Rh4CG137200

metal ion binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
OG0000343
Physical Location & Seq
Forward (+)
27132859 .. 27144190
11332 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG137200.1

Sequence Viewer

Length: 1752 bp
ATGGAGGCTGCCAACAACAGCCCCGGAATCAGAGAAGAAGGCGAGCTCTCTCCCGACGACGCTGACGACATTCAAGTTACTAAAAGGCTCAAATCTGTGGTTGATGATACGATTGATGATGCTGAAGATGAGTTCATTGACATTGATTATATGTTTGGCTATGTCTGCGCTTTGTGTCATGATGGCGGTGACCTCTTGTGTTGTGAAGGGAGGTGCCTAAGGTCATTTCATGCAACTCCAGAGACTGGTCAGGACTCTGGTTGCGTATCTCTTGGCTTTACGAAGGATGCAGTAGATGCAATGCCTAATTTCTTATGCCAGAACTGCAAATACAAACAACACCAGTGCTTTGTTTGTGGAGAGTTGGGATCTTCAGACAAATCTTCAGGTGCTGCTGAGGTTGTTCCCTGTGTTTCTCCGGTATGTGGTCAATTCTACCATCCACATTGTGTTGCAAAAGAACTTTCTCAAGATAATGGAGTTCCTGCTGAAGAACTTGAGAAAAAGATTACAATGGGAGAATCTTTTACATGTCCAGTTCATAAGTGCCGCGTTTGTAAACAAGGAGAAAATATTAAGGATCACGGTTTACAATTTGCTGTGTGCATGCTCTGTCCCATGTCATACCACAGGAAATGCCTGCCAAGTTTTATTCCTTTCGAAGACAAAGAAGGAACATGTGGTGAAGGAAAATTAGTAACAAGAGCTTGGGACGGAATAATGCCTAATCGTATTCTAATATATTGCATAAAACACAAGGAAGATAAAACAACTAAACTTTTTGTAAGGGACCACATAAAATTTCCTGCTGTTAAAGAGAAGAGGAAACTGACACCACAGTCTATTGTGGACAGAGAGCAAGTTGCGTCTATGATGATAAATCCTTCATTGGAAGAATCATACAGAGAAAGAACTGCAAACACAGAATTCAAACAGAAGGAGAAGCCATCTTTTGCTAGAAAGCGTGGAAATTTGGATGCACCTAATACAGATACAAAAAGGAGAATATTGGGCTTAATGGAAAAGGCTGCATCTTCAATAACCTTGAAAGATATATTAAGGAAGTACCCAGTTCCATCTCATACTTACTCCATGAAAAATGTTGTGGACACGAAAATGTCATTGGGAAAGGTGGAAGTCTCGATTGAGGCCGCTAGAACAGCATTGAGAAAACTAGATGAAGGGTGCAGTACCAAAGATGCAGAAGCTGTTTGTGGGCCTGAGGTTCTTAAACAGATATTTAGATGGAAGACAAAGATGAATGTTTATCTCGGTCCTTTCCTTCATGGCATGCGCTACACATCCTTTGGTCGCCATTTTACAAACGTGGAAAAACTAAAACAGATTGTAGATAAGCTCCATTGGTATGTGAAGACCGGAGATATGATTGTGGACTTTTGCTGTGGTGCTAATGACTTCAGTGTCATTATGAAAAAAAAGCTTGAAGAGATGGGAAAGAATTGCTACTACAAGAACTATGACCTTTTTCAAGCTAAGAATGATTTTAATTTCGAAAAGAAGGACTGGATGACTGTCCAGAGGGAGGAGCTACCCGTGGGATCTCAGTTGATCATGGGGCTGAACCCTCCTTTTGGAGTTAAAGCATCTCGGGCGAACCAGTTCATTGATAAGGCTCTCGGGTTTAATCCAAAGCTCCTAATTCTTATTGTTCCATCAGAAACACAAAGGTACTATGCAGTTGTTCCTCTATCTGATCTCTCTTACGCACATGCATGCAAATTATGGGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006325 GO:0006355 GO:0006950 GO:0006952 GO:0006996 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0009605 GO:0009607 GO:0009620 GO:0009791 GO:0009889 GO:0009893 GO:0009909 GO:0009911 GO:0009987 