Rmu_sc0000161.1_g000001

metal ion binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000161.1
OG0000343
Physical Location & Seq
Forward (+)
1 .. 3059
3059 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000161.1_g000001.1.cds

Sequence Viewer

Length: 2248 bp
gatcgatgatgtaaaagatgatacgattcatgcagaagatgaggatatcgataacctgtttggtgaggtctgtgctttatgtgacgatggtggcaagatcatttggtcttttcatgcaactcaggaggcgggtgccggatcttattgcaaatctcttggctttatgcaggatgatgttgttgtatgccctggttcctctgataagtcctcaggtgctgctgaggtggtttcctgtttatccccaaactgtggtcgattttaccatccacattgtgttgcaatattactttaccaagataatggagttcccgctgaagaacttgagagaaagattgctggtggggaatcttttacttgtccacttcataagtgctgcatttgtaaacaaggagaaaataagaaggatagtgagttacaatttgctgtgtgcatgcgttgtccaaaatcgtaccacaggaaatgcctgccaagtgagattgcttttgaaaatcaaggagaaatgctagaagggagatcaataataagagcttgggatggtctattacctaaccgtatactcatctattgcgcaaaacatgatatagatattgaatttggaactgtaagaagggaccacgtaaaattccctgatgtcaaacagaatatgagcactctcaaaaagaagaagaagaagactattttagaagagaagtggaagccaatatcagaattccttgaagacggagacaaagttgggactaagagaaatatttccttggaaaaatcatgtagggataaaaatgctcctacagcacttaagacacaaaagccatatgttcaagtgaagaagactaggaaacttatgtcagagcagaaacctgtgtctaagaagagcgattcttctttggaagaatcagttggggaaggaagtgatccggtactatccacactagtcaagcagaagctttattcagttaaagagaagaaggctacttttggaaaagagaaaacttttgttgaagagaaagaaagccaactgacatcaacggtctctgtagacagagaaaaagctgtgtcgaagaggagaactccttcctctgaaggactatatagtgagaaaagtgctcctacaatatccaagaaaaaacagaagccatcttttgttgaagagaagaacaatgaccttgtaaaaaagaaaactaatgttgaagagaagaggaaacagacatcagagtcccttgttgagagagagacagctgtgtccaaaaagaaaaatccttcctcgaaagaatcctatagggaaagaaatgcttctacaactcccaaacagaagcagaagccatcagagctcactgtagatggagatgaggctgggtctaagaagggaagtcctttggaagaatcattaagtgcaattgcttcaactgtacccaaactgaagcagaagtcgacttctgccgtgaaactgggtagtaacaagaacagggaaaagacgttttctggtgtagatatttcaaggatggtgaaacgaaataattcactgaaaaatgaacgtcaggcttccatgtctgagaaaatcaagacctcactgggtgaagagccattttcttcaatggagtctgagcaggtgaagctcgggaacctggatacacctgatgctaatacagttagtgagatacacagggaaatgccaccacatactgaatgtggtgacgatggaaatcagcatcctaaccccagcaagtctcgtatgcactgtgctcatgctaacagtcgagtccaattcaaaattcctgatgatgcaggcagaaggtgcaccacgagtaatgatgagcctcgttcgagtgttaccaatcctaggtctggcaatgcgaaagggtgcaagagagagaactcgggaaaaccatattcaaatgggacgaaacagaaacagaaacagaaacagaaactgagaacagaatttgacagagtcccaccggcttgcattaaagggaagcaagatccgattttttcaagaggcaatgatatagcgggccaaaattcagtgtatgaccatattaggacgttctcatctactttttacagccatataggtcctgttgctgactcgttatcttgtatcaacagattagctatgccatcagatgcaactaaattggttggtccaagagcaccccaacctgattacctggataggtgtatgggtttcgctcctggtccgcacctgaactatgcactacagaattcagctggttggatcgatgagtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006325 