Rroxscaffold_1G00044270

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Forward (+)
63115841 .. 63118941
3101 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00044270.1

Sequence Viewer

Length: 2031 bp
ATGATGATGCCAAGAGTTCTGCAAAGGCTAGAACTGAAACTTAATGAAACCTTTCCAAACCCTTTGCAACCTTTCCCTTTCCAATATATATTGCTTGCGGCCATTTTCTTCATTCTCTTACGCAGATGGTCCTCCTATAGAAACTCATGTGTACCACCTTCTCCACCAAAGCTACCCATCATTGGAAACCTTCACCAAGTAGGCTTGCTCCCTCATCGCTCACTTCAAACTTTATCTGAACGCCATGGGCCTGTTATGCTGCTCCATTTCGGAAGCAGGCCAGTCCTTGTCATCTCGTCGGCTGAGGCTGCCTCCCAGATCTTCAAAACCCATGACCTAATATTCTCCGACAGACCCAATTTCATCTTCTTTGAGAAGATTGTCTACAGCTACAAAGACATTGTAACGGCCCCGTACGGTGAGTACTGGAGGCAGCTCAGAAGTATATGCGTCTTAAATCTTTTGAGCAACAAAAGGGTTCGCTCTTTTCGTGCTGTCAGACAAGAGGAAACAAGATTCATGATATGCAACATACTACAGTCATGTAGTGCTGTATCATCATCATCCTCCTCATCCTCATCGGTTTTGAATCTAAGCGACATCTTTATGAAGCTTAGTAATGATATTATATGCAGAGTTGCAATGGGGAGGAAGTACAGCGATCTCGGGGACGATGGAGGGAAGATGTTTATGAAGATTGCTGGAGATTTGACAGAGTTCTTCACACGTGTTAACATCGGTGACTATATTCCATGGCTTGCTTGGTTCACTCGCCTCAGTGGGTTTGACGCTAAATTAGATGACCTGGCTAAACGAGCGGATGCGTTTTTAGATTTGGTTATTCAAGAGCATATTGATAAATCAAATAGTGGAATTGATGGTATGAACGACAATGAAGACCTGAAGGATTTTGTCGACGTTTTGCTTGCGGTTCAGAAAGAAAATGCAGTTGGTGTCCCTATTGATCGAGTTGGAATGAAGGGTACCATCCTGGATATGTTTATCGGTGGCAGTGATACCACATTTACAACCTTAGAGTGGGTGATGTCTGAGCTTATGAAGAATCCAAGGGTGATGACAAAACTGCAAAATGAGGTGAGGGGAGGAGTTGGAAACAAAGAAGACATAACAGAGGATGATTTGGCTGGAATGCACTACTTGAAGGCAGTGATCAAAGAGACTTTTCGCTTACATCCTCCATTCCCATTACTTATTCCCAGGATGTCCAACCAAAATGTGAAAATCAACGGTTACAACATTAAGGCTAACACACAAGTTATGGTGAATGCTTGGGCGATTGGGAGAGATCCCAATTCATTTATAAATGCCAAGCAGTATGAGCCTGAAAGATTCTTAAACAGTGCCATAGATTATAAAGGGAATGACTTCGAATTAATTCCATTTGGTTCTGGTAGACGAGGATGCCCAGGAATGCATTTTGCCGTGGTTGTGGTAGAGATTGTCCTGGCAAATATTGTTCACAAGTTTGACTGGATATTGCCTGATGGTGCAAGAGCGGAGGACTTAGACATGAGTGAATCCACTGGCATAACTGCACATAGAAAATATCCTCTCAAAGTGGATTGGAGTTGGGGCTTGTCCGGCGGTGACAGCGTCAACGACGGTGTCCTGCCTCGTCTGCGTGTGGCAGTAGCTGCCGGACTGGCTTTTGCTTCTTTGCTCTATTTGGTTTTGTTAGGGTCAGATTTGCTAATAAAGGCTGACTTTCTCCAAGGAGGGTCTGTTCGATTCCTCCTCCAGATGACGACGATGATGGTTTCGGTGGCTAGACATAATCAACCCTCTTTGGAAAAGATGATGGGTACCAGATCTTGGCTACAGGATAGAGGTCGGGTTGCGCATGTTTCTGCTCTGAAGTGGGTGGCAGAGCGGTGGTTGGATCGACGAGATCCGGTGGGTTTGGGTCATCTCACTGTGGCGGCTTTGAACGCTAGGCTGTCGGTGATAGGGCTGGAATTTATCAGATCCATTGTGATGTTTGCTGATTGGTGGCTGGGGCTTCATGGATAA

Protein Analysis

676

Amino Acids

76.11

Weight (kDa)

8.68

Isoelectric Point (pI)

45.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 52 - 516 2.4e-100 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000061)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G48270 AT3G48280 AT3G48290 AT3G48290 AT3G48300 AT3G48300 AT3G48310 AT3G48320 AT4G20235 AT4G20235
