MD03G1207400.v1.1

Cytochrome p450

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
Physical Location & Seq
Forward (+)
28367260 .. 28369348
2089 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1207400.v1.1.491

Sequence Viewer

Length: 1545 bp
ATGTTTAATCTCCTGAGTAAAATCTTGTCAAGCTTGTTGGAAAATTTTTCCTTCAAGTACTTAGTATTTTTGTCCATATTCCTCATACTGATATACAGATGGTTCTCCATATCCACAAACTCATCACCACCTTCTCCACCAAAGCTCCCTGTCATTGGAAACCTCCACCAACTAGGCCCGCACATTCATCGCTCACTGAACACCTTAGCTCAACGCCATGGACCTATTATGCTGCTGCATTTCGGAAGCATGCCAGTCCTTGTTGTCTCTTCGGATGATACTGCCTGCGAGATCATGAAAACCCATGACATCACATTCGCCAACAGACCCAAGAGCATTTTCTTTAAGAAGGTTTGCTACAATTTCAAAGACGTGGCCTCGGCACCTTATGGTGAGTATTGGAGGCAGGTGAAAAGTATATGTGTTTTAAATCTCTTAAGTAACAAAAGGGTTCGTTCTTTTCGTGCTGTGAGAGAAGAAGAAACCGAATCCTTGATCACCAGGATAAGGCAGTCGTCAACATCAACATCATCAGTTGTGAATTTAAGCGAAATGCTTGAGACGCTTACTAATGATGTGTTGTGTAGAGTAGCACTGGGGGCGAAGAACAGTGATCGAGGCGAAGGTGGAAAGATGTTTAAGGAGTTTTCTGGGGAGATAGTGGCCTTGATGTCATGCATCCACATTGGAGACTATATCCCATGGCTTAGTTGGGTTGGCCGTCTCAATGGTTTGGAAGCAAAGTTTGACAATCTGGCTAAACGGGTCAATGAATTTCTAGAAATGGTTGTTCAAGAACATATGGATGATGCTCTTATCAAGAACGAGGACCAAAAGGATCTTGTGGACGTTTTACTTTGCCTTCAGAAAGAAGGAGTGCACATAGCTGATTCTCCTATTGATGGAGTTAGCATAAAGGCTATTATCTTGGATATGTTTGTTGCTGGCACCGATACCTCATTTACACTCCTAGAATGGACGATGTCTGAGTTGTTCAGACATCCAATGATCATGGAAAAACTGCAGAATGAGGTAAGGGGAATAGTCGGCAACAAAAGGGACATAATTAAAGAGGATGATTTGGTAGGGATGCACTACTTGAAAGCCGTGATCAAGGAAACTCTTCGTCTGCATCCTCCAGTACCATTACTAGTTCCCAGGATGTCGTCTCAAGATGCAACGATAAACGGTTACATCATTAAAGCCAACACACAAGTTATAGTGAATGCCTGGCAGATTGGAAGAGACCCAAAGTCATACAACAACCCGGAGGCGTACGAACCAGAAAGGTTCTTGAATAGTACACTAGATTATAAAGGGAATGACTTCCAGTACATTCCATTTGGAGCTGGCCGACGGGGTTGCCCAGGAATTCAGTTTGCCATGGCCGTCCAAGAGATTGCTTTGGCAAATTTAATGCACAAGTTTGATTGGGCACTGCCTAATGGTGCAGGAGGGGAGGACTTAGACATGACTGAGTCCACTGGAGCAAGCGTTCGTAGAGCATATCCTCTTAAAGTCGCCGCTATTCCATATTCGGGTTAA

Protein Analysis

515

Amino Acids

57.82

Weight (kDa)

6.68

Isoelectric Point (pI)

41.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 43 - 497 1.8e-101 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000061)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G48270 AT3G48280 AT3G48290 AT3G48290 AT3G48300 AT3G48300 AT3G48310 AT3G48320 AT4G20235 AT4G20235
