Rmu_ssc0000421.1_g000086

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000421.1
Physical Location & Seq
Reverse (-)
308699 .. 309325
627 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000421.1_g000086.1.cds

Sequence Viewer

Length: 627 bp
atgttttcgggtggcaccgatacatcatatacactcctagagtggacgatggcagagcttttgagacatccaagagtaatgaaaaaattgcaaaatgaggtcaggggaatagcgggaaacaaatcagagatcaacgaggatgatttgaatggtatgaactacttgaaggctgtgatcaaggaaactcttcgcttacatcctccgttaactttattattcaggatttcaactgaagatatgaaaataaagggttacaacgttaaagccaacacgcaaattatagttaacgcatggcagataggaagagatcctaaatcatacaacaacccagacaagtatgaaccagagaggttcttgaacagtgatgtagattataaagggaatcatttcgaatttattccatttggagctggaaggaggagctgccccggaattcagtatgccgcaatggttaatgagattgctttggcaaatttggtgcacaagttcgactggttagtgcctggtggagtaggcgcccatgacatagacatgactgaatccaccggcgtcaaaacacaaatgaagtatcctctgaaagccgttgctatcccatattcatataaaatcaagacagaggaattgtag

Protein Analysis

208

Amino Acids

23.63

Weight (kDa)

7.79

Isoelectric Point (pI)