GO:0006355 GO:0006950 GO:0006952 GO:0006996 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0009605 GO:0009607 GO:0009620 GO:0009791 GO:0009889 GO:0009893 GO:0009909 GO:0009911 GO:0009987 GO:0010228 GO:0010468 GO:0010556 GO:0010604 GO:0010638 GO:0016043 GO:0019219 GO:0019222 GO:0022414 GO:0023052 GO:0030154 GO:0031056 GO:0031058 GO:0031060 GO:0031062 GO:0031323 GO:0031325 GO:0031326 GO:0031399 GO:0031401 GO:0031440 GO:0031935 GO:0031937 GO:0032268 GO:0032270 GO:0032501 GO:0032502 GO:0033043 GO:0033044 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0043954 GO:0044030 GO:0044424 GO:0044464 GO:0048366 GO:0048367 GO:0048468 GO:0048518 GO:0048522 GO:0048580 GO:0048582 GO:0048608 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0048869 GO:0050684 GO:0050789 GO:0050793 GO:0050794 GO:0050832 GO:0050896 GO:0051052 GO:0051094 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051239 GO:0051240 GO:0051246 GO:0051247 GO:0051252 GO:0051276 GO:0051570 GO:0051574 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0060968 GO:0061085 GO:0061087 GO:0061458 GO:0065007 GO:0070827 GO:0070828 GO:0070829 GO:0071840 GO:0080090 GO:0090436 GO:0097159 GO:0098542 GO:0099402 GO:0140110 GO:1900109 GO:1900111 GO:1900363 GO:1901363 GO:1902275 GO:1903311 GO:1903506 GO:1905269 GO:2000024 GO:2000026 GO:2000112 GO:2000241 GO:2000243 GO:2001141 GO:2001252
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DNMT1-RFD

Protein Analysis

748

Amino Acids

83.15

Weight (kDa)

8.98

Isoelectric Point (pI)

51.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000343)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48090 AT5G48090 AT5G48090 AT5G55390 AT5G55390 AT5G55390
fragaria_vesca FvH4_3g23690 FvH4_4g08730 FvH4_4g08730 FvH4_4g08730 FvH4_4g08730 FvH4_4g08730 FvH4_4g08730 FvH4_5g31160 FvH4_5g31160 FvH4_5g31160 FvH4_5g31160 FvH4_5g31160
malus_domestica MD03G1191000.v1.1 MD11G1207800.v1.1 MD11G1208000.v1.1
prunus_persica Prupe.4G227500_v2.0.a1 Prupe.4G227500_v2.0.a1 Prupe.4G227500_v2.0.a1 Prupe.4G227500_v2.0.a1 Prupe.4G227500_v2.0.a1 Prupe.4G227500_v2.0.a1 Prupe.4G227600_v2.0.a1 Prupe.4G227700_v2.0.a1 Prupe.4G227800_v2.0.a1 Prupe.4G227800_v2.0.a1 Prupe.4G227800_v2.0.a1 Prupe.4G227800_v2.0.a1 Prupe.4G227800_v2.0.a1
