Rh4DG163600

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
Physical Location & Seq
Forward (+)
32476935 .. 32483812
6878 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG163600.1

Sequence Viewer

Length: 1275 bp
ATGATAGAGCTGACCCATAAAACCTCCCTGTTGATGGAATATTATTTCACCCTCACATTAGTACTTTGTCTGCCCCCCATTTTCTTCGTTCTCTTTCGCAGATTGTCCTCCGTTAATACCAAAAATCAACCACCTTCTCCACCAAAGCTTCCTTTCCTTGGGAACCTTCACCAACTAGACTCACATCCTCATCGCTCACTTCAAACCTTAGCTCATCGGCATGGCCCCCTCATGCTCCTCCATTTCGGAAGTGTCCCAGTCCTCGTTGTCTCCTCGGCTGAGGCTGCGCGTGAGGTCTTGAAAACACATGATCTCACATTCGCCAGCAGACCAACGTCCACCGTCTTTAAGAAGCTTTTCTACAATTGCAAAGACATGGCGTCTGCACCTTATGGTGAGTATTGGAAGCAGTTGAGGAGTATATGTGTTTCAAATCTTTTAAGCACCAAAATGGTTCGCTCTTTTCGTGCCGTGAGAGAAGAGGAAACAAAATTCATGATCTCCGGGATAGAACAATCATGTATGTCCTCCTCTTCAAAGTCATCAGTCGTGAATTTAAGAGAAAAGCTTGTGACGCTTACTATTGACGTCACCTGTAGAGTGACTACGGGGAGGAAGTACAATAGCATCGTTGGGGAAGATGGTAAAATAGTATTGTTTAAGGATCTTTTAGGGGAGTTTATTGAGTTATTAGGAGGCATCTACATCGGAGATTATATCCCATGGCTGGCTTGGTTAACTCGTGTCCATGGTTTGGACTCTAAATTAGACAAGGTGGCTAAACAGTTTGATGACCTTTTAGATAGAGTGATTCAAGATCATATCGAGCAACGTTCCAAGAGTGGAAACATTAAAGGGAATATGAATCATACGAATGATCAGGACGAGAATGGCCAAAAGGACTTCGTGGACGTTTTACTTGGGATTCAAGAAGAGAGCTCATCATCAACTGGTTTCCCTATTGATAGAGTCACCGTGAAGGCTCTCATCATGGACATGTTTTCGGCTGCCACTGATACATCGTATACACTTCTAGAGTGGACAATGGCAGAGCTTTTAAGACATCCAAGAGATGTTGGATTCCTTTTCTATCAGATCACTGTCACAGTTAAAGAGAAACATCGTATTTCAAAGTCAAGGGCAAAAGTAAGAAATCAGTTCACTTATGTTCCTATGTTATTTATTGCATATCTGATAATGATATTATATACCATTCAGTTCTACCTACATCTCCAAGTGCATCAATGCGGTTATGCGGACATCGTCCATACTTAG

Protein Analysis

424

Amino Acids

48.44

Weight (kDa)

8.83

Isoelectric Point (pI)

41.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 44 - 357 4.7e-38 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000061)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G48270 AT3G48280 AT3G48290 AT3G48290 AT3G48300 AT3G48300 AT3G48310 AT3G48320 AT4G20235 AT4G20235
fragaria_vesca FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g36190 FvH4_3g14160 FvH4_3g14210 FvH4_3g14260 FvH4_3g14260 FvH4_3g21100 FvH4_3g21380 FvH4_4g24460 FvH4_4g24500 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06572 FvH4_5g06573 FvH4_5g06574 FvH4_5g06575 FvH4_5g06576 FvH4_5g06577 FvH4_5g06577 FvH4_5g07540 FvH4_5g07550 FvH4_5g07560 FvH4_5g07570 FvH4_5g29491 FvH4_5g29492 FvH4_6g23870 FvH4_6g23880 FvH4_6g26870 FvH4_7g11861 FvH4_7g11862 FvH4_7g13050 FvH4_7g13060 FvH4_7g13080 FvH4_7g13080 FvH4_7g22630 FvH4_7g22650 FvH4_7g22651 FvH4_7g23020