fragaria_vesca FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g36190 FvH4_3g14160 FvH4_3g14210 FvH4_3g14260 FvH4_3g14260 FvH4_3g21100 FvH4_3g21380 FvH4_4g24460 FvH4_4g24500 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06572 FvH4_5g06573 FvH4_5g06574 FvH4_5g06575 FvH4_5g06576 FvH4_5g06577 FvH4_5g06577 FvH4_5g07540 FvH4_5g07550 FvH4_5g07560 FvH4_5g07570 FvH4_5g29491 FvH4_5g29492 FvH4_6g23870 FvH4_6g23880 FvH4_6g26870 FvH4_7g11861 FvH4_7g11862 FvH4_7g13050 FvH4_7g13060 FvH4_7g13080 FvH4_7g13080 FvH4_7g22630 FvH4_7g22650 FvH4_7g22651 FvH4_7g23020
malus_domestica MD03G1207400.v1.1 MD03G1214800.v1.1 MD03G1218500.v1.1 MD06G1163100.v1.1 MD06G1163300.v1.1 MD06G1163400.v1.1 MD06G1163500.v1.1 MD06G1163600.v1.1 MD06G1163800.v1.1 MD06G1164000.v1.1 MD06G1164100.v1.1 MD06G1224400.v1.1 MD08G1222800.v1.1 MD08G1222900.v1.1 MD08G1223100.v1.1 MD11G1091500.v1.1 MD11G1091800.v1.1 MD14G1163200.v1.1 MD14G1169000.v1.1 MD15G1207200.v1.1 MD15G1207300.v1.1 MD17G1259400.v1.1
prunus_persica Prupe.4G198100_v2.0.a1 Prupe.4G199100_v2.0.a1 Prupe.4G199400_v2.0.a1 Prupe.4G199800_v2.0.a1 Prupe.4G225200_v2.0.a1 Prupe.4G239100_v2.0.a1 Prupe.5G156600_v2.0.a1 Prupe.5G163500_v2.0.a1 Prupe.7G209500_v2.0.a1 Prupe.I003400_v2.0.a1
pyrus_communis pycom03g16340 pycom06g14600 pycom06g14610 pycom06g14620 pycom06g14630 pycom06g14640 pycom06g14670 pycom06g14690 pycom08g19390 pycom08g19400 pycom08g19410 pycom11g07600 pycom11g07610 pycom11g07620 pycom11g07660 pycom14g13580 pycom14g14080 pycom14g14100 pycom14g14110 pycom15g18380 pycom17g26080
rosa_chinensis RchiOBHm_Chr1g0339441 RchiOBHm_Chr1g0339451 RchiOBHm_Chr1g0352191 RchiOBHm_Chr1g0368221 RchiOBHm_Chr2g0129531 RchiOBHm_Chr2g0129541 RchiOBHm_Chr3g0477631 RchiOBHm_Chr3g0482551 RchiOBHm_Chr3g0482561 RchiOBHm_Chr3g0482571 RchiOBHm_Chr4g0411601 RchiOBHm_Chr4g0422181 RchiOBHm_Chr5g0036661 RchiOBHm_Chr5g0036731 RchiOBHm_Chr6g0274021 RchiOBHm_Chr7g0190921 RchiOBHm_Chr7g0190931 RchiOBHm_Chr7g0190941 RchiOBHm_Chr7g0190951 RchiOBHm_Chr7g0190961 RchiOBHm_Chr7g0190971 RchiOBHm_Chr7g0191001 RchiOBHm_Chr7g0191011 RchiOBHm_Chr7g0191021 RchiOBHm_Chr7g0192181 RchiOBHm_Chr7g0192191 RchiOBHm_Chr7g0192201 RchiOBHm_Chr7g0192221 RchiOBHm_Chr7g0192231 RchiOBHm_Chr7g0192281 RchiOBHm_Chr7g0197311
rosa_laevigata RLG00000003942 RLG00000004345 RLG00000004379 RLG00000004383 RLG00000004384 RLG00000004385 RLG00000004387 RLG00000004388 RLG00000004389 RLG00000004480 RLG00000004481 RLG00000004482 RLG00000004483 RLG00000004485 RLG00000008342 RLG00000008401 RLG00000013583 RLG00000017044 RLG00000027229 RLG00000028349 RLG00000028350 RLG00000028353 RLG00000028820 RLG00000033707 RLG00000033710
