Cytochrome p450
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| DDE_Tnp_4 | PF13359 | 224 - 359 | 2.5e-18 | DDE superfamily endonuclease |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1214 |
| Acc65I | GGTACC | 1 cut(s) | 867 |
| AccB1I | GGYRCC | 3 cut(s) | 832, 867, 892 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 685 |
| AccBSI | CCGCTC | 1 cut(s) | 370 |
| AccII | CGCG | 1 cut(s) | 1023 |
| AclWI | GGATC | 2 cut(s) | 806, 819 |
| AcoI | YGGCCR | 1 cut(s) | 417 |
| AcsI | RAATTY | 2 cut(s) | 705, 805 |
| AfaI | GTAC | 4 cut(s) | 514, 625, 848, 869 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 312, 463, 591, 685 |
| AgeI | ACCGGT | 1 cut(s) | 522 |
| AgsI | TTSAA | 9 cut(s) | 12, 277, 560, 634, 760, 937, 991, 1191, 1250 |
| AjnI | CCWGG | 1 cut(s) | 414 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 95, 127, 833, 865 |
| AluBI | AGCT | 5 cut(s) | 23, 556, 977, 1149, 1278 |
| AluI | AGCT | 5 cut(s) | 23, 556, 977, 1149, 1278 |
| Alw21I | GWGCWC | 1 cut(s) | 1151 |
| AlwI | GGATC | 2 cut(s) | 806, 819 |
| Ama87I | CYCGRG | 2 cut(s) | 329, 341 |
| AoxI | GGCC | 5 cut(s) | 195, 228, 238, 403, 417 |
| ApaI | GGGCCC | 1 cut(s) | 199 |
| ApeKI | GCWGC | 3 cut(s) | 606, 674, 941 |
| ApoI | RAATTY | 2 cut(s) | 705, 805 |
| AsiGI | ACCGGT | 1 cut(s) | 522 |
| Asp718I | GGTACC | 1 cut(s) | 867 |
| AspS9I | GGNCC | 4 cut(s) | 195, 196, 229, 352 |
| AsuC2I | CCSGG | 6 cut(s) | 227, 437, 458, 592, 628, 915 |
| AsuHPI | GGTGA | 2 cut(s) | 850, 1290 |
| AsuII | TTCGAA | 1 cut(s) | 579 |
| AvaI | CYCGRG | 2 cut(s) | 329, 341 |
| AvaII | GGWCC | 1 cut(s) | 352 |
| BaeGI | GKGCMC | 2 cut(s) | 199, 897 |
| BalI | TGGCCA | 1 cut(s) | 419 |
| BamHI | GGATCC | 1 cut(s) | 811 |
| BanI | GGYRCC | 3 cut(s) | 832, 867, 892 |
| BanII | GRGCYC | 4 cut(s) | 199, 219, 336, 1151 |
| BbsI | GAAGAC | 1 cut(s) | 561 |
| Bbv12I | GWGCWC | 1 cut(s) | 1151 |
| BbvI | GCAGC | 3 cut(s) | 593, 686, 953 |
| BccI | CCATC | 2 cut(s) | 44, 1030 |
| BceAI | ACGGC | 1 cut(s) | 104 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 482, 516 |
| BciT130I | CCWGG | 1 cut(s) | 416 |
| BclI | TGATCA | 1 cut(s) | 1141 |
| BcnI | CCSGG | 6 cut(s) | 227, 437, 458, 592, 628, 915 |
| BfaI | CTAG | 3 cut(s) | 750, 1275, 1303 |
| BisI | GCNGC | 5 cut(s) | 153, 607, 675, 942, 959 |
| BlsI | GCNGC | 5 cut(s) | 154, 608, 676, 943, 960 |
| BmcAI | AGTACT | 1 cut(s) | 848 |
| Bme1390I | CCNGG | 7 cut(s) | 227, 416, 437, 458, 592, 628, 915 |
| Bme18I | GGWCC | 1 cut(s) | 352 |
| BmeT110I | CYCGRG | 2 cut(s) | 329, 341 |
| BmgT120I | GGNCC | 4 cut(s) | 195, 196, 229, 352 |