malus_domestica MD03G1207400.v1.1 MD03G1214800.v1.1 MD03G1218500.v1.1 MD06G1163100.v1.1 MD06G1163300.v1.1 MD06G1163400.v1.1 MD06G1163500.v1.1 MD06G1163600.v1.1 MD06G1163800.v1.1 MD06G1164000.v1.1 MD06G1164100.v1.1 MD06G1224400.v1.1 MD08G1222800.v1.1 MD08G1222900.v1.1 MD08G1223100.v1.1 MD11G1091500.v1.1 MD11G1091800.v1.1 MD14G1163200.v1.1 MD14G1169000.v1.1 MD15G1207200.v1.1 MD15G1207300.v1.1 MD17G1259400.v1.1
prunus_persica Prupe.4G198100_v2.0.a1 Prupe.4G199100_v2.0.a1 Prupe.4G199400_v2.0.a1 Prupe.4G199800_v2.0.a1 Prupe.4G225200_v2.0.a1 Prupe.4G239100_v2.0.a1 Prupe.5G156600_v2.0.a1 Prupe.5G163500_v2.0.a1 Prupe.7G209500_v2.0.a1 Prupe.I003400_v2.0.a1
pyrus_communis pycom03g16340 pycom06g14600 pycom06g14610 pycom06g14620 pycom06g14630 pycom06g14640 pycom06g14670 pycom06g14690 pycom08g19390 pycom08g19400 pycom08g19410 pycom11g07600 pycom11g07610 pycom11g07620 pycom11g07660 pycom14g13580 pycom14g14080 pycom14g14100 pycom14g14110 pycom15g18380 pycom17g26080
rosa_chinensis RchiOBHm_Chr1g0339441 RchiOBHm_Chr1g0339451 RchiOBHm_Chr1g0352191 RchiOBHm_Chr1g0368221 RchiOBHm_Chr2g0129531 RchiOBHm_Chr2g0129541 RchiOBHm_Chr3g0477631 RchiOBHm_Chr3g0482551 RchiOBHm_Chr3g0482561 RchiOBHm_Chr3g0482571 RchiOBHm_Chr4g0411601 RchiOBHm_Chr4g0422181 RchiOBHm_Chr5g0036661 RchiOBHm_Chr5g0036731 RchiOBHm_Chr6g0274021 RchiOBHm_Chr7g0190921 RchiOBHm_Chr7g0190931 RchiOBHm_Chr7g0190941 RchiOBHm_Chr7g0190951 RchiOBHm_Chr7g0190961 RchiOBHm_Chr7g0190971 RchiOBHm_Chr7g0191001 RchiOBHm_Chr7g0191011 RchiOBHm_Chr7g0191021 RchiOBHm_Chr7g0192181 RchiOBHm_Chr7g0192191 RchiOBHm_Chr7g0192201 RchiOBHm_Chr7g0192221 RchiOBHm_Chr7g0192231 RchiOBHm_Chr7g0192281 RchiOBHm_Chr7g0197311
rosa_laevigata RLG00000003942 RLG00000004345 RLG00000004379 RLG00000004383 RLG00000004384 RLG00000004385 RLG00000004387 RLG00000004388 RLG00000004389 RLG00000004480 RLG00000004481 RLG00000004482 RLG00000004483 RLG00000004485 RLG00000008342 RLG00000008401 RLG00000013583 RLG00000017044 RLG00000027229 RLG00000028349 RLG00000028350 RLG00000028353 RLG00000028820 RLG00000033707 RLG00000033710
