Prupe.4G227700_v2.0.a1

metal ion binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000343
Physical Location & Seq
Reverse (-)
14526604 .. 14535467
8864 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G227700.1

Sequence Viewer

Length: 2367 bp
ATGGAGAAGAAGACGAAGCGACGAGGCGAATTAGGAATGAATAGTTTGCTCGAGTTTCATCGATCAAGAGACGAAGCAAAGTCCAAGGACATTCAAGCCATCGAAAAGCCCGGATTTATAGTTGATCACATTGAAGATTATGGGATTGAAGTTGAAGACGAGTCCAATGATGATGATGACCTGTTTGATTCTGTTTGTGCTTTTTGTGATAATGGTGGCGAGCTTTTGTGCTGCGAAGGGAGATGCCTAAGGTCCTTTCATGCAACTAAAAGGCATGGTAAGGATACTAGGTGTGAATCTCTTGGCTTTACCCAGGATGAAGTAGATGCGATGCCAATTTTCTTCTGCAAGAACTGTGAATATAAACAGCATCAGTGCTTTGCTTGCGGGAAGCTAGGATCCTCTGATAAATCTTCAGTTGCTGAGGTCTTCCGCTGTGTTTCTGCAACTTGTGGTCAATTTTACCATCCACACTGTATTGCACAACTCATTTATCAAGACAACAGAGTTACTGCTGAAGAGCTTGAGAAAAAAATTTCTATGGGGGAATCTTTTACGTGTCCAATTCATAAATGCTGCGTTTGTAAACAAGGAGAGAATAAGAAAGATCCCGAGTTGTGGTTTGCTGTGTGTAGGCGTTGTCCAAAATCCTACCACAGGAAATGCTTACCAAGTGAGATTGTAATTGAAAAAATTGAGAAAACAGAGGAAGAGGAAGAAGAGGAAGAGGAAGAAGAGGAAGAAGAAGAAGTGGAAAACGAAGAAGATGAAGACATAGAGGGTGTAGATGTAATAACAAGAGGTTGGGATGGTCTATTACCTAACCGTGTACTAATATACTGCCTGAAACATGAGATAGTTAAAAGAATTAAAACTCCAATAAGGGACCACTTAAAATTCCCTGATGTTAACGAAAAGAAGACTGGTCTTGAAGAGAAAAAGAAAAAGAGGGCAGCAGAGTCCGTTTTAGATAGAGAGAAATCTGTTACAAAGAAGAGAAACCTTCCATCTGAAGAATTCTATAGGGGTAAAACTGCTCATACAATTTCTAAACAGAAGCTGAAGTCACCTTGTGCTGTAAAAGTGGGCGCCAGCAGAACTACTGAAAAAGTACCTTTTGGGTTCGATATATCAAGAAGGGTGAAAGTAAATAGTTCATTGAAAAAGGAAATTAAGACTTCCGTGGCTGAGGAAAGGAAGTCCTCATTCGGTGATATGCTATTTGGGGTGAAGGGGTCTGAGCAAGTGAAGTCAGGGAAGCAGGGTAAACCTGATGGTGAGCGTAACTCGGCAGTAGTTAATCTTGCCTCTAAAAAGTTGAGCAGCGCACCACCTTCTTTAGATGTAGCTACAAAGAGAAGATTATTGGCTCTAATGAAAGATGCTGTGTCTTCAATAACTTTGGAAGAGGTTAAAAGAAAGCATAAAGTTCCTTCGACTTATGCATTGTCGTCCAGAAATGCTGTGGAGAGGAACATTACACTTGGAAAGGTGGAAGGCTCACTTGAGGCTGTTCGAACGGCGTTACGGAAACTAGAGGAAGGATGCAGTACTGAAGATTTAGAGGCTGTGTGTGCACCTGCGATGATTAACCAGATTTATAAGTGGAAGAACAAACTGAGAGTCTATCTTGCACCTTTTTTGCATGGAATGCGCTACACCTCCTTTGGTCGCCATTTTACGAAGGTGGAAAAATTAGAAGAGATTGCTGATAGGCTCCATTGGTACGTAAAGAATGGAGATACGATTGTGGACTTCTGTTGTGGTGCTAATGATTTCAGCATCATAATGAAGAAAAAGCTTGAAGAGACGGGGAAGAAGTGCTTTTACAAAAACTACGACTTCATTCAACCAAAGAACGATTTCAATTTTGAGAAGAGAGATTGGATGACTGTTCAACCAGAGGAGTTACGGACAGGGTCACGATTGATCATGGGGTTGAACCCTCCTTTCGGAGTTAAAGCAGCTTTGGCGAACAAGTTTATCGACAAGGCTCTCGAGTTCAATCCAAGGATTCTTATTCTAATTGTTCCACCAGAAACTCAAAGGTTAAACGAAAAGAATTCGCATTATAATCTAATTTGGGAGGATGAGCAGTTTCTGTCAGGAAAGTCATTCTATCTCCCTGGATCCGTTGATCAGAATGACAAACAAATGGAGCAGTGGAATGTGAGGCCACCTCCACTCTATCTTTGGAGCCGTCCTGATTGGTCTGCTGAGAACAAGGCTATAGCTCGAGAGCATGGGCACATCTCTGCATCACCACCAGGGTTTCATGAAAACATTGCCAAAGCAACATCTCTGCACCACTTCCCTAACTCTAGGCGATTTCATCACAACATTCCCAAATTCACAAACAATTTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006325 