pyrus_communis pycom01g03400 pycom03g14420 pycom11g18100 pycom11g18140 pycom11g18150 pycom11g18160
rosa_chinensis RchiOBHm_Chr2g0145981 RchiOBHm_Chr4g0405241 RchiOBHm_Chr4g0405271 RchiOBHm_Chr5g0016201 RchiOBHm_Chr5g0041831 RchiOBHm_Chr5g0041871 RchiOBHm_Chr5g0041881 RchiOBHm_Chr5g0059241
rosa_laevigata RLG00000002117 RLG00000008861 RLG00000008862 RLG00000011000 RLG00000033216 RLG00000034097 RLG00000034101
rosa_multiflora Rmu_sc0000161.1_g000001 Rmu_sc0000861.1_g000040 Rmu_sc0007522.1_g000003 Rmu_sc0009443.1_g000015 Rmu_sc0022129.1_g000001 Rmu_sc0042315.1_g000001
rosa_roxburghii Rroxscaffold_1G00038660 Rroxscaffold_1G00038690 Rroxscaffold_5G00349560 Rroxscaffold_5G00349610 Rroxscaffold_6G00388370 Rroxscaffold_7G00188740
rosa_rugosa Rorug03G0199700 Rorug04G0055400 Rorug04G0055500 Rorug04G0055900 Rorug04G0056000 Rorug04G0056100 Rorug04G0056100 Rorug04G0056200 Rorug05G0195600 Rorug05G0195700 Rorug05G0195800 Rorug05G0195900 Rorug05G0196800 Rorug05G0385000
rosa_samantha Rh4AG129900 Rh4AG130100 Rh4BG124200 Rh4BG124400 Rh4BG124500 Rh4CG137200 Rh4CG137300 Rh4DG123500 Rh4DG123700 Rh5AG280800 Rh5AG281400 Rh5BG286700 Rh5BG287000 Rh5BG397800 Rh5CG318100 Rh5CG318600 Rh5CG421600 Rh5DG132300 Rh5DG132400 Rh5DG295400 Rh5DG295700 Rh7BG475300
rosa_wichuraiana Rw0G001330 Rw0G005730 Rw4G008670 Rw4G010510 Rw4G010540 Rw5G026450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1595
AasI GACNNNNNNGTC 2 cut(s) 1211, 1238
Acc16I TGCGCA 1 cut(s) 569
Acc36I ACCTGC 1 cut(s) 1595
AccB1I GGYRCC 1 cut(s) 132
AccB7I CCANNNNNTGG 1 cut(s) 249
AccI GTMKAC 3 cut(s) 554, 1036, 1428
AciI CCGC 4 cut(s) 129, 310, 2010, 2199
AclWI GGATC 4 cut(s) 146, 906, 1974, 2244
AcsI RAATTY 7 cut(s) 591, 621, 708, 1768, 1938, 2018, 2222
AcuI CTGAAG 3 cut(s) 334, 1099, 1437
AdeI CACNNNGTG 2 cut(s) 273, 1572
AfaI GTAC 3 cut(s) 450, 919, 1408
AfiI CCNNNNNNNGG 3 cut(s) 249, 1837, 1842
AflII CTTAAG 1 cut(s) 795
AhlI ACTAGT 1 cut(s) 929
AjnI CCWGG 4 cut(s) 188, 1621, 2167, 2192
AjuI GAANNNNNNNTTGG 4 cut(s) 880, 912, 1753, 1785
AluBI AGCT 8 cut(s) 528, 944, 1050, 1236, 1328, 1613, 2112, 2229
AluI AGCT 8 cut(s) 528, 944, 1050, 1236, 1328, 1613, 2112, 2229
Alw21I GWGCWC 6 cut(s) 651, 1106, 1330, 1742, 1797, 2153
Alw26I GTCTC 4 cut(s) 718, 1034, 1224, 1729
Alw44I GTGCAC 1 cut(s) 1793
AlwI GGATC 4 cut(s) 146, 906, 1974, 2244
AlwNI CAGNNNCTG 2 cut(s) 216, 1928
Ama87I CYCGRG 2 cut(s) 1614, 1874
AoxI GGCC 1 cut(s) 2012