rosa_multiflora Rmu_co8020340.1_g000001 Rmu_co8096640.1_g000001 Rmu_co8214930.1_g000001 Rmu_co8223272.1_g000001 Rmu_co8282535.1_g000001 Rmu_co8343567.1_g000001 Rmu_co8404191.1_g000001 Rmu_co8455157.1_g000001 Rmu_sc0000062.1_g000028 Rmu_sc0000082.1_g000091 Rmu_sc0000509.1_g000017 Rmu_sc0000775.1_g000001 Rmu_sc0000999.1_g000034 Rmu_sc0001559.1_g000004 Rmu_sc0001559.1_g000009 Rmu_sc0002164.1_g000001 Rmu_sc0002164.1_g000005 Rmu_sc0002164.1_g000007 Rmu_sc0002164.1_g000008 Rmu_sc0002164.1_g000009 Rmu_sc0002164.1_g000019 Rmu_sc0002247.1_g000009 Rmu_sc0002373.1_g000002 Rmu_sc0002373.1_g000003 Rmu_sc0002944.1_g000059 Rmu_sc0003930.1_g000004 Rmu_sc0004958.1_g000001 Rmu_sc0005197.1_g000014 Rmu_sc0005898.1_g000008 Rmu_sc0005898.1_g000009 Rmu_sc0005898.1_g000015 Rmu_sc0006059.1_g000004 Rmu_sc0006059.1_g000010 Rmu_sc0006903.1_g000007 Rmu_sc0006903.1_g000008 Rmu_sc0006968.1_g000001 Rmu_sc0011009.1_g000009 Rmu_sc0022852.1_g000002 Rmu_sc0033854.1_g000001 Rmu_ssc0000421.1_g000057 Rmu_ssc0000421.1_g000067 Rmu_ssc0000421.1_g000069 Rmu_ssc0000421.1_g000072 Rmu_ssc0000421.1_g000081 Rmu_ssc0000421.1_g000086
rosa_roxburghii Rroxscaffold_158G00443680 Rroxscaffold_158G00443710 Rroxscaffold_158G00443720 Rroxscaffold_158G00443740 Rroxscaffold_1G00034950 Rroxscaffold_1G00044240 Rroxscaffold_1G00044270 Rroxscaffold_3G00241380 Rroxscaffold_3G00247000 Rroxscaffold_3G00263120 Rroxscaffold_3G00263150 Rroxscaffold_3G00263160 Rroxscaffold_3G00263170 Rroxscaffold_3G00263180 Rroxscaffold_3G00263190 Rroxscaffold_3G00263210 Rroxscaffold_3G00263230 Rroxscaffold_3G00263260 Rroxscaffold_3G00264110 Rroxscaffold_3G00264130 Rroxscaffold_3G00264160 Rroxscaffold_3G00264180 Rroxscaffold_3G00264200 Rroxscaffold_4G00288750 Rroxscaffold_4G00303110 Rroxscaffold_4G00303120 Rroxscaffold_4G00322280 Rroxscaffold_5G00356200 Rroxscaffold_6G00399150 Rroxscaffold_6G00399290 Rroxscaffold_7G00194770
rosa_rugosa Rorug01G0225300 Rorug01G0225400 Rorug01G0225800 Rorug01G0226000 Rorug01G0339400 Rorug01G0451500 Rorug03G0196900 Rorug03G0294900 Rorug04G0107500 Rorug04G0107600 Rorug04G0129700 Rorug04G0178000 Rorug05G0144900.1 Rorug05G0145000 Rorug05G0228000 Rorug05G0228600 Rorug06G0078300 Rorug06G0508000 Rorug06G0508100 Rorug06G0508100 Rorug06G0508400 Rorug06G0513400 Rorug07G0000100 Rorug07G0000200 Rorug07G0000300 Rorug07G0000500 Rorug07G0000800