| BmiI | GGNNCC | 9 cut(s) | 197, 353, 354, 364, 427, 813, 834, 869, 894 |
| BmrFI | CCNGG | 7 cut(s) | 227, 416, 437, 458, 592, 628, 915 |
| BmsI | GCATC | 3 cut(s) | 682, 736, 895 |
| BpiI | GAAGAC | 1 cut(s) | 561 |
| Bpu14I | TTCGAA | 1 cut(s) | 579 |
| BpuMI | CCSGG | 6 cut(s) | 227, 437, 458, 592, 628, 915 |
| BsaJI | CCNNGG | 4 cut(s) | 225, 394, 881, 914 |
| BsaWI | WCCGGW | 3 cut(s) | 422, 522, 814 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 119, 149, 225, 255, 458, 488 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 312, 463, 591, 685 |
| Bse118I | RCCGGY | 2 cut(s) | 522, 835 |
| Bse3DI | GCAATG | 3 cut(s) | 915, 1113, 1289 |
| BseBI | CCWGG | 1 cut(s) | 416 |
| BseDI | CCNNGG | 4 cut(s) | 225, 394, 881, 914 |
| BseGI | GGATG | 3 cut(s) | 697, 928, 1129 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 312, 463, 591, 685 |
| BseMI | GCAATG | 3 cut(s) | 915, 1113, 1289 |
| BseMII | CTCAG | 3 cut(s) | 543, 724, 1166 |
| BseSI | GKGCMC | 2 cut(s) | 199, 897 |
| BseXI | GCAGC | 3 cut(s) | 593, 686, 953 |
| BseYI | CCCAGC | 2 cut(s) | 722, 1115 |
| BsgI | GTGCAG | 1 cut(s) | 367 |
| Bsh1236I | CGCG | 1 cut(s) | 1023 |
| BshFI | GGCC | 5 cut(s) | 197, 230, 240, 405, 419 |
| BshNI | GGYRCC | 3 cut(s) | 832, 867, 892 |
| BshTI | ACCGGT | 1 cut(s) | 522 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1151 |
| BsiHKCI | CYCGRG | 2 cut(s) | 329, 341 |
| BslFI | GGGAC | 2 cut(s) | 365, 1178 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 312, 463, 591, 685 |
| BsmFI | GGGAC | 2 cut(s) | 365, 1178 |
| BsmI | GAATGC | 1 cut(s) | 960 |
| BsnI | GGCC | 5 cut(s) | 197, 230, 240, 405, 419 |
| BsoBI | CYCGRG | 2 cut(s) | 329, 341 |
| Bsp119I | TTCGAA | 1 cut(s) | 579 |
| Bsp120I | GGGCCC | 1 cut(s) | 195 |
| Bsp1286I | GDGCHC | 5 cut(s) | 199, 219, 336, 897, 1151 |
| Bsp143I | GATC | 3 cut(s) | 658, 811, 1141 |
| Bsp68I | TCGCGA | 1 cut(s) | 1023 |
| BspANI | GGCC | 5 cut(s) | 197, 230, 240, 405, 419 |
| BspCNI | CTCAG | 3 cut(s) | 544, 723, 1165 |
| BspFNI | CGCG | 1 cut(s) | 1023 |
| BspLI | GGNNCC | 9 cut(s) | 197, 353, 354, 364, 427, 813, 834, 869, 894 |
| BspPI | GGATC | 2 cut(s) | 806, 819 |
| BspT104I | TTCGAA | 1 cut(s) | 579 |
| BspT107I | GGYRCC | 3 cut(s) | 832, 867, 892 |
| BsrBI | CCGCTC | 1 cut(s) | 370 |
| BsrDI | GCAATG | 3 cut(s) | 915, 1113, 1289 |
| BsrFI | RCCGGY | 2 cut(s) | 522, 835 |
| BssAI | RCCGGY | 2 cut(s) | 522, 835 |
| BssECI | CCNNGG | 4 cut(s) | 225, 394, 881, 914 |
| BssMI | GATC | 3 cut(s) | 658, 811, 1141 |
| BssT1I | CCWWGG | 1 cut(s) | 881 |
| Bst2UI | CCWGG | 1 cut(s) | 416 |
| Bst4CI | ACNGT | 2 cut(s) | 623, 950 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1112 |