fragaria_vesca FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g12910 FvH4_2g36190 FvH4_3g14160 FvH4_3g14210 FvH4_3g14260 FvH4_3g14260 FvH4_3g21100 FvH4_3g21380 FvH4_4g24460 FvH4_4g24500 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06571 FvH4_5g06572 FvH4_5g06573 FvH4_5g06574 FvH4_5g06575 FvH4_5g06576 FvH4_5g06577 FvH4_5g06577 FvH4_5g07540 FvH4_5g07550 FvH4_5g07560 FvH4_5g07570 FvH4_5g29491 FvH4_5g29492 FvH4_6g23870 FvH4_6g23880 FvH4_6g26870 FvH4_7g11861 FvH4_7g11862 FvH4_7g13050 FvH4_7g13060 FvH4_7g13080 FvH4_7g13080 FvH4_7g22630 FvH4_7g22650 FvH4_7g22651 FvH4_7g23020
malus_domestica MD03G1207400.v1.1 MD03G1214800.v1.1 MD03G1218500.v1.1 MD06G1163100.v1.1 MD06G1163300.v1.1 MD06G1163400.v1.1 MD06G1163500.v1.1 MD06G1163600.v1.1 MD06G1163800.v1.1 MD06G1164000.v1.1 MD06G1164100.v1.1 MD06G1224400.v1.1 MD08G1222800.v1.1 MD08G1222900.v1.1 MD08G1223100.v1.1 MD11G1091500.v1.1 MD11G1091800.v1.1 MD14G1163200.v1.1 MD14G1169000.v1.1 MD15G1207200.v1.1 MD15G1207300.v1.1 MD17G1259400.v1.1
prunus_persica Prupe.4G198100_v2.0.a1 Prupe.4G199100_v2.0.a1 Prupe.4G199400_v2.0.a1 Prupe.4G199800_v2.0.a1 Prupe.4G225200_v2.0.a1 Prupe.4G239100_v2.0.a1 Prupe.5G156600_v2.0.a1 Prupe.5G163500_v2.0.a1 Prupe.7G209500_v2.0.a1 Prupe.I003400_v2.0.a1
pyrus_communis pycom03g16340 pycom06g14600 pycom06g14610 pycom06g14620 pycom06g14630 pycom06g14640 pycom06g14670 pycom06g14690 pycom08g19390 pycom08g19400 pycom08g19410 pycom11g07600 pycom11g07610 pycom11g07620 pycom11g07660 pycom14g13580 pycom14g14080 pycom14g14100 pycom14g14110 pycom15g18380 pycom17g26080
rosa_chinensis RchiOBHm_Chr1g0339441 RchiOBHm_Chr1g0339451 RchiOBHm_Chr1g0352191 RchiOBHm_Chr1g0368221 RchiOBHm_Chr2g0129531 RchiOBHm_Chr2g0129541 RchiOBHm_Chr3g0477631 RchiOBHm_Chr3g0482551 RchiOBHm_Chr3g0482561 RchiOBHm_Chr3g0482571 RchiOBHm_Chr4g0411601 RchiOBHm_Chr4g0422181 RchiOBHm_Chr5g0036661 RchiOBHm_Chr5g0036731 RchiOBHm_Chr6g0274021 RchiOBHm_Chr7g0190921 RchiOBHm_Chr7g0190931 RchiOBHm_Chr7g0190941 RchiOBHm_Chr7g0190951 RchiOBHm_Chr7g0190961 RchiOBHm_Chr7g0190971 RchiOBHm_Chr7g0191001 RchiOBHm_Chr7g0191011 RchiOBHm_Chr7g0191021 RchiOBHm_Chr7g0192181 RchiOBHm_Chr7g0192191 RchiOBHm_Chr7g0192201 RchiOBHm_Chr7g0192221 RchiOBHm_Chr7g0192231 RchiOBHm_Chr7g0192281 RchiOBHm_Chr7g0197311
rosa_laevigata RLG00000003942 RLG00000004345 RLG00000004379 RLG00000004383 RLG00000004384 RLG00000004385 RLG00000004387 RLG00000004388 RLG00000004389 RLG00000004480 RLG00000004481 RLG00000004482 RLG00000004483 RLG00000004485 RLG00000008342 RLG00000008401 RLG00000013583 RLG00000017044 RLG00000027229 RLG00000028349 RLG00000028350 RLG00000028353 RLG00000028820 RLG00000033707 RLG00000033710