25.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000061)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G48270 AT3G48280 AT3G48290 AT3G48290 AT3G48300 AT3G48300 AT3G48310 AT3G48320 AT4G20235 AT4G20235
fragaria_vesca FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g36190 FvH4_3g14160 FvH4_3g14210 FvH4_3g14260 FvH4_3g14260 FvH4_3g21100 FvH4_3g21380 FvH4_4g24460 FvH4_4g24500 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06572 FvH4_5g06573 FvH4_5g06574 FvH4_5g06575 FvH4_5g06576 FvH4_5g06577 FvH4_5g06577 FvH4_5g07540 FvH4_5g07550 FvH4_5g07560 FvH4_5g07570 FvH4_5g29491 FvH4_5g29492 FvH4_6g23870 FvH4_6g23880 FvH4_6g26870 FvH4_7g11861 FvH4_7g11862 FvH4_7g13050 FvH4_7g13060 FvH4_7g13080 FvH4_7g13080 FvH4_7g22630 FvH4_7g22650 FvH4_7g22651 FvH4_7g23020
malus_domestica MD03G1207400.v1.1 MD03G1214800.v1.1 MD03G1218500.v1.1 MD06G1163100.v1.1 MD06G1163300.v1.1 MD06G1163400.v1.1 MD06G1163500.v1.1 MD06G1163600.v1.1 MD06G1163800.v1.1 MD06G1164000.v1.1 MD06G1164100.v1.1 MD06G1224400.v1.1 MD08G1222800.v1.1 MD08G1222900.v1.1 MD08G1223100.v1.1 MD11G1091500.v1.1 MD11G1091800.v1.1 MD14G1163200.v1.1 MD14G1169000.v1.1 MD15G1207200.v1.1 MD15G1207300.v1.1 MD17G1259400.v1.1
prunus_persica Prupe.4G198100_v2.0.a1 Prupe.4G199100_v2.0.a1 Prupe.4G199400_v2.0.a1 Prupe.4G199800_v2.0.a1 Prupe.4G225200_v2.0.a1 Prupe.4G239100_v2.0.a1 Prupe.5G156600_v2.0.a1 Prupe.5G163500_v2.0.a1 Prupe.7G209500_v2.0.a1 Prupe.I003400_v2.0.a1
pyrus_communis pycom03g16340 pycom06g14600 pycom06g14610 pycom06g14620 pycom06g14630 pycom06g14640 pycom06g14670 pycom06g14690 pycom08g19390 pycom08g19400 pycom08g19410 pycom11g07600 pycom11g07610 pycom11g07620 pycom11g07660 pycom14g13580 pycom14g14080 pycom14g14100 pycom14g14110 pycom15g18380 pycom17g26080
rosa_chinensis RchiOBHm_Chr1g0339441 RchiOBHm_Chr1g0339451 RchiOBHm_Chr1g0352191 RchiOBHm_Chr1g0368221 RchiOBHm_Chr2g0129531 RchiOBHm_Chr2g0129541 RchiOBHm_Chr3g0477631 RchiOBHm_Chr3g0482551 RchiOBHm_Chr3g0482561 RchiOBHm_Chr3g0482571 RchiOBHm_Chr4g0411601 RchiOBHm_Chr4g0422181 RchiOBHm_Chr5g0036661 RchiOBHm_Chr5g0036731 RchiOBHm_Chr6g0274021 RchiOBHm_Chr7g0190921 RchiOBHm_Chr7g0190931 RchiOBHm_Chr7g0190941 RchiOBHm_Chr7g0190951 RchiOBHm_Chr7g0190961 RchiOBHm_Chr7g0190971 RchiOBHm_Chr7g0191001 RchiOBHm_Chr7g0191011 RchiOBHm_Chr7g0191021 RchiOBHm_Chr7g0192181 RchiOBHm_Chr7g0192191 RchiOBHm_Chr7g0192201 RchiOBHm_Chr7g0192221 RchiOBHm_Chr7g0192231 RchiOBHm_Chr7g0192281 RchiOBHm_Chr7g0197311