GO:0010228 GO:0010468 GO:0010556 GO:0010604 GO:0010638 GO:0016043 GO:0019219 GO:0019222 GO:0022414 GO:0023052 GO:0030154 GO:0031056 GO:0031058 GO:0031060 GO:0031062 GO:0031323 GO:0031325 GO:0031326 GO:0031399 GO:0031401 GO:0031440 GO:0031935 GO:0031937 GO:0032268 GO:0032270 GO:0032501 GO:0032502 GO:0033043 GO:0033044 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0043954 GO:0044030 GO:0044424 GO:0044464 GO:0048366 GO:0048367 GO:0048468 GO:0048518 GO:0048522 GO:0048580 GO:0048582 GO:0048608 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0048869 GO:0050684 GO:0050789 GO:0050793 GO:0050794 GO:0050832 GO:0050896 GO:0051052 GO:0051094 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051239 GO:0051240 GO:0051246 GO:0051247 GO:0051252 GO:0051276 GO:0051570 GO:0051574 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0060968 GO:0061085 GO:0061087 GO:0061458 GO:0065007 GO:0070827 GO:0070828 GO:0070829 GO:0071840 GO:0080090 GO:0090436 GO:0097159 GO:0098542 GO:0099402 GO:0140110 GO:1900109 GO:1900111 GO:1900363 GO:1901363 GO:1902275 GO:1903311 GO:1903506 GO:1905269 GO:2000024 GO:2000026 GO:2000112 GO:2000241 GO:2000243 GO:2001141 GO:2001252
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DNMT1-RFD

Protein Analysis

583

Amino Acids

65.88

Weight (kDa)

7.66

Isoelectric Point (pI)

39.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PHD_NSD PF22908 112 - 181 1.5e-18 Histone-lysine N-methyltransferase NSD-like, PHD zinc finger
Mtase_EDM2 PF26055 456 - 564 1.5e-58 EDM2 methyltransferase-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000343)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48090 AT5G48090 AT5G48090 AT5G55390 AT5G55390 AT5G55390
fragaria_vesca FvH4_3g23690 FvH4_4g08730 FvH4_4g08730 FvH4_4g08730 FvH4_4g08730 FvH4_4g08730 FvH4_4g08730 FvH4_5g31160 FvH4_5g31160 FvH4_5g31160 FvH4_5g31160 FvH4_5g31160
malus_domestica MD03G1191000.v1.1 MD11G1207800.v1.1 MD11G1208000.v1.1
prunus_persica Prupe.4G227500_v2.0.a1 Prupe.4G227500_v2.0.a1 Prupe.4G227500_v2.0.a1 Prupe.4G227500_v2.0.a1 Prupe.4G227500_v2.0.a1 Prupe.4G227500_v2.0.a1 Prupe.4G227600_v2.0.a1 Prupe.4G227700_v2.0.a1 Prupe.4G227800_v2.0.a1 Prupe.4G227800_v2.0.a1 Prupe.4G227800_v2.0.a1 Prupe.4G227800_v2.0.a1 Prupe.4G227800_v2.0.a1
