Rorug04G0056000

metal ion binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0000343
Physical Location & Seq
Reverse (-)
8831911 .. 8834087
2177 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0056000.1

Sequence Viewer

Length: 1092 bp
ATGCCTGTTGGATTAGCTACACAACGTTTGTTGTATACCTTGTTTCTGTATGCATGTTTGTTCCTAAAGACTGATCTATCTGGGGCTTTGCCTCTCCAGAGAAAATATGTACCTGTAAAGAAAAATGCGGAGAGTCTTCAGTACACGGCCGTGGATGTACACGGCGCATGTGCTGGGCACGTGATATCAAAGTTGATGAACGGCGTTAGTGAATTGGGGTTAGTGAACAAGAAAAATGCGGAAGAATGCAGTAAAACAAAGTTTTACCAAACACCTTCGAATTCTATCTGGACCCTCTCTGCCCTCCTCCTGCTTCCTCGGCTTCTTCCTCAAGCGCTCTTAGCGACGCACCTCGCCTCTCCACTTCTCGCGCATCTCGGCGGAGTTCCCGACTCCGATTCGTGGCAGCTCGGTCCTCCTCTCCCTCTCGCTAACCCCAATGTCATAGAAAGAATAGCACAAGTCTTCGCCTTTCATGGCGACCCTGCGACTCCTGCACGGTCCATCCTCCAACCGAAGCTAAACCCTCCCAAAGCCCTCCTCTCCATTCGAGATTCTTATGGCGGTGCACGGGTTTGGAAGAAATGCCAGCCCAGTGCTGTTAATATGTGCTCGTGGAGCTCAGCTGCTAGTTATGTGACACCTCCTGGTGGCGTTGCTAAGTTTTCTGGCAATCCCATTGTCGTGAAGCAGCAATTGTTGCAAACAGAGGCAAGTTATTATTGCCGCAGAATTGTACTCTCGGCTGTTGCGGAATTGTTGTTGATGTTAGCTGGAACTGTAAGGGGTGCTACTATTGAAGAAATAGAAGCGGAGAAGTCTGTGATTGAAAAAGATGCTAAAGGCAGGATGGAAAAGACTATTGAAACGGTACGATCCAATTTCAATTCTATTCGGACAGGGAGAGCAAGCCCAGCCATGCTGGGCAAGATTGAGGTTGACTATTATGGAAGTCCAGTTGGCTTGAAGAGCCTTGCTCAAATTAGTTCTCCTGATGGAACTTCCCTATTGCTTTCGCCATACGACAAATCCAGCTTAAAGTCTATTGAGAAGGCCATAGTTGCCTCTGATCTTGGCATGGACTCCAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006325 GO:0006355 GO:0006950 GO:0006952 GO:0006996 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0009605 GO:0009607 GO:0009620 GO:0009791 GO:0009889 GO:0009893 GO:0009909 GO:0009911 GO:0009987 GO:0010228 GO:0010468 GO:0010556 GO:0010604 GO:0010638 GO:0016043 GO:0019219 GO:0019222 GO:0022414 GO:0023052 GO:0030154 GO:0031056 GO:0031058 GO:0031060 GO:0031062 GO:0031323 GO:0031325 GO:0031326 GO:0031399 GO:0031401 GO:0031440 GO:0031935 GO:0031937 GO:0032268 GO:0032270 GO:0032501 GO:0032502 GO:0033043 GO:0033044 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0043954 GO:0044030 GO:0044424 GO:0044464 GO:0048366 GO:0048367 GO:0048468 GO:0048518 GO:0048522 GO:0048580 GO:0048582 GO:0048608 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0048869 GO:0050684 GO:0050789 GO:0050793 GO:0050794 GO:0050832 GO:0050896 GO:0051052 GO:0051094 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051239 GO:0051240 GO:0051246 GO:0051247 GO:0051252 GO:0051276 GO:0051570 GO:0051574 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0060968 GO:0061085 GO:0061087 GO:0061458 GO:0065007 GO:0070827 GO:0070828 GO:0070829 GO:0071840 GO:0080090 GO:0090436 GO:0097159 GO:0098542 GO:0099402 GO:0140110 GO:1900109 GO:1900111 GO:1900363 GO:1901363 GO:1902275 GO:1903311 GO:1903506 GO:1905269 GO:2000024 GO:2000026 GO:2000112 GO:2000241 GO:2000243 GO:2001141 GO:2001252
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DNMT1-RFD