rosa_laevigata RLG00000003942 RLG00000004345 RLG00000004379 RLG00000004383 RLG00000004384 RLG00000004385 RLG00000004387 RLG00000004388 RLG00000004389 RLG00000004480 RLG00000004481 RLG00000004482 RLG00000004483 RLG00000004485 RLG00000008342 RLG00000008401 RLG00000013583 RLG00000017044 RLG00000027229 RLG00000028349 RLG00000028350 RLG00000028353 RLG00000028820 RLG00000033707 RLG00000033710
rosa_multiflora Rmu_co8020340.1_g000001 Rmu_co8096640.1_g000001 Rmu_co8214930.1_g000001 Rmu_co8223272.1_g000001 Rmu_co8282535.1_g000001 Rmu_co8343567.1_g000001 Rmu_co8404191.1_g000001 Rmu_co8455157.1_g000001 Rmu_sc0000062.1_g000028 Rmu_sc0000082.1_g000091 Rmu_sc0000509.1_g000017 Rmu_sc0000775.1_g000001 Rmu_sc0000999.1_g000034 Rmu_sc0001559.1_g000004 Rmu_sc0001559.1_g000009 Rmu_sc0002164.1_g000001 Rmu_sc0002164.1_g000005 Rmu_sc0002164.1_g000007 Rmu_sc0002164.1_g000008 Rmu_sc0002164.1_g000009 Rmu_sc0002164.1_g000019 Rmu_sc0002247.1_g000009 Rmu_sc0002373.1_g000002 Rmu_sc0002373.1_g000003 Rmu_sc0002944.1_g000059 Rmu_sc0003930.1_g000004 Rmu_sc0004958.1_g000001 Rmu_sc0005197.1_g000014 Rmu_sc0005898.1_g000008 Rmu_sc0005898.1_g000009 Rmu_sc0005898.1_g000015 Rmu_sc0006059.1_g000004 Rmu_sc0006059.1_g000010 Rmu_sc0006903.1_g000007 Rmu_sc0006903.1_g000008 Rmu_sc0006968.1_g000001 Rmu_sc0011009.1_g000009 Rmu_sc0022852.1_g000002 Rmu_sc0033854.1_g000001 Rmu_ssc0000421.1_g000057 Rmu_ssc0000421.1_g000067 Rmu_ssc0000421.1_g000069 Rmu_ssc0000421.1_g000072 Rmu_ssc0000421.1_g000081 Rmu_ssc0000421.1_g000086
rosa_roxburghii Rroxscaffold_158G00443680 Rroxscaffold_158G00443710 Rroxscaffold_158G00443720 Rroxscaffold_158G00443740 Rroxscaffold_1G00034950 Rroxscaffold_1G00044240 Rroxscaffold_1G00044270 Rroxscaffold_3G00241380 Rroxscaffold_3G00247000 Rroxscaffold_3G00263120 Rroxscaffold_3G00263150 Rroxscaffold_3G00263160 Rroxscaffold_3G00263170 Rroxscaffold_3G00263180 Rroxscaffold_3G00263190 Rroxscaffold_3G00263210 Rroxscaffold_3G00263230 Rroxscaffold_3G00263260 Rroxscaffold_3G00264110 Rroxscaffold_3G00264130 Rroxscaffold_3G00264160 Rroxscaffold_3G00264180 Rroxscaffold_3G00264200 Rroxscaffold_4G00288750 Rroxscaffold_4G00303110 Rroxscaffold_4G00303120 Rroxscaffold_4G00322280 Rroxscaffold_5G00356200 Rroxscaffold_6G00399150 Rroxscaffold_6G00399290 Rroxscaffold_7G00194770
rosa_rugosa Rorug01G0225300 Rorug01G0225400 Rorug01G0225800 Rorug01G0226000 Rorug01G0339400 Rorug01G0451500 Rorug03G0196900 Rorug03G0294900 Rorug04G0107500 Rorug04G0107600 Rorug04G0129700 Rorug04G0178000 Rorug05G0144900.1 Rorug05G0145000 Rorug05G0228000 Rorug05G0228600 Rorug06G0078300 Rorug06G0508000 Rorug06G0508100 Rorug06G0508100 Rorug06G0508400 Rorug06G0513400 Rorug07G0000100 Rorug07G0000200 Rorug07G0000300 Rorug07G0000500 Rorug07G0000800