GO:0006355 GO:0006950 GO:0006952 GO:0006996 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0009605 GO:0009607 GO:0009620 GO:0009791 GO:0009889 GO:0009893 GO:0009909 GO:0009911 GO:0009987 GO:0010228 GO:0010468 GO:0010556 GO:0010604 GO:0010638 GO:0016043 GO:0019219 GO:0019222 GO:0022414 GO:0023052 GO:0030154 GO:0031056 GO:0031058 GO:0031060 GO:0031062 GO:0031323 GO:0031325 GO:0031326 GO:0031399 GO:0031401 GO:0031440 GO:0031935 GO:0031937 GO:0032268 GO:0032270 GO:0032501 GO:0032502 GO:0033043 GO:0033044 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0043954 GO:0044030 GO:0044424 GO:0044464 GO:0048366 GO:0048367 GO:0048468 GO:0048518 GO:0048522 GO:0048580 GO:0048582 GO:0048608 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0048869 GO:0050684 GO:0050789 GO:0050793 GO:0050794 GO:0050832 GO:0050896 GO:0051052 GO:0051094 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051239 GO:0051240 GO:0051246 GO:0051247 GO:0051252 GO:0051276 GO:0051570 GO:0051574 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0060968 GO:0061085 GO:0061087 GO:0061458 GO:0065007 GO:0070827 GO:0070828 GO:0070829 GO:0071840 GO:0080090 GO:0090436 GO:0097159 GO:0098542 GO:0099402 GO:0140110 GO:1900109 GO:1900111 GO:1900363 GO:1901363 GO:1902275 GO:1903311 GO:1903506 GO:1905269 GO:2000024 GO:2000026 GO:2000112 GO:2000241 GO:2000243 GO:2001141 GO:2001252
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DNMT1-RFD

Protein Analysis

789

Amino Acids

90.31

Weight (kDa)

7.85

Isoelectric Point (pI)

54.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000343)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48090 AT5G48090 AT5G48090 AT5G55390 AT5G55390 AT5G55390
fragaria_vesca FvH4_3g23690 FvH4_4g08730 FvH4_4g08730 FvH4_4g08730 FvH4_4g08730 FvH4_4g08730 FvH4_4g08730 FvH4_5g31160 FvH4_5g31160 FvH4_5g31160 FvH4_5g31160 FvH4_5g31160
malus_domestica MD03G1191000.v1.1 MD11G1207800.v1.1 MD11G1208000.v1.1