Protein Analysis

363

Amino Acids

39.09

Weight (kDa)

9.29

Isoelectric Point (pI)

50.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRF PF01765 292 - 361 3.3e-22 Ribosome recycling factor
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000343)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48090 AT5G48090 AT5G48090 AT5G55390 AT5G55390 AT5G55390
fragaria_vesca FvH4_3g23690 FvH4_4g08730 FvH4_4g08730 FvH4_4g08730 FvH4_4g08730 FvH4_4g08730 FvH4_4g08730 FvH4_5g31160 FvH4_5g31160 FvH4_5g31160 FvH4_5g31160 FvH4_5g31160
malus_domestica MD03G1191000.v1.1 MD11G1207800.v1.1 MD11G1208000.v1.1
prunus_persica Prupe.4G227500_v2.0.a1 Prupe.4G227500_v2.0.a1 Prupe.4G227500_v2.0.a1 Prupe.4G227500_v2.0.a1 Prupe.4G227500_v2.0.a1 Prupe.4G227500_v2.0.a1 Prupe.4G227600_v2.0.a1 Prupe.4G227700_v2.0.a1 Prupe.4G227800_v2.0.a1 Prupe.4G227800_v2.0.a1 Prupe.4G227800_v2.0.a1 Prupe.4G227800_v2.0.a1 Prupe.4G227800_v2.0.a1
pyrus_communis pycom01g03400 pycom03g14420 pycom11g18100 pycom11g18140 pycom11g18150 pycom11g18160
rosa_chinensis RchiOBHm_Chr2g0145981 RchiOBHm_Chr4g0405241 RchiOBHm_Chr4g0405271 RchiOBHm_Chr5g0016201 RchiOBHm_Chr5g0041831 RchiOBHm_Chr5g0041871 RchiOBHm_Chr5g0041881 RchiOBHm_Chr5g0059241
rosa_laevigata RLG00000002117 RLG00000008861 RLG00000008862 RLG00000011000 RLG00000033216 RLG00000034097 RLG00000034101
rosa_multiflora Rmu_sc0000161.1_g000001 Rmu_sc0000861.1_g000040 Rmu_sc0007522.1_g000003 Rmu_sc0009443.1_g000015 Rmu_sc0022129.1_g000001 Rmu_sc0042315.1_g000001
rosa_roxburghii Rroxscaffold_1G00038660 Rroxscaffold_1G00038690 Rroxscaffold_5G00349560 Rroxscaffold_5G00349610 Rroxscaffold_6G00388370 Rroxscaffold_7G00188740
rosa_rugosa Rorug03G0199700 Rorug04G0055400 Rorug04G0055500 Rorug04G0055900 Rorug04G0056000 Rorug04G0056100 Rorug04G0056100 Rorug04G0056200 Rorug05G0195600 Rorug05G0195700 Rorug05G0195800 Rorug05G0195900 Rorug05G0196800 Rorug05G0385000
rosa_samantha Rh4AG129900 Rh4AG130100 Rh4BG124200 Rh4BG124400 Rh4BG124500 Rh4CG137200 Rh4CG137300 Rh4DG123500 Rh4DG123700 Rh5AG280800 Rh5AG281400 Rh5BG286700 Rh5BG287000 Rh5BG397800 Rh5CG318100 Rh5CG318600 Rh5CG421600 Rh5DG132300 Rh5DG132400 Rh5DG295400 Rh5DG295700 Rh7BG475300
rosa_wichuraiana Rw0G001330 Rw0G005730 Rw4G008670 Rw4G010510 Rw4G010540 Rw5G026450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 35
AccII CGCG 1 cut(s) 371
AciI CCGC 7 cut(s) 128, 239, 381, 564, 727, 752, 812