rosa_samantha Rh1BG060400 Rh1BG210300 Rh1BG210700 Rh1BG210800 Rh1BG309800 Rh1CG223800 Rh1CG224200 Rh1CG325200 Rh1DG237000 Rh1DG237400 Rh1DG341600 Rh2DG365700 Rh3AG212500 Rh3AG248400 Rh3CG239800 Rh3DG239300 Rh4AG169300 Rh4BG166200 Rh4BG240500 Rh4BG240600 Rh4DG163600 Rh5AG249600 Rh5AG249900 Rh5AG250000 Rh5CG283100 Rh5CG283200 Rh5CG283400 Rh5DG259200 Rh5DG259800 Rh6BG197700 Rh6CG197800 Rh6DG189400 Rh7AG114900 Rh7AG115000 Rh7AG115200 Rh7AG115300 Rh7AG115400 Rh7AG115500 Rh7AG123900 Rh7AG124100 Rh7AG124300 Rh7BG117200 Rh7BG117400 Rh7BG118400 Rh7BG125400 Rh7BG125600 Rh7BG125700 Rh7BG125800 Rh7BG125900 Rh7BG126000 Rh7BG126400 Rh7BG126600 Rh7BG126700 Rh7BG166200 Rh7DG118600 Rh7DG118700 Rh7DG118900 Rh7DG119000 Rh7DG119100 Rh7DG127400 Rh7DG127600 Rh7DG127700 Rh7DG127900 Rh7DG128200
rosa_wichuraiana Rw1G013270 Rw1G020790 Rw2G027890 Rw2G028040 Rw3G019240 Rw4G014070 Rw4G020540 Rw5G021320 Rw5G022970 Rw6G016920 Rw7G010020 Rw7G010040 Rw7G010580 Rw7G010590 Rw7G010600 Rw7G010610 Rw7G010620 Rw7G010630 Rw7G010640 Rw7G010690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 375
AccB1I GGYRCC 2 cut(s) 14, 515
AciI CCGC 2 cut(s) 113, 444
AclI AACGTT 1 cut(s) 258
AclWI GGATC 1 cut(s) 302
AcsI RAATTY 3 cut(s) 392, 432, 472
AcuI CTGAAG 1 cut(s) 252
AcyI GRCGYC 2 cut(s) 516, 549
AgsI TTSAA 4 cut(s) 148, 166, 228, 358
AjnI CCWGG 1 cut(s) 502
AluBI AGCT 3 cut(s) 58, 410, 423
AluI AGCT 3 cut(s) 58, 410, 423
Alw21I GWGCWC 1 cut(s) 483
Alw26I GTCTC 1 cut(s) 58
Alw44I GTGCAC 1 cut(s) 479
AlwI GGATC 1 cut(s) 302
ApaLI GTGCAC 1 cut(s) 479
ApeKI GCWGC 1 cut(s) 423
ApoI RAATTY 3 cut(s) 392, 432, 472
Asp700I GAANNNNTTC 3 cut(s) 186, 386, 396
AspLEI GCGC 1 cut(s) 518
AsuC2I CCSGG 1 cut(s) 429
AsuII TTCGAA 1 cut(s) 390
BaeGI GKGCMC 1 cut(s) 483
BanI GGYRCC 2 cut(s) 14, 515
Bbv12I GWGCWC 1 cut(s) 483
BbvI GCAGC 1 cut(s) 410
BccI CCATC 1 cut(s) 43
BceAI ACGGC 1 cut(s) 566
BciT130I CCWGG 1 cut(s) 504
BciVI GTATCC 1 cut(s) 579
BclI TGATCA 1 cut(s) 174
BcnI CCSGG 1 cut(s) 429
BcoDI GTCTC 1 cut(s) 58
BfaI CTAG 1 cut(s) 38
BfoI RGCGCY 1 cut(s) 519
BfuI GTATCC 1 cut(s) 579
BisI GCNGC 2 cut(s) 424, 444
BlsI GCNGC 2 cut(s) 425, 445
Bme1390I CCNGG 2 cut(s) 429, 504
BmiI GGNNCC 2 cut(s) 16, 517
BmrFI CCNGG 2 cut(s) 429, 504
Bpu14I TTCGAA 1 cut(s) 390
BpuMI CCSGG 1 cut(s) 429
BsaHI GRCGYC 2 cut(s) 516, 549
BsaJI CCNNGG 1 cut(s) 427
Bse118I RCCGGY 1 cut(s) 545
Bse1I ACTGG 1 cut(s) 497
Bse3DI GCAATG 1 cut(s) 453
BseBI CCWGG 1 cut(s) 504
BseDI CCNNGG 1 cut(s) 427