prunus_persica Prupe.4G227500_v2.0.a1 Prupe.4G227500_v2.0.a1 Prupe.4G227500_v2.0.a1 Prupe.4G227500_v2.0.a1 Prupe.4G227500_v2.0.a1 Prupe.4G227500_v2.0.a1 Prupe.4G227600_v2.0.a1 Prupe.4G227700_v2.0.a1 Prupe.4G227800_v2.0.a1 Prupe.4G227800_v2.0.a1 Prupe.4G227800_v2.0.a1 Prupe.4G227800_v2.0.a1 Prupe.4G227800_v2.0.a1
pyrus_communis pycom01g03400 pycom03g14420 pycom11g18100 pycom11g18140 pycom11g18150 pycom11g18160
rosa_chinensis RchiOBHm_Chr2g0145981 RchiOBHm_Chr4g0405241 RchiOBHm_Chr4g0405271 RchiOBHm_Chr5g0016201 RchiOBHm_Chr5g0041831 RchiOBHm_Chr5g0041871 RchiOBHm_Chr5g0041881 RchiOBHm_Chr5g0059241
rosa_laevigata RLG00000002117 RLG00000008861 RLG00000008862 RLG00000011000 RLG00000033216 RLG00000034097 RLG00000034101
rosa_multiflora Rmu_sc0000161.1_g000001 Rmu_sc0000861.1_g000040 Rmu_sc0007522.1_g000003 Rmu_sc0009443.1_g000015 Rmu_sc0022129.1_g000001 Rmu_sc0042315.1_g000001
rosa_roxburghii Rroxscaffold_1G00038660 Rroxscaffold_1G00038690 Rroxscaffold_5G00349560 Rroxscaffold_5G00349610 Rroxscaffold_6G00388370 Rroxscaffold_7G00188740
rosa_rugosa Rorug03G0199700 Rorug04G0055400 Rorug04G0055500 Rorug04G0055900 Rorug04G0056000 Rorug04G0056100 Rorug04G0056100 Rorug04G0056200 Rorug05G0195600 Rorug05G0195700 Rorug05G0195800 Rorug05G0195900 Rorug05G0196800 Rorug05G0385000
rosa_samantha Rh4AG129900 Rh4AG130100 Rh4BG124200 Rh4BG124400 Rh4BG124500 Rh4CG137200 Rh4CG137300 Rh4DG123500 Rh4DG123700 Rh5AG280800 Rh5AG281400 Rh5BG286700 Rh5BG287000 Rh5BG397800 Rh5CG318100 Rh5CG318600 Rh5CG421600 Rh5DG132300 Rh5DG132400 Rh5DG295400 Rh5DG295700 Rh7BG475300
rosa_wichuraiana Rw0G001330 Rw0G005730 Rw4G008670 Rw4G010510 Rw4G010540 Rw5G026450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1602, 2073
AarI CACCTGC 1 cut(s) 1588
Acc36I ACCTGC 1 cut(s) 1588
AccB1I GGYRCC 1 cut(s) 1088
AciI CCGC 2 cut(s) 387, 433
AclWI GGATC 5 cut(s) 393, 406, 602, 2124, 2137
AcsI RAATTY 5 cut(s) 534, 896, 1016, 2062, 2348
AcuI CTGAAG 5 cut(s) 399, 537, 1032, 1082, 1575
AcyI GRCGYC 1 cut(s) 1089
AdeI CACNNNGTG 1 cut(s) 1073
AfaI GTAC 4 cut(s) 831, 1113, 1552, 1727
AfiI CCNNNNNNNGG 3 cut(s) 618, 657, 1952
AflIII ACRYGT 1 cut(s) 557
AjnI CCWGG 3 cut(s) 312, 2125, 2266
AluBI AGCT 8 cut(s) 223, 394, 523, 1060, 1349, 1801, 1967, 2234
AluI AGCT 8 cut(s) 223, 394, 523, 1060, 1349, 1801, 1967, 2234
Alw21I GWGCWC 1 cut(s) 1579
Alw26I GTCTC 2 cut(s) 63, 1802
Alw44I GTGCAC 1 cut(s) 1575
AlwI GGATC 5 cut(s) 393, 406, 602, 2124, 2137
AlwNI CAGNNNCTG 3 cut(s) 422, 1060, 2101
