Rh4BG124200

metal ion binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
OG0000343
Physical Location & Seq
Forward (+)
20752499 .. 20762294
9796 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG124200.1

Sequence Viewer

Length: 1602 bp
ATGTTTGGCTATGTCTGCGCTTTGTGTCATGATGGCGGTGACCTCTTGTGTTGTGAAGGGAGGTGCCTAAGGACATTTCATGCAACTCCAGAGACTGGTCAGGACTCTGATTGCGTATCTCTTGGCTTTACGAAGGATGCAGTAGATGCAATGCCTAATTTCTTATGCCAGAACTGCAAATACAAACAACACCAGTGCTTTGTTTGTGGAGAGTTGGGATCTTCAGACAAATCTTCAGGTGCTGCTGAGGTTGTTCCCTGTGTTTCTCCGGTATGTGGTCAATTCTACCATCCACATTGTGTTGCAAAAGAACTTTCTCAAGATAGTGGAGTTCCTGCTGAAGAACTTGAGAAAAAGATTACAATGGGAGAATCTTTTACATGTCCAGTTCATAAGTGCCGCGTTTGTAAACAAGGAGCAAATATTAAGGATCACGGTTTACAATTTGCTGTGTGCATGCTCTGTCCCAAGTCATACCACAGGAAATGCCTGCCAAGTTTTATTCCTTTCGAAGACAAAGACGGAACATGTGGTGAAGGAAAATTAGTAACAAGAGCTTGGGACGGAATAATGCCTAACCGTATACTAATATATTGCATAAAACACGAGGAAGATAAAACAACTAAATTTTTTGTAAGGGACCACATAAAATTTCCTGCTGTTAAAGAGAAGAGGAAACTGACACCACAGTCTATTGTAGACAGAGAGCAAGTTGCGTCTATGATGATAAATCCTTCATTGGAAGAATCATACAGAGAAAGAACTGCAAACACAGAATTCAAACAGAAGGAGAAGCCATCTTTTGCTAGAAAGCGTGGAAATTTGGATGCACCTAATACAGATACAAAAAGGAGAATATTGGGCTTAATGGAAAAGGCTGCATCTTCAATAACCTTGAAAGATATATTAAGGAAGTACCCAGTTCCATCTCATACTTACTCCATGAAAAATGTTGTGGACACGAAAATGTCATTGGGAAAGGTGGAAGTCTCGATTGAGGCCGCTAGAACAGCATTGAGAAAACTAGATGAAGGGTGCAGTACCAAAGATGCAGAAGCTGTTTGTGGGCCTGAGGTTCTTAAACAGATATTTAGATGGAAGACAAAGATGAATGTTTATCTCGGTCCTTTCCTTCATGGCATGCGCTACACATCCTTTGGTCGCCATTTTACGAATGTGGAGAAACTAAAACAGATTGTAGATAAGCTCCATTGGTATGTGAAGACCGGAGATATGATTGTGGACTTTTGCTGTGGTGCTAATGACTTCAGTGTCATTATGAAAAAAAAGCTTGAAGAGACGGGAAAGAATTGCTACTACAAGAACTATGACCTTTTTCAAGCTAAGAATGATTTTAATTTCGAAAAGAAGGACTGGATGACTGTCCAGAGGGAGGAGCTACCCGTGGGATCTCGGTTGATCATGGGGCTGAACCCTCCTTTTGGAGTTAAAGCATCTCGGGCGAACCAGTTCATTGATAAGGCTCTCGGGTTTAATCCAAAGCTCCTAATTCTTATTGTTCCATCAGAAACACAAAGGTACTATGCAGTTGTTCCTCTATCTGATCTCTCTTACGCACATGCATGCAAATTATGGGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006325 GO:0006355 GO:0006950 GO:0006952 GO:0006996 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0009605 GO:0009607 GO:0009620 GO:0009791 GO:0009889 GO:0009893 GO:0009909 GO:0009911 GO:0009987 GO:0010228 GO:0010468 GO:0010556 GO:0010604 GO:0010638 GO:0016043 GO:0019219 GO:0019222 GO:0022414 GO:0023052 GO:0030154 GO:0031056 GO:0031058 GO:0031060 GO:0031062 GO:0031323 GO:0031325 GO:0031326 GO:0031399 GO:0031401 GO:0031440 GO:0031935 GO:0031937 GO:0032268 GO:0032270 GO:0032501 GO:0032502 GO:0033043 GO:0033044 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0043954 GO:0044030 GO:0044424 GO:0044464 GO:0048366 GO:0048367 GO:0048468 GO:0048518 GO:0048522 GO:0048580 GO:0048582 GO:0048608 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0048869 GO:0050684 GO:0050789 GO:0050793 GO:0050794 GO:0050832 GO:0050896 GO:0051052 GO:0051094 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051239 GO:0051240 GO:0051246 GO:0051247 GO:0051252 GO:0051276 GO:0051570 GO:0051574 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0060968 GO:0061085 GO:0061087 GO:0061458 GO:0065007 GO:0070827 GO:0070828 GO:0070829 GO:0071840 GO:0080090 GO:0090436 GO:0097159 GO:0098542 GO:0099402 GO:0140110 GO:1900109 GO:1900111 GO:1900363 GO:1901363 GO:1902275 GO:1903311 GO:1903506 GO:1905269 GO:2000024 GO:2000026 GO:2000112 GO:2000241 GO:2000243 GO:2001141 GO:2001252
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DNMT1-RFD

