Rh7AG115500

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Forward (+)
8996665 .. 9001830
5166 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG115500.1

Sequence Viewer

Length: 1416 bp
ATGAATCTCCGGAAAATAATGGCGGAGCTGATCAATAATGAAACCCTTCCGATAGTACTTGTTGCCACTTTCTTCATTCTCCTATACAGGTGGTTTTCCACTTCCACTTCTACTAGAACAAACTCACCACCTTCTCCACCAAAACTCCCCATCATCGGAAATCTTCACCAACTAGGCTCATCAAGGTCTCCGCCACATCTCGCACTCCAAGCCTTGTCTCAGGTCCATGGCCCTCTCATGCTCCTCCACTTCGGAAGCGTCCCCGTCCTCGTCGTCTCATCGGCAGAGGGTGCTCAGGCGATCATGAAAACACATGACCTCAATTTCTGCACCAGGCCCAAGTCCACCGTCTTCGCAAAGCTTCTATACAACTCAAACGATGTGGCCACCGCGCCTTACGGCGAGTATTGGAGGCAGGTGAAGAGCATATGCGTGTTGAATCTGTTGAACACCAAAAGGGTTCGGTCTTACTGTGGGGTTAGGGAAGAGGAAACCAAAGCCATGATCAAGCAGATAAGGGATTCAAAAGGAGTAGTGAATTTGAGGGACATGCTTATGACGCTTACAAACGATGTCGTCTCGAGAGTGGCTCTAGGGAAGAGTTACTACAGTGATGGGGGTTTTAAAGAGCTTTCGGTGGATCATACGGAGTTACTGGGAAGTCTTTATATTGGGGACTATATTCCATGGCTTGGTTGGTTGAGCCGTGTCACTGGTTTGGACGCGAAACTAGACAAAGTGGCTAAACGGTTTGATGACTTCTTGGATGTTGTAATTCAAGAGCATATGGATAATACTGATCAGAAGGAGGAGGACCAAAAGGATTTTATAGACGTTTTACTTGAGATTCAGAAGGAAAACTCGCTTGGTTTTCGTATTGACAGAGTTAGCATTAAGGGTGTCGTCTTGGATATGTTTCTTGCTGGGACCGATACCACAGCTACACTTCTAGAATGGGCCATGTCTGAGATTATAAAGCACCCAAGTGTTATGAGCAAATTGCAGAATGAAGCCATACAAATGCTGGATGGTCTGCAATATGACATCATCCGGACCGGGTATCACAATGGTGGGTTTCGCTCAAGACTACCACTTGACGAGCAGTCGGACAATCTTGAGATGGATGTATTAGGGTTTGAAACAGTAACGAAAAGGAAATGGACGGAGGAGAAGAGAAAGAATAATGTTCATGTTGTCATGTCCGAGCCAACAGCAGCTGCGATGGAGGGGCAGCATGGAGAATCGTCGGATCCATTGGACAAAGCCCTGTTCGGCCCTTCGTTGAACAAAGCTGGCATGCTCGCAATAGAAGTACTGAATGGCAGGCTGAAGCGTGATATCATCAAGACTGGGTATTTTAATGGTGGGATTGGTTCAGAATTGAAGATTGATAAGATGCTAGAATGCCCTCGTTAA

Protein Analysis

471

Amino Acids

52.85

Weight (kDa)

6.44

Isoelectric Point (pI)

39.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 43 - 342 1.2e-44 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000061)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G48270 AT3G48280 AT3G48290 AT3G48290 AT3G48300 AT3G48300 AT3G48310 AT3G48320 AT4G20235 AT4G20235
fragaria_vesca FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g36190 FvH4_3g14160 FvH4_3g14210 FvH4_3g14260 FvH4_3g14260 FvH4_3g21100 FvH4_3g21380 FvH4_4g24460 FvH4_4g24500 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06572 FvH4_5g06573 FvH4_5g06574 FvH4_5g06575 FvH4_5g06576 FvH4_5g06577 FvH4_5g06577 FvH4_5g07540 FvH4_5g07550 FvH4_5g07560 FvH4_5g07570 FvH4_5g29491 FvH4_5g29492 FvH4_6g23870 FvH4_6g23880 FvH4_6g26870 FvH4_7g11861 FvH4_7g11862 FvH4_7g13050 FvH4_7g13060 FvH4_7g13080 FvH4_7g13080 FvH4_7g22630 FvH4_7g22650 FvH4_7g22651 FvH4_7g23020