AclI AACGTT 1 cut(s) 25
AclWI GGATC 1 cut(s) 870
AcoI YGGCCR 1 cut(s) 147
AcsI RAATTY 1 cut(s) 280
AcuI CTGAAG 1 cut(s) 122
AcvI CACGTG 1 cut(s) 181
AfaI GTAC 5 cut(s) 111, 143, 159, 738, 873
AfeI AGCGCT 1 cut(s) 336
AfiI CCNNNNNNNGG 2 cut(s) 402, 650
AgsI TTSAA 5 cut(s) 800, 830, 866, 886, 967
AjnI CCWGG 1 cut(s) 646
AleI CACNNNNGTG 1 cut(s) 149
AluBI AGCT 7 cut(s) 17, 409, 520, 621, 626, 773, 1035
AluI AGCT 7 cut(s) 17, 409, 520, 621, 626, 773, 1035
Alw21I GWGCWC 3 cut(s) 571, 614, 623
Alw44I GTGCAC 1 cut(s) 567
AlwI GGATC 1 cut(s) 870
Aor51HI AGCGCT 1 cut(s) 336
AoxI GGCC 2 cut(s) 147, 1053
ApaLI GTGCAC 1 cut(s) 567
ApeKI GCWGC 3 cut(s) 406, 626, 691
ApoI RAATTY 1 cut(s) 280
AspLEI GCGC 3 cut(s) 167, 337, 373
AspS9I GGNCC 3 cut(s) 291, 413, 501
AsuII TTCGAA 1 cut(s) 278
AvaII GGWCC 3 cut(s) 291, 413, 501
BaeGI GKGCMC 2 cut(s) 180, 571
BanII GRGCYC 1 cut(s) 623
BauI CACGAG 1 cut(s) 613
BbrPI CACGTG 1 cut(s) 181
BbsI GAAGAC 2 cut(s) 128, 457
Bbv12I GWGCWC 3 cut(s) 571, 614, 623
BbvI GCAGC 3 cut(s) 418, 613, 703
BccI CCATC 3 cut(s) 512, 844, 989
BceAI ACGGC 4 cut(s) 134, 162, 178, 217
BciT130I CCWGG 1 cut(s) 648
BfaI CTAG 1 cut(s) 630
BfoI RGCGCY 1 cut(s) 338
BisI GCNGC 4 cut(s) 407, 627, 692, 727
BlpI GCTNAGC 1 cut(s) 622
BlsI GCNGC 4 cut(s) 408, 628, 693, 728
Bme1390I CCNGG 1 cut(s) 648
Bme18I GGWCC 3 cut(s) 291, 413, 501
BmgT120I GGNCC 3 cut(s) 291, 413, 501
BmiI GGNNCC 1 cut(s) 293
BmrFI CCNGG 1 cut(s) 648
BmrI ACTGGG 1 cut(s) 588
BmsI GCATC 2 cut(s) 382, 826
BmuI ACTGGG 1 cut(s) 588
BpiI GAAGAC 2 cut(s) 128, 457
BplI GAGNNNNNCTC 2 cut(s) 961, 993
BpmI CTGGAG 1 cut(s) 80
Bpu1102I GCTNAGC 1 cut(s) 622
Bpu14I TTCGAA 1 cut(s) 278
BpuEI CTTGAG 1 cut(s) 315
BsaAI YACGTR 1 cut(s) 181
BsaJI CCNNGG 2 cut(s) 150, 317
Bsc4I CCNNNNNNNGG 2 cut(s) 402, 650
Bse1I ACTGG 2 cut(s) 594, 956
BseBI CCWGG 1 cut(s) 648
BseDI CCNNGG 2 cut(s) 150, 317
BseGI GGATG 3 cut(s) 160, 504, 855
BseLI CCNNNNNNNGG 2 cut(s) 402, 650
BseMII CTCAG 1 cut(s) 636
BseNI ACTGG 2 cut(s) 594, 956
BseRI GAGGAG 3 cut(s) 296, 408, 530
BseSI GKGCMC 2 cut(s) 180, 571
BseX3I CGGCCG 1 cut(s) 147
BseXI GCAGC 3 cut(s) 418, 613, 703
BseYI CCCAGC 3 cut(s) 173, 913, 922
BsgI GTGCAG 1 cut(s) 480
Bsh1236I CGCG 1 cut(s) 371
Bsh1285I CGRYCG 1 cut(s) 150
BshFI GGCC 2 cut(s) 149, 1055
BsiEI CGRYCG 1 cut(s) 150
BsiHKAI GWGCWC 3 cut(s) 571, 614, 623