Protein Analysis

533

Amino Acids

60.33

Weight (kDa)

8.78

Isoelectric Point (pI)

39.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PHD_NSD PF22908 62 - 131 1.3e-18 Histone-lysine N-methyltransferase NSD-like, PHD zinc finger
Mtase_EDM2 PF26055 406 - 514 2.5e-58 EDM2 methyltransferase-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000343)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48090 AT5G48090 AT5G48090 AT5G55390 AT5G55390 AT5G55390
fragaria_vesca FvH4_3g23690 FvH4_4g08730 FvH4_4g08730 FvH4_4g08730 FvH4_4g08730 FvH4_4g08730 FvH4_4g08730 FvH4_5g31160 FvH4_5g31160 FvH4_5g31160 FvH4_5g31160 FvH4_5g31160
malus_domestica MD03G1191000.v1.1 MD11G1207800.v1.1 MD11G1208000.v1.1
prunus_persica Prupe.4G227500_v2.0.a1 Prupe.4G227500_v2.0.a1 Prupe.4G227500_v2.0.a1 Prupe.4G227500_v2.0.a1 Prupe.4G227500_v2.0.a1 Prupe.4G227500_v2.0.a1 Prupe.4G227600_v2.0.a1 Prupe.4G227700_v2.0.a1 Prupe.4G227800_v2.0.a1 Prupe.4G227800_v2.0.a1 Prupe.4G227800_v2.0.a1 Prupe.4G227800_v2.0.a1 Prupe.4G227800_v2.0.a1
pyrus_communis pycom01g03400 pycom03g14420 pycom11g18100 pycom11g18140 pycom11g18150 pycom11g18160
rosa_chinensis RchiOBHm_Chr2g0145981 RchiOBHm_Chr4g0405241 RchiOBHm_Chr4g0405271 RchiOBHm_Chr5g0016201 RchiOBHm_Chr5g0041831 RchiOBHm_Chr5g0041871 RchiOBHm_Chr5g0041881 RchiOBHm_Chr5g0059241
rosa_laevigata RLG00000002117 RLG00000008861 RLG00000008862 RLG00000011000 RLG00000033216 RLG00000034097 RLG00000034101
rosa_multiflora Rmu_sc0000161.1_g000001 Rmu_sc0000861.1_g000040 Rmu_sc0007522.1_g000003 Rmu_sc0009443.1_g000015 Rmu_sc0022129.1_g000001 Rmu_sc0042315.1_g000001
rosa_roxburghii Rroxscaffold_1G00038660 Rroxscaffold_1G00038690 Rroxscaffold_5G00349560 Rroxscaffold_5G00349610 Rroxscaffold_6G00388370 Rroxscaffold_7G00188740
rosa_rugosa Rorug03G0199700 Rorug04G0055400 Rorug04G0055500 Rorug04G0055900 Rorug04G0056000 Rorug04G0056100 Rorug04G0056100 Rorug04G0056200 Rorug05G0195600 Rorug05G0195700 Rorug05G0195800 Rorug05G0195900 Rorug05G0196800 Rorug05G0385000
rosa_samantha Rh4AG129900 Rh4AG130100 Rh4BG124200 Rh4BG124400 Rh4BG124500 Rh4CG137200 Rh4CG137300 Rh4DG123500 Rh4DG123700 Rh5AG280800 Rh5AG281400 Rh5BG286700 Rh5BG287000 Rh5BG397800 Rh5CG318100 Rh5CG318600 Rh5CG421600 Rh5DG132300 Rh5DG132400 Rh5DG295400 Rh5DG295700 Rh7BG475300
rosa_wichuraiana Rw0G001330 Rw0G005730 Rw4G008670 Rw4G010510 Rw4G010540 Rw5G026450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 688, 1271
AccB1I GGYRCC 1 cut(s) 63
AccB7I CCANNNNNTGG 1 cut(s) 95
AccI GTMKAC 2 cut(s) 583, 699
AccII CGCG 1 cut(s) 402
AciI CCGC 3 cut(s) 36, 400, 1002
AclWI GGATC 3 cut(s) 226, 438, 1417
AcsI RAATTY 4 cut(s) 626, 650, 776, 820
AcuI CTGAAG 4 cut(s) 207, 219, 360, 1252
AdeI CACNNNGTG 1 cut(s) 299