malus_domestica MD03G1207400.v1.1 MD03G1214800.v1.1 MD03G1218500.v1.1 MD06G1163100.v1.1 MD06G1163300.v1.1 MD06G1163400.v1.1 MD06G1163500.v1.1 MD06G1163600.v1.1 MD06G1163800.v1.1 MD06G1164000.v1.1 MD06G1164100.v1.1 MD06G1224400.v1.1 MD08G1222800.v1.1 MD08G1222900.v1.1 MD08G1223100.v1.1 MD11G1091500.v1.1 MD11G1091800.v1.1 MD14G1163200.v1.1 MD14G1169000.v1.1 MD15G1207200.v1.1 MD15G1207300.v1.1 MD17G1259400.v1.1
prunus_persica Prupe.4G198100_v2.0.a1 Prupe.4G199100_v2.0.a1 Prupe.4G199400_v2.0.a1 Prupe.4G199800_v2.0.a1 Prupe.4G225200_v2.0.a1 Prupe.4G239100_v2.0.a1 Prupe.5G156600_v2.0.a1 Prupe.5G163500_v2.0.a1 Prupe.7G209500_v2.0.a1 Prupe.I003400_v2.0.a1
pyrus_communis pycom03g16340 pycom06g14600 pycom06g14610 pycom06g14620 pycom06g14630 pycom06g14640 pycom06g14670 pycom06g14690 pycom08g19390 pycom08g19400 pycom08g19410 pycom11g07600 pycom11g07610 pycom11g07620 pycom11g07660 pycom14g13580 pycom14g14080 pycom14g14100 pycom14g14110 pycom15g18380 pycom17g26080
rosa_chinensis RchiOBHm_Chr1g0339441 RchiOBHm_Chr1g0339451 RchiOBHm_Chr1g0352191 RchiOBHm_Chr1g0368221 RchiOBHm_Chr2g0129531 RchiOBHm_Chr2g0129541 RchiOBHm_Chr3g0477631 RchiOBHm_Chr3g0482551 RchiOBHm_Chr3g0482561 RchiOBHm_Chr3g0482571 RchiOBHm_Chr4g0411601 RchiOBHm_Chr4g0422181 RchiOBHm_Chr5g0036661 RchiOBHm_Chr5g0036731 RchiOBHm_Chr6g0274021 RchiOBHm_Chr7g0190921 RchiOBHm_Chr7g0190931 RchiOBHm_Chr7g0190941 RchiOBHm_Chr7g0190951 RchiOBHm_Chr7g0190961 RchiOBHm_Chr7g0190971 RchiOBHm_Chr7g0191001 RchiOBHm_Chr7g0191011 RchiOBHm_Chr7g0191021 RchiOBHm_Chr7g0192181 RchiOBHm_Chr7g0192191 RchiOBHm_Chr7g0192201 RchiOBHm_Chr7g0192221 RchiOBHm_Chr7g0192231 RchiOBHm_Chr7g0192281 RchiOBHm_Chr7g0197311
rosa_laevigata RLG00000003942 RLG00000004345 RLG00000004379 RLG00000004383 RLG00000004384 RLG00000004385 RLG00000004387 RLG00000004388 RLG00000004389 RLG00000004480 RLG00000004481 RLG00000004482 RLG00000004483 RLG00000004485 RLG00000008342 RLG00000008401 RLG00000013583 RLG00000017044 RLG00000027229 RLG00000028349 RLG00000028350 RLG00000028353 RLG00000028820 RLG00000033707 RLG00000033710