Ama87I CYCGRG 4 cut(s) 50, 611, 1997, 2235
AoxI GGCC 1 cut(s) 2174
ApaLI GTGCAC 1 cut(s) 1575
ApeKI GCWGC 5 cut(s) 231, 576, 953, 1323, 1964
ApoI RAATTY 5 cut(s) 534, 896, 1016, 2062, 2348
ArsI GACNNNNNNTTYG 2 cut(s) 1608, 1640
Asp700I GAANNNNTTC 1 cut(s) 1862
AspLEI GCGC 3 cut(s) 1091, 1328, 1656
AspS9I GGNCC 2 cut(s) 252, 886
AsuC2I CCSGG 1 cut(s) 111
AsuHPI GGTGA 6 cut(s) 1059, 1153, 1223, 1240, 1289, 2253
AsuII TTCGAA 1 cut(s) 1516
AvaI CYCGRG 4 cut(s) 50, 611, 1997, 2235
AvaII GGWCC 2 cut(s) 252, 886
AxyI CCTNAGG 1 cut(s) 248
BaeGI GKGCMC 2 cut(s) 1579, 2250
BaeI ACNNNNGTAYC 2 cut(s) 1734, 1767
BamHI GGATCC 2 cut(s) 398, 2129
BanI GGYRCC 1 cut(s) 1088
BarI GAAGNNNNNNTAC 2 cut(s) 1811, 1843
BbsI GAAGAC 6 cut(s) 17, 162, 421, 777, 926, 1383
Bbv12I GWGCWC 1 cut(s) 1579
BbvCI CCTCAGC 2 cut(s) 423, 1188
BbvI GCAGC 5 cut(s) 218, 563, 965, 1335, 1976
BccI CCATC 5 cut(s) 107, 474, 803, 1015, 1268
BceAI ACGGC 2 cut(s) 1536, 2184
BciT130I CCWGG 3 cut(s) 314, 2127, 2268
BciVI GTATCC 1 cut(s) 277
BclI TGATCA 3 cut(s) 124, 1929, 2137
BcnI CCSGG 1 cut(s) 111
BcoDI GTCTC 2 cut(s) 63, 1802
BfaI CTAG 4 cut(s) 288, 395, 1535, 2322
BfmI CTRYAG 2 cut(s) 1021, 2229
BfoI RGCGCY 1 cut(s) 1092
BfuAI ACCTGC 1 cut(s) 1588
BfuI GTATCC 1 cut(s) 277
BisI GCNGC 5 cut(s) 232, 577, 954, 1324, 1965
BlsI GCNGC 5 cut(s) 233, 578, 955, 1325, 1966
BmcAI AGTACT 1 cut(s) 1552
Bme1390I CCNGG 4 cut(s) 111, 314, 2127, 2268
Bme18I GGWCC 2 cut(s) 252, 886
BmeT110I CYCGRG 4 cut(s) 50, 611, 1997, 2235
BmgT120I GGNCC 2 cut(s) 252, 886
BmiI GGNNCC 6 cut(s) 400, 887, 1090, 1718, 2131, 2198
BmrFI CCNGG 4 cut(s) 111, 314, 2127, 2268
BmsI GCATC 8 cut(s) 233, 316, 321, 379, 1372, 1535, 1791, 2267
BpiI GAAGAC 6 cut(s) 17, 162, 421, 777, 926, 1383
BplI GAGNNNNNCTC 4 cut(s) 1271, 1303, 2164, 2196
Bpu10I CCTNAGC 2 cut(s) 423, 1188
Bpu14I TTCGAA 1 cut(s) 1516
BpuEI CTTGAG 2 cut(s) 545, 1526
BpuMI CCSGG 1 cut(s) 111
Bsa29I ATCGAT 1 cut(s) 61
BsaAI YACGTR 2 cut(s) 558, 1729
BsaHI GRCGYC 1 cut(s) 1089
BsaJI CCNNGG 6 cut(s) 84, 312, 1182, 2009, 2125, 2267
Bsc4I CCNNNNNNNGG 3 cut(s) 618, 657, 1952
Bse1I ACTGG 1 cut(s) 928
Bse21I CCTNAGG 1 cut(s) 248
Bse3DI GCAATG 1 cut(s) 2283
BseBI CCWGG 3 cut(s) 314, 2127, 2268
BseCI ATCGAT 1 cut(s) 61
BseDI CCNNGG 6 cut(s) 84, 312, 1182, 2009, 2125, 2267
BseGI GGATG 6 cut(s) 322, 466, 814, 1550, 1893, 2095
BseLI CCNNNNNNNGG 3 cut(s) 618, 657, 1952