BseGI GGATG 3 cut(s) 67, 145, 196
BseMI GCAATG 1 cut(s) 453
BseNI ACTGG 1 cut(s) 497
BseRI GAGGAG 1 cut(s) 433
BseSI GKGCMC 1 cut(s) 483
BseXI GCAGC 1 cut(s) 410
BshNI GGYRCC 2 cut(s) 14, 515
BsiHKAI GWGCWC 1 cut(s) 483
BsiSI CCGG 2 cut(s) 429, 546
BsmAI GTCTC 1 cut(s) 58
Bsp119I TTCGAA 1 cut(s) 390
Bsp1286I GDGCHC 1 cut(s) 483
Bsp143I GATC 3 cut(s) 129, 174, 307
BspACI CCGC 2 cut(s) 113, 444
BspLI GGNNCC 2 cut(s) 16, 517
BspPI GGATC 1 cut(s) 302
BspT104I TTCGAA 1 cut(s) 390
BspT107I GGYRCC 2 cut(s) 14, 515
BsrDI GCAATG 1 cut(s) 453
BsrFI RCCGGY 1 cut(s) 545
BsrI ACTGG 1 cut(s) 497
BssAI RCCGGY 1 cut(s) 545
BssECI CCNNGG 1 cut(s) 427
BssMI GATC 3 cut(s) 129, 174, 307
BssNI GRCGYC 2 cut(s) 516, 549
Bst2UI CCWGG 1 cut(s) 504
Bst4CI ACNGT 1 cut(s) 362
Bst6I CTCTTC 2 cut(s) 192, 298
BstACI GRCGYC 2 cut(s) 516, 549
BstBI TTCGAA 1 cut(s) 390
BstF5I GGATG 3 cut(s) 67, 145, 196
BstH2I RGCGCY 1 cut(s) 519
BstHHI GCGC 1 cut(s) 518
BstKTI GATC 3 cut(s) 132, 177, 310
BstMAI GTCTC 1 cut(s) 58
BstMBI GATC 3 cut(s) 129, 174, 307
BstNI CCWGG 1 cut(s) 504
BstSCI CCNGG 2 cut(s) 427, 502
BstSLI GKGCMC 1 cut(s) 483
BstV1I GCAGC 1 cut(s) 410
BstX2I RGATCY 1 cut(s) 307
BstYI RGATCY 1 cut(s) 307
BsuI GTATCC 1 cut(s) 579
BtsCI GGATG 3 cut(s) 67, 145, 196
BtsIMutI CAGTG 1 cut(s) 367
CfoI GCGC 1 cut(s) 518
Cfr10I RCCGGY 1 cut(s) 545
CseI GACGC 1 cut(s) 538
CviAII CATG 3 cut(s) 291, 521, 532
CviJI RGCY 6 cut(s) 58, 170, 266, 410, 423, 581
CviKI_1 RGCY 6 cut(s) 58, 170, 266, 410, 423, 581
DinI GGCGCC 1 cut(s) 517
DpnI GATC 3 cut(s) 131, 176, 309
DpnII GATC 3 cut(s) 129, 174, 307
Eam1104I CTCTTC 2 cut(s) 192, 298
EarI CTCTTC 2 cut(s) 192, 298
Eco57I CTGAAG 1 cut(s) 252
EcoRI GAATTC 1 cut(s) 432
EcoRII CCWGG 1 cut(s) 502
EgeI GGCGCC 1 cut(s) 517
EheI GGCGCC 1 cut(s) 517
FaeI CATG 3 cut(s) 294, 524, 535
FatI CATG 3 cut(s) 290, 520, 531
FauI CCCGC 1 cut(s) 106
FbaI TGATCA 1 cut(s) 174
Fnu4HI GCNGC 2 cut(s) 424, 444
FokI GGATG 3 cut(s) 54, 152, 183
Fsp4HI GCNGC 2 cut(s) 424, 444
FspBI CTAG 1 cut(s) 38
GlaI GCGC 1 cut(s) 517
GluI GCNGC 2 cut(s) 424, 444
HaeII RGCGCY 1 cut(s) 519
HapII CCGG 2 cut(s) 429, 546
HgaI GACGC 1 cut(s) 538
HhaI GCGC 1 cut(s) 518
Hin1I GRCGYC 2 cut(s) 516, 549
Hin1II CATG 3 cut(s) 294, 524, 535
Hin6I GCGC 1 cut(s) 516
HinP1I GCGC 1 cut(s) 516
HincII GTYRAC 2 cut(s) 207, 286
HindII GTYRAC 2 cut(s) 207, 286
HinfI GANTC 2 cut(s) 382, 539
HpaI GTTAAC 2 cut(s) 207, 286
HpaII CCGG 2 cut(s) 429, 546
Hpy166II GTNNAC 4 cut(s) 45, 207, 286, 481
Hpy188I TCNGA 2 cut(s) 127, 576
Hpy188III TCNNGA 3 cut(s) 220, 355, 610