rosa_multiflora Rmu_co8020340.1_g000001 Rmu_co8096640.1_g000001 Rmu_co8214930.1_g000001 Rmu_co8223272.1_g000001 Rmu_co8282535.1_g000001 Rmu_co8343567.1_g000001 Rmu_co8404191.1_g000001 Rmu_co8455157.1_g000001 Rmu_sc0000062.1_g000028 Rmu_sc0000082.1_g000091 Rmu_sc0000509.1_g000017 Rmu_sc0000775.1_g000001 Rmu_sc0000999.1_g000034 Rmu_sc0001559.1_g000004 Rmu_sc0001559.1_g000009 Rmu_sc0002164.1_g000001 Rmu_sc0002164.1_g000005 Rmu_sc0002164.1_g000007 Rmu_sc0002164.1_g000008 Rmu_sc0002164.1_g000009 Rmu_sc0002164.1_g000019 Rmu_sc0002247.1_g000009 Rmu_sc0002373.1_g000002 Rmu_sc0002373.1_g000003 Rmu_sc0002944.1_g000059 Rmu_sc0003930.1_g000004 Rmu_sc0004958.1_g000001 Rmu_sc0005197.1_g000014 Rmu_sc0005898.1_g000008 Rmu_sc0005898.1_g000009 Rmu_sc0005898.1_g000015 Rmu_sc0006059.1_g000004 Rmu_sc0006059.1_g000010 Rmu_sc0006903.1_g000007 Rmu_sc0006903.1_g000008 Rmu_sc0006968.1_g000001 Rmu_sc0011009.1_g000009 Rmu_sc0022852.1_g000002 Rmu_sc0033854.1_g000001 Rmu_ssc0000421.1_g000057 Rmu_ssc0000421.1_g000067 Rmu_ssc0000421.1_g000069 Rmu_ssc0000421.1_g000072 Rmu_ssc0000421.1_g000081 Rmu_ssc0000421.1_g000086
rosa_roxburghii Rroxscaffold_158G00443680 Rroxscaffold_158G00443710 Rroxscaffold_158G00443720 Rroxscaffold_158G00443740 Rroxscaffold_1G00034950 Rroxscaffold_1G00044240 Rroxscaffold_1G00044270 Rroxscaffold_3G00241380 Rroxscaffold_3G00247000 Rroxscaffold_3G00263120 Rroxscaffold_3G00263150 Rroxscaffold_3G00263160 Rroxscaffold_3G00263170 Rroxscaffold_3G00263180 Rroxscaffold_3G00263190 Rroxscaffold_3G00263210 Rroxscaffold_3G00263230 Rroxscaffold_3G00263260 Rroxscaffold_3G00264110 Rroxscaffold_3G00264130 Rroxscaffold_3G00264160 Rroxscaffold_3G00264180 Rroxscaffold_3G00264200 Rroxscaffold_4G00288750 Rroxscaffold_4G00303110 Rroxscaffold_4G00303120 Rroxscaffold_4G00322280 Rroxscaffold_5G00356200 Rroxscaffold_6G00399150 Rroxscaffold_6G00399290 Rroxscaffold_7G00194770
rosa_rugosa Rorug01G0225300 Rorug01G0225400 Rorug01G0225800 Rorug01G0226000 Rorug01G0339400 Rorug01G0451500 Rorug03G0196900 Rorug03G0294900 Rorug04G0107500 Rorug04G0107600 Rorug04G0129700 Rorug04G0178000 Rorug05G0144900.1 Rorug05G0145000 Rorug05G0228000 Rorug05G0228600 Rorug06G0078300 Rorug06G0508000 Rorug06G0508100 Rorug06G0508100 Rorug06G0508400 Rorug06G0513400 Rorug07G0000100 Rorug07G0000200 Rorug07G0000300 Rorug07G0000500 Rorug07G0000800