rosa_samantha Rh1BG060400 Rh1BG210300 Rh1BG210700 Rh1BG210800 Rh1BG309800 Rh1CG223800 Rh1CG224200 Rh1CG325200 Rh1DG237000 Rh1DG237400 Rh1DG341600 Rh2DG365700 Rh3AG212500 Rh3AG248400 Rh3CG239800 Rh3DG239300 Rh4AG169300 Rh4BG166200 Rh4BG240500 Rh4BG240600 Rh4DG163600 Rh5AG249600 Rh5AG249900 Rh5AG250000 Rh5CG283100 Rh5CG283200 Rh5CG283400 Rh5DG259200 Rh5DG259800 Rh6BG197700 Rh6CG197800 Rh6DG189400 Rh7AG114900 Rh7AG115000 Rh7AG115200 Rh7AG115300 Rh7AG115400 Rh7AG115500 Rh7AG123900 Rh7AG124100 Rh7AG124300 Rh7BG117200 Rh7BG117400 Rh7BG118400 Rh7BG125400 Rh7BG125600 Rh7BG125700 Rh7BG125800 Rh7BG125900 Rh7BG126000 Rh7BG126400 Rh7BG126600 Rh7BG126700 Rh7BG166200 Rh7DG118600 Rh7DG118700 Rh7DG118900 Rh7DG119000 Rh7DG119100 Rh7DG127400 Rh7DG127600 Rh7DG127700 Rh7DG127900 Rh7DG128200
rosa_wichuraiana Rw1G013270 Rw1G020790 Rw2G027890 Rw2G028040 Rw3G019240 Rw4G014070 Rw4G020540 Rw5G021320 Rw5G022970 Rw6G016920 Rw7G010020 Rw7G010040 Rw7G010580 Rw7G010590 Rw7G010600 Rw7G010610 Rw7G010620 Rw7G010630 Rw7G010640 Rw7G010690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1314
AarI CACCTGC 1 cut(s) 397
Acc36I ACCTGC 1 cut(s) 397
AccB1I GGYRCC 2 cut(s) 382, 947
AciI CCGC 2 cut(s) 179, 1524
AclWI GGATC 1 cut(s) 846
AcoI YGGCCR 3 cut(s) 718, 1351, 1386
AcsI RAATTY 5 cut(s) 43, 541, 773, 1371, 1411
AcuI CTGAAG 1 cut(s) 848
AfaI GTAC 5 cut(s) 59, 1143, 1277, 1303, 1334
AfiI CCNNNNNNNGG 4 cut(s) 155, 507, 902, 1538
AflII CTTAAG 1 cut(s) 436
AgsI TTSAA 5 cut(s) 55, 367, 794, 1102, 1297
AhdI GACNNNNNGTC 1 cut(s) 1252
AhlI ACTAGT 1 cut(s) 1150
AjiI CACGTC 1 cut(s) 373
AjnI CCWGG 4 cut(s) 500, 1157, 1229, 1366
AjuI GAANNNNNNNTTGG 2 cut(s) 323, 355
AloI GAACNNNNNNTCC 2 cut(s) 1479, 1511
AluBI AGCT 5 cut(s) 33, 145, 209, 887, 1349
AluI AGCT 5 cut(s) 33, 145, 209, 887, 1349
Alw21I GWGCWC 1 cut(s) 882
Alw26I GTCTC 6 cut(s) 271, 554, 684, 728, 1173, 1239
Alw44I GTGCAC 1 cut(s) 878
AlwI GGATC 1 cut(s) 846
AoxI GGCC 6 cut(s) 175, 375, 663, 718, 1351, 1386
ApaLI GTGCAC 1 cut(s) 878
ApeKI GCWGC 2 cut(s) 232, 235
ApoI RAATTY 5 cut(s) 43, 541, 773, 1371, 1411
ArsI GACNNNNNNTTYG 2 cut(s) 299, 331
Asp700I GAANNNNTTC 2 cut(s) 1122, 1325
AspS9I GGNCC 3 cut(s) 176, 221, 829
AsuC2I CCSGG 1 cut(s) 1268
AsuHPI GGTGA 4 cut(s) 117, 404, 421, 490
AvaII GGWCC 2 cut(s) 221, 829
BaeGI GKGCMC 2 cut(s) 882, 1438
BanI GGYRCC 2 cut(s) 382, 947
BarI GAAGNNNNNNTAC 2 cut(s) 341, 373
Bbv12I GWGCWC 1 cut(s) 882
BbvI GCAGC 2 cut(s) 219, 222
BccI CCATC 2 cut(s) 93, 896
BceAI ACGGC 3 cut(s) 705, 1091, 1373
BcgI CGANNNNNNTGC 4 cut(s) 170, 204, 1344, 1378
BciT130I CCWGG 4 cut(s) 502, 1159, 1231, 1368