rosa_multiflora Rmu_co8020340.1_g000001 Rmu_co8096640.1_g000001 Rmu_co8214930.1_g000001 Rmu_co8223272.1_g000001 Rmu_co8282535.1_g000001 Rmu_co8343567.1_g000001 Rmu_co8404191.1_g000001 Rmu_co8455157.1_g000001 Rmu_sc0000062.1_g000028 Rmu_sc0000082.1_g000091 Rmu_sc0000509.1_g000017 Rmu_sc0000775.1_g000001 Rmu_sc0000999.1_g000034 Rmu_sc0001559.1_g000004 Rmu_sc0001559.1_g000009 Rmu_sc0002164.1_g000001 Rmu_sc0002164.1_g000005 Rmu_sc0002164.1_g000007 Rmu_sc0002164.1_g000008 Rmu_sc0002164.1_g000009 Rmu_sc0002164.1_g000019 Rmu_sc0002247.1_g000009 Rmu_sc0002373.1_g000002 Rmu_sc0002373.1_g000003 Rmu_sc0002944.1_g000059 Rmu_sc0003930.1_g000004 Rmu_sc0004958.1_g000001 Rmu_sc0005197.1_g000014 Rmu_sc0005898.1_g000008 Rmu_sc0005898.1_g000009 Rmu_sc0005898.1_g000015 Rmu_sc0006059.1_g000004 Rmu_sc0006059.1_g000010 Rmu_sc0006903.1_g000007 Rmu_sc0006903.1_g000008 Rmu_sc0006968.1_g000001 Rmu_sc0011009.1_g000009 Rmu_sc0022852.1_g000002 Rmu_sc0033854.1_g000001 Rmu_ssc0000421.1_g000057 Rmu_ssc0000421.1_g000067 Rmu_ssc0000421.1_g000069 Rmu_ssc0000421.1_g000072 Rmu_ssc0000421.1_g000081 Rmu_ssc0000421.1_g000086
rosa_roxburghii Rroxscaffold_158G00443680 Rroxscaffold_158G00443710 Rroxscaffold_158G00443720 Rroxscaffold_158G00443740 Rroxscaffold_1G00034950 Rroxscaffold_1G00044240 Rroxscaffold_1G00044270 Rroxscaffold_3G00241380 Rroxscaffold_3G00247000 Rroxscaffold_3G00263120 Rroxscaffold_3G00263150 Rroxscaffold_3G00263160 Rroxscaffold_3G00263170 Rroxscaffold_3G00263180 Rroxscaffold_3G00263190 Rroxscaffold_3G00263210 Rroxscaffold_3G00263230 Rroxscaffold_3G00263260 Rroxscaffold_3G00264110 Rroxscaffold_3G00264130 Rroxscaffold_3G00264160 Rroxscaffold_3G00264180 Rroxscaffold_3G00264200 Rroxscaffold_4G00288750 Rroxscaffold_4G00303110 Rroxscaffold_4G00303120 Rroxscaffold_4G00322280 Rroxscaffold_5G00356200 Rroxscaffold_6G00399150 Rroxscaffold_6G00399290 Rroxscaffold_7G00194770
rosa_rugosa Rorug01G0225300 Rorug01G0225400 Rorug01G0225800 Rorug01G0226000 Rorug01G0339400 Rorug01G0451500 Rorug03G0196900 Rorug03G0294900 Rorug04G0107500 Rorug04G0107600 Rorug04G0129700 Rorug04G0178000 Rorug05G0144900.1 Rorug05G0145000 Rorug05G0228000 Rorug05G0228600 Rorug06G0078300 Rorug06G0508000 Rorug06G0508100 Rorug06G0508100 Rorug06G0508400 Rorug06G0513400 Rorug07G0000100 Rorug07G0000200 Rorug07G0000300 Rorug07G0000500 Rorug07G0000800