ApaLI GTGCAC 1 cut(s) 1793
ApeKI GCWGC 2 cut(s) 216, 373
ApoI RAATTY 7 cut(s) 591, 621, 708, 1768, 1938, 2018, 2222
Asp700I GAANNNNTTC 4 cut(s) 749, 1070, 1289, 1514
AspA2I CCTAGG 1 cut(s) 1836
AspLEI GCGC 1 cut(s) 570
AspS9I GGNCC 5 cut(s) 611, 2012, 2073, 2142, 2196
AsuHPI GGTGA 5 cut(s) 75, 1514, 1584, 1619, 1701
AvaI CYCGRG 2 cut(s) 1614, 1874
AvaII GGWCC 4 cut(s) 611, 2073, 2142, 2196
AvrII CCTAGG 1 cut(s) 1836
AxyI CCTNAGG 1 cut(s) 209
BaeGI GKGCMC 1 cut(s) 1797
BanI GGYRCC 1 cut(s) 132
BanII GRGCYC 1 cut(s) 1330
BauI CACGAG 1 cut(s) 1799
BbsI GAAGAC 3 cut(s) 678, 724, 834
Bbv12I GWGCWC 6 cut(s) 651, 1106, 1330, 1742, 1797, 2153
BbvCI CCTCAGC 1 cut(s) 220
BbvI GCAGC 2 cut(s) 203, 360
BccI CCATC 9 cut(s) 81, 271, 528, 1142, 1328, 1332, 1493, 1689, 2126
BceAI ACGGC 1 cut(s) 1422
BciT130I CCWGG 4 cut(s) 190, 1623, 2169, 2194
BciVI GTATCC 1 cut(s) 1619
BcoDI GTCTC 4 cut(s) 718, 1034, 1224, 1729
BcuI ACTAGT 1 cut(s) 929
BfaI CTAG 4 cut(s) 504, 832, 930, 1837
BfmI CTRYAG 5 cut(s) 787, 1033, 1274, 1333, 2217
BfrI CTTAAG 1 cut(s) 795
BfuAI ACCTGC 1 cut(s) 1595
BfuI GTATCC 1 cut(s) 1619
BisI GCNGC 2 cut(s) 217, 374
BlnI CCTAGG 1 cut(s) 1836
BlsI GCNGC 2 cut(s) 218, 375
Bme1390I CCNGG 4 cut(s) 190, 1623, 2169, 2194
Bme18I GGWCC 4 cut(s) 611, 2073, 2142, 2196
BmeT110I CYCGRG 2 cut(s) 1614, 1874
BmgT120I GGNCC 5 cut(s) 611, 2012, 2073, 2142, 2196
BmiI GGNNCC 4 cut(s) 134, 194, 612, 1620
BmrFI CCNGG 4 cut(s) 190, 1623, 2169, 2194
BmrI ACTGGG 2 cut(s) 1455, 1578
BmsI GCATC 4 cut(s) 1625, 1715, 1769, 2114
BmuI ACTGGG 2 cut(s) 1455, 1578
BpiI GAAGAC 3 cut(s) 678, 724, 834
BplI GAGNNNNNCTC 2 cut(s) 1052, 1084
Bpu10I CCTNAGC 1 cut(s) 220
BpuEI CTTGAG 1 cut(s) 342
Bsa29I ATCGAT 3 cut(s) 4, 49, 2239
BsaAI YACGTR 1 cut(s) 617
BsaBI GATNNNNATC 1 cut(s) 1699
BsaI GGTCTC 1 cut(s) 1034
BsaJI CCNNGG 3 cut(s) 188, 754, 1836
BsaWI WCCGGW 1 cut(s) 914
BsaXI ACNNNNNCTCC 2 cut(s) 715, 745
Bsc4I CCNNNNNNNGG 3 cut(s) 249, 1837, 1842
Bse118I RCCGGY 1 cut(s) 1955
Bse1I ACTGG 2 cut(s) 1450, 1573
Bse21I CCTNAGG 1 cut(s) 209
Bse3DI GCAATG 2 cut(s) 1853, 2006
Bse8I GATNNNNATC 1 cut(s) 1699
BseBI CCWGG 4 cut(s) 190, 1623, 2169, 2194
BseCI ATCGAT 3 cut(s) 4, 49, 2239
BseDI CCNNGG 3 cut(s) 188, 754, 1836
BseGI GGATG 5 cut(s) 176, 263, 539, 1504, 1706
BseJI GATNNNNATC 1 cut(s) 1699
BseLI CCNNNNNNNGG 3 cut(s) 249, 1837, 1842
BseMI GCAATG 2 cut(s) 1853, 2006
BseMII CTCAG 6 cut(s) 135, 211, 223, 1540, 1591, 1920