pyrus_communis pycom01g03400 pycom03g14420 pycom11g18100 pycom11g18140 pycom11g18150 pycom11g18160
rosa_chinensis RchiOBHm_Chr2g0145981 RchiOBHm_Chr4g0405241 RchiOBHm_Chr4g0405271 RchiOBHm_Chr5g0016201 RchiOBHm_Chr5g0041831 RchiOBHm_Chr5g0041871 RchiOBHm_Chr5g0041881 RchiOBHm_Chr5g0059241
rosa_laevigata RLG00000002117 RLG00000008861 RLG00000008862 RLG00000011000 RLG00000033216 RLG00000034097 RLG00000034101
rosa_multiflora Rmu_sc0000161.1_g000001 Rmu_sc0000861.1_g000040 Rmu_sc0007522.1_g000003 Rmu_sc0009443.1_g000015 Rmu_sc0022129.1_g000001 Rmu_sc0042315.1_g000001
rosa_roxburghii Rroxscaffold_1G00038660 Rroxscaffold_1G00038690 Rroxscaffold_5G00349560 Rroxscaffold_5G00349610 Rroxscaffold_6G00388370 Rroxscaffold_7G00188740
rosa_rugosa Rorug03G0199700 Rorug04G0055400 Rorug04G0055500 Rorug04G0055900 Rorug04G0056000 Rorug04G0056100 Rorug04G0056100 Rorug04G0056200 Rorug05G0195600 Rorug05G0195700 Rorug05G0195800 Rorug05G0195900 Rorug05G0196800 Rorug05G0385000
rosa_samantha Rh4AG129900 Rh4AG130100 Rh4BG124200 Rh4BG124400 Rh4BG124500 Rh4CG137200 Rh4CG137300 Rh4DG123500 Rh4DG123700 Rh5AG280800 Rh5AG281400 Rh5BG286700 Rh5BG287000 Rh5BG397800 Rh5CG318100 Rh5CG318600 Rh5CG421600 Rh5DG132300 Rh5DG132400 Rh5DG295400 Rh5DG295700 Rh7BG475300
rosa_wichuraiana Rw0G001330 Rw0G005730 Rw4G008670 Rw4G010510 Rw4G010540 Rw5G026450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 838, 1421
AccB1I GGYRCC 1 cut(s) 213
AccB7I CCANNNNNTGG 1 cut(s) 245
AccII CGCG 1 cut(s) 552
AciI CCGC 3 cut(s) 186, 550, 1152
AclWI GGATC 3 cut(s) 376, 588, 1567
AcsI RAATTY 3 cut(s) 800, 926, 970
AcuI CTGAAG 5 cut(s) 144, 357, 369, 510, 1402
AdeI CACNNNGTG 1 cut(s) 449
AfaI GTAC 3 cut(s) 1067, 1192, 1691
AfiI CCNNNNNNNGG 4 cut(s) 245, 425, 1543, 1592
AflIII ACRYGT 2 cut(s) 530, 677
AgsI TTSAA 6 cut(s) 74, 931, 1038, 1048, 1445, 1490
AjuI GAANNNNNNNTTGG 2 cut(s) 1106, 1138
AluBI AGCT 8 cut(s) 46, 707, 1208, 1357, 1441, 1493, 1549, 1654
AluI AGCT 8 cut(s) 46, 707, 1208, 1357, 1441, 1493, 1549, 1654
Alw21I GWGCWC 1 cut(s) 48
Alw26I GTCTC 2 cut(s) 236, 1144
AlwI GGATC 3 cut(s) 376, 588, 1567
AlwNI CAGNNNCTG 3 cut(s) 245, 392, 1208
Ama87I CYCGRG 2 cut(s) 1608, 1637
AoxI GGCC 2 cut(s) 1149, 1217
ApeKI GCWGC 3 cut(s) 8, 392, 1028
ApoI RAATTY 3 cut(s) 800, 926, 970