BseMI GCAATG 1 cut(s) 2283
BseMII CTCAG 5 cut(s) 414, 1179, 1230, 1610, 2208
BseNI ACTGG 1 cut(s) 928
BseRI GAGGAG 1 cut(s) 1919
BseSI GKGCMC 2 cut(s) 1579, 2250
BseXI GCAGC 5 cut(s) 218, 563, 965, 1335, 1976
BsgI GTGCAG 1 cut(s) 2288
BshFI GGCC 1 cut(s) 2176
BshNI GGYRCC 1 cut(s) 1088
BshVI ATCGAT 1 cut(s) 61
BsiHKAI GWGCWC 1 cut(s) 1579
BsiHKCI CYCGRG 4 cut(s) 50, 611, 1997, 2235
BsiSI CCGG 1 cut(s) 111
BslFI GGGAC 1 cut(s) 899
BslI CCNNNNNNNGG 3 cut(s) 618, 657, 1952
BsmAI GTCTC 2 cut(s) 63, 1802
BsmBI CGTCTC 2 cut(s) 63, 1802
BsmFI GGGAC 1 cut(s) 899
BsmI GAATGC 1 cut(s) 1656
BsnI GGCC 1 cut(s) 2176
BsoBI CYCGRG 4 cut(s) 50, 611, 1997, 2235
Bsp119I TTCGAA 1 cut(s) 1516
Bsp1286I GDGCHC 2 cut(s) 1579, 2250
Bsp143I GATC 7 cut(s) 62, 124, 398, 607, 1929, 2129, 2137
BspACI CCGC 2 cut(s) 387, 433
BspANI GGCC 1 cut(s) 2176
BspCNI CTCAG 5 cut(s) 415, 1180, 1231, 1611, 2209
BspDI ATCGAT 1 cut(s) 61
BspHI TCATGA 1 cut(s) 2275
BspLI GGNNCC 6 cut(s) 400, 887, 1090, 1718, 2131, 2198
BspMI ACCTGC 1 cut(s) 1588
BspPI GGATC 5 cut(s) 393, 406, 602, 2124, 2137
BspQI GCTCTTC 1 cut(s) 513
BspT104I TTCGAA 1 cut(s) 1516
BspT107I GGYRCC 1 cut(s) 1088
BsrDI GCAATG 1 cut(s) 2283
BsrI ACTGG 1 cut(s) 928
BssECI CCNNGG 6 cut(s) 84, 312, 1182, 2009, 2125, 2267
BssMI GATC 7 cut(s) 62, 124, 398, 607, 1929, 2129, 2137
BssNI GRCGYC 1 cut(s) 1089
BssT1I CCWWGG 2 cut(s) 84, 2009
Bst2UI CCWGG 3 cut(s) 314, 2127, 2268
Bst4CI ACNGT 4 cut(s) 356, 476, 827, 1894
BstACI GRCGYC 1 cut(s) 1089
BstAPI GCANNNNNTGC 1 cut(s) 1651
BstBAI YACGTR 2 cut(s) 558, 1729
BstBI TTCGAA 1 cut(s) 1516
BstC8I GCNNGC 3 cut(s) 221, 385, 1093
BstDEI CTNAG 6 cut(s) 248, 423, 1188, 1239, 1619, 2217
BstDSI CCRYGG 1 cut(s) 1182
BstENI CCTNNNNNAGG 1 cut(s) 655
BstF5I GGATG 6 cut(s) 322, 466, 814, 1550, 1893, 2095
BstH2I RGCGCY 1 cut(s) 1092
BstHHI GCGC 3 cut(s) 1091, 1328, 1656
BstKTI GATC 7 cut(s) 65, 127, 401, 610, 1932, 2132, 2140
BstMAI GTCTC 2 cut(s) 63, 1802
BstMBI GATC 7 cut(s) 62, 124, 398, 607, 1929, 2129, 2137
BstMWI GCNNNNNNNGC 4 cut(s) 384, 1574, 1651, 1970
BstNI CCWGG 3 cut(s) 314, 2127, 2268
BstSCI CCNGG 4 cut(s) 109, 312, 2125, 2266
BstSFI CTRYAG 2 cut(s) 1021, 2229
BstSLI GKGCMC 2 cut(s) 1579, 2250
BstSNI TACGTA 1 cut(s) 1729
BstV1I GCAGC 5 cut(s) 218, 563, 965, 1335, 1976
BstV2I GAAGAC 6 cut(s) 17, 162, 421, 777, 926, 1383
BstX2I RGATCY 3 cut(s) 398, 607, 2129