BseNI ACTGG 2 cut(s) 1450, 1573
BseRI GAGGAG 1 cut(s) 1076
BseSI GKGCMC 1 cut(s) 1797
BseXI GCAGC 2 cut(s) 203, 360
BseYI CCCAGC 2 cut(s) 1350, 1716
BshFI GGCC 1 cut(s) 2014
BshNI GGYRCC 1 cut(s) 132
BshVI ATCGAT 3 cut(s) 4, 49, 2239
BsiHKAI GWGCWC 6 cut(s) 651, 1106, 1330, 1742, 1797, 2153
BsiHKCI CYCGRG 2 cut(s) 1614, 1874
BsiSI CCGG 3 cut(s) 136, 915, 1956
BslFI GGGAC 5 cut(s) 624, 749, 1199, 1910, 1935
BslI CCNNNNNNNGG 3 cut(s) 249, 1837, 1842
BsmAI GTCTC 4 cut(s) 718, 1034, 1224, 1729
BsmFI GGGAC 5 cut(s) 624, 749, 1199, 1910, 1935
BsnI GGCC 1 cut(s) 2014
Bso31I GGTCTC 1 cut(s) 1034
BsoBI CYCGRG 2 cut(s) 1614, 1874
Bsp1286I GDGCHC 6 cut(s) 651, 1106, 1330, 1742, 1797, 2153
Bsp143I GATC 6 cut(s) 97, 138, 513, 911, 1979, 2236
BspACI CCGC 4 cut(s) 129, 310, 2010, 2199
BspANI GGCC 1 cut(s) 2014
BspCNI CTCAG 6 cut(s) 134, 212, 222, 1541, 1592, 1921
BspDI ATCGAT 3 cut(s) 4, 49, 2239
BspLI GGNNCC 4 cut(s) 134, 194, 612, 1620
BspMI ACCTGC 1 cut(s) 1595
BspPI GGATC 4 cut(s) 146, 906, 1974, 2244
BspQI GCTCTTC 2 cut(s) 864, 1570
BspT107I GGYRCC 1 cut(s) 132
BspTI CTTAAG 1 cut(s) 795
BspTNI GGTCTC 1 cut(s) 1034
BsrDI GCAATG 2 cut(s) 1853, 2006
BsrFI RCCGGY 1 cut(s) 1955
BsrI ACTGG 2 cut(s) 1450, 1573
BssAI RCCGGY 1 cut(s) 1955
BssECI CCNNGG 3 cut(s) 188, 754, 1836
BssMI GATC 6 cut(s) 97, 138, 513, 911, 1979, 2236
BssNAI GTATAC 1 cut(s) 555
BssSI CACGAG 1 cut(s) 1799
BssT1I CCWWGG 2 cut(s) 754, 1836
Bst1107I GTATAC 1 cut(s) 555
Bst2BI CACGAG 1 cut(s) 1799
Bst2UI CCWGG 4 cut(s) 190, 1623, 2169, 2194
Bst4CI ACNGT 9 cut(s) 249, 552, 602, 1028, 1334, 1406, 1646, 1737, 1752
Bst6I CTCTTC 8 cut(s) 679, 864, 994, 1053, 1141, 1183, 1188, 1570
BstAFI CTTAAG 1 cut(s) 795
BstAPI GCANNNNNTGC 1 cut(s) 1792
BstBAI YACGTR 1 cut(s) 617
BstC8I GCNNGC 5 cut(s) 432, 465, 1784, 1961, 2012
BstDEI CTNAG 9 cut(s) 121, 209, 220, 739, 865, 1357, 1549, 1600, 1929
BstF5I GGATG 5 cut(s) 176, 263, 539, 1504, 1706
BstHHI GCGC 1 cut(s) 570
BstKTI GATC 7 cut(s) 4, 100, 141, 516, 914, 1982, 2239
BstMAI GTCTC 4 cut(s) 718, 1034, 1224, 1729
BstMBI GATC 6 cut(s) 97, 138, 513, 911, 1979, 2236
BstMWI GCNNNNNNNGC 4 cut(s) 789, 1325, 1610, 1792
BstNI CCWGG 4 cut(s) 190, 1623, 2169, 2194
BstNSI RCATGY 1 cut(s) 434
BstSCI CCNGG 4 cut(s) 188, 1621, 2167, 2192
BstSFI CTRYAG 5 cut(s) 787, 1033, 1274, 1333, 2217
BstSLI GKGCMC 1 cut(s) 1797
BstV1I GCAGC 2 cut(s) 203, 360
BstV2I GAAGAC 3 cut(s) 678, 724, 834