BclI TGATCA 3 cut(s) 495, 1008, 1110
BcnI CCSGG 1 cut(s) 1268
BcoDI GTCTC 6 cut(s) 271, 554, 684, 728, 1173, 1239
BcuI ACTAGT 1 cut(s) 1150
BfaI CTAG 5 cut(s) 173, 779, 971, 1151, 1307
BfmI CTRYAG 1 cut(s) 1022
BfrI CTTAAG 1 cut(s) 436
BfuAI ACCTGC 1 cut(s) 397
BisI GCNGC 3 cut(s) 233, 236, 1524
BlsI GCNGC 3 cut(s) 234, 237, 1525
BmcAI AGTACT 1 cut(s) 59
Bme1390I CCNGG 5 cut(s) 502, 1159, 1231, 1268, 1368
Bme18I GGWCC 2 cut(s) 221, 829
BmeRI GACNNNNNGTC 1 cut(s) 1252
BmgBI CACGTC 1 cut(s) 373
BmgT120I GGNCC 3 cut(s) 176, 221, 829
BmiI GGNNCC 2 cut(s) 384, 949
BmrFI CCNGG 5 cut(s) 502, 1159, 1231, 1268, 1368
BmrI ACTGGG 1 cut(s) 605
BmsI GCATC 5 cut(s) 687, 799, 1080, 1141, 1165
BmuI ACTGGG 1 cut(s) 605
BpmI CTGGAG 2 cut(s) 1122, 1506
Bpu10I CCTNAGC 1 cut(s) 205
BpuEI CTTGAG 2 cut(s) 578, 1155
BpuMI CCSGG 1 cut(s) 1268
BsaI GGTCTC 1 cut(s) 1239
BsaJI CCNNGG 6 cut(s) 217, 378, 701, 1157, 1366, 1383
BsaXI ACNNNNNCTCC 4 cut(s) 129, 159, 1479, 1509
Bsc4I CCNNNNNNNGG 4 cut(s) 155, 507, 902, 1538
Bse1I ACTGG 5 cut(s) 254, 600, 1139, 1330, 1489
BseBI CCWGG 4 cut(s) 502, 1159, 1231, 1368
BseDI CCNNGG 6 cut(s) 217, 378, 701, 1157, 1366, 1383
BseGI GGATG 8 cut(s) 280, 678, 811, 1000, 1081, 1095, 1132, 1167
BseLI CCNNNNNNNGG 4 cut(s) 155, 507, 902, 1538
BseMII CTCAG 3 cut(s) 5, 978, 1467
BseNI ACTGG 5 cut(s) 254, 600, 1139, 1330, 1489
BseSI GKGCMC 2 cut(s) 882, 1438
BseXI GCAGC 2 cut(s) 219, 222
BsgI GTGCAG 1 cut(s) 1470
BshFI GGCC 6 cut(s) 177, 377, 665, 720, 1353, 1388
BshNI GGYRCC 2 cut(s) 382, 947
BsiHKAI GWGCWC 1 cut(s) 882
BsiSI CCGG 1 cut(s) 1268
BsiWI CGTACG 1 cut(s) 1275
BslFI GGGAC 1 cut(s) 1073
BslI CCNNNNNNNGG 4 cut(s) 155, 507, 902, 1538
BsmAI GTCTC 6 cut(s) 271, 554, 684, 728, 1173, 1239
BsmBI CGTCTC 3 cut(s) 554, 728, 1173
BsmFI GGGAC 1 cut(s) 1073
BsmI GAATGC 1 cut(s) 1231
BsnI GGCC 6 cut(s) 177, 377, 665, 720, 1353, 1388
Bso31I GGTCTC 1 cut(s) 1239
Bsp1286I GDGCHC 2 cut(s) 882, 1438
Bsp143I GATC 6 cut(s) 291, 495, 613, 838, 1008, 1110
Bsp19I CCATGG 3 cut(s) 217, 701, 1383
BspACI CCGC 2 cut(s) 179, 1524
BspANI GGCC 6 cut(s) 177, 377, 665, 720, 1353, 1388
BspCNI CTCAG 3 cut(s) 6, 979, 1468
BspHI TCATGA 1 cut(s) 294
BspLI GGNNCC 2 cut(s) 384, 949
BspMAI CTGCAG 1 cut(s) 1026
BspMI ACCTGC 1 cut(s) 397
BspPI GGATC 1 cut(s) 846
BspT107I GGYRCC 2 cut(s) 382, 947
BspTI CTTAAG 1 cut(s) 436
BspTNI GGTCTC 1 cut(s) 1239
BsrI ACTGG 5 cut(s) 254, 600, 1139, 1330, 1489
