1102
NlaIV GGNNCC 3 cut(s) 193, 253, 354
NmeAIII GCCGAG 2 cut(s) 36, 221
NsiI ATGCAT 1 cut(s) 856
PaeR7I CTCGAG 1 cut(s) 5
PagI TCATGA 2 cut(s) 264, 639
PcsI WCGNNNNNNNCGW 1 cut(s) 166
PctI GAATGC 2 cut(s) 720, 856
PfeI GAWTC 4 cut(s) 400, 482, 661, 1106
PfoI TCCNGGA 1 cut(s) 597
PkrI GCNGC 1 cut(s) 324
PleI GAGTC 3 cut(s) 86, 739, 886
PluTI GGCGCC 1 cut(s) 356
PpsI GAGTC 3 cut(s) 86, 739, 886
Psp6I CCWGG 3 cut(s) 597, 782, 994
PspGI CCWGG 3 cut(s) 597, 782, 994
PspN4I GGNNCC 3 cut(s) 193, 253, 354
PspPI GGNCC 1 cut(s) 191
PspXI VCTCGAGB 1 cut(s) 5
PstI CTGCAG 1 cut(s) 654
PsuI RGATCY 1 cut(s) 183
RsaI GTAC 3 cut(s) 33, 85, 583
RsaNI GTAC 3 cut(s) 32, 84, 582
SaqAI TTAA 6 cut(s) 506, 512, 623, 825, 1020, 1143
SatI GCNGC 1 cut(s) 323
Sau3AI GATC 5 cut(s) 183, 261, 465, 735, 921
Sau96I GGNCC 1 cut(s) 191
ScaI AGTACT 1 cut(s) 33
SchI GAGTC 3 cut(s) 86, 739, 887
ScrFI CCNGG 3 cut(s) 599, 784, 996
SduI GDGCHC 2 cut(s) 256, 783
SfaNI GCATC 1 cut(s) 637
SfcI CTRYAG 1 cut(s) 650
SfoI GGCGCC 1 cut(s) 354
Sfr274I CTCGAG 1 cut(s) 5
SlaI CTCGAG 1 cut(s) 5
SmlI CTYRAG 2 cut(s) 5, 511
SmoI CTYRAG 2 cut(s) 5, 511
SpeI ACTAGT 1 cut(s) 80
Sse9I AATT 4 cut(s) 331, 1004, 1057, 1064
SsiI CCGC 1 cut(s) 256
SspDI GGCGCC 1 cut(s) 352
SspMI CTAG 5 cut(s) 41, 81, 143, 776, 845
StyD4I CCNGG 3 cut(s) 597, 782, 994
StyI CCWWGG 1 cut(s) 187
TaqI TCGA 5 cut(s) 6, 169, 461, 468, 664
TasI AATT 4 cut(s) 331, 1004, 1057, 1064
TatI WGTACW 2 cut(s) 31, 83
TfiI GAWTC 4 cut(s) 400, 482, 661, 1106
Tru1I TTAA 6 cut(s) 506, 512, 623, 825, 1020, 1143
Tru9I TTAA 6 cut(s) 506, 512, 623, 825, 1020, 1143
TscAI CASTG 2 cut(s) 738, 1018
TseI GCWGC 1 cut(s) 322
TspDTI ATGAA 6 cut(s) 49, 187, 281, 395, 656, 1157
TspGWI ACGGA 3 cut(s) 710, 759, 1118
TspRI CASTG 2 cut(s) 738, 1018
Vha464I CTTAAG 1 cut(s) 511
XhoI CTCGAG 1 cut(s) 5
XspI CTAG 5 cut(s) 41, 81, 143, 776, 845
ZrmI AGTACT 1 cut(s) 33
Zsp2I ATGCAT 1 cut(s) 856
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.