BstYI RGATCY 3 cut(s) 398, 607, 2129
Bsu15I ATCGAT 1 cut(s) 61
Bsu36I CCTNAGG 1 cut(s) 248
BsuI GTATCC 1 cut(s) 277
BsuRI GGCC 1 cut(s) 2176
BsuTUI ATCGAT 1 cut(s) 61
BtgI CCRYGG 1 cut(s) 1182
BtgZI GCGATG 2 cut(s) 344, 1598
BtsCI GGATG 6 cut(s) 322, 466, 814, 1550, 1893, 2095
BtsI GCAGTG 1 cut(s) 2168
BtsIMutI CAGTG 3 cut(s) 380, 472, 2168
BveI ACCTGC 1 cut(s) 1588
Cac8I GCNNGC 3 cut(s) 221, 385, 1093
CaiI CAGNNNCTG 3 cut(s) 422, 1060, 2101
CciI TCATGA 1 cut(s) 2275
CfoI GCGC 3 cut(s) 1091, 1328, 1656
Cfr13I GGNCC 2 cut(s) 252, 886
ClaI ATCGAT 1 cut(s) 61
Csp6I GTAC 4 cut(s) 830, 1112, 1551, 1726
CviAII CATG 7 cut(s) 260, 275, 851, 1646, 1933, 2243, 2276
CviQI GTAC 4 cut(s) 830, 1112, 1551, 1726
DdeI CTNAG 6 cut(s) 248, 423, 1188, 1239, 1619, 2217
DinI GGCGCC 1 cut(s) 1090
DpnI GATC 7 cut(s) 64, 126, 400, 609, 1931, 2131, 2139
DpnII GATC 7 cut(s) 62, 124, 398, 607, 1929, 2129, 2137
DraIII CACNNNGTG 1 cut(s) 1073
Eco105I TACGTA 1 cut(s) 1729
Eco130I CCWWGG 2 cut(s) 84, 2009
Eco47I GGWCC 2 cut(s) 252, 886
Eco57I CTGAAG 5 cut(s) 399, 537, 1032, 1082, 1575
Eco81I CCTNAGG 1 cut(s) 248
Eco88I CYCGRG 4 cut(s) 50, 611, 1997, 2235
EcoNI CCTNNNNNAGG 1 cut(s) 655
EcoO109I RGGNCCY 1 cut(s) 252
EcoRI GAATTC 2 cut(s) 1016, 2062
EcoRII CCWGG 3 cut(s) 312, 2125, 2266
EcoT14I CCWWGG 2 cut(s) 84, 2009
EcoT22I ATGCAT 1 cut(s) 1447
EgeI GGCGCC 1 cut(s) 1090
EheI GGCGCC 1 cut(s) 1090
ErhI CCWWGG 2 cut(s) 84, 2009
Esp3I CGTCTC 2 cut(s) 63, 1802
FaeI CATG 7 cut(s) 263, 278, 854, 1649, 1936, 2246, 2279
FalI AAGNNNNNCTT 4 cut(s) 1488, 1520, 1808, 1840
FaqI GGGAC 1 cut(s) 899
FatI CATG 7 cut(s) 259, 274, 850, 1645, 1932, 2242, 2275
FauI CCCGC 1 cut(s) 380
FbaI TGATCA 3 cut(s) 124, 1929, 2137
Fnu4HI GCNGC 5 cut(s) 232, 577, 954, 1324, 1965
FokI GGATG 6 cut(s) 329, 453, 821, 1557, 1900, 2102
Fsp4HI GCNGC 5 cut(s) 232, 577, 954, 1324, 1965
FspBI CTAG 4 cut(s) 288, 395, 1535, 2322
GlaI GCGC 3 cut(s) 1090, 1327, 1655
GluI GCNGC 5 cut(s) 232, 577, 954, 1324, 1965
HaeII RGCGCY 1 cut(s) 1092
HaeIII GGCC 1 cut(s) 2176
HapII CCGG 1 cut(s) 111
HhaI GCGC 3 cut(s) 1091, 1328, 1656
Hin1I GRCGYC 1 cut(s) 1089
Hin1II CATG 7 cut(s) 263, 278, 854, 1649, 1936, 2246, 2279
Hin6I GCGC 3 cut(s) 1089, 1326, 1654
HinP1I GCGC 3 cut(s) 1089, 1326, 1654
HincII GTYRAC 1 cut(s) 910
HindII GTYRAC 1 cut(s) 910
HindIII AAGCTT 1 cut(s) 1799
HinfI GANTC 7 cut(s) 161, 188, 296, 548, 959, 1623, 2014