rosa_samantha Rh1BG060400 Rh1BG210300 Rh1BG210700 Rh1BG210800 Rh1BG309800 Rh1CG223800 Rh1CG224200 Rh1CG325200 Rh1DG237000 Rh1DG237400 Rh1DG341600 Rh2DG365700 Rh3AG212500 Rh3AG248400 Rh3CG239800 Rh3DG239300 Rh4AG169300 Rh4BG166200 Rh4BG240500 Rh4BG240600 Rh4DG163600 Rh5AG249600 Rh5AG249900 Rh5AG250000 Rh5CG283100 Rh5CG283200 Rh5CG283400 Rh5DG259200 Rh5DG259800 Rh6BG197700 Rh6CG197800 Rh6DG189400 Rh7AG114900 Rh7AG115000 Rh7AG115200 Rh7AG115300 Rh7AG115400 Rh7AG115500 Rh7AG123900 Rh7AG124100 Rh7AG124300 Rh7BG117200 Rh7BG117400 Rh7BG118400 Rh7BG125400 Rh7BG125600 Rh7BG125700 Rh7BG125800 Rh7BG125900 Rh7BG126000 Rh7BG126400 Rh7BG126600 Rh7BG126700 Rh7BG166200 Rh7DG118600 Rh7DG118700 Rh7DG118900 Rh7DG119000 Rh7DG119100 Rh7DG127400 Rh7DG127600 Rh7DG127700 Rh7DG127900 Rh7DG128200
rosa_wichuraiana Rw1G013270 Rw1G020790 Rw2G027890 Rw2G028040 Rw3G019240 Rw4G014070 Rw4G020540 Rw5G021320 Rw5G022970 Rw6G016920 Rw7G010020 Rw7G010040 Rw7G010580 Rw7G010590 Rw7G010600 Rw7G010610 Rw7G010620 Rw7G010630 Rw7G010640 Rw7G010690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1322, 1374
Acc16I TGCGCA 1 cut(s) 1860
Acc65I GGTACC 2 cut(s) 983, 1823
AccB1I GGYRCC 2 cut(s) 983, 1823
AccB7I CCANNNNNTGG 1 cut(s) 1833
AccBSI CCGCTC 3 cut(s) 818, 1517, 1891
AccI GTMKAC 3 cut(s) 384, 915, 1414
AciI CCGC 7 cut(s) 98, 818, 929, 1517, 1605, 1891, 1940
AclWI GGATC 4 cut(s) 1301, 1904, 1908, 1980
AcoI YGGCCR 1 cut(s) 99
AcsI RAATTY 1 cut(s) 1976
AcuI CTGAAG 2 cut(s) 923, 1895
AcvI CACGTG 1 cut(s) 728
AfaI GTAC 6 cut(s) 153, 416, 425, 656, 985, 1825
AfiI CCNNNNNNNGG 3 cut(s) 182, 1038, 1833
AflIII ACRYGT 2 cut(s) 725, 727
AgsI TTSAA 6 cut(s) 227, 325, 589, 845, 1162, 1948
AjnI CCWGG 5 cut(s) 804, 990, 1217, 1426, 1464
AjuI GAANNNNNNNTTGG 4 cut(s) 350, 382, 933, 965
AloI GAACNNNNNNTCC 2 cut(s) 1728, 1760
AluBI AGCT 6 cut(s) 172, 390, 436, 613, 1054, 1655
AluI AGCT 6 cut(s) 172, 390, 436, 613, 1054, 1655
Alw26I GTCTC 1 cut(s) 1172
AlwI GGATC 4 cut(s) 1301, 1904, 1908, 1980
AlwNI CAGNNNCTG 1 cut(s) 1655
Ama87I CYCGRG 1 cut(s) 665
AoxI GGCC 4 cut(s) 99, 248, 278, 408
ApeKI GCWGC 4 cut(s) 259, 308, 433, 1655
ApoI RAATTY 1 cut(s) 1976
AseI ATTAAT 1 cut(s) 1394
Asp700I GAANNNNTTC 3 cut(s) 51, 1385, 1395
Asp718I GGTACC 2 cut(s) 983, 1823
AspLEI GCGC 1 cut(s) 1861
AspS9I GGNCC 3 cut(s) 129, 248, 409
AsuHPI GGTGA 9 cut(s) 185, 431, 752, 1054, 1084, 1108, 1294, 1619, 1975
AsuII TTCGAA 1 cut(s) 1389
AvaI CYCGRG 1 cut(s) 665
AvaII GGWCC 1 cut(s) 129
BanI GGYRCC 2 cut(s) 983, 1823
BarI GAAGNNNNNNTAC 2 cut(s) 368, 400
BbrPI CACGTG 1 cut(s) 728
BbsI GAAGAC 2 cut(s) 903, 1128
BbvCI CCTCAGC 1 cut(s) 303
BbvI GCAGC 4 cut(s) 246, 295, 445, 1642
BccI CCATC 8 cut(s) 120, 185, 668, 872, 995, 1499, 1768, 1813
BceAI ACGGC 2 cut(s) 423, 1427
BciT130I CCWGG 5 cut(s) 806, 992, 1219, 1428, 1466
BclI TGATCA 1 cut(s) 1170
BcoDI GTCTC 1 cut(s) 1172
BfaI CTAG 3 cut(s) 29, 1788, 1953