Hpy8I GTNNAC 4 cut(s) 45, 207, 286, 481
HpyAV CCTTC 2 cut(s) 160, 408
HpyCH4III ACNGT 1 cut(s) 362
HpyCH4IV ACGT 1 cut(s) 258
HpyCH4V TGCA 2 cut(s) 91, 481
HpySE526I ACGT 1 cut(s) 258
Hsp92I GRCGYC 2 cut(s) 516, 549
Hsp92II CATG 3 cut(s) 294, 524, 535
HspAI GCGC 1 cut(s) 516
KasI GGCGCC 1 cut(s) 515
Ksp22I TGATCA 1 cut(s) 174
KspAI GTTAAC 2 cut(s) 207, 286
Kzo9I GATC 3 cut(s) 129, 174, 307
LmnI GCTCC 2 cut(s) 407, 420
Lsp1109I GCAGC 1 cut(s) 410
MaeI CTAG 1 cut(s) 38
MaeII ACGT 1 cut(s) 258
MaeIII GTNAC 1 cut(s) 251
MalI GATC 3 cut(s) 131, 176, 309
MboI GATC 3 cut(s) 129, 174, 307
MboII GAAGA 3 cut(s) 179, 245, 315
MflI RGATCY 1 cut(s) 307
MhlI GDGCHC 1 cut(s) 483
MluCI AATT 6 cut(s) 86, 276, 392, 432, 472, 620
Mly113I GGCGCC 1 cut(s) 516
MnlI CCTC 7 cut(s) 91, 130, 210, 342, 411, 582, 610
MroXI GAANNNNTTC 3 cut(s) 186, 386, 396
MseI TTAA 4 cut(s) 206, 261, 285, 453
MslI CAYNNNNRTG 1 cut(s) 530
MspI CCGG 2 cut(s) 429, 546
MspR9I CCNGG 2 cut(s) 429, 504
MvaI CCWGG 1 cut(s) 504
NarI GGCGCC 1 cut(s) 516
NciI CCSGG 1 cut(s) 429
NdeII GATC 3 cut(s) 129, 174, 307
NlaIII CATG 3 cut(s) 294, 524, 535
NlaIV GGNNCC 2 cut(s) 16, 517
NspV TTCGAA 1 cut(s) 390
PdmI GAANNNNTTC 3 cut(s) 186, 386, 396
PfeI GAWTC 2 cut(s) 382, 539
PkrI GCNGC 2 cut(s) 425, 445
PluTI GGCGCC 1 cut(s) 519
PsiI TTATAA 1 cut(s) 375
Psp1406I AACGTT 1 cut(s) 258
Psp6I CCWGG 1 cut(s) 502
PspGI CCWGG 1 cut(s) 502
PspN4I GGNNCC 2 cut(s) 16, 517
PsuI RGATCY 1 cut(s) 307
RseI CAYNNNNRTG 1 cut(s) 530
SaqAI TTAA 4 cut(s) 206, 261, 285, 453
SatI GCNGC 2 cut(s) 424, 444
Sau3AI GATC 3 cut(s) 129, 174, 307
ScrFI CCNGG 2 cut(s) 429, 504
SduI GDGCHC 1 cut(s) 483
SetI ASST 6 cut(s) 60, 102, 261, 353, 412, 425
SfoI GGCGCC 1 cut(s) 517
SfuI TTCGAA 1 cut(s) 390
SgrAI CRCCGGYG 1 cut(s) 545
SmiMI CAYNNNNRTG 1 cut(s) 530
Sse9I AATT 6 cut(s) 86, 276, 392, 432, 472, 620
SsiI CCGC 2 cut(s) 113, 444
SspDI GGCGCC 1 cut(s) 515
SspMI CTAG 1 cut(s) 38
StyD4I CCNGG 2 cut(s) 427, 502
TaaI ACNGT 1 cut(s) 362
TaiI ACGT 1 cut(s) 261
TaqI TCGA 2 cut(s) 390, 489
TasI AATT 6 cut(s) 86, 276, 392, 432, 472, 620
TauI GCSGC 1 cut(s) 446
TfiI GAWTC 2 cut(s) 382, 539
Tru1I TTAA 4 cut(s) 206, 261, 285, 453
Tru9I TTAA 4 cut(s) 206, 261, 285, 453
TscAI CASTG 1 cut(s) 367
TseI GCWGC 1 cut(s) 423
TspDTI ATGAA 6 cut(s) 95, 170, 254, 354, 578, 588
TspGWI ACGGA 1 cut(s) 192
TspRI CASTG 1 cut(s) 367
VneI GTGCAC 1 cut(s) 479
XapI RAATTY 3 cut(s) 392, 432, 472
XmnI GAANNNNTTC 3 cut(s) 186, 386, 396
XspI CTAG 1 cut(s) 38
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.