rosa_multiflora Rmu_co8020340.1_g000001 Rmu_co8096640.1_g000001 Rmu_co8214930.1_g000001 Rmu_co8223272.1_g000001 Rmu_co8282535.1_g000001 Rmu_co8343567.1_g000001 Rmu_co8404191.1_g000001 Rmu_co8455157.1_g000001 Rmu_sc0000062.1_g000028 Rmu_sc0000082.1_g000091 Rmu_sc0000509.1_g000017 Rmu_sc0000775.1_g000001 Rmu_sc0000999.1_g000034 Rmu_sc0001559.1_g000004 Rmu_sc0001559.1_g000009 Rmu_sc0002164.1_g000001 Rmu_sc0002164.1_g000005 Rmu_sc0002164.1_g000007 Rmu_sc0002164.1_g000008 Rmu_sc0002164.1_g000009 Rmu_sc0002164.1_g000019 Rmu_sc0002247.1_g000009 Rmu_sc0002373.1_g000002 Rmu_sc0002373.1_g000003 Rmu_sc0002944.1_g000059 Rmu_sc0003930.1_g000004 Rmu_sc0004958.1_g000001 Rmu_sc0005197.1_g000014 Rmu_sc0005898.1_g000008 Rmu_sc0005898.1_g000009 Rmu_sc0005898.1_g000015 Rmu_sc0006059.1_g000004 Rmu_sc0006059.1_g000010 Rmu_sc0006903.1_g000007 Rmu_sc0006903.1_g000008 Rmu_sc0006968.1_g000001 Rmu_sc0011009.1_g000009 Rmu_sc0022852.1_g000002 Rmu_sc0033854.1_g000001 Rmu_ssc0000421.1_g000057 Rmu_ssc0000421.1_g000067 Rmu_ssc0000421.1_g000069 Rmu_ssc0000421.1_g000072 Rmu_ssc0000421.1_g000081 Rmu_ssc0000421.1_g000086
rosa_roxburghii Rroxscaffold_158G00443680 Rroxscaffold_158G00443710 Rroxscaffold_158G00443720 Rroxscaffold_158G00443740 Rroxscaffold_1G00034950 Rroxscaffold_1G00044240 Rroxscaffold_1G00044270 Rroxscaffold_3G00241380 Rroxscaffold_3G00247000 Rroxscaffold_3G00263120 Rroxscaffold_3G00263150 Rroxscaffold_3G00263160 Rroxscaffold_3G00263170 Rroxscaffold_3G00263180 Rroxscaffold_3G00263190 Rroxscaffold_3G00263210 Rroxscaffold_3G00263230 Rroxscaffold_3G00263260 Rroxscaffold_3G00264110 Rroxscaffold_3G00264130 Rroxscaffold_3G00264160 Rroxscaffold_3G00264180 Rroxscaffold_3G00264200 Rroxscaffold_4G00288750 Rroxscaffold_4G00303110 Rroxscaffold_4G00303120 Rroxscaffold_4G00322280 Rroxscaffold_5G00356200 Rroxscaffold_6G00399150 Rroxscaffold_6G00399290 Rroxscaffold_7G00194770