| BstBI | TTCGAA | 1 cut(s) | 579 |
| BstC8I | GCNNGC | 2 cut(s) | 191, 195 |
| BstDEI | CTNAG | 4 cut(s) | 552, 710, 971, 1152 |
| BstF5I | GGATG | 3 cut(s) | 697, 928, 1129 |
| BstFNI | CGCG | 1 cut(s) | 1023 |
| BstKTI | GATC | 3 cut(s) | 661, 814, 1144 |
| BstMBI | GATC | 3 cut(s) | 658, 811, 1141 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 116, 411, 425, 883, 892, 967, 1112, 1235 |
| BstNI | CCWGG | 1 cut(s) | 416 |
| BstNSI | RCATGY | 1 cut(s) | 1062 |
| BstSCI | CCNGG | 7 cut(s) | 225, 414, 435, 456, 590, 626, 913 |
| BstSLI | GKGCMC | 2 cut(s) | 199, 897 |
| BstUI | CGCG | 1 cut(s) | 1023 |
| BstV1I | GCAGC | 3 cut(s) | 593, 686, 953 |
| BstV2I | GAAGAC | 1 cut(s) | 561 |
| BstX2I | RGATCY | 1 cut(s) | 811 |
| BstYI | RGATCY | 1 cut(s) | 811 |
| BsuRI | GGCC | 5 cut(s) | 197, 230, 240, 405, 419 |
| BtsCI | GGATG | 3 cut(s) | 697, 928, 1129 |
| BtuMI | TCGCGA | 1 cut(s) | 1023 |
| Cac8I | GCNNGC | 2 cut(s) | 191, 195 |
| Cfr10I | RCCGGY | 2 cut(s) | 522, 835 |
| Cfr13I | GGNCC | 4 cut(s) | 195, 196, 229, 352 |
| Csp6I | GTAC | 4 cut(s) | 513, 624, 847, 868 |
| CspAI | ACCGGT | 1 cut(s) | 522 |
| CviAII | CATG | 3 cut(s) | 107, 685, 1059 |
| CviQI | GTAC | 4 cut(s) | 513, 624, 847, 868 |
| DdeI | CTNAG | 4 cut(s) | 552, 710, 971, 1152 |
| DpnI | GATC | 3 cut(s) | 660, 813, 1143 |
| DpnII | GATC | 3 cut(s) | 658, 811, 1141 |
| EaeI | YGGCCR | 1 cut(s) | 417 |
| EciI | GGCGGA | 3 cut(s) | 370, 380, 401 |
| Ecl136II | GAGCTC | 1 cut(s) | 1149 |
| Eco130I | CCWWGG | 1 cut(s) | 881 |
| Eco24I | GRGCYC | 4 cut(s) | 199, 219, 336, 1151 |
| Eco32I | GATATC | 1 cut(s) | 444 |
| Eco47I | GGWCC | 1 cut(s) | 352 |
| Eco53kI | GAGCTC | 1 cut(s) | 1149 |
| Eco88I | CYCGRG | 2 cut(s) | 329, 341 |
| EcoICRI | GAGCTC | 1 cut(s) | 1149 |
| EcoO109I | RGGNCCY | 1 cut(s) | 352 |
| EcoRI | GAATTC | 2 cut(s) | 705, 805 |
| EcoRII | CCWGG | 1 cut(s) | 414 |
| EcoRV | GATATC | 1 cut(s) | 444 |
| EcoT14I | CCWWGG | 1 cut(s) | 881 |
| EcoT22I | ATGCAT | 1 cut(s) | 1225 |
| EcoT38I | GRGCYC | 4 cut(s) | 199, 219, 336, 1151 |
| ErhI | CCWWGG | 1 cut(s) | 881 |
| FaeI | CATG | 3 cut(s) | 110, 688, 1062 |
| FaqI | GGGAC | 2 cut(s) | 365, 1178 |
| FatI | CATG | 3 cut(s) | 106, 684, 1058 |
| FauI | CCCGC | 4 cut(s) | 124, 186, 188, 375 |
| FbaI | TGATCA | 1 cut(s) | 1141 |
| Fnu4HI | GCNGC | 5 cut(s) | 153, 607, 675, 942, 959 |
| FokI | GGATG | 3 cut(s) | 704, 935, 1136 |
| FriOI | GRGCYC | 4 cut(s) | 199, 219, 336, 1151 |
| Fsp4HI | GCNGC | 5 cut(s) | 153, 607, 675, 942, 959 |
| FspBI | CTAG | 3 cut(s) | 750, 1275, 1303 |
| GluI | GCNGC | 5 cut(s) | 153, 607, 675, 942, 959 |