BstX2I RGATCY 2 cut(s) 138, 1979
BstXI CCANNNNNNTGG 1 cut(s) 300
BstYI RGATCY 2 cut(s) 138, 1979
BstZ17I GTATAC 1 cut(s) 555
Bsu15I ATCGAT 3 cut(s) 4, 49, 2239
Bsu36I CCTNAGG 1 cut(s) 209
BsuI GTATCC 1 cut(s) 1619
BsuRI GGCC 1 cut(s) 2014
BsuTUI ATCGAT 3 cut(s) 4, 49, 2239
BtsCI GGATG 5 cut(s) 176, 263, 539, 1504, 1706
BtsIMutI CAGTG 5 cut(s) 1330, 1518, 1566, 1733, 2029
BveI ACCTGC 1 cut(s) 1595
Cac8I GCNNGC 5 cut(s) 432, 465, 1784, 1961, 2012
CaiI CAGNNNCTG 2 cut(s) 216, 1928
CfoI GCGC 1 cut(s) 570
Cfr10I RCCGGY 1 cut(s) 1955
Cfr13I GGNCC 5 cut(s) 611, 2012, 2073, 2142, 2196
ClaI ATCGAT 3 cut(s) 4, 49, 2239
Csp6I GTAC 3 cut(s) 449, 918, 1407
CviAII CATG 7 cut(s) 30, 114, 431, 576, 766, 1544, 1743
CviQI GTAC 3 cut(s) 449, 918, 1407
DdeI CTNAG 9 cut(s) 121, 209, 220, 739, 865, 1357, 1549, 1600, 1929
DpnI GATC 7 cut(s) 3, 99, 140, 515, 913, 1981, 2238
DpnII GATC 6 cut(s) 97, 138, 513, 911, 1979, 2236
DraIII CACNNNGTG 2 cut(s) 273, 1572
DrdI GACNNNNNNGTC 2 cut(s) 1211, 1238
DseDI GACNNNNNNGTC 2 cut(s) 1211, 1238
Eam1104I CTCTTC 8 cut(s) 679, 864, 994, 1053, 1141, 1183, 1188, 1570
EarI CTCTTC 8 cut(s) 679, 864, 994, 1053, 1141, 1183, 1188, 1570
Ecl136II GAGCTC 1 cut(s) 1328
Eco130I CCWWGG 2 cut(s) 754, 1836
Eco24I GRGCYC 1 cut(s) 1330
Eco31I GGTCTC 1 cut(s) 1034
Eco32I GATATC 1 cut(s) 47
Eco47I GGWCC 4 cut(s) 611, 2073, 2142, 2196
Eco53kI GAGCTC 1 cut(s) 1328
Eco57I CTGAAG 3 cut(s) 334, 1099, 1437
Eco81I CCTNAGG 1 cut(s) 209
Eco88I CYCGRG 2 cut(s) 1614, 1874
EcoICRI GAGCTC 1 cut(s) 1328
EcoO109I RGGNCCY 1 cut(s) 2073
EcoRI GAATTC 2 cut(s) 708, 2222
EcoRII CCWGG 4 cut(s) 188, 1621, 2167, 2192
EcoRV GATATC 1 cut(s) 47
EcoT14I CCWWGG 2 cut(s) 754, 1836
EcoT38I GRGCYC 1 cut(s) 1330
ErhI CCWWGG 2 cut(s) 754, 1836
FaeI CATG 7 cut(s) 33, 117, 434, 579, 769, 1547, 1746
FalI AAGNNNNNCTT 2 cut(s) 1274, 1306
FaqI GGGAC 5 cut(s) 624, 749, 1199, 1910, 1935
FatI CATG 7 cut(s) 29, 113, 430, 575, 765, 1543, 1742
FauI CCCGC 3 cut(s) 122, 317, 2003
FauNDI CATATG 1 cut(s) 812
FblI GTMKAC 3 cut(s) 554, 1036, 1428
Fnu4HI GCNGC 2 cut(s) 217, 374
FokI GGATG 5 cut(s) 183, 250, 546, 1511, 1693
FriOI GRGCYC 1 cut(s) 1330
Fsp4HI GCNGC 2 cut(s) 217, 374
FspBI CTAG 4 cut(s) 504, 832, 930, 1837
FspI TGCGCA 1 cut(s) 569
GlaI GCGC 1 cut(s) 569
GluI GCNGC 2 cut(s) 217, 374
GsaI CCCAGC 2 cut(s) 1354, 1720
HaeIII GGCC 1 cut(s) 2014
HapII CCGG 3 cut(s) 136, 915, 1956
HhaI GCGC 1 cut(s) 570