rosa_rugosa Rorug01G0225300 Rorug01G0225400 Rorug01G0225800 Rorug01G0226000 Rorug01G0339400 Rorug01G0451500 Rorug03G0196900 Rorug03G0294900 Rorug04G0107500 Rorug04G0107600 Rorug04G0129700 Rorug04G0178000 Rorug05G0144900.1 Rorug05G0145000 Rorug05G0228000 Rorug05G0228600 Rorug06G0078300 Rorug06G0508000 Rorug06G0508100 Rorug06G0508100 Rorug06G0508400 Rorug06G0513400 Rorug07G0000100 Rorug07G0000200 Rorug07G0000300 Rorug07G0000500 Rorug07G0000800
rosa_samantha Rh1BG060400 Rh1BG210300 Rh1BG210700 Rh1BG210800 Rh1BG309800 Rh1CG223800 Rh1CG224200 Rh1CG325200 Rh1DG237000 Rh1DG237400 Rh1DG341600 Rh2DG365700 Rh3AG212500 Rh3AG248400 Rh3CG239800 Rh3DG239300 Rh4AG169300 Rh4BG166200 Rh4BG240500 Rh4BG240600 Rh4DG163600 Rh5AG249600 Rh5AG249900 Rh5AG250000 Rh5CG283100 Rh5CG283200 Rh5CG283400 Rh5DG259200 Rh5DG259800 Rh6BG197700 Rh6CG197800 Rh6DG189400 Rh7AG114900 Rh7AG115000 Rh7AG115200 Rh7AG115300 Rh7AG115400 Rh7AG115500 Rh7AG123900 Rh7AG124100 Rh7AG124300 Rh7BG117200 Rh7BG117400 Rh7BG118400 Rh7BG125400 Rh7BG125600 Rh7BG125700 Rh7BG125800 Rh7BG125900 Rh7BG126000 Rh7BG126400 Rh7BG126600 Rh7BG126700 Rh7BG166200 Rh7DG118600 Rh7DG118700 Rh7DG118900 Rh7DG119000 Rh7DG119100 Rh7DG127400 Rh7DG127600 Rh7DG127700 Rh7DG127900 Rh7DG128200
rosa_wichuraiana Rw1G013270 Rw1G020790 Rw2G027890 Rw2G028040 Rw3G019240 Rw4G014070 Rw4G020540 Rw5G021320 Rw5G022970 Rw6G016920 Rw7G010020 Rw7G010040 Rw7G010580 Rw7G010590 Rw7G010600 Rw7G010610 Rw7G010620 Rw7G010630 Rw7G010640 Rw7G010690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 591
AccB7I CCANNNNNTGG 1 cut(s) 754
AccI GTMKAC 1 cut(s) 1025
AccII CGCG 1 cut(s) 289
AciI CCGC 2 cut(s) 1248, 1256
AclI AACGTT 1 cut(s) 832
AclWI GGATC 1 cut(s) 672
AcoI YGGCCR 1 cut(s) 892
AcsI RAATTY 2 cut(s) 491, 553
AcyI GRCGYC 2 cut(s) 380, 588
AfaI GTAC 2 cut(s) 63, 620
AfiI CCNNNNNNNGG 4 cut(s) 34, 158, 727, 754
AflIII ACRYGT 1 cut(s) 996
AgsI TTSAA 7 cut(s) 203, 301, 432, 537, 815, 929, 1131
AhdI GACNNNNNGTC 1 cut(s) 379
AluBI AGCT 7 cut(s) 10, 148, 212, 355, 568, 939, 1054
AluI AGCT 7 cut(s) 10, 148, 212, 355, 568, 939, 1054
Alw21I GWGCWC 1 cut(s) 941
Alw26I GTCTC 1 cut(s) 274
AlwI GGATC 1 cut(s) 672
AoxI GGCC 2 cut(s) 223, 892
ApeKI GCWGC 2 cut(s) 284, 1007
ApoI RAATTY 2 cut(s) 491, 553
Asp700I GAANNNNTTC 1 cut(s) 356
AspLEI GCGC 1 cut(s) 289