rosa_samantha Rh1BG060400 Rh1BG210300 Rh1BG210700 Rh1BG210800 Rh1BG309800 Rh1CG223800 Rh1CG224200 Rh1CG325200 Rh1DG237000 Rh1DG237400 Rh1DG341600 Rh2DG365700 Rh3AG212500 Rh3AG248400 Rh3CG239800 Rh3DG239300 Rh4AG169300 Rh4BG166200 Rh4BG240500 Rh4BG240600 Rh4DG163600 Rh5AG249600 Rh5AG249900 Rh5AG250000 Rh5CG283100 Rh5CG283200 Rh5CG283400 Rh5DG259200 Rh5DG259800 Rh6BG197700 Rh6CG197800 Rh6DG189400 Rh7AG114900 Rh7AG115000 Rh7AG115200 Rh7AG115300 Rh7AG115400 Rh7AG115500 Rh7AG123900 Rh7AG124100 Rh7AG124300 Rh7BG117200 Rh7BG117400 Rh7BG118400 Rh7BG125400 Rh7BG125600 Rh7BG125700 Rh7BG125800 Rh7BG125900 Rh7BG126000 Rh7BG126400 Rh7BG126600 Rh7BG126700 Rh7BG166200 Rh7DG118600 Rh7DG118700 Rh7DG118900 Rh7DG119000 Rh7DG119100 Rh7DG127400 Rh7DG127600 Rh7DG127700 Rh7DG127900 Rh7DG128200
rosa_wichuraiana Rw1G013270 Rw1G020790 Rw2G027890 Rw2G028040 Rw3G019240 Rw4G014070 Rw4G020540 Rw5G021320 Rw5G022970 Rw6G016920 Rw7G010020 Rw7G010040 Rw7G010580 Rw7G010590 Rw7G010600 Rw7G010610 Rw7G010620 Rw7G010630 Rw7G010640 Rw7G010690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 974
AarI CACCTGC 1 cut(s) 406
Acc36I ACCTGC 1 cut(s) 406
AccB7I CCANNNNNTGG 1 cut(s) 692
AccII CGCG 2 cut(s) 392, 725
AccIII TCCGGA 2 cut(s) 9, 1050
AciI CCGC 3 cut(s) 23, 191, 390
AclWI GGATC 3 cut(s) 648, 1244, 1257
AcoI YGGCCR 1 cut(s) 384
AcsI RAATTY 1 cut(s) 538
AcuI CTGAAG 1 cut(s) 1349
AfaI GTAC 2 cut(s) 57, 1314
AfiI CCNNNNNNNGG 2 cut(s) 155, 692
AgsI TTSAA 7 cut(s) 439, 448, 525, 779, 1139, 1285, 1384
AhdI GACNNNNNGTC 1 cut(s) 1102
AjnI CCWGG 1 cut(s) 332
AjuI GAANNNNNNNTTGG 2 cut(s) 849, 881
AleI CACNNNNGTG 2 cut(s) 984, 1068
AluBI AGCT 6 cut(s) 28, 361, 631, 941, 1217, 1292
AluI AGCT 6 cut(s) 28, 361, 631, 941, 1217, 1292
Alw21I GWGCWC 1 cut(s) 295
Alw26I GTCTC 4 cut(s) 192, 222, 280, 583
AlwI GGATC 3 cut(s) 648, 1244, 1257
AlwNI CAGNNNCTG 1 cut(s) 1217
Ama87I CYCGRG 1 cut(s) 580
Aor13HI TCCGGA 2 cut(s) 9, 1050
AoxI GGCC 5 cut(s) 229, 335, 384, 957, 1273
ApeKI GCWGC 3 cut(s) 1214, 1217, 1231
ApoI RAATTY 1 cut(s) 538
Asp700I GAANNNNTTC 1 cut(s) 45
AspLEI GCGC 1 cut(s) 394
AspS9I GGNCC 8 cut(s) 223, 230, 336, 814, 927, 957, 1053, 1274
AsuC2I CCSGG 1 cut(s) 1057
AsuHPI GGTGA 3 cut(s) 117, 158, 430
AvaI CYCGRG 1 cut(s) 580
AvaII GGWCC 4 cut(s) 223, 814, 927, 1053
BalI TGGCCA 1 cut(s) 386
BamHI GGATCC 1 cut(s) 1249
BarI GAAGNNNNNNTAC 2 cut(s) 590, 622
BbsI GAAGAC 1 cut(s) 343
Bbv12I GWGCWC 1 cut(s) 295
BbvI GCAGC 3 cut(s) 1204, 1226, 1243
BccI CCATC 5 cut(s) 158, 608, 1022, 1114, 1216
BceAI ACGGC 2 cut(s) 415, 690
BciT130I CCWGG 1 cut(s) 334