BfmI CTRYAG 4 cut(s) 136, 385, 536, 1838
BglI GCCNNNNNGGC 1 cut(s) 1664
BglII AGATCT 2 cut(s) 318, 1829
BisI GCNGC 6 cut(s) 99, 260, 309, 434, 1656, 1941
BlsI GCNGC 6 cut(s) 100, 261, 310, 435, 1657, 1942
BmcAI AGTACT 1 cut(s) 425
Bme1390I CCNGG 5 cut(s) 806, 992, 1219, 1428, 1466
Bme18I GGWCC 1 cut(s) 129
BmeT110I CYCGRG 1 cut(s) 665
BmgT120I GGNCC 3 cut(s) 129, 248, 409
BmiI GGNNCC 3 cut(s) 411, 985, 1825
BmrFI CCNGG 5 cut(s) 806, 992, 1219, 1428, 1466
BmsI GCATC 2 cut(s) 811, 1412
BpiI GAAGAC 2 cut(s) 903, 1128
BplI GAGNNNNNCTC 2 cut(s) 296, 328
BpmI CTGGAG 3 cut(s) 448, 723, 1742
Bpu10I CCTNAGC 1 cut(s) 303
Bpu14I TTCGAA 1 cut(s) 1389
BsaAI YACGTR 1 cut(s) 728
BsaJI CCNNGG 7 cut(s) 244, 752, 1067, 1217, 1426, 1443, 1732
BsaWI WCCGGW 1 cut(s) 1912
BsaXI ACNNNNNCTCC 2 cut(s) 1728, 1758
Bsc4I CCNNNNNNNGG 3 cut(s) 182, 1038, 1833
Bse1I ACTGG 5 cut(s) 281, 431, 1496, 1549, 1668
Bse3DI GCAATG 1 cut(s) 648
BseBI CCWGG 5 cut(s) 806, 992, 1219, 1428, 1466
BseDI CCNNGG 7 cut(s) 244, 752, 1067, 1217, 1426, 1443, 1732
BseGI GGATG 8 cut(s) 563, 572, 826, 987, 1141, 1192, 1227, 1427
BseLI CCNNNNNNNGG 3 cut(s) 182, 1038, 1833
BseMI GCAATG 1 cut(s) 648
BseMII CTCAG 4 cut(s) 294, 451, 790, 1041
BseNI ACTGG 5 cut(s) 281, 431, 1496, 1549, 1668
BseRI GAGGAG 3 cut(s) 559, 1119, 1745
BseXI GCAGC 4 cut(s) 246, 295, 445, 1642
BseYI CCCAGC 1 cut(s) 2014
BsgI GTGCAG 1 cut(s) 1539
BshFI GGCC 4 cut(s) 101, 250, 280, 410
BshNI GGYRCC 2 cut(s) 983, 1823
BsiHKCI CYCGRG 1 cut(s) 665
BsiSI CCGG 3 cut(s) 1602, 1659, 1913
BsiWI CGTACG 1 cut(s) 414
BslFI GGGAC 2 cut(s) 683, 941
BslI CCNNNNNNNGG 3 cut(s) 182, 1038, 1833
BsmAI GTCTC 1 cut(s) 1172
BsmFI GGGAC 2 cut(s) 683, 941
BsmI GAATGC 3 cut(s) 1155, 1291, 1437
BsnI GGCC 4 cut(s) 101, 250, 280, 410
BsoBI CYCGRG 1 cut(s) 665
Bsp119I TTCGAA 1 cut(s) 1389
Bsp143I GATC 9 cut(s) 318, 661, 964, 1170, 1306, 1829, 1900, 1909, 1985
Bsp19I CCATGG 2 cut(s) 244, 752
BspACI CCGC 7 cut(s) 98, 818, 929, 1517, 1605, 1891, 1940
BspANI GGCC 4 cut(s) 101, 250, 280, 410
BspCNI CTCAG 4 cut(s) 295, 450, 789, 1042
BspHI TCATGA 1 cut(s) 519
BspLI GGNNCC 3 cut(s) 411, 985, 1825
BspPI GGATC 4 cut(s) 1301, 1904, 1908, 1980
BspT104I TTCGAA 1 cut(s) 1389
BspT107I GGYRCC 2 cut(s) 983, 1823
BsrBI CCGCTC 3 cut(s) 818, 1517, 1891
BsrDI GCAATG 1 cut(s) 648
BsrI ACTGG 5 cut(s) 281, 431, 1496, 1549, 1668
BssECI CCNNGG 7 cut(s) 244, 752, 1067, 1217, 1426, 1443, 1732
BssMI GATC 9 cut(s) 318, 661, 964, 1170, 1306, 1829, 1900, 1909, 1985
BssT1I CCWWGG 4 cut(s) 244, 752, 1067, 1732
Bst2UI CCWGG 5 cut(s) 806, 992, 1219, 1428, 1466
Bst4CI ACNGT 6 cut(s) 419, 540, 1250, 1361, 1625, 1936