| GsaI | CCCAGC | 2 cut(s) | 726, 1119 |
| HaeIII | GGCC | 5 cut(s) | 197, 230, 240, 405, 419 |
| Hin1II | CATG | 3 cut(s) | 110, 688, 1062 |
| HphI | GGTGA | 2 cut(s) | 850, 1290 |
| Hpy166II | GTNNAC | 1 cut(s) | 124 |
| Hpy188I | TCNGA | 8 cut(s) | 214, 290, 398, 466, 543, 811, 922, 1146 |
| Hpy188III | TCNNGA | 8 cut(s) | 203, 277, 477, 529, 662, 702, 1022, 1250 |
| Hpy8I | GTNNAC | 1 cut(s) | 124 |
| HpyAV | CCTTC | 6 cut(s) | 121, 283, 316, 754, 857, 1195 |
| HpyCH4III | ACNGT | 2 cut(s) | 623, 950 |
| HpyCH4V | TGCA | 8 cut(s) | 348, 674, 779, 908, 941, 1058, 1223, 1294 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 116, 411, 425, 883, 892, 967, 1112, 1235 |
| HpyF3I | CTNAG | 4 cut(s) | 552, 710, 971, 1152 |
| Hsp92II | CATG | 3 cut(s) | 110, 688, 1062 |
| KflI | GGGWCCC | 1 cut(s) | 352 |
| KpnI | GGTACC | 1 cut(s) | 871 |
| Ksp22I | TGATCA | 1 cut(s) | 1141 |
| Kzo9I | GATC | 3 cut(s) | 658, 811, 1141 |
| LmnI | GCTCC | 4 cut(s) | 368, 425, 491, 928 |
| Lsp1109I | GCAGC | 3 cut(s) | 593, 686, 953 |
| LweI | GCATC | 3 cut(s) | 682, 736, 895 |
| MaeI | CTAG | 3 cut(s) | 750, 1275, 1303 |
| MaeIII | GTNAC | 1 cut(s) | 798 |
| MalI | GATC | 3 cut(s) | 660, 813, 1143 |
| MbiI | CCGCTC | 1 cut(s) | 370 |
| MboI | GATC | 3 cut(s) | 658, 811, 1141 |
| MboII | GAAGA | 4 cut(s) | 561, 677, 1003, 1045 |
| MfeI | CAATTG | 3 cut(s) | 494, 601, 1191 |
| MflI | RGATCY | 1 cut(s) | 811 |
| MhlI | GDGCHC | 5 cut(s) | 199, 219, 336, 897, 1151 |
| MlsI | TGGCCA | 1 cut(s) | 419 |
| MluNI | TGGCCA | 1 cut(s) | 419 |
| MlyI | GAGTC | 4 cut(s) | 200, 263, 476, 763 |
| MmeI | TCCRAC | 3 cut(s) | 835, 900, 1101 |
| Mox20I | TGGCCA | 1 cut(s) | 419 |
| Mph1103I | ATGCAT | 1 cut(s) | 1225 |
| MscI | TGGCCA | 1 cut(s) | 419 |
| Msp20I | TGGCCA | 1 cut(s) | 419 |
| MspR9I | CCNGG | 7 cut(s) | 227, 416, 437, 458, 592, 628, 915 |
| MunI | CAATTG | 3 cut(s) | 494, 601, 1191 |
| Mva1269I | GAATGC | 1 cut(s) | 960 |
| MvaI | CCWGG | 1 cut(s) | 416 |
| MvnI | CGCG | 1 cut(s) | 1023 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 116, 411, 425, 883, 892, 967, 1112, 1235 |
| NciI | CCSGG | 6 cut(s) | 227, 437, 458, 592, 628, 915 |
| NdeII | GATC | 3 cut(s) | 658, 811, 1141 |
| NlaIII | CATG | 3 cut(s) | 110, 688, 1062 |
| NlaIV | GGNNCC | 9 cut(s) | 197, 353, 354, 364, 427, 813, 834, 869, 894 |
| NmeAIII | GCCGAG | 1 cut(s) | 216 |
| NruI | TCGCGA | 1 cut(s) | 1023 |
| NsiI | ATGCAT | 1 cut(s) | 1225 |
| NspI | RCATGY | 1 cut(s) | 1062 |
| NspV | TTCGAA | 1 cut(s) | 579 |
| PaeR7I | CTCGAG | 2 cut(s) | 329, 341 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 57 |