BslI CCNNNNNNNGG 2 cut(s) 402, 650
BsmI GAATGC 1 cut(s) 251
BsnI GGCC 2 cut(s) 149, 1055
Bsp119I TTCGAA 1 cut(s) 278
Bsp1286I GDGCHC 4 cut(s) 180, 571, 614, 623
Bsp1407I TGTACA 1 cut(s) 157
Bsp143I GATC 3 cut(s) 73, 875, 1069
Bsp1720I GCTNAGC 1 cut(s) 622
BspACI CCGC 7 cut(s) 128, 239, 381, 564, 727, 752, 812
BspANI GGCC 2 cut(s) 149, 1055
BspCNI CTCAG 1 cut(s) 635
BspFNI CGCG 1 cut(s) 371
BspLI GGNNCC 1 cut(s) 293
BspPI GGATC 1 cut(s) 870
BspQI GCTCTTC 1 cut(s) 962
BspT104I TTCGAA 1 cut(s) 278
BsrGI TGTACA 1 cut(s) 157
BsrI ACTGG 2 cut(s) 594, 956
BssECI CCNNGG 2 cut(s) 150, 317
BssMI GATC 3 cut(s) 73, 875, 1069
BssNAI GTATAC 1 cut(s) 36
BssSI CACGAG 1 cut(s) 613
Bst1107I GTATAC 1 cut(s) 36
Bst2BI CACGAG 1 cut(s) 613
Bst2UI CCWGG 1 cut(s) 648
Bst4CI ACNGT 3 cut(s) 501, 781, 871
Bst6I CTCTTC 1 cut(s) 962
BstAPI GCANNNNNTGC 1 cut(s) 700
BstAUI TGTACA 1 cut(s) 157
BstBAI YACGTR 1 cut(s) 181
BstBI TTCGAA 1 cut(s) 278
BstC8I GCNNGC 2 cut(s) 590, 910
BstDEI CTNAG 3 cut(s) 340, 622, 660
BstDSI CCRYGG 1 cut(s) 150
BstF5I GGATG 3 cut(s) 160, 504, 855
BstFNI CGCG 1 cut(s) 371
BstH2I RGCGCY 1 cut(s) 338
BstHHI GCGC 3 cut(s) 167, 337, 373
BstKTI GATC 3 cut(s) 76, 878, 1072
BstMBI GATC 3 cut(s) 73, 875, 1069
BstMCI CGRYCG 1 cut(s) 150
BstMWI GCNNNNNNNGC 8 cut(s) 319, 341, 494, 618, 700, 914, 969, 1061
BstNI CCWGG 1 cut(s) 648
BstNSI RCATGY 2 cut(s) 57, 171
BstSCI CCNGG 1 cut(s) 646
BstSLI GKGCMC 2 cut(s) 180, 571
BstUI CGCG 1 cut(s) 371
BstV1I GCAGC 3 cut(s) 418, 613, 703
BstV2I GAAGAC 2 cut(s) 128, 457
BstZ17I GTATAC 1 cut(s) 36
BstZI CGGCCG 1 cut(s) 147
BsuRI GGCC 2 cut(s) 149, 1055
BtgI CCRYGG 1 cut(s) 150
BtsCI GGATG 3 cut(s) 160, 504, 855
BtsIMutI CAGTG 1 cut(s) 601
Cac8I GCNNGC 2 cut(s) 590, 910
CfoI GCGC 3 cut(s) 167, 337, 373
Cfr13I GGNCC 3 cut(s) 291, 413, 501
CseI GACGC 1 cut(s) 355
Csp6I GTAC 5 cut(s) 110, 142, 158, 737, 872
CviAII CATG 5 cut(s) 54, 168, 476, 919, 1078
CviQI GTAC 5 cut(s) 110, 142, 158, 737, 872
DdeI CTNAG 3 cut(s) 340, 622, 660
DpnI GATC 3 cut(s) 75, 877, 1071
DpnII GATC 3 cut(s) 73, 875, 1069
EaeI YGGCCR 1 cut(s) 147
EagI CGGCCG 1 cut(s) 147
Eam1104I CTCTTC 1 cut(s) 962
EarI CTCTTC 1 cut(s) 962
EciI GGCGGA 1 cut(s) 396
Ecl136II GAGCTC 1 cut(s) 621
EclXI CGGCCG 1 cut(s) 147
Eco24I GRGCYC 1 cut(s) 623
Eco32I GATATC 1 cut(s) 186
Eco47I GGWCC 3 cut(s) 291, 413, 501
Eco47III AGCGCT 1 cut(s) 336
Eco52I CGGCCG 1 cut(s) 147