AfaI GTAC 3 cut(s) 917, 1042, 1541
AfiI CCNNNNNNNGG 4 cut(s) 95, 275, 1393, 1442
AflIII ACRYGT 2 cut(s) 380, 527
AgsI TTSAA 5 cut(s) 781, 888, 898, 1295, 1340
AjuI GAANNNNNNNTTGG 2 cut(s) 956, 988
AluBI AGCT 7 cut(s) 557, 1058, 1207, 1291, 1343, 1399, 1504
AluI AGCT 7 cut(s) 557, 1058, 1207, 1291, 1343, 1399, 1504
Alw26I GTCTC 3 cut(s) 86, 994, 1292
AlwI GGATC 3 cut(s) 226, 438, 1417
AlwNI CAGNNNCTG 3 cut(s) 95, 242, 1058
Ama87I CYCGRG 2 cut(s) 1458, 1487
AoxI GGCC 2 cut(s) 999, 1067
ApeKI GCWGC 2 cut(s) 242, 878
ApoI RAATTY 4 cut(s) 626, 650, 776, 820
Asp700I GAANNNNTTC 1 cut(s) 1469
AspLEI GCGC 2 cut(s) 20, 1146
AspS9I GGNCC 3 cut(s) 640, 1067, 1124
AsuHPI GGTGA 2 cut(s) 50, 545
AsuII TTCGAA 2 cut(s) 510, 1362
AvaI CYCGRG 2 cut(s) 1458, 1487
AvaII GGWCC 2 cut(s) 640, 1124
AxyI CCTNAGG 2 cut(s) 68, 1071
BanI GGYRCC 1 cut(s) 63
BauI CACGAG 1 cut(s) 605
BbsI GAAGAC 3 cut(s) 519, 1106, 1229
BbvCI CCTCAGC 1 cut(s) 246
BbvI GCAGC 2 cut(s) 229, 865
BccI CCATC 6 cut(s) 26, 297, 805, 934, 1089, 1531
BclI TGATCA 1 cut(s) 1419
BcoDI GTCTC 3 cut(s) 86, 994, 1292
BfaI CTAG 3 cut(s) 807, 1005, 1025
BisI GCNGC 4 cut(s) 243, 400, 879, 1002
BlsI GCNGC 4 cut(s) 244, 401, 880, 1003
Bme18I GGWCC 2 cut(s) 640, 1124
BmeT110I CYCGRG 2 cut(s) 1458, 1487
BmgT120I GGNCC 3 cut(s) 640, 1067, 1124
BmiI GGNNCC 2 cut(s) 65, 641
BmrI ACTGGG 1 cut(s) 914
BmsI GCATC 6 cut(s) 127, 136, 817, 890, 1039, 1463
BmuI ACTGGG 1 cut(s) 914
BpiI GAAGAC 3 cut(s) 519, 1106, 1229
BpmI CTGGAG 1 cut(s) 72
Bpu10I CCTNAGC 1 cut(s) 246
Bpu14I TTCGAA 2 cut(s) 510, 1362
BpuEI CTTGAG 2 cut(s) 303, 368
BsaJI CCNNGG 1 cut(s) 1404
BsaWI WCCGGW 2 cut(s) 268, 1226
Bsc4I CCNNNNNNNGG 4 cut(s) 95, 275, 1393, 1442
Bse1I ACTGG 6 cut(s) 100, 193, 386, 920, 1379, 1468
Bse21I CCTNAGG 2 cut(s) 68, 1071
Bse3DI GCAATG 1 cut(s) 156
BseDI CCNNGG 1 cut(s) 1404
BseGI GGATG 5 cut(s) 142, 289, 832, 1151, 1383
BseLI CCNNNNNNNGG 4 cut(s) 95, 275, 1393, 1442
BseMI GCAATG 1 cut(s) 156
BseMII CTCAG 2 cut(s) 237, 1062
BseNI ACTGG 6 cut(s) 100, 193, 386, 920, 1379, 1468
BseRI GAGGAG 1 cut(s) 1409
BseXI GCAGC 2 cut(s) 229, 865
BsgI GTGCAG 1 cut(s) 1057
Bsh1236I CGCG 1 cut(s) 402
BshFI GGCC 2 cut(s) 1001, 1069
BshNI GGYRCC 1 cut(s) 63
BsiHKCI CYCGRG 2 cut(s) 1458, 1487
BsiSI CCGG 2 cut(s) 269, 1227
BslFI GGGAC 3 cut(s) 450, 575, 653
BslI CCNNNNNNNGG 4 cut(s) 95, 275, 1393, 1442
BsmAI GTCTC 3 cut(s) 86, 994, 1292
BsmBI CGTCTC 1 cut(s) 1292
BsmFI GGGAC 3 cut(s) 450, 575, 653
BsnI GGCC 2 cut(s) 1001, 1069
BsoBI CYCGRG 2 cut(s) 1458, 1487
Bsp119I TTCGAA 2 cut(s) 510, 1362
Bsp143I GATC 5 cut(s) 218, 430, 1409, 1419, 1564
BspACI CCGC 3 cut(s) 36, 400, 1002
BspANI GGCC 2 cut(s) 1001, 1069
BspCNI CTCAG 2 cut(s) 238, 1063
BspFNI CGCG 1 cut(s) 402