BstAPI GCANNNNNTGC 1 cut(s) 1655
BstBAI YACGTR 1 cut(s) 728
BstBI TTCGAA 1 cut(s) 1389
BstC8I GCNNGC 5 cut(s) 96, 206, 278, 759, 927
BstDEI CTNAG 8 cut(s) 303, 437, 593, 614, 776, 1033, 1050, 1525
BstDSI CCRYGG 3 cut(s) 244, 752, 1443
BstF5I GGATG 8 cut(s) 563, 572, 826, 987, 1141, 1192, 1227, 1427
BstHHI GCGC 1 cut(s) 1861
BstKTI GATC 9 cut(s) 321, 664, 967, 1173, 1309, 1832, 1903, 1912, 1988
BstMAI GTCTC 1 cut(s) 1172
BstMBI GATC 9 cut(s) 318, 661, 964, 1170, 1306, 1829, 1900, 1909, 1985
BstNI CCWGG 5 cut(s) 806, 992, 1219, 1428, 1466
BstNSI RCATGY 1 cut(s) 1865
BstSCI CCNGG 5 cut(s) 804, 990, 1217, 1426, 1464
BstSFI CTRYAG 4 cut(s) 136, 385, 536, 1838
BstV1I GCAGC 4 cut(s) 246, 295, 445, 1642
BstV2I GAAGAC 2 cut(s) 903, 1128
BstX2I RGATCY 5 cut(s) 318, 1306, 1829, 1909, 1985
BstYI RGATCY 5 cut(s) 318, 1306, 1829, 1909, 1985
BsuRI GGCC 4 cut(s) 101, 250, 280, 410
BtgI CCRYGG 3 cut(s) 244, 752, 1443
BtgZI GCGATG 1 cut(s) 200
BtsCI GGATG 8 cut(s) 563, 572, 826, 987, 1141, 1192, 1227, 1427
BtsI GCAGTG 2 cut(s) 1018, 1173
BtsIMutI CAGTG 6 cut(s) 784, 1018, 1173, 1366, 1542, 1932
Cac8I GCNNGC 5 cut(s) 96, 206, 278, 759, 927
CaiI CAGNNNCTG 1 cut(s) 1655
CciI TCATGA 1 cut(s) 519
CfoI GCGC 1 cut(s) 1861
Cfr13I GGNCC 3 cut(s) 129, 248, 409
CseI GACGC 3 cut(s) 439, 797, 1603
Csp6I GTAC 6 cut(s) 152, 415, 424, 655, 984, 1824
CviAII CATG 9 cut(s) 147, 245, 332, 520, 543, 753, 1531, 1862, 2024
CviQI GTAC 6 cut(s) 152, 415, 424, 655, 984, 1824
DdeI CTNAG 8 cut(s) 303, 437, 593, 614, 776, 1033, 1050, 1525
DpnI GATC 9 cut(s) 320, 663, 966, 1172, 1308, 1831, 1902, 1911, 1987
DpnII GATC 9 cut(s) 318, 661, 964, 1170, 1306, 1829, 1900, 1909, 1985
EaeI YGGCCR 1 cut(s) 99
Eco130I CCWWGG 4 cut(s) 244, 752, 1067, 1732
Eco47I GGWCC 1 cut(s) 129
Eco57I CTGAAG 2 cut(s) 923, 1895
Eco72I CACGTG 1 cut(s) 728
Eco88I CYCGRG 1 cut(s) 665
EcoRII CCWGG 5 cut(s) 804, 990, 1217, 1426, 1464
EcoT14I CCWWGG 4 cut(s) 244, 752, 1067, 1732
EcoT22I ATGCAT 1 cut(s) 1437
ErhI CCWWGG 4 cut(s) 244, 752, 1067, 1732
FaeI CATG 9 cut(s) 150, 248, 335, 523, 546, 756, 1534, 1865, 2027
FalI AAGNNNNNCTT 2 cut(s) 1709, 1741
FaqI GGGAC 2 cut(s) 683, 941
FatI CATG 9 cut(s) 146, 244, 331, 519, 542, 752, 1530, 1861, 2023
FbaI TGATCA 1 cut(s) 1170
FblI GTMKAC 3 cut(s) 384, 915, 1414
Fnu4HI GCNGC 6 cut(s) 99, 260, 309, 434, 1656, 1941
FokI GGATG 8 cut(s) 550, 559, 833, 974, 1148, 1179, 1234, 1434
Fsp4HI GCNGC 6 cut(s) 99, 260, 309, 434, 1656, 1941
FspBI CTAG 3 cut(s) 29, 1788, 1953
FspI TGCGCA 1 cut(s) 1860
GlaI GCGC 1 cut(s) 1860
GluI GCNGC 6 cut(s) 99, 260, 309, 434, 1656, 1941
GsaI CCCAGC 1 cut(s) 2018
GsuI CTGGAG 3 cut(s) 448, 723, 1742