HpaI GTTAAC 1 cut(s) 910
HpaII CCGG 1 cut(s) 111
HphI GGTGA 6 cut(s) 1059, 1153, 1223, 1240, 1289, 2253
Hpy166II GTNNAC 6 cut(s) 587, 830, 910, 1268, 1577, 1753
Hpy188I TCNGA 5 cut(s) 406, 1012, 1240, 1955, 2142
Hpy8I GTNNAC 6 cut(s) 587, 830, 910, 1268, 1577, 1753
Hpy99I CGWCG 1 cut(s) 24
HpyAV CCTTC 9 cut(s) 230, 1013, 1131, 1225, 1344, 1443, 1490, 1535, 1678
HpyCH4III ACNGT 4 cut(s) 356, 476, 827, 1894
HpyCH4IV ACGT 2 cut(s) 557, 1728
HpyF10VI GCNNNNNNNGC 4 cut(s) 384, 1574, 1651, 1970
HpyF3I CTNAG 6 cut(s) 248, 423, 1188, 1239, 1619, 2217
HpySE526I ACGT 2 cut(s) 557, 1728
Hsp92I GRCGYC 1 cut(s) 1089
Hsp92II CATG 7 cut(s) 263, 278, 854, 1649, 1936, 2246, 2279
HspAI GCGC 3 cut(s) 1089, 1326, 1654
KasI GGCGCC 1 cut(s) 1088
Ksp22I TGATCA 3 cut(s) 124, 1929, 2137
KspAI GTTAAC 1 cut(s) 910
Kzo9I GATC 7 cut(s) 62, 124, 398, 607, 1929, 2129, 2137
LguI GCTCTTC 1 cut(s) 513
LmnI GCTCC 3 cut(s) 1722, 2158, 2196
Lsp1109I GCAGC 5 cut(s) 218, 563, 965, 1335, 1976
LweI GCATC 8 cut(s) 233, 316, 321, 379, 1372, 1535, 1791, 2267
MaeI CTAG 4 cut(s) 288, 395, 1535, 2322
MaeII ACGT 2 cut(s) 557, 1728
MaeIII GTNAC 7 cut(s) 508, 985, 1065, 1283, 1524, 1908, 1920
MalI GATC 7 cut(s) 64, 126, 400, 609, 1931, 2131, 2139
MboI GATC 7 cut(s) 62, 124, 398, 607, 1929, 2129, 2137
MflI RGATCY 3 cut(s) 398, 607, 2129
MhlI GDGCHC 2 cut(s) 1579, 2250
Mly113I GGCGCC 1 cut(s) 1089
MlyI GAGTC 3 cut(s) 170, 968, 1632
Mph1103I ATGCAT 1 cut(s) 1447
MroXI GAANNNNTTC 1 cut(s) 1862
MslI CAYNNNNRTG 1 cut(s) 1787
MspA1I CMGCKG 1 cut(s) 435
MspI CCGG 1 cut(s) 111
MspR9I CCNGG 4 cut(s) 111, 314, 2127, 2268
Mva1269I GAATGC 1 cut(s) 1656
MvaI CCWGG 3 cut(s) 314, 2127, 2268
MwoI GCNNNNNNNGC 4 cut(s) 384, 1574, 1651, 1970
NarI GGCGCC 1 cut(s) 1089
NciI CCSGG 1 cut(s) 111
NdeII GATC 7 cut(s) 62, 124, 398, 607, 1929, 2129, 2137
NlaIII CATG 7 cut(s) 263, 278, 854, 1649, 1936, 2246, 2279
NlaIV GGNNCC 6 cut(s) 400, 887, 1090, 1718, 2131, 2198
NmeAIII GCCGAG 1 cut(s) 1268
NmuCI GTSAC 2 cut(s) 1065, 1920
NsiI ATGCAT 1 cut(s) 1447
NspV TTCGAA 1 cut(s) 1516
PaeR7I CTCGAG 3 cut(s) 50, 1997, 2235
PagI TCATGA 1 cut(s) 2275
PaqCI CACCTGC 1 cut(s) 1588
PciSI GCTCTTC 1 cut(s) 513
PctI GAATGC 1 cut(s) 1656
PdmI GAANNNNTTC 1 cut(s) 1862
PfeI GAWTC 4 cut(s) 188, 296, 548, 2014
PflFI GACNNNGTC 1 cut(s) 1918
PkrI GCNGC 5 cut(s) 233, 578, 955, 1325, 1966
PleI GAGTC 3 cut(s) 169, 967, 1631