Asp700I GAANNNNTTC 1 cut(s) 1619
AspLEI GCGC 2 cut(s) 170, 1296
AspS9I GGNCC 3 cut(s) 790, 1217, 1274
AsuC2I CCSGG 1 cut(s) 24
AsuHPI GGTGA 2 cut(s) 200, 695
AsuII TTCGAA 2 cut(s) 660, 1512
AvaI CYCGRG 2 cut(s) 1608, 1637
AvaII GGWCC 2 cut(s) 790, 1274
AxyI CCTNAGG 2 cut(s) 218, 1221
BanI GGYRCC 1 cut(s) 213
BanII GRGCYC 1 cut(s) 48
BbsI GAAGAC 3 cut(s) 669, 1256, 1379
Bbv12I GWGCWC 1 cut(s) 48
BbvCI CCTCAGC 1 cut(s) 396
BbvI GCAGC 2 cut(s) 379, 1015
BccI CCATC 7 cut(s) 176, 447, 955, 1084, 1239, 1444, 1681
BclI TGATCA 1 cut(s) 1569
BcnI CCSGG 1 cut(s) 24
BcoDI GTCTC 2 cut(s) 236, 1144
BfaI CTAG 3 cut(s) 957, 1155, 1175
BisI GCNGC 5 cut(s) 9, 393, 550, 1029, 1152
BlsI GCNGC 5 cut(s) 10, 394, 551, 1030, 1153
Bme1390I CCNGG 1 cut(s) 24
Bme18I GGWCC 2 cut(s) 790, 1274
BmeT110I CYCGRG 2 cut(s) 1608, 1637
BmgT120I GGNCC 3 cut(s) 790, 1217, 1274
BmiI GGNNCC 2 cut(s) 215, 791
BmrFI CCNGG 1 cut(s) 24
BmrI ACTGGG 1 cut(s) 1064
BmsI GCATC 7 cut(s) 109, 277, 286, 967, 1040, 1189, 1613
BmuI ACTGGG 1 cut(s) 1064
BpiI GAAGAC 3 cut(s) 669, 1256, 1379
BpmI CTGGAG 1 cut(s) 222
Bpu10I CCTNAGC 1 cut(s) 396
Bpu14I TTCGAA 2 cut(s) 660, 1512
BpuEI CTTGAG 2 cut(s) 453, 518
BpuMI CCSGG 1 cut(s) 24
BsaJI CCNNGG 2 cut(s) 22, 1554
BsaWI WCCGGW 2 cut(s) 418, 1376
Bsc4I CCNNNNNNNGG 4 cut(s) 245, 425, 1543, 1592
Bse1I ACTGG 6 cut(s) 250, 343, 536, 1070, 1529, 1618
Bse21I CCTNAGG 2 cut(s) 218, 1221
Bse3DI GCAATG 1 cut(s) 306
BseDI CCNNGG 2 cut(s) 22, 1554
BseGI GGATG 5 cut(s) 292, 439, 982, 1301, 1533
BseLI CCNNNNNNNGG 4 cut(s) 245, 425, 1543, 1592
BseMI GCAATG 1 cut(s) 306
BseMII CTCAG 3 cut(s) 387, 1212, 1577
BseNI ACTGG 6 cut(s) 250, 343, 536, 1070, 1529, 1618
BseRI GAGGAG 1 cut(s) 1559
BseXI GCAGC 2 cut(s) 379, 1015
BsgI GTGCAG 1 cut(s) 1207
Bsh1236I CGCG 1 cut(s) 552
BshFI GGCC 2 cut(s) 1151, 1219
BshNI GGYRCC 1 cut(s) 213
BsiHKAI GWGCWC 1 cut(s) 48
BsiHKCI CYCGRG 2 cut(s) 1608, 1637
BsiSI CCGG 3 cut(s) 24, 419, 1377
BslFI GGGAC 3 cut(s) 600, 725, 803
BslI CCNNNNNNNGG 4 cut(s) 245, 425, 1543, 1592
BsmAI GTCTC 2 cut(s) 236, 1144
BsmFI GGGAC 3 cut(s) 600, 725, 803
BsnI GGCC 2 cut(s) 1151, 1219
BsoBI CYCGRG 2 cut(s) 1608, 1637
Bsp119I TTCGAA 2 cut(s) 660, 1512
Bsp1286I GDGCHC 1 cut(s) 48
Bsp143I GATC 5 cut(s) 368, 580, 1559, 1569, 1714