HaeIII GGCC 4 cut(s) 101, 250, 280, 410
HapII CCGG 3 cut(s) 1602, 1659, 1913
HgaI GACGC 3 cut(s) 439, 797, 1603
HhaI GCGC 1 cut(s) 1861
Hin1II CATG 9 cut(s) 150, 248, 335, 523, 546, 756, 1534, 1865, 2027
Hin6I GCGC 1 cut(s) 1859
HinP1I GCGC 1 cut(s) 1859
HincII GTYRAC 3 cut(s) 733, 916, 1618
HindII GTYRAC 3 cut(s) 733, 916, 1618
HindIII AAGCTT 1 cut(s) 611
HinfI GANTC 6 cut(s) 516, 589, 1063, 1350, 1538, 1749
HpaI GTTAAC 1 cut(s) 733
HpaII CCGG 3 cut(s) 1602, 1659, 1913
HphI GGTGA 9 cut(s) 185, 431, 752, 1054, 1084, 1108, 1294, 1619, 1975
Hpy166II GTNNAC 8 cut(s) 152, 385, 733, 768, 916, 1415, 1480, 1618
Hpy188III TCNNGA 3 cut(s) 520, 845, 1759
Hpy8I GTNNAC 8 cut(s) 152, 385, 733, 768, 916, 1415, 1480, 1618
Hpy99I CGWCG 5 cut(s) 301, 920, 1625, 1771, 1908
HpyAV CCTTC 5 cut(s) 168, 200, 898, 973, 1156
HpyCH4III ACNGT 6 cut(s) 419, 540, 1250, 1361, 1625, 1936
HpyCH4IV ACGT 2 cut(s) 727, 918
HpyF3I CTNAG 8 cut(s) 303, 437, 593, 614, 776, 1033, 1050, 1525
HpySE526I ACGT 2 cut(s) 727, 918
Hsp92II CATG 9 cut(s) 150, 248, 335, 523, 546, 756, 1534, 1865, 2027
HspAI GCGC 1 cut(s) 1859
KpnI GGTACC 2 cut(s) 987, 1827
Ksp22I TGATCA 1 cut(s) 1170
KspAI GTTAAC 1 cut(s) 733
Kzo9I GATC 9 cut(s) 318, 661, 964, 1170, 1306, 1829, 1900, 1909, 1985
LmnI GCTCC 2 cut(s) 213, 267
Lsp1109I GCAGC 4 cut(s) 246, 295, 445, 1642
LweI GCATC 2 cut(s) 811, 1412
MaeI CTAG 3 cut(s) 29, 1788, 1953
MaeII ACGT 2 cut(s) 727, 918
MaeIII GTNAC 4 cut(s) 403, 740, 1250, 1607
MalI GATC 9 cut(s) 320, 663, 966, 1172, 1308, 1831, 1902, 1911, 1987
MbiI CCGCTC 3 cut(s) 818, 1517, 1891
MboI GATC 9 cut(s) 318, 661, 964, 1170, 1306, 1829, 1900, 1909, 1985
MflI RGATCY 5 cut(s) 318, 1306, 1829, 1909, 1985
MluCI AATT 7 cut(s) 358, 794, 873, 1312, 1391, 1395, 1976
MmeI TCCRAC 5 cut(s) 372, 952, 1090, 1251, 1878
Mph1103I ATGCAT 1 cut(s) 1437
MroXI GAANNNNTTC 3 cut(s) 51, 1385, 1395
MseI TTAA 6 cut(s) 42, 455, 732, 1260, 1355, 1394
MslI CAYNNNNRTG 2 cut(s) 605, 1994
MspI CCGG 3 cut(s) 1602, 1659, 1913
MspR9I CCNGG 5 cut(s) 806, 992, 1219, 1428, 1466
Mva1269I GAATGC 3 cut(s) 1155, 1291, 1437
MvaI CCWGG 5 cut(s) 806, 992, 1219, 1428, 1466
NcoI CCATGG 2 cut(s) 244, 752
NdeII GATC 9 cut(s) 318, 661, 964, 1170, 1306, 1829, 1900, 1909, 1985
NlaIII CATG 9 cut(s) 150, 248, 335, 523, 546, 756, 1534, 1865, 2027
NlaIV GGNNCC 3 cut(s) 411, 985, 1825
NmuCI GTSAC 2 cut(s) 740, 1607
NsbI TGCGCA 1 cut(s) 1860
NsiI ATGCAT 1 cut(s) 1437
NspI RCATGY 1 cut(s) 1865
NspV TTCGAA 1 cut(s) 1389
PagI TCATGA 1 cut(s) 519
PcsI WCGNNNNNNNCGW 1 cut(s) 487
PctI GAATGC 3 cut(s) 1155, 1291, 1437
PdmI GAANNNNTTC 3 cut(s) 51, 1385, 1395