AspS9I GGNCC 1 cut(s) 224
AsuC2I CCSGG 1 cut(s) 505
AsuHPI GGTGA 5 cut(s) 40, 161, 407, 583, 964
BalI TGGCCA 1 cut(s) 894
BanII GRGCYC 1 cut(s) 941
BarI GAAGNNNNNNTAC 2 cut(s) 344, 376
BauI CACGAG 1 cut(s) 741
Bbv12I GWGCWC 1 cut(s) 941
BbvCI CCTCAGC 1 cut(s) 279
BbvI GCAGC 2 cut(s) 271, 994
BccI CCATC 2 cut(s) 28, 635
BceAI ACGGC 1 cut(s) 455
BcgI CGANNNNNNTGC 2 cut(s) 688, 722
BclI TGATCA 1 cut(s) 877
BcnI CCSGG 1 cut(s) 505
BcoDI GTCTC 1 cut(s) 274
BfaI CTAG 2 cut(s) 176, 1034
BfmI CTRYAG 1 cut(s) 595
BisI GCNGC 2 cut(s) 285, 1008
BlsI GCNGC 2 cut(s) 286, 1009
BmcAI AGTACT 1 cut(s) 63
Bme1390I CCNGG 1 cut(s) 505
BmeRI GACNNNNNGTC 1 cut(s) 379
BmgT120I GGNCC 1 cut(s) 224
BmiI GGNNCC 2 cut(s) 164, 226
BmrFI CCNGG 1 cut(s) 505
BmrI ACTGGG 1 cut(s) 251
BmsI GCATC 3 cut(s) 636, 708, 1249
BmuI ACTGGG 1 cut(s) 251
BoxI GACNNNNGTC 1 cut(s) 334
Bpu10I CCTNAGC 2 cut(s) 208, 279
BpuMI CCSGG 1 cut(s) 505
BsaHI GRCGYC 2 cut(s) 380, 588
BsaJI CCNNGG 4 cut(s) 157, 273, 722, 748
BsaXI ACNNNNNCTCC 2 cut(s) 409, 439
Bsc4I CCNNNNNNNGG 4 cut(s) 34, 158, 727, 754
Bse1I ACTGG 2 cut(s) 257, 955
BseDI CCNNGG 4 cut(s) 157, 273, 722, 748
BseGI GGATG 2 cut(s) 184, 1063
BseLI CCNNNNNNNGG 4 cut(s) 34, 158, 727, 754
BseMII CTCAG 1 cut(s) 270
BseNI ACTGG 2 cut(s) 257, 955
BseRI GAGGAG 4 cut(s) 227, 262, 430, 520
BseXI GCAGC 2 cut(s) 271, 994
BsgI GTGCAG 1 cut(s) 369
Bsh1236I CGCG 1 cut(s) 289
BshFI GGCC 2 cut(s) 225, 894
BsiHKAI GWGCWC 1 cut(s) 941
BsiSI CCGG 1 cut(s) 504
BslFI GGGAC 1 cut(s) 239
BslI CCNNNNNNNGG 4 cut(s) 34, 158, 727, 754
BsmAI GTCTC 1 cut(s) 274
BsmFI GGGAC 1 cut(s) 239
BsnI GGCC 2 cut(s) 225, 894
Bsp1286I GDGCHC 1 cut(s) 941
Bsp143I GATC 6 cut(s) 310, 498, 664, 817, 877, 1095
Bsp19I CCATGG 2 cut(s) 722, 748
BspACI CCGC 2 cut(s) 1248, 1256
BspANI GGCC 2 cut(s) 225, 894
BspCNI CTCAG 1 cut(s) 271
BspFNI CGCG 1 cut(s) 289
BspHI TCATGA 1 cut(s) 495
BspLI GGNNCC 2 cut(s) 164, 226
BspPI GGATC 1 cut(s) 672
BsrI ACTGG 2 cut(s) 257, 955
BssECI CCNNGG 4 cut(s) 157, 273, 722, 748
BssMI GATC 6 cut(s) 310, 498, 664, 817, 877, 1095
BssNAI GTATAC 1 cut(s) 1026
BssNI GRCGYC 2 cut(s) 380, 588
BssSI CACGAG 1 cut(s) 741
BssT1I CCWWGG 3 cut(s) 157, 722, 748