Eco53kI GAGCTC 1 cut(s) 621
Eco57I CTGAAG 1 cut(s) 122
Eco72I CACGTG 1 cut(s) 181
EcoICRI GAGCTC 1 cut(s) 621
EcoRI GAATTC 1 cut(s) 280
EcoRII CCWGG 1 cut(s) 646
EcoRV GATATC 1 cut(s) 186
EcoT22I ATGCAT 1 cut(s) 55
EcoT38I GRGCYC 1 cut(s) 623
FaeI CATG 5 cut(s) 57, 171, 479, 922, 1081
FatI CATG 5 cut(s) 53, 167, 475, 918, 1077
FblI GTMKAC 1 cut(s) 35
Fnu4HI GCNGC 4 cut(s) 407, 627, 692, 727
FokI GGATG 3 cut(s) 167, 491, 862
FriOI GRGCYC 1 cut(s) 623
Fsp4HI GCNGC 4 cut(s) 407, 627, 692, 727
FspBI CTAG 1 cut(s) 630
GlaI GCGC 3 cut(s) 166, 336, 372
GluI GCNGC 4 cut(s) 407, 627, 692, 727
GsaI CCCAGC 3 cut(s) 177, 917, 926
GsuI CTGGAG 1 cut(s) 80
HaeII RGCGCY 1 cut(s) 338
HaeIII GGCC 2 cut(s) 149, 1055
HgaI GACGC 1 cut(s) 355
HhaI GCGC 3 cut(s) 167, 337, 373
Hin1II CATG 5 cut(s) 57, 171, 479, 922, 1081
Hin6I GCGC 3 cut(s) 165, 335, 371
HinP1I GCGC 3 cut(s) 165, 335, 371
HincII GTYRAC 1 cut(s) 940
HindII GTYRAC 1 cut(s) 940
HinfI GANTC 6 cut(s) 133, 392, 398, 490, 554, 1082
Hpy166II GTNNAC 6 cut(s) 36, 144, 160, 226, 569, 940
Hpy188I TCNGA 3 cut(s) 397, 897, 1069
Hpy188III TCNNGA 6 cut(s) 97, 289, 389, 551, 685, 992
Hpy8I GTNNAC 6 cut(s) 36, 144, 160, 226, 569, 940
Hpy99I CGWCG 1 cut(s) 349
HpyAV CCTTC 2 cut(s) 285, 1045
HpyCH4III ACNGT 3 cut(s) 501, 781, 871
HpyCH4IV ACGT 2 cut(s) 25, 180
HpyCH4V TGCA 5 cut(s) 53, 249, 497, 569, 703
HpyF10VI GCNNNNNNNGC 8 cut(s) 319, 341, 494, 618, 700, 914, 969, 1061
HpyF3I CTNAG 3 cut(s) 340, 622, 660
HpySE526I ACGT 2 cut(s) 25, 180
Hsp92II CATG 5 cut(s) 57, 171, 479, 922, 1081
HspAI GCGC 3 cut(s) 165, 335, 371
Kzo9I GATC 3 cut(s) 73, 875, 1069
LguI GCTCTTC 1 cut(s) 962
LmnI GCTCC 1 cut(s) 618
Lsp1109I GCAGC 3 cut(s) 418, 613, 703
LweI GCATC 2 cut(s) 382, 826
MaeI CTAG 1 cut(s) 630
MaeII ACGT 2 cut(s) 25, 180
MaeIII GTNAC 1 cut(s) 637
MalI GATC 3 cut(s) 75, 877, 1071
MboI GATC 3 cut(s) 73, 875, 1069
MboII GAAGA 7 cut(s) 128, 254, 317, 457, 592, 812, 979
MfeI CAATTG 1 cut(s) 695
MhlI GDGCHC 4 cut(s) 180, 571, 614, 623
MluCI AATT 8 cut(s) 212, 280, 695, 732, 755, 880, 886, 981
MlyI GAGTC 4 cut(s) 142, 386, 484, 1076
MmeI TCCRAC 1 cut(s) 535
Mph1103I ATGCAT 1 cut(s) 55
MseI TTAA 2 cut(s) 603, 1037
MslI CAYNNNNRTG 2 cut(s) 149, 683
MspA1I CMGCKG 1 cut(s) 626
MspR9I CCNGG 1 cut(s) 648
MunI CAATTG 1 cut(s) 695
Mva1269I GAATGC 1 cut(s) 251
MvaI CCWGG 1 cut(s) 648
MvnI CGCG 1 cut(s) 371