PfeI GAWTC 6 cut(s) 516, 589, 1063, 1350, 1538, 1749
Pfl23II CGTACG 1 cut(s) 414
PflFI GACNNNGTC 2 cut(s) 1613, 1625
PflMI CCANNNNNTGG 1 cut(s) 1833
PfoI TCCNGGA 1 cut(s) 990
PkrI GCNGC 6 cut(s) 100, 261, 310, 435, 1657, 1942
PmaCI CACGTG 1 cut(s) 728
PmlI CACGTG 1 cut(s) 728
Ppu21I YACGTR 1 cut(s) 728
PshBI ATTAAT 1 cut(s) 1394
PsiI TTATAA 2 cut(s) 1322, 1374
Psp6I CCWGG 5 cut(s) 804, 990, 1217, 1426, 1464
PspCI CACGTG 1 cut(s) 728
PspFI CCCAGC 1 cut(s) 2014
PspGI CCWGG 5 cut(s) 804, 990, 1217, 1426, 1464
PspLI CGTACG 1 cut(s) 414
PspN4I GGNNCC 3 cut(s) 411, 985, 1825
PspPI GGNCC 3 cut(s) 129, 248, 409
PstNI CAGNNNCTG 1 cut(s) 1655
PsuI RGATCY 5 cut(s) 318, 1306, 1829, 1909, 1985
PsyI GACNNNGTC 2 cut(s) 1613, 1625
RsaI GTAC 6 cut(s) 153, 416, 425, 656, 985, 1825
RsaNI GTAC 6 cut(s) 152, 415, 424, 655, 984, 1824
RseI CAYNNNNRTG 2 cut(s) 605, 1994
SalI GTCGAC 1 cut(s) 914
SaqAI TTAA 6 cut(s) 42, 455, 732, 1260, 1355, 1394
SatI GCNGC 6 cut(s) 99, 260, 309, 434, 1656, 1941
Sau3AI GATC 9 cut(s) 318, 661, 964, 1170, 1306, 1829, 1900, 1909, 1985
Sau96I GGNCC 3 cut(s) 129, 248, 409
ScaI AGTACT 1 cut(s) 425
ScrFI CCNGG 5 cut(s) 806, 992, 1219, 1428, 1466
SfaNI GCATC 2 cut(s) 811, 1412
SfcI CTRYAG 4 cut(s) 136, 385, 536, 1838
SfuI TTCGAA 1 cut(s) 1389
SinI GGWCC 1 cut(s) 129
SmiMI CAYNNNNRTG 2 cut(s) 605, 1994
Sse9I AATT 7 cut(s) 358, 794, 873, 1312, 1391, 1395, 1976
SsiI CCGC 7 cut(s) 98, 818, 929, 1517, 1605, 1891, 1940
SspI AATATT 2 cut(s) 342, 1474
SspMI CTAG 3 cut(s) 29, 1788, 1953
StyD4I CCNGG 5 cut(s) 804, 990, 1217, 1426, 1464
StyI CCWWGG 4 cut(s) 244, 752, 1067, 1732
TaaI ACNGT 6 cut(s) 419, 540, 1250, 1361, 1625, 1936
TaiI ACGT 2 cut(s) 730, 921
TaqI TCGA 5 cut(s) 915, 967, 1389, 1747, 1903
TasI AATT 7 cut(s) 358, 794, 873, 1312, 1391, 1395, 1976
TatI WGTACW 2 cut(s) 423, 654
TauI GCSGC 2 cut(s) 101, 1943
TfiI GAWTC 6 cut(s) 516, 589, 1063, 1350, 1538, 1749
Tru1I TTAA 6 cut(s) 42, 455, 732, 1260, 1355, 1394
Tru9I TTAA 6 cut(s) 42, 455, 732, 1260, 1355, 1394
TscAI CASTG 6 cut(s) 784, 1018, 1173, 1366, 1549, 1939
TseFI GTSAC 2 cut(s) 740, 1607
TseI GCWGC 4 cut(s) 259, 308, 433, 1655
Tsp45I GTSAC 2 cut(s) 740, 1607
TspRI CASTG 6 cut(s) 784, 1018, 1173, 1366, 1549, 1939
Tth111I GACNNNGTC 2 cut(s) 1613, 1625
Van91I CCANNNNNTGG 1 cut(s) 1833
VpaK11BI GGWCC 1 cut(s) 129
VspI ATTAAT 1 cut(s) 1394
XapI RAATTY 1 cut(s) 1976
XceI RCATGY 1 cut(s) 1865
XcmI CCANNNNNNNNNTGG 1 cut(s) 759
XmiI GTMKAC 3 cut(s) 384, 915, 1414
XmnI GAANNNNTTC 3 cut(s) 51, 1385, 1395
XspI CTAG 3 cut(s) 29, 1788, 1953
ZrmI AGTACT 1 cut(s) 425
Zsp2I ATGCAT 1 cut(s) 1437
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.