BssECI CCNNGG 6 cut(s) 217, 378, 701, 1157, 1366, 1383
BssMI GATC 6 cut(s) 291, 495, 613, 838, 1008, 1110
BssT1I CCWWGG 3 cut(s) 217, 701, 1383
Bst2UI CCWGG 4 cut(s) 502, 1159, 1231, 1368
Bst4CI ACNGT 2 cut(s) 611, 1190
Bst6I CTCTTC 3 cut(s) 274, 1128, 1237
BstAFI CTTAAG 1 cut(s) 436
BstC8I GCNNGC 6 cut(s) 179, 251, 286, 946, 1351, 1492
BstDEI CTNAG 7 cut(s) 14, 61, 205, 707, 987, 1465, 1476
BstDSI CCRYGG 3 cut(s) 217, 701, 1383
BstF5I GGATG 8 cut(s) 280, 678, 811, 1000, 1081, 1095, 1132, 1167
BstKTI GATC 6 cut(s) 294, 498, 616, 841, 1011, 1113
BstMAI GTCTC 6 cut(s) 271, 554, 684, 728, 1173, 1239
BstMBI GATC 6 cut(s) 291, 495, 613, 838, 1008, 1110
BstMWI GCNNNNNNNGC 2 cut(s) 562, 599
BstNI CCWGG 4 cut(s) 502, 1159, 1231, 1368
BstNSI RCATGY 1 cut(s) 253
BstSCI CCNGG 5 cut(s) 500, 1157, 1229, 1266, 1366
BstSFI CTRYAG 1 cut(s) 1022
BstSLI GKGCMC 2 cut(s) 882, 1438
BstV1I GCAGC 2 cut(s) 219, 222
BstX2I RGATCY 1 cut(s) 838
BstYI RGATCY 1 cut(s) 838
BsuRI GGCC 6 cut(s) 177, 377, 665, 720, 1353, 1388
BtgI CCRYGG 3 cut(s) 217, 701, 1383
BtgZI GCGATG 1 cut(s) 173
BtrI CACGTC 1 cut(s) 373
BtsCI GGATG 8 cut(s) 280, 678, 811, 1000, 1081, 1095, 1132, 1167
BtsI GCAGTG 1 cut(s) 1436
BtsIMutI CAGTG 5 cut(s) 194, 593, 616, 1436, 1482
BveI ACCTGC 1 cut(s) 397
Cac8I GCNNGC 6 cut(s) 179, 251, 286, 946, 1351, 1492
CciI TCATGA 1 cut(s) 294
Cfr13I GGNCC 3 cut(s) 176, 221, 829
CseI GACGC 1 cut(s) 571
Csp6I GTAC 5 cut(s) 58, 1142, 1276, 1302, 1333
CviAII CATG 9 cut(s) 218, 250, 295, 305, 675, 702, 1012, 1384, 1471
CviQI GTAC 5 cut(s) 58, 1142, 1276, 1302, 1333
DdeI CTNAG 7 cut(s) 14, 61, 205, 707, 987, 1465, 1476
DpnI GATC 6 cut(s) 293, 497, 615, 840, 1010, 1112
DpnII GATC 6 cut(s) 291, 495, 613, 838, 1008, 1110
DraI TTTAAA 1 cut(s) 429
DriI GACNNNNNGTC 1 cut(s) 1252
EaeI YGGCCR 3 cut(s) 718, 1351, 1386
Eam1104I CTCTTC 3 cut(s) 274, 1128, 1237
Eam1105I GACNNNNNGTC 1 cut(s) 1252
EarI CTCTTC 3 cut(s) 274, 1128, 1237
Eco130I CCWWGG 3 cut(s) 217, 701, 1383
Eco31I GGTCTC 1 cut(s) 1239
Eco47I GGWCC 2 cut(s) 221, 829
Eco57I CTGAAG 1 cut(s) 848
EcoRI GAATTC 1 cut(s) 1371
EcoRII CCWGG 4 cut(s) 500, 1157, 1229, 1366
EcoT14I CCWWGG 3 cut(s) 217, 701, 1383
EcoT22I ATGCAT 1 cut(s) 680
ErhI CCWWGG 3 cut(s) 217, 701, 1383
Esp3I CGTCTC 3 cut(s) 554, 728, 1173
FaeI CATG 9 cut(s) 221, 253, 298, 308, 678, 705, 1015, 1387, 1474
FaqI GGGAC 1 cut(s) 1073
FatI CATG 9 cut(s) 217, 249, 294, 304, 674, 701, 1011, 1383, 1470
FauI CCCGC 1 cut(s) 186