BclI TGATCA 3 cut(s) 30, 504, 799
BcnI CCSGG 1 cut(s) 1057
BcoDI GTCTC 4 cut(s) 192, 222, 280, 583
BfaI CTAG 6 cut(s) 114, 173, 593, 731, 950, 1400
BfmI CTRYAG 1 cut(s) 607
BfuAI ACCTGC 1 cut(s) 406
BisI GCNGC 3 cut(s) 1215, 1218, 1232
BlsI GCNGC 3 cut(s) 1216, 1219, 1233
BmcAI AGTACT 2 cut(s) 57, 1314
Bme1390I CCNGG 2 cut(s) 334, 1057
Bme18I GGWCC 4 cut(s) 223, 814, 927, 1053
BmeRI GACNNNNNGTC 1 cut(s) 1102
BmeT110I CYCGRG 1 cut(s) 580
BmgT120I GGNCC 8 cut(s) 223, 230, 336, 814, 927, 957, 1053, 1274
BmiI GGNNCC 2 cut(s) 928, 1251
BmrFI CCNGG 2 cut(s) 334, 1057
BmrI ACTGGG 2 cut(s) 665, 1359
BmsI GCATC 1 cut(s) 1386
BmuI ACTGGG 2 cut(s) 665, 1359
BpiI GAAGAC 1 cut(s) 343
BplI GAGNNNNNCTC 2 cut(s) 574, 606
Bpu10I CCTNAGC 1 cut(s) 294
BpuEI CTTGAG 3 cut(s) 863, 1066, 1136
BpuMI CCSGG 1 cut(s) 1057
BsaI GGTCTC 1 cut(s) 192
BsaJI CCNNGG 2 cut(s) 226, 686
BsaWI WCCGGW 2 cut(s) 9, 1050
BsaXI ACNNNNNCTCC 2 cut(s) 129, 159
Bsc4I CCNNNNNNNGG 2 cut(s) 155, 692
Bse1I ACTGG 3 cut(s) 660, 718, 1354
BseAI TCCGGA 2 cut(s) 9, 1050
BseBI CCWGG 1 cut(s) 334
BseDI CCNNGG 2 cut(s) 226, 686
BseGI GGATG 4 cut(s) 772, 1033, 1047, 1129
BseLI CCNNNNNNNGG 2 cut(s) 155, 692
BseMII CTCAG 3 cut(s) 233, 308, 957
BseNI ACTGG 3 cut(s) 660, 718, 1354
BseRI GAGGAG 3 cut(s) 233, 824, 1181
BseXI GCAGC 3 cut(s) 1204, 1226, 1243
BseYI CCCAGC 1 cut(s) 923
BsgI GTGCAG 1 cut(s) 313
Bsh1236I CGCG 2 cut(s) 392, 725
BshFI GGCC 5 cut(s) 231, 337, 386, 959, 1275
BsiHKAI GWGCWC 1 cut(s) 295
BsiHKCI CYCGRG 1 cut(s) 580
BsiSI CCGG 3 cut(s) 10, 1051, 1056
BslFI GGGAC 4 cut(s) 245, 560, 689, 940
BslI CCNNNNNNNGG 2 cut(s) 155, 692
BsmAI GTCTC 4 cut(s) 192, 222, 280, 583
BsmBI CGTCTC 2 cut(s) 280, 583
BsmFI GGGAC 4 cut(s) 245, 560, 689, 940
BsmI GAATGC 1 cut(s) 1409
BsnI GGCC 5 cut(s) 231, 337, 386, 959, 1275
Bso31I GGTCTC 1 cut(s) 192
BsoBI CYCGRG 1 cut(s) 580
Bsp1286I GDGCHC 1 cut(s) 295
Bsp13I TCCGGA 2 cut(s) 9, 1050
Bsp143I GATC 6 cut(s) 30, 300, 504, 640, 799, 1249
Bsp19I CCATGG 2 cut(s) 226, 686
BspACI CCGC 3 cut(s) 23, 191, 390
BspANI GGCC 5 cut(s) 231, 337, 386, 959, 1275
BspCNI CTCAG 3 cut(s) 232, 307, 958
BspEI TCCGGA 2 cut(s) 9, 1050
BspFNI CGCG 2 cut(s) 392, 725
BspHI TCATGA 1 cut(s) 303
BspLI GGNNCC 2 cut(s) 928, 1251
BspMI ACCTGC 1 cut(s) 406
BspPI GGATC 3 cut(s) 648, 1244, 1257
BspQI GCTCTTC 1 cut(s) 416
BspTNI GGTCTC 1 cut(s) 192
BsrI ACTGG 3 cut(s) 660, 718, 1354