| PctI | GAATGC | 1 cut(s) | 960 |
| PfeI | GAWTC | 7 cut(s) | 5, 86, 399, 560, 841, 1018, 1253 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 685 |
| PinAI | ACCGGT | 1 cut(s) | 522 |
| PkrI | GCNGC | 5 cut(s) | 154, 608, 676, 943, 960 |
| PleI | GAGTC | 4 cut(s) | 200, 263, 475, 763 |
| PpsI | GAGTC | 4 cut(s) | 200, 263, 475, 763 |
| PpuMI | RGGWCCY | 1 cut(s) | 352 |
| PsiI | TTATAA | 1 cut(s) | 1214 |
| Psp124BI | GAGCTC | 1 cut(s) | 1151 |
| Psp5II | RGGWCCY | 1 cut(s) | 352 |
| Psp6I | CCWGG | 1 cut(s) | 414 |
| PspFI | CCCAGC | 2 cut(s) | 722, 1115 |
| PspGI | CCWGG | 1 cut(s) | 414 |
| PspN4I | GGNNCC | 9 cut(s) | 197, 353, 354, 364, 427, 813, 834, 869, 894 |
| PspOMI | GGGCCC | 1 cut(s) | 195 |
| PspPI | GGNCC | 4 cut(s) | 195, 196, 229, 352 |
| PspPPI | RGGWCCY | 1 cut(s) | 352 |
| PspXI | VCTCGAGB | 2 cut(s) | 329, 341 |
| PsuI | RGATCY | 1 cut(s) | 811 |
| RruI | TCGCGA | 1 cut(s) | 1023 |
| RsaI | GTAC | 4 cut(s) | 514, 625, 848, 869 |
| RsaNI | GTAC | 4 cut(s) | 513, 624, 847, 868 |
| SacI | GAGCTC | 1 cut(s) | 1151 |
| SatI | GCNGC | 5 cut(s) | 153, 607, 675, 942, 959 |
| Sau3AI | GATC | 3 cut(s) | 658, 811, 1141 |
| Sau96I | GGNCC | 4 cut(s) | 195, 196, 229, 352 |
| ScaI | AGTACT | 1 cut(s) | 848 |
| SchI | GAGTC | 4 cut(s) | 200, 263, 476, 763 |
| ScrFI | CCNGG | 7 cut(s) | 227, 416, 437, 458, 592, 628, 915 |
| SduI | GDGCHC | 5 cut(s) | 199, 219, 336, 897, 1151 |
| SetI | ASST | 9 cut(s) | 25, 284, 299, 308, 390, 558, 979, 1151, 1280 |
| SfaNI | GCATC | 3 cut(s) | 682, 736, 895 |
| Sfr274I | CTCGAG | 2 cut(s) | 329, 341 |
| SfuI | TTCGAA | 1 cut(s) | 579 |
| SinI | GGWCC | 1 cut(s) | 352 |
| SlaI | CTCGAG | 2 cut(s) | 329, 341 |
| SmlI | CTYRAG | 2 cut(s) | 329, 341 |
| SmoI | CTYRAG | 2 cut(s) | 329, 341 |
| SspI | AATATT | 1 cut(s) | 1260 |
| SspMI | CTAG | 3 cut(s) | 750, 1275, 1303 |
| SstI | GAGCTC | 1 cut(s) | 1151 |
| StyD4I | CCNGG | 7 cut(s) | 225, 414, 435, 456, 590, 626, 913 |
| StyI | CCWWGG | 1 cut(s) | 881 |
| TaaI | ACNGT | 2 cut(s) | 623, 950 |
| TaqII | GACCGA | 1 cut(s) | 1030 |
| TatI | WGTACW | 2 cut(s) | 512, 846 |
| TauI | GCSGC | 2 cut(s) | 155, 961 |
| TfiI | GAWTC | 7 cut(s) | 5, 86, 399, 560, 841, 1018, 1253 |
| TseI | GCWGC | 3 cut(s) | 606, 674, 941 |
| TspDTI | ATGAA | 2 cut(s) | 876, 1046 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 685 |
| VpaK11BI | GGWCC | 1 cut(s) | 352 |
| XapI | RAATTY | 2 cut(s) | 705, 805 |
| XceI | RCATGY | 1 cut(s) | 1062 |
| XhoI | CTCGAG | 2 cut(s) | 329, 341 |
| XspI | CTAG | 3 cut(s) | 750, 1275, 1303 |
| ZrmI | AGTACT | 1 cut(s) | 848 |
| Zsp2I | ATGCAT | 1 cut(s) | 1225 |