FauNDI CATATG 1 cut(s) 801
FbaI TGATCA 3 cut(s) 495, 1008, 1110
Fnu4HI GCNGC 3 cut(s) 233, 236, 1524
FokI GGATG 8 cut(s) 287, 665, 818, 987, 1088, 1102, 1119, 1174
Fsp4HI GCNGC 3 cut(s) 233, 236, 1524
FspBI CTAG 5 cut(s) 173, 779, 971, 1151, 1307
GluI GCNGC 3 cut(s) 233, 236, 1524
GsuI CTGGAG 2 cut(s) 1122, 1506
HaeIII GGCC 6 cut(s) 177, 377, 665, 720, 1353, 1388
HapII CCGG 1 cut(s) 1268
HgaI GACGC 1 cut(s) 571
Hin1II CATG 9 cut(s) 221, 253, 298, 308, 678, 705, 1015, 1387, 1474
HincII GTYRAC 1 cut(s) 519
HindII GTYRAC 1 cut(s) 519
HindIII AAGCTT 1 cut(s) 31
HinfI GANTC 3 cut(s) 488, 890, 1478
HpaII CCGG 1 cut(s) 1268
HphI GGTGA 4 cut(s) 117, 404, 421, 490
Hpy166II GTNNAC 5 cut(s) 519, 847, 880, 1304, 1482
Hpy188I TCNGA 5 cut(s) 245, 274, 867, 988, 998
Hpy188III TCNNGA 7 cut(s) 13, 295, 779, 794, 820, 1172, 1294
Hpy8I GTNNAC 5 cut(s) 519, 847, 880, 1304, 1482
Hpy99I CGWCG 1 cut(s) 1359
HpyAV CCTTC 6 cut(s) 61, 141, 343, 617, 866, 872
HpyCH4III ACNGT 2 cut(s) 611, 1190
HpyCH4IV ACGT 2 cut(s) 372, 849
HpyCH4V TGCA 9 cut(s) 238, 678, 880, 1024, 1093, 1132, 1178, 1420, 1451
HpyF10VI GCNNNNNNNGC 2 cut(s) 562, 599
HpyF3I CTNAG 7 cut(s) 14, 61, 205, 707, 987, 1465, 1476
HpySE526I ACGT 2 cut(s) 372, 849
Hsp92II CATG 9 cut(s) 221, 253, 298, 308, 678, 705, 1015, 1387, 1474
Ksp22I TGATCA 3 cut(s) 495, 1008, 1110
Kzo9I GATC 6 cut(s) 291, 495, 613, 838, 1008, 1110
LmnI GCTCC 3 cut(s) 150, 1346, 1487
Lsp1109I GCAGC 2 cut(s) 219, 222
LweI GCATC 5 cut(s) 687, 799, 1080, 1141, 1165
MaeI CTAG 5 cut(s) 173, 779, 971, 1151, 1307
MaeII ACGT 2 cut(s) 372, 849
MaeIII GTNAC 2 cut(s) 440, 1190
MalI GATC 6 cut(s) 293, 497, 615, 840, 1010, 1112
MboI GATC 6 cut(s) 291, 495, 613, 838, 1008, 1110
MboII GAAGA 6 cut(s) 261, 488, 491, 616, 1115, 1254
MflI RGATCY 1 cut(s) 838
MhlI GDGCHC 2 cut(s) 882, 1438
MluCI AATT 7 cut(s) 43, 361, 541, 773, 1065, 1371, 1411
MlyI GAGTC 1 cut(s) 1487
MmeI TCCRAC 1 cut(s) 18
Mph1103I ATGCAT 1 cut(s) 680
MroXI GAANNNNTTC 2 cut(s) 1122, 1325
MslI CAYNNNNRTG 1 cut(s) 804
MspCI CTTAAG 1 cut(s) 436
MspI CCGG 1 cut(s) 1268
MspR9I CCNGG 5 cut(s) 502, 1159, 1231, 1268, 1368
Mva1269I GAATGC 1 cut(s) 1231
MvaI CCWGG 4 cut(s) 502, 1159, 1231, 1368
MwoI GCNNNNNNNGC 2 cut(s) 562, 599
NciI CCSGG 1 cut(s) 1268
NcoI CCATGG 3 cut(s) 217, 701, 1383
NdeI CATATG 1 cut(s) 801
NdeII GATC 6 cut(s) 291, 495, 613, 838, 1008, 1110
NlaIII CATG 9 cut(s) 221, 253, 298, 308, 678, 705, 1015, 1387, 1474