BssECI CCNNGG 2 cut(s) 226, 686
BssMI GATC 6 cut(s) 30, 300, 504, 640, 799, 1249
BssT1I CCWWGG 2 cut(s) 226, 686
Bst2UI CCWGG 1 cut(s) 334
Bst4CI ACNGT 5 cut(s) 349, 473, 611, 750, 1144
Bst6I CTCTTC 4 cut(s) 416, 480, 593, 1166
BstAPI GCANNNNNTGC 1 cut(s) 290
BstC8I GCNNGC 4 cut(s) 1294, 1298, 1302, 1325
BstDEI CTNAG 3 cut(s) 219, 294, 966
BstDSI CCRYGG 2 cut(s) 226, 686
BstF5I GGATG 4 cut(s) 772, 1033, 1047, 1129
BstFNI CGCG 2 cut(s) 392, 725
BstHHI GCGC 1 cut(s) 394
BstKTI GATC 6 cut(s) 33, 303, 507, 643, 802, 1252
BstMAI GTCTC 4 cut(s) 192, 222, 280, 583
BstMBI GATC 6 cut(s) 30, 300, 504, 640, 799, 1249
BstMWI GCNNNNNNNGC 3 cut(s) 209, 290, 559
BstNI CCWGG 1 cut(s) 334
BstNSI RCATGY 2 cut(s) 553, 1300
BstSCI CCNGG 2 cut(s) 332, 1055
BstSFI CTRYAG 1 cut(s) 607
BstUI CGCG 2 cut(s) 392, 725
BstV1I GCAGC 3 cut(s) 1204, 1226, 1243
BstV2I GAAGAC 1 cut(s) 343
BstX2I RGATCY 1 cut(s) 1249
BstYI RGATCY 1 cut(s) 1249
BsuRI GGCC 5 cut(s) 231, 337, 386, 959, 1275
BtgI CCRYGG 2 cut(s) 226, 686
BtgZI GCGATG 1 cut(s) 1235
BtsCI GGATG 4 cut(s) 772, 1033, 1047, 1129
BtsIMutI CAGTG 2 cut(s) 616, 711
BveI ACCTGC 1 cut(s) 406
Cac8I GCNNGC 4 cut(s) 1294, 1298, 1302, 1325
CaiI CAGNNNCTG 1 cut(s) 1217
CciI TCATGA 1 cut(s) 303
CfoI GCGC 1 cut(s) 394
Cfr13I GGNCC 8 cut(s) 223, 230, 336, 814, 927, 957, 1053, 1274
CpoI CGGWCCG 1 cut(s) 1053
CseI GACGC 3 cut(s) 247, 568, 731
Csp6I GTAC 2 cut(s) 56, 1313
CspCI CAANNNNNGTGG 2 cut(s) 363, 398
CspI CGGWCCG 1 cut(s) 1053
CviQI GTAC 2 cut(s) 56, 1313
DdeI CTNAG 3 cut(s) 219, 294, 966
DpnI GATC 6 cut(s) 32, 302, 506, 642, 801, 1251
DpnII GATC 6 cut(s) 30, 300, 504, 640, 799, 1249
DraI TTTAAA 1 cut(s) 625
DriI GACNNNNNGTC 1 cut(s) 1102
EaeI YGGCCR 1 cut(s) 384
Eam1104I CTCTTC 4 cut(s) 416, 480, 593, 1166
Eam1105I GACNNNNNGTC 1 cut(s) 1102
EarI CTCTTC 4 cut(s) 416, 480, 593, 1166
EciI GGCGGA 2 cut(s) 38, 180
Eco130I CCWWGG 2 cut(s) 226, 686
Eco31I GGTCTC 1 cut(s) 192
Eco32I GATATC 1 cut(s) 1339
Eco47I GGWCC 4 cut(s) 223, 814, 927, 1053
Eco57I CTGAAG 1 cut(s) 1349
Eco88I CYCGRG 1 cut(s) 580
EcoRII CCWGG 1 cut(s) 332
EcoRV GATATC 1 cut(s) 1339
EcoT14I CCWWGG 2 cut(s) 226, 686
ErhI CCWWGG 2 cut(s) 226, 686
Esp3I CGTCTC 2 cut(s) 280, 583
FaqI GGGAC 4 cut(s) 245, 560, 689, 940
FauNDI CATATG 2 cut(s) 428, 786
FbaI TGATCA 3 cut(s) 30, 504, 799
Fnu4HI GCNGC 3 cut(s) 1215, 1218, 1232
FokI GGATG 4 cut(s) 779, 1034, 1040, 1136