Bst1107I GTATAC 1 cut(s) 1026
Bst2BI CACGAG 1 cut(s) 741
Bst4CI ACNGT 5 cut(s) 343, 786, 976, 1102, 1108
Bst6I CTCTTC 3 cut(s) 474, 538, 927
BstACI GRCGYC 2 cut(s) 380, 588
BstC8I GCNNGC 2 cut(s) 325, 729
BstDEI CTNAG 3 cut(s) 208, 279, 1272
BstDSI CCRYGG 2 cut(s) 722, 748
BstF5I GGATG 2 cut(s) 184, 1063
BstFNI CGCG 1 cut(s) 289
BstHHI GCGC 1 cut(s) 289
BstKTI GATC 6 cut(s) 313, 501, 667, 820, 880, 1098
BstMAI GTCTC 1 cut(s) 274
BstMBI GATC 6 cut(s) 310, 498, 664, 817, 877, 1095
BstMWI GCNNNNNNNGC 2 cut(s) 284, 574
BstNSI RCATGY 1 cut(s) 1000
BstPAI GACNNNNGTC 1 cut(s) 334
BstSCI CCNGG 1 cut(s) 503
BstSFI CTRYAG 1 cut(s) 595
BstUI CGCG 1 cut(s) 289
BstV1I GCAGC 2 cut(s) 271, 994
BstX2I RGATCY 1 cut(s) 664
BstYI RGATCY 1 cut(s) 664
BstZ17I GTATAC 1 cut(s) 1026
BsuRI GGCC 2 cut(s) 225, 894
BtgI CCRYGG 2 cut(s) 722, 748
BtgZI GCGATG 1 cut(s) 176
BtsCI GGATG 2 cut(s) 184, 1063
BtsIMutI CAGTG 2 cut(s) 1011, 1098
Cac8I GCNNGC 2 cut(s) 325, 729
CciI TCATGA 1 cut(s) 495
CfoI GCGC 1 cut(s) 289
Cfr13I GGNCC 1 cut(s) 224
CseI GACGC 2 cut(s) 369, 583
Csp6I GTAC 2 cut(s) 62, 619
CviQI GTAC 2 cut(s) 62, 619
DdeI CTNAG 3 cut(s) 208, 279, 1272
DpnI GATC 6 cut(s) 312, 500, 666, 819, 879, 1097
DpnII GATC 6 cut(s) 310, 498, 664, 817, 877, 1095
DriI GACNNNNNGTC 1 cut(s) 379
EaeI YGGCCR 1 cut(s) 892
Eam1104I CTCTTC 3 cut(s) 474, 538, 927
Eam1105I GACNNNNNGTC 1 cut(s) 379
EarI CTCTTC 3 cut(s) 474, 538, 927
Ecl136II GAGCTC 1 cut(s) 939
Eco130I CCWWGG 3 cut(s) 157, 722, 748
Eco24I GRGCYC 1 cut(s) 941
Eco53kI GAGCTC 1 cut(s) 939
EcoICRI GAGCTC 1 cut(s) 939
EcoT14I CCWWGG 3 cut(s) 157, 722, 748
EcoT38I GRGCYC 1 cut(s) 941
ErhI CCWWGG 3 cut(s) 157, 722, 748
FaqI GGGAC 1 cut(s) 239
FbaI TGATCA 1 cut(s) 877
FblI GTMKAC 1 cut(s) 1025
Fnu4HI GCNGC 2 cut(s) 285, 1008
FokI GGATG 2 cut(s) 171, 1050
FriOI GRGCYC 1 cut(s) 941
Fsp4HI GCNGC 2 cut(s) 285, 1008
FspBI CTAG 2 cut(s) 176, 1034
GlaI GCGC 1 cut(s) 288
GluI GCNGC 2 cut(s) 285, 1008
HaeIII GGCC 2 cut(s) 225, 894
HapII CCGG 1 cut(s) 504
HgaI GACGC 2 cut(s) 369, 583
HhaI GCGC 1 cut(s) 289
Hin1I GRCGYC 2 cut(s) 380, 588
Hin6I GCGC 1 cut(s) 287
HinP1I GCGC 1 cut(s) 287
HincII GTYRAC 1 cut(s) 738