MwoI GCNNNNNNNGC 8 cut(s) 319, 341, 494, 618, 700, 914, 969, 1061
NdeII GATC 3 cut(s) 73, 875, 1069
NlaIII CATG 5 cut(s) 57, 171, 479, 922, 1081
NlaIV GGNNCC 1 cut(s) 293
NmeAIII GCCGAG 3 cut(s) 298, 357, 722
NmuCI GTSAC 1 cut(s) 637
NsiI ATGCAT 1 cut(s) 55
NspI RCATGY 2 cut(s) 57, 171
NspV TTCGAA 1 cut(s) 278
OliI CACNNNNGTG 1 cut(s) 149
PciSI GCTCTTC 1 cut(s) 962
PctI GAATGC 1 cut(s) 251
PfeI GAWTC 2 cut(s) 398, 554
PkrI GCNGC 4 cut(s) 408, 628, 693, 728
PleI GAGTC 4 cut(s) 141, 386, 484, 1076
PmaCI CACGTG 1 cut(s) 181
PmlI CACGTG 1 cut(s) 181
PpsI GAGTC 4 cut(s) 141, 386, 484, 1076
Ppu21I YACGTR 1 cut(s) 181
Psp124BI GAGCTC 1 cut(s) 623
Psp1406I AACGTT 1 cut(s) 25
Psp6I CCWGG 1 cut(s) 646
PspCI CACGTG 1 cut(s) 181
PspFI CCCAGC 3 cut(s) 173, 913, 922
PspGI CCWGG 1 cut(s) 646
PspN4I GGNNCC 1 cut(s) 293
PspPI GGNCC 3 cut(s) 291, 413, 501
PvuII CAGCTG 1 cut(s) 626
RsaI GTAC 5 cut(s) 111, 143, 159, 738, 873
RsaNI GTAC 5 cut(s) 110, 142, 158, 737, 872
RseI CAYNNNNRTG 2 cut(s) 149, 683
SacI GAGCTC 1 cut(s) 623
SapI GCTCTTC 1 cut(s) 962
SaqAI TTAA 2 cut(s) 603, 1037
SatI GCNGC 4 cut(s) 407, 627, 692, 727
Sau3AI GATC 3 cut(s) 73, 875, 1069
Sau96I GGNCC 3 cut(s) 291, 413, 501
SchI GAGTC 4 cut(s) 142, 386, 484, 1076
ScrFI CCNGG 1 cut(s) 648
SduI GDGCHC 4 cut(s) 180, 571, 614, 623
SfaNI GCATC 2 cut(s) 382, 826
SfuI TTCGAA 1 cut(s) 278
SinI GGWCC 3 cut(s) 291, 413, 501
SmiMI CAYNNNNRTG 2 cut(s) 149, 683
SmlI CTYRAG 1 cut(s) 330
SmoI CTYRAG 1 cut(s) 330
Sse9I AATT 8 cut(s) 212, 280, 695, 732, 755, 880, 886, 981
SsiI CCGC 7 cut(s) 128, 239, 381, 564, 727, 752, 812
SspMI CTAG 1 cut(s) 630
SstI GAGCTC 1 cut(s) 623
StyD4I CCNGG 1 cut(s) 646
TaaI ACNGT 3 cut(s) 501, 781, 871
TaiI ACGT 2 cut(s) 28, 183
TaqI TCGA 2 cut(s) 278, 550
TaqII GACCGA 1 cut(s) 401
TasI AATT 8 cut(s) 212, 280, 695, 732, 755, 880, 886, 981
TatI WGTACW 3 cut(s) 141, 157, 736
TauI GCSGC 1 cut(s) 729
TfiI GAWTC 2 cut(s) 398, 554
Tru1I TTAA 2 cut(s) 603, 1037
Tru9I TTAA 2 cut(s) 603, 1037
TscAI CASTG 1 cut(s) 601
TseFI GTSAC 1 cut(s) 637
TseI GCWGC 3 cut(s) 406, 626, 691
Tsp45I GTSAC 1 cut(s) 637
TspDTI ATGAA 2 cut(s) 212, 464
TspRI CASTG 1 cut(s) 601
VneI GTGCAC 1 cut(s) 567
VpaK11BI GGWCC 3 cut(s) 291, 413, 501
XapI RAATTY 1 cut(s) 280
XceI RCATGY 2 cut(s) 57, 171
XmiI GTMKAC 1 cut(s) 35
XspI CTAG 1 cut(s) 630
Zsp2I ATGCAT 1 cut(s) 55
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.