PluTI GGCGCC 1 cut(s) 1092
PpsI GAGTC 3 cut(s) 169, 967, 1631
Ppu21I YACGTR 2 cut(s) 558, 1729
PpuMI RGGWCCY 1 cut(s) 252
PsiI TTATAA 2 cut(s) 1602, 2073
Psp5II RGGWCCY 1 cut(s) 252
Psp6I CCWGG 3 cut(s) 312, 2125, 2266
PspGI CCWGG 3 cut(s) 312, 2125, 2266
PspN4I GGNNCC 6 cut(s) 400, 887, 1090, 1718, 2131, 2198
PspPI GGNCC 2 cut(s) 252, 886
PspPPI RGGWCCY 1 cut(s) 252
PspXI VCTCGAGB 1 cut(s) 50
PstNI CAGNNNCTG 3 cut(s) 422, 1060, 2101
PsuI RGATCY 3 cut(s) 398, 607, 2129
PsyI GACNNNGTC 1 cut(s) 1918
RsaI GTAC 4 cut(s) 831, 1113, 1552, 1727
RsaNI GTAC 4 cut(s) 830, 1112, 1551, 1726
RseI CAYNNNNRTG 1 cut(s) 1787
SapI GCTCTTC 1 cut(s) 513
SatI GCNGC 5 cut(s) 232, 577, 954, 1324, 1965
Sau3AI GATC 7 cut(s) 62, 124, 398, 607, 1929, 2129, 2137
Sau96I GGNCC 2 cut(s) 252, 886
ScaI AGTACT 1 cut(s) 1552
SchI GAGTC 3 cut(s) 170, 968, 1632
ScrFI CCNGG 4 cut(s) 111, 314, 2127, 2268
SduI GDGCHC 2 cut(s) 1579, 2250
SfaNI GCATC 8 cut(s) 233, 316, 321, 379, 1372, 1535, 1791, 2267
SfcI CTRYAG 2 cut(s) 1021, 2229
SfoI GGCGCC 1 cut(s) 1090
Sfr274I CTCGAG 3 cut(s) 50, 1997, 2235
SfuI TTCGAA 1 cut(s) 1516
SinI GGWCC 2 cut(s) 252, 886
SlaI CTCGAG 3 cut(s) 50, 1997, 2235
SmiMI CAYNNNNRTG 1 cut(s) 1787
SmlI CTYRAG 5 cut(s) 50, 524, 1505, 1997, 2235
SmoI CTYRAG 5 cut(s) 50, 524, 1505, 1997, 2235
SnaBI TACGTA 1 cut(s) 1729
SsiI CCGC 2 cut(s) 387, 433
SspDI GGCGCC 1 cut(s) 1088
SspMI CTAG 4 cut(s) 288, 395, 1535, 2322
StyD4I CCNGG 4 cut(s) 109, 312, 2125, 2266
StyI CCWWGG 2 cut(s) 84, 2009
TaaI ACNGT 4 cut(s) 356, 476, 827, 1894
TaiI ACGT 2 cut(s) 560, 1731
TaqI TCGA 9 cut(s) 51, 61, 102, 1125, 1436, 1516, 1986, 1998, 2236
TatI WGTACW 2 cut(s) 829, 1550
TfiI GAWTC 4 cut(s) 188, 296, 548, 2014
TscAI CASTG 3 cut(s) 380, 479, 2168
TseFI GTSAC 2 cut(s) 1065, 1920
TseI GCWGC 5 cut(s) 231, 576, 953, 1323, 1964
Tsp45I GTSAC 2 cut(s) 1065, 1920
TspGWI ACGGA 5 cut(s) 952, 1171, 1543, 1927, 2122
TspRI CASTG 3 cut(s) 380, 479, 2168
Tth111I GACNNNGTC 1 cut(s) 1918
VneI GTGCAC 1 cut(s) 1575
VpaK11BI GGWCC 2 cut(s) 252, 886
XagI CCTNNNNNAGG 1 cut(s) 655
XapI RAATTY 5 cut(s) 534, 896, 1016, 2062, 2348
XcmI CCANNNNNNNNNTGG 2 cut(s) 1462, 2190
XhoI CTCGAG 3 cut(s) 50, 1997, 2235
XmnI GAANNNNTTC 1 cut(s) 1862
XspI CTAG 4 cut(s) 288, 395, 1535, 2322
ZrmI AGTACT 1 cut(s) 1552
Zsp2I ATGCAT 1 cut(s) 1447
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.