HindII GTYRAC 1 cut(s) 738
HindIII AAGCTT 3 cut(s) 146, 353, 566
HinfI GANTC 7 cut(s) 179, 758, 811, 865, 925, 969, 1080
HpaI GTTAAC 1 cut(s) 738
HpaII CCGG 1 cut(s) 504
HphI GGTGA 5 cut(s) 40, 161, 407, 583, 964
Hpy166II GTNNAC 6 cut(s) 339, 738, 910, 1026, 1041, 1161
Hpy188I TCNGA 4 cut(s) 248, 710, 1095, 1194
Hpy188III TCNNGA 7 cut(s) 298, 496, 550, 815, 881, 929, 1034
Hpy8I GTNNAC 6 cut(s) 339, 738, 910, 1026, 1041, 1161
HpyAV CCTTC 3 cut(s) 144, 176, 973
HpyCH4III ACNGT 5 cut(s) 343, 786, 976, 1102, 1108
HpyCH4IV ACGT 4 cut(s) 335, 588, 832, 912
HpyCH4V TGCA 4 cut(s) 369, 386, 1187, 1240
HpyF10VI GCNNNNNNNGC 2 cut(s) 284, 574
HpyF3I CTNAG 3 cut(s) 208, 279, 1272
HpySE526I ACGT 4 cut(s) 335, 588, 832, 912
Hsp92I GRCGYC 2 cut(s) 380, 588
HspAI GCGC 1 cut(s) 287
Ksp22I TGATCA 1 cut(s) 877
KspAI GTTAAC 1 cut(s) 738
Kzo9I GATC 6 cut(s) 310, 498, 664, 817, 877, 1095
LmnI GCTCC 1 cut(s) 240
LpnPI CCDG 8 cut(s) 41, 270, 337, 517, 607, 713, 866, 936
Lsp1109I GCAGC 2 cut(s) 271, 994
LweI GCATC 3 cut(s) 636, 708, 1249
MaeI CTAG 2 cut(s) 176, 1034
MaeII ACGT 4 cut(s) 335, 588, 832, 912
MaeIII GTNAC 5 cut(s) 571, 589, 601, 970, 1102
MalI GATC 6 cut(s) 312, 500, 666, 819, 879, 1097
MboI GATC 6 cut(s) 310, 498, 664, 817, 877, 1095
MboII GAAGA 5 cut(s) 76, 491, 525, 650, 944
MfeI CAATTG 1 cut(s) 364
MflI RGATCY 1 cut(s) 664
MhlI GDGCHC 1 cut(s) 941
MlsI TGGCCA 1 cut(s) 894
MluCI AATT 4 cut(s) 364, 491, 553, 764
MluNI TGGCCA 1 cut(s) 894
MlyI GAGTC 3 cut(s) 173, 752, 978
MmeI TCCRAC 1 cut(s) 1057
Mox20I TGGCCA 1 cut(s) 894
MroXI GAANNNNTTC 1 cut(s) 356
MscI TGGCCA 1 cut(s) 894
MseI TTAA 9 cut(s) 114, 348, 440, 557, 660, 737, 852, 1058, 1110
MslI CAYNNNNRTG 4 cut(s) 219, 449, 873, 995
Msp20I TGGCCA 1 cut(s) 894
MspI CCGG 1 cut(s) 504
MspR9I CCNGG 1 cut(s) 505
MunI CAATTG 1 cut(s) 364
MvnI CGCG 1 cut(s) 289
MwoI GCNNNNNNNGC 2 cut(s) 284, 574
NciI CCSGG 1 cut(s) 505
NcoI CCATGG 2 cut(s) 722, 748
NdeII GATC 6 cut(s) 310, 498, 664, 817, 877, 1095
NlaIV GGNNCC 2 cut(s) 164, 226
NmeAIII GCCGAG 1 cut(s) 254
NmuCI GTSAC 5 cut(s) 571, 589, 601, 970, 1102
NspI RCATGY 1 cut(s) 1000
PagI TCATGA 1 cut(s) 495
PciI ACATGT 1 cut(s) 996
PcsI WCGNNNNNNNCGW 1 cut(s) 463