Hin1II CATG 7 cut(s) 33, 117, 434, 579, 769, 1547, 1746
Hin6I GCGC 1 cut(s) 568
HinP1I GCGC 1 cut(s) 568
HincII GTYRAC 1 cut(s) 1429
HindII GTYRAC 1 cut(s) 1429
HindIII AAGCTT 1 cut(s) 942
HpaII CCGG 3 cut(s) 136, 915, 1956
HphI GGTGA 5 cut(s) 75, 1514, 1584, 1619, 1701
Hpy166II GTNNAC 6 cut(s) 360, 384, 555, 1037, 1429, 1795
Hpy188III TCNNGA 6 cut(s) 123, 1559, 1616, 1773, 1876, 1993
Hpy8I GTNNAC 6 cut(s) 360, 384, 555, 1037, 1429, 1795
HpyCH4III ACNGT 9 cut(s) 249, 552, 602, 1028, 1334, 1406, 1646, 1737, 1752
HpyCH4IV ACGT 4 cut(s) 616, 1473, 1532, 2043
HpyF10VI GCNNNNNNNGC 4 cut(s) 789, 1325, 1610, 1792
HpyF3I CTNAG 9 cut(s) 121, 209, 220, 739, 865, 1357, 1549, 1600, 1929
HpySE526I ACGT 4 cut(s) 616, 1473, 1532, 2043
Hsp92II CATG 7 cut(s) 33, 117, 434, 579, 769, 1547, 1746
HspAI GCGC 1 cut(s) 568
Kzo9I GATC 6 cut(s) 97, 138, 513, 911, 1979, 2236
LguI GCTCTTC 2 cut(s) 864, 1570
LmnI GCTCC 3 cut(s) 788, 1109, 2195
Lsp1109I GCAGC 2 cut(s) 203, 360
LweI GCATC 4 cut(s) 1625, 1715, 1769, 2114
MaeI CTAG 4 cut(s) 504, 832, 930, 1837
MaeII ACGT 4 cut(s) 616, 1473, 1532, 2043
MaeIII GTNAC 5 cut(s) 81, 412, 1452, 1689, 1826
MalI GATC 7 cut(s) 3, 99, 140, 515, 913, 1981, 2238
MboI GATC 6 cut(s) 97, 138, 513, 911, 1979, 2236
MfeI CAATTG 1 cut(s) 1393
MflI RGATCY 2 cut(s) 138, 1979
MhlI GDGCHC 6 cut(s) 651, 1106, 1330, 1742, 1797, 2153
MlyI GAGTC 5 cut(s) 1221, 1605, 1765, 1957, 2079
MmeI TCCRAC 1 cut(s) 2214
MroXI GAANNNNTTC 4 cut(s) 749, 1070, 1289, 1514
MseI TTAA 4 cut(s) 796, 955, 1386, 1966
MspA1I CMGCKG 3 cut(s) 312, 1236, 2229
MspCI CTTAAG 1 cut(s) 795
MspI CCGG 3 cut(s) 136, 915, 1956
MspR9I CCNGG 4 cut(s) 190, 1623, 2169, 2194
MunI CAATTG 1 cut(s) 1393
MvaI CCWGG 4 cut(s) 190, 1623, 2169, 2194
MwoI GCNNNNNNNGC 4 cut(s) 789, 1325, 1610, 1792
NdeI CATATG 1 cut(s) 812
NdeII GATC 6 cut(s) 97, 138, 513, 911, 1979, 2236
NlaIII CATG 7 cut(s) 33, 117, 434, 579, 769, 1547, 1746
NlaIV GGNNCC 4 cut(s) 134, 194, 612, 1620
NmuCI GTSAC 2 cut(s) 81, 1689
NsbI TGCGCA 1 cut(s) 569
NspI RCATGY 1 cut(s) 434
PaeI GCATGC 1 cut(s) 434
PaqCI CACCTGC 1 cut(s) 1595
PciSI GCTCTTC 2 cut(s) 864, 1570
PdmI GAANNNNTTC 4 cut(s) 749, 1070, 1289, 1514
PfeI GAWTC 6 cut(s) 26, 345, 876, 891, 1269, 1380
PflFI GACNNNGTC 1 cut(s) 1947
PflMI CCANNNNNTGG 1 cut(s) 249
PkrI GCNGC 2 cut(s) 218, 375
PleI GAGTC 5 cut(s) 1220, 1604, 1764, 1956, 2079
PpsI GAGTC 5 cut(s) 1220, 1604, 1764, 1956, 2079
Ppu21I YACGTR 1 cut(s) 617