Fsp4HI GCNGC 3 cut(s) 1215, 1218, 1232
FspBI CTAG 6 cut(s) 114, 173, 593, 731, 950, 1400
GlaI GCGC 1 cut(s) 393
GluI GCNGC 3 cut(s) 1215, 1218, 1232
GsaI CCCAGC 1 cut(s) 927
HaeIII GGCC 5 cut(s) 231, 337, 386, 959, 1275
HapII CCGG 3 cut(s) 10, 1051, 1056
HgaI GACGC 3 cut(s) 247, 568, 731
HhaI GCGC 1 cut(s) 394
Hin6I GCGC 1 cut(s) 392
HinP1I GCGC 1 cut(s) 392
HindIII AAGCTT 1 cut(s) 359
HinfI GANTC 5 cut(s) 4, 439, 521, 847, 1241
HpaII CCGG 3 cut(s) 10, 1051, 1056
HphI GGTGA 3 cut(s) 117, 158, 430
Hpy166II GTNNAC 1 cut(s) 345
Hpy8I GTNNAC 1 cut(s) 345
Hpy99I CGWCG 2 cut(s) 275, 1249
HpyAV CCTTC 5 cut(s) 56, 141, 799, 847, 1287
HpyCH4III ACNGT 5 cut(s) 349, 473, 611, 750, 1144
HpyCH4IV ACGT 1 cut(s) 834
HpyCH4V TGCA 3 cut(s) 330, 1003, 1036
HpyF10VI GCNNNNNNNGC 3 cut(s) 209, 290, 559
HpyF3I CTNAG 3 cut(s) 219, 294, 966
HpySE526I ACGT 1 cut(s) 834
HspAI GCGC 1 cut(s) 392
Kpn2I TCCGGA 2 cut(s) 9, 1050
Ksp22I TGATCA 3 cut(s) 30, 504, 799
Kzo9I GATC 6 cut(s) 30, 300, 504, 640, 799, 1249
LguI GCTCTTC 1 cut(s) 416
LmnI GCTCC 2 cut(s) 25, 246
Lsp1109I GCAGC 3 cut(s) 1204, 1226, 1243
LweI GCATC 1 cut(s) 1386
MaeI CTAG 6 cut(s) 114, 173, 593, 731, 950, 1400
MaeII ACGT 1 cut(s) 834
MaeIII GTNAC 4 cut(s) 602, 651, 709, 1144
MalI GATC 6 cut(s) 32, 302, 506, 642, 801, 1251
MboI GATC 6 cut(s) 30, 300, 504, 640, 799, 1249
MboII GAAGA 8 cut(s) 64, 155, 343, 433, 497, 610, 1183, 1396
MflI RGATCY 1 cut(s) 1249
MhlI GDGCHC 1 cut(s) 295
MlsI TGGCCA 1 cut(s) 386
MluCI AATT 5 cut(s) 322, 538, 774, 998, 1379
MluNI TGGCCA 1 cut(s) 386
MmeI TCCRAC 2 cut(s) 1086, 1227
Mox20I TGGCCA 1 cut(s) 386
MroI TCCGGA 2 cut(s) 9, 1050
MroXI GAANNNNTTC 1 cut(s) 45
MscI TGGCCA 1 cut(s) 386
MseI TTAA 4 cut(s) 624, 894, 1359, 1414
MslI CAYNNNNRTG 5 cut(s) 431, 554, 984, 1019, 1068
Msp20I TGGCCA 1 cut(s) 386
MspA1I CMGCKG 1 cut(s) 1217
MspI CCGG 3 cut(s) 10, 1051, 1056
MspR9I CCNGG 2 cut(s) 334, 1057
Mva1269I GAATGC 1 cut(s) 1409
MvaI CCWGG 1 cut(s) 334
MvnI CGCG 2 cut(s) 392, 725
MwoI GCNNNNNNNGC 3 cut(s) 209, 290, 559
NciI CCSGG 1 cut(s) 1057
NcoI CCATGG 2 cut(s) 226, 686
NdeI CATATG 2 cut(s) 428, 786
NdeII GATC 6 cut(s) 30, 300, 504, 640, 799, 1249
NlaIV GGNNCC 2 cut(s) 928, 1251
NmuCI GTSAC 1 cut(s) 709
NspI RCATGY 2 cut(s) 553, 1300
OliI CACNNNNGTG 2 cut(s) 984, 1068
PaeI GCATGC 1 cut(s) 1300
PaeR7I CTCGAG 1 cut(s) 580
PagI TCATGA 1 cut(s) 303
PaqCI CACCTGC 1 cut(s) 406