NlaIV GGNNCC 2 cut(s) 384, 949
NmeAIII GCCGAG 1 cut(s) 359
NsiI ATGCAT 1 cut(s) 680
NspI RCATGY 1 cut(s) 253
PaeI GCATGC 1 cut(s) 253
PagI TCATGA 1 cut(s) 294
PaqCI CACCTGC 1 cut(s) 397
PcsI WCGNNNNNNNCGW 1 cut(s) 460
PctI GAATGC 1 cut(s) 1231
PdmI GAANNNNTTC 2 cut(s) 1122, 1325
PfeI GAWTC 2 cut(s) 488, 890
Pfl23II CGTACG 1 cut(s) 1275
PflFI GACNNNGTC 2 cut(s) 982, 1477
PkrI GCNGC 3 cut(s) 234, 237, 1525
PleI GAGTC 1 cut(s) 1486
PpsI GAGTC 1 cut(s) 1486
PsiI TTATAA 1 cut(s) 1314
Psp6I CCWGG 4 cut(s) 500, 1157, 1229, 1366
PspGI CCWGG 4 cut(s) 500, 1157, 1229, 1366
PspLI CGTACG 1 cut(s) 1275
PspN4I GGNNCC 2 cut(s) 384, 949
PspPI GGNCC 3 cut(s) 176, 221, 829
PstI CTGCAG 1 cut(s) 1026
PsuI RGATCY 1 cut(s) 838
PsyI GACNNNGTC 2 cut(s) 982, 1477
RsaI GTAC 5 cut(s) 59, 1143, 1277, 1303, 1334
RsaNI GTAC 5 cut(s) 58, 1142, 1276, 1302, 1333
RseI CAYNNNNRTG 1 cut(s) 804
SatI GCNGC 3 cut(s) 233, 236, 1524
Sau3AI GATC 6 cut(s) 291, 495, 613, 838, 1008, 1110
Sau96I GGNCC 3 cut(s) 176, 221, 829
ScaI AGTACT 1 cut(s) 59
SchI GAGTC 1 cut(s) 1487
ScrFI CCNGG 5 cut(s) 502, 1159, 1231, 1268, 1368
SduI GDGCHC 2 cut(s) 882, 1438
SfaNI GCATC 5 cut(s) 687, 799, 1080, 1141, 1165
SfcI CTRYAG 1 cut(s) 1022
SinI GGWCC 2 cut(s) 221, 829
SmiMI CAYNNNNRTG 1 cut(s) 804
SmlI CTYRAG 3 cut(s) 436, 557, 1170
SmoI CTYRAG 3 cut(s) 436, 557, 1170
SpeI ACTAGT 1 cut(s) 1150
SphI GCATGC 1 cut(s) 253
Sse9I AATT 7 cut(s) 43, 361, 541, 773, 1065, 1371, 1411
SsiI CCGC 2 cut(s) 179, 1524
SspMI CTAG 5 cut(s) 173, 779, 971, 1151, 1307
StyD4I CCNGG 5 cut(s) 500, 1157, 1229, 1266, 1366
StyI CCWWGG 3 cut(s) 217, 701, 1383
TaaI ACNGT 2 cut(s) 611, 1190
TaiI ACGT 2 cut(s) 375, 852
TaqI TCGA 1 cut(s) 616
TasI AATT 7 cut(s) 43, 361, 541, 773, 1065, 1371, 1411
TatI WGTACW 3 cut(s) 57, 1301, 1332
TauI GCSGC 1 cut(s) 1526
TfiI GAWTC 2 cut(s) 488, 890
TscAI CASTG 5 cut(s) 201, 600, 616, 1443, 1489
TseI GCWGC 2 cut(s) 232, 235
TspDTI ATGAA 3 cut(s) 176, 311, 786
TspRI CASTG 5 cut(s) 201, 600, 616, 1443, 1489
Tth111I GACNNNGTC 2 cut(s) 982, 1477
Vha464I CTTAAG 1 cut(s) 436
VneI GTGCAC 1 cut(s) 878
VpaK11BI GGWCC 2 cut(s) 221, 829
XapI RAATTY 5 cut(s) 43, 541, 773, 1371, 1411
XbaI TCTAGA 1 cut(s) 778
XceI RCATGY 1 cut(s) 253
XcmI CCANNNNNNNNNTGG 1 cut(s) 708
XmnI GAANNNNTTC 2 cut(s) 1122, 1325
XspI CTAG 5 cut(s) 173, 779, 971, 1151, 1307
ZrmI AGTACT 1 cut(s) 59
Zsp2I ATGCAT 1 cut(s) 680
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.