PpuMI RGGWCCY 1 cut(s) 2073
Psp124BI GAGCTC 1 cut(s) 1330
Psp5II RGGWCCY 1 cut(s) 2073
Psp6I CCWGG 4 cut(s) 188, 1621, 2167, 2192
PspFI CCCAGC 2 cut(s) 1350, 1716
PspGI CCWGG 4 cut(s) 188, 1621, 2167, 2192
PspN4I GGNNCC 4 cut(s) 134, 194, 612, 1620
PspPI GGNCC 5 cut(s) 611, 2012, 2073, 2142, 2196
PspPPI RGGWCCY 1 cut(s) 2073
PstNI CAGNNNCTG 2 cut(s) 216, 1928
PsuI RGATCY 2 cut(s) 138, 1979
PsyI GACNNNGTC 1 cut(s) 1947
PvuII CAGCTG 2 cut(s) 1236, 2229
RsaI GTAC 3 cut(s) 450, 919, 1408
RsaNI GTAC 3 cut(s) 449, 918, 1407
SacI GAGCTC 1 cut(s) 1330
SalI GTCGAC 1 cut(s) 1427
SapI GCTCTTC 2 cut(s) 864, 1570
SaqAI TTAA 4 cut(s) 796, 955, 1386, 1966
SatI GCNGC 2 cut(s) 217, 374
Sau3AI GATC 6 cut(s) 97, 138, 513, 911, 1979, 2236
Sau96I GGNCC 5 cut(s) 611, 2012, 2073, 2142, 2196
SchI GAGTC 5 cut(s) 1221, 1605, 1765, 1957, 2079
ScrFI CCNGG 4 cut(s) 190, 1623, 2169, 2194
SduI GDGCHC 6 cut(s) 651, 1106, 1330, 1742, 1797, 2153
SfaNI GCATC 4 cut(s) 1625, 1715, 1769, 2114
SfcI CTRYAG 5 cut(s) 787, 1033, 1274, 1333, 2217
SinI GGWCC 4 cut(s) 611, 2073, 2142, 2196
SmlI CTYRAG 2 cut(s) 321, 795
SmoI CTYRAG 2 cut(s) 321, 795
SpeI ACTAGT 1 cut(s) 929
SphI GCATGC 1 cut(s) 434
SsiI CCGC 4 cut(s) 129, 310, 2010, 2199
SspI AATATT 2 cut(s) 283, 749
SspMI CTAG 4 cut(s) 504, 832, 930, 1837
SstI GAGCTC 1 cut(s) 1330
StyD4I CCNGG 4 cut(s) 188, 1621, 2167, 2192
StyI CCWWGG 2 cut(s) 754, 1836
TaaI ACNGT 9 cut(s) 249, 552, 602, 1028, 1334, 1406, 1646, 1737, 1752
TaiI ACGT 4 cut(s) 619, 1476, 1535, 2046
TaqI TCGA 9 cut(s) 4, 49, 254, 1056, 1263, 1428, 1754, 1821, 2239
TfiI GAWTC 6 cut(s) 26, 345, 876, 891, 1269, 1380
Tru1I TTAA 4 cut(s) 796, 955, 1386, 1966
Tru9I TTAA 4 cut(s) 796, 955, 1386, 1966
TscAI CASTG 5 cut(s) 1337, 1525, 1573, 1740, 2029
TseFI GTSAC 2 cut(s) 81, 1689
TseI GCWGC 2 cut(s) 216, 373
Tsp45I GTSAC 2 cut(s) 81, 1689
TspDTI ATGAA 4 cut(s) 18, 102, 354, 1543
TspGWI ACGGA 1 cut(s) 736
TspRI CASTG 5 cut(s) 1337, 1525, 1573, 1740, 2029
Tth111I GACNNNGTC 1 cut(s) 1947
Van91I CCANNNNNTGG 1 cut(s) 249
Vha464I CTTAAG 1 cut(s) 795
VneI GTGCAC 1 cut(s) 1793
VpaK11BI GGWCC 4 cut(s) 611, 2073, 2142, 2196
XapI RAATTY 7 cut(s) 591, 621, 708, 1768, 1938, 2018, 2222
XceI RCATGY 1 cut(s) 434
XmaJI CCTAGG 1 cut(s) 1836
XmiI GTMKAC 3 cut(s) 554, 1036, 1428
XmnI GAANNNNTTC 4 cut(s) 749, 1070, 1289, 1514
XspI CTAG 4 cut(s) 504, 832, 930, 1837
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.