BspACI CCGC 3 cut(s) 186, 550, 1152
BspANI GGCC 2 cut(s) 1151, 1219
BspCNI CTCAG 3 cut(s) 388, 1213, 1576
BspFNI CGCG 1 cut(s) 552
BspHI TCATGA 1 cut(s) 178
BspLI GGNNCC 2 cut(s) 215, 791
BspPI GGATC 3 cut(s) 376, 588, 1567
BspT104I TTCGAA 2 cut(s) 660, 1512
BspT107I GGYRCC 1 cut(s) 213
BsrDI GCAATG 1 cut(s) 306
BsrI ACTGG 6 cut(s) 250, 343, 536, 1070, 1529, 1618
BssECI CCNNGG 2 cut(s) 22, 1554
BssMI GATC 5 cut(s) 368, 580, 1559, 1569, 1714
Bst4CI ACNGT 3 cut(s) 587, 840, 1534
Bst6I CTCTTC 2 cut(s) 815, 1440
BstAPI GCANNNNNTGC 1 cut(s) 296
BstBI TTCGAA 2 cut(s) 660, 1512
BstC8I GCNNGC 5 cut(s) 44, 608, 641, 1292, 1735
BstDEI CTNAG 5 cut(s) 218, 396, 1221, 1494, 1563
BstDSI CCRYGG 1 cut(s) 1554
BstEII GGTNACC 1 cut(s) 188
BstF5I GGATG 5 cut(s) 292, 439, 982, 1301, 1533
BstFNI CGCG 1 cut(s) 552
BstHHI GCGC 2 cut(s) 170, 1296
BstKTI GATC 5 cut(s) 371, 583, 1562, 1572, 1717
BstMAI GTCTC 2 cut(s) 236, 1144
BstMBI GATC 5 cut(s) 368, 580, 1559, 1569, 1714
BstMWI GCNNNNNNNGC 5 cut(s) 165, 296, 324, 1160, 1610
BstNSI RCATGY 6 cut(s) 534, 610, 681, 1294, 1733, 1737
BstPI GGTNACC 1 cut(s) 188
BstSCI CCNGG 1 cut(s) 22
BstUI CGCG 1 cut(s) 552
BstV1I GCAGC 2 cut(s) 379, 1015
BstV2I GAAGAC 3 cut(s) 669, 1256, 1379
BstX2I RGATCY 2 cut(s) 368, 1559
BstYI RGATCY 2 cut(s) 368, 1559
Bsu36I CCTNAGG 2 cut(s) 218, 1221
BsuRI GGCC 2 cut(s) 1151, 1219
BtgI CCRYGG 1 cut(s) 1554
BtsCI GGATG 5 cut(s) 292, 439, 982, 1301, 1533
BtsIMutI CAGTG 2 cut(s) 350, 1426
Cac8I GCNNGC 5 cut(s) 44, 608, 641, 1292, 1735
CaiI CAGNNNCTG 3 cut(s) 245, 392, 1208
CciI TCATGA 1 cut(s) 178
CfoI GCGC 2 cut(s) 170, 1296
Cfr13I GGNCC 3 cut(s) 790, 1217, 1274
CseI GACGC 2 cut(s) 68, 855
Csp6I GTAC 3 cut(s) 1066, 1191, 1690
CviQI GTAC 3 cut(s) 1066, 1191, 1690
DdeI CTNAG 5 cut(s) 218, 396, 1221, 1494, 1563
DpnI GATC 5 cut(s) 370, 582, 1561, 1571, 1716
DpnII GATC 5 cut(s) 368, 580, 1559, 1569, 1714
DraIII CACNNNGTG 1 cut(s) 449
DrdI GACNNNNNNGTC 2 cut(s) 838, 1421
DseDI GACNNNNNNGTC 2 cut(s) 838, 1421
Eam1104I CTCTTC 2 cut(s) 815, 1440
EarI CTCTTC 2 cut(s) 815, 1440
Ecl136II GAGCTC 1 cut(s) 46
Eco24I GRGCYC 1 cut(s) 48
Eco47I GGWCC 2 cut(s) 790, 1274
Eco53kI GAGCTC 1 cut(s) 46
Eco57I CTGAAG 5 cut(s) 144, 357, 369, 510, 1402
Eco81I CCTNAGG 2 cut(s) 218, 1221