PciSI GCTCTTC 1 cut(s) 416
PctI GAATGC 1 cut(s) 1409
PdmI GAANNNNTTC 1 cut(s) 45
PfeI GAWTC 5 cut(s) 4, 439, 521, 847, 1241
PflMI CCANNNNNTGG 1 cut(s) 692
PkrI GCNGC 3 cut(s) 1216, 1219, 1233
PsiI TTATAA 1 cut(s) 974
Psp6I CCWGG 1 cut(s) 332
PspFI CCCAGC 1 cut(s) 923
PspGI CCWGG 1 cut(s) 332
PspN4I GGNNCC 2 cut(s) 928, 1251
PspPI GGNCC 8 cut(s) 223, 230, 336, 814, 927, 957, 1053, 1274
PstNI CAGNNNCTG 1 cut(s) 1217
PsuI RGATCY 1 cut(s) 1249
PvuII CAGCTG 1 cut(s) 1217
RsaI GTAC 2 cut(s) 57, 1314
RsaNI GTAC 2 cut(s) 56, 1313
RseI CAYNNNNRTG 5 cut(s) 431, 554, 984, 1019, 1068
Rsr2I CGGWCCG 1 cut(s) 1053
RsrII CGGWCCG 1 cut(s) 1053
SapI GCTCTTC 1 cut(s) 416
SaqAI TTAA 4 cut(s) 624, 894, 1359, 1414
SatI GCNGC 3 cut(s) 1215, 1218, 1232
Sau3AI GATC 6 cut(s) 30, 300, 504, 640, 799, 1249
Sau96I GGNCC 8 cut(s) 223, 230, 336, 814, 927, 957, 1053, 1274
ScaI AGTACT 2 cut(s) 57, 1314
ScrFI CCNGG 2 cut(s) 334, 1057
SduI GDGCHC 1 cut(s) 295
SfaNI GCATC 1 cut(s) 1386
SfcI CTRYAG 1 cut(s) 607
Sfr274I CTCGAG 1 cut(s) 580
SinI GGWCC 4 cut(s) 223, 814, 927, 1053
SlaI CTCGAG 1 cut(s) 580
SmiMI CAYNNNNRTG 5 cut(s) 431, 554, 984, 1019, 1068
SmlI CTYRAG 4 cut(s) 580, 842, 1081, 1115
SmoI CTYRAG 4 cut(s) 580, 842, 1081, 1115
SphI GCATGC 1 cut(s) 1300
Sse9I AATT 5 cut(s) 322, 538, 774, 998, 1379
SsiI CCGC 3 cut(s) 23, 191, 390
SspMI CTAG 6 cut(s) 114, 173, 593, 731, 950, 1400
StyD4I CCNGG 2 cut(s) 332, 1055
StyI CCWWGG 2 cut(s) 226, 686
TaaI ACNGT 5 cut(s) 349, 473, 611, 750, 1144
TaiI ACGT 1 cut(s) 837
TaqI TCGA 1 cut(s) 581
TaqII GACCGA 2 cut(s) 453, 944
TasI AATT 5 cut(s) 322, 538, 774, 998, 1379
TatI WGTACW 2 cut(s) 55, 1312
TfiI GAWTC 5 cut(s) 4, 439, 521, 847, 1241
Tru1I TTAA 4 cut(s) 624, 894, 1359, 1414
Tru9I TTAA 4 cut(s) 624, 894, 1359, 1414
TscAI CASTG 2 cut(s) 616, 718
TseFI GTSAC 1 cut(s) 709
TseI GCWGC 3 cut(s) 1214, 1217, 1231
Tsp45I GTSAC 1 cut(s) 709
TspDTI ATGAA 6 cut(s) 17, 54, 64, 320, 1023, 1178
TspGWI ACGGA 2 cut(s) 662, 1178
TspRI CASTG 2 cut(s) 616, 718
Van91I CCANNNNNTGG 1 cut(s) 692
VpaK11BI GGWCC 4 cut(s) 223, 814, 927, 1053
XapI RAATTY 1 cut(s) 538
XbaI TCTAGA 1 cut(s) 949
XceI RCATGY 2 cut(s) 553, 1300
XcmI CCANNNNNNNNNTGG 2 cut(s) 693, 1021
XhoI CTCGAG 1 cut(s) 580
XmnI GAANNNNTTC 1 cut(s) 45
XspI CTAG 6 cut(s) 114, 173, 593, 731, 950, 1400
ZrmI AGTACT 2 cut(s) 57, 1314
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.