PdmI GAANNNNTTC 1 cut(s) 356
PfeI GAWTC 4 cut(s) 811, 865, 925, 1080
PflFI GACNNNGTC 1 cut(s) 1262
PflMI CCANNNNNTGG 1 cut(s) 754
PfoI TCCNGGA 1 cut(s) 503
PkrI GCNGC 2 cut(s) 286, 1009
PleI GAGTC 3 cut(s) 173, 752, 977
PpsI GAGTC 3 cut(s) 173, 752, 977
PscI ACATGT 1 cut(s) 996
PshAI GACNNNNGTC 1 cut(s) 334
Psp124BI GAGCTC 1 cut(s) 941
Psp1406I AACGTT 1 cut(s) 832
PspN4I GGNNCC 2 cut(s) 164, 226
PspPI GGNCC 1 cut(s) 224
PsuI RGATCY 1 cut(s) 664
PsyI GACNNNGTC 1 cut(s) 1262
RsaI GTAC 2 cut(s) 63, 620
RsaNI GTAC 2 cut(s) 62, 619
RseI CAYNNNNRTG 4 cut(s) 219, 449, 873, 995
SacI GAGCTC 1 cut(s) 941
SaqAI TTAA 9 cut(s) 114, 348, 440, 557, 660, 737, 852, 1058, 1110
SatI GCNGC 2 cut(s) 285, 1008
Sau3AI GATC 6 cut(s) 310, 498, 664, 817, 877, 1095
Sau96I GGNCC 1 cut(s) 224
ScaI AGTACT 1 cut(s) 63
SchI GAGTC 3 cut(s) 173, 752, 978
ScrFI CCNGG 1 cut(s) 505
SduI GDGCHC 1 cut(s) 941
SfaNI GCATC 3 cut(s) 636, 708, 1249
SfcI CTRYAG 1 cut(s) 595
SmiMI CAYNNNNRTG 4 cut(s) 219, 449, 873, 995
Sse9I AATT 4 cut(s) 364, 491, 553, 764
SsiI CCGC 2 cut(s) 1248, 1256
SspI AATATT 1 cut(s) 41
SspMI CTAG 2 cut(s) 176, 1034
SstI GAGCTC 1 cut(s) 941
StyD4I CCNGG 1 cut(s) 503
StyI CCWWGG 3 cut(s) 157, 722, 748
TaaI ACNGT 5 cut(s) 343, 786, 976, 1102, 1108
TaiI ACGT 4 cut(s) 338, 591, 835, 915
TaqI TCGA 1 cut(s) 825
TasI AATT 4 cut(s) 364, 491, 553, 764
TatI WGTACW 2 cut(s) 61, 618
TfiI GAWTC 4 cut(s) 811, 865, 925, 1080
Tru1I TTAA 9 cut(s) 114, 348, 440, 557, 660, 737, 852, 1058, 1110
Tru9I TTAA 9 cut(s) 114, 348, 440, 557, 660, 737, 852, 1058, 1110
TscAI CASTG 2 cut(s) 1018, 1105
TseFI GTSAC 5 cut(s) 571, 589, 601, 970, 1102
TseI GCWGC 2 cut(s) 284, 1007
Tsp45I GTSAC 5 cut(s) 571, 589, 601, 970, 1102
TspDTI ATGAA 2 cut(s) 484, 878
TspGWI ACGGA 1 cut(s) 100
TspRI CASTG 2 cut(s) 1018, 1105
Tth111I GACNNNGTC 1 cut(s) 1262
Van91I CCANNNNNTGG 1 cut(s) 754
XapI RAATTY 2 cut(s) 491, 553
XbaI TCTAGA 1 cut(s) 1033
XceI RCATGY 1 cut(s) 1000
XcmI CCANNNNNNNNNTGG 1 cut(s) 729
XmiI GTMKAC 1 cut(s) 1025
XmnI GAANNNNTTC 1 cut(s) 356
XspI CTAG 2 cut(s) 176, 1034
ZraI GACGTC 1 cut(s) 589
ZrmI AGTACT 1 cut(s) 63
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.