Eco88I CYCGRG 2 cut(s) 1608, 1637
Eco91I GGTNACC 1 cut(s) 188
EcoICRI GAGCTC 1 cut(s) 46
EcoO65I GGTNACC 1 cut(s) 188
EcoRI GAATTC 1 cut(s) 926
EcoT22I ATGCAT 1 cut(s) 1735
EcoT38I GRGCYC 1 cut(s) 48
FaqI GGGAC 3 cut(s) 600, 725, 803
FbaI TGATCA 1 cut(s) 1569
Fnu4HI GCNGC 5 cut(s) 9, 393, 550, 1029, 1152
FokI GGATG 5 cut(s) 299, 426, 989, 1288, 1540
FriOI GRGCYC 1 cut(s) 48
Fsp4HI GCNGC 5 cut(s) 9, 393, 550, 1029, 1152
FspBI CTAG 3 cut(s) 957, 1155, 1175
GlaI GCGC 2 cut(s) 169, 1295
GluI GCNGC 5 cut(s) 9, 393, 550, 1029, 1152
GsuI CTGGAG 1 cut(s) 222
HaeIII GGCC 2 cut(s) 1151, 1219
HapII CCGG 3 cut(s) 24, 419, 1377
HgaI GACGC 2 cut(s) 68, 855
HhaI GCGC 2 cut(s) 170, 1296
Hin6I GCGC 2 cut(s) 168, 1294
HinP1I GCGC 2 cut(s) 168, 1294
HindIII AAGCTT 1 cut(s) 1439
HinfI GANTC 4 cut(s) 27, 254, 521, 896
HpaII CCGG 3 cut(s) 24, 419, 1377
HphI GGTGA 2 cut(s) 200, 695
Hpy166II GTNNAC 5 cut(s) 560, 590, 850, 1108, 1393
Hpy188I TCNGA 4 cut(s) 32, 376, 1678, 1714
Hpy188III TCNNGA 7 cut(s) 53, 179, 239, 251, 470, 1141, 1537
Hpy8I GTNNAC 5 cut(s) 560, 590, 850, 1108, 1393
Hpy99I CGWCG 2 cut(s) 59, 62
HpyCH4III ACNGT 3 cut(s) 587, 840, 1534
HpyCH4IV ACGT 1 cut(s) 1326
HpyF10VI GCNNNNNNNGC 5 cut(s) 165, 296, 324, 1160, 1610
HpyF3I CTNAG 5 cut(s) 218, 396, 1221, 1494, 1563
HpySE526I ACGT 1 cut(s) 1326
HspAI GCGC 2 cut(s) 168, 1294
Ksp22I TGATCA 1 cut(s) 1569
Kzo9I GATC 5 cut(s) 368, 580, 1559, 1569, 1714
LmnI GCTCC 3 cut(s) 1362, 1546, 1659
Lsp1109I GCAGC 2 cut(s) 379, 1015
LweI GCATC 7 cut(s) 109, 277, 286, 967, 1040, 1189, 1613
MaeI CTAG 3 cut(s) 957, 1155, 1175
MaeII ACGT 1 cut(s) 1326
MaeIII GTNAC 3 cut(s) 76, 188, 697
MalI GATC 5 cut(s) 370, 582, 1561, 1571, 1716
MboI GATC 5 cut(s) 368, 580, 1559, 1569, 1714
MflI RGATCY 2 cut(s) 368, 1559
MhlI GDGCHC 1 cut(s) 48
MlyI GAGTC 1 cut(s) 248
Mph1103I ATGCAT 1 cut(s) 1735
MroXI GAANNNNTTC 1 cut(s) 1619
MseI TTAA 8 cut(s) 576, 813, 1016, 1058, 1230, 1506, 1599, 1644
MslI CAYNNNNRTG 3 cut(s) 1115, 1365, 1732
MspI CCGG 3 cut(s) 24, 419, 1377
MspR9I CCNGG 1 cut(s) 24
MvnI CGCG 1 cut(s) 552
MwoI GCNNNNNNNGC 5 cut(s) 165, 296, 324, 1160, 1610
NciI CCSGG 1 cut(s) 24
NdeII GATC 5 cut(s) 368, 580, 1559, 1569, 1714
NlaIV GGNNCC 2 cut(s) 215, 791
NmuCI GTSAC 1 cut(s) 188
NsiI ATGCAT 1 cut(s) 1735
NspI RCATGY 6 cut(s) 534, 610, 681, 1294, 1733, 1737
NspV TTCGAA 2 cut(s) 660, 1512
PaeI GCATGC 3 cut(s) 610, 1294, 1737
PagI TCATGA 1 cut(s) 178
PciI ACATGT 2 cut(s) 530, 677
PcsI WCGNNNNNNNCGW 1 cut(s) 63
PdmI GAANNNNTTC 1 cut(s) 1619
PfeI GAWTC 3 cut(s) 27, 521, 896
PflMI CCANNNNNTGG 1 cut(s) 245
PkrI GCNGC 5 cut(s) 10, 394, 551, 1030, 1153
PleI GAGTC 1 cut(s) 248
PpsI GAGTC 1 cut(s) 248
PscI ACATGT 2 cut(s) 530, 677
Psp124BI GAGCTC 1 cut(s) 48
PspEI GGTNACC 1 cut(s) 188
PspN4I GGNNCC 2 cut(s) 215, 791
PspPI GGNCC 3 cut(s) 790, 1217, 1274
PsrI GAACNNNNNNTAC 2 cut(s) 314, 346
PstNI CAGNNNCTG 3 cut(s) 245, 392, 1208
PsuI RGATCY 2 cut(s) 368, 1559
RsaI GTAC 3 cut(s) 1067, 1192, 1691
RsaNI GTAC 3 cut(s) 1066, 1191, 1690
RseI CAYNNNNRTG 3 cut(s) 1115, 1365, 1732
SacI GAGCTC 1 cut(s) 48
SaqAI TTAA 8 cut(s) 576, 813, 1016, 1058, 1230, 1506, 1599, 1644
SatI GCNGC 5 cut(s) 9, 393, 550, 1029, 1152
Sau3AI GATC 5 cut(s) 368, 580, 1559, 1569, 1714
Sau96I GGNCC 3 cut(s) 790, 1217, 1274
SchI GAGTC 1 cut(s) 248
ScrFI CCNGG 1 cut(s) 24
SduI GDGCHC 1 cut(s) 48
SfaNI GCATC 7 cut(s) 109, 277, 286, 967, 1040, 1189, 1613
SfuI TTCGAA 2 cut(s) 660, 1512
SinI GGWCC 2 cut(s) 790, 1274
SmiMI CAYNNNNRTG 3 cut(s) 1115, 1365, 1732
SmlI CTYRAG 2 cut(s) 468, 497
SmoI CTYRAG 2 cut(s) 468, 497
SphI GCATGC 3 cut(s) 610, 1294, 1737
SsiI CCGC 3 cut(s) 186, 550, 1152
SspI AATATT 2 cut(s) 574, 1008
SspMI CTAG 3 cut(s) 957, 1155, 1175
SstI GAGCTC 1 cut(s) 48
StyD4I CCNGG 1 cut(s) 22
TaaI ACNGT 3 cut(s) 587, 840, 1534
TaiI ACGT 1 cut(s) 1329
TaqI TCGA 3 cut(s) 660, 1142, 1512
TaqII GACCGA 1 cut(s) 1262
TauI GCSGC 2 cut(s) 552, 1154
TfiI GAWTC 3 cut(s) 27, 521, 896
Tru1I TTAA 8 cut(s) 576, 813, 1016, 1058, 1230, 1506, 1599, 1644
Tru9I TTAA 8 cut(s) 576, 813, 1016, 1058, 1230, 1506, 1599, 1644
TscAI CASTG 2 cut(s) 350, 1426
TseFI GTSAC 1 cut(s) 188
TseI GCWGC 3 cut(s) 8, 392, 1028
Tsp45I GTSAC 1 cut(s) 188
TspGWI ACGGA 1 cut(s) 729
TspRI CASTG 2 cut(s) 350, 1426
Van91I CCANNNNNTGG 1 cut(s) 245
VpaK11BI GGWCC 2 cut(s) 790, 1274
XapI RAATTY 3 cut(s) 800, 926, 970
XceI RCATGY 6 cut(s) 534, 610, 681, 1294, 1733, 1737
XmnI GAANNNNTTC 1 cut(s) 1619
XspI CTAG 3 cut(s) 957, 1155, 1175
Zsp2I ATGCAT 1 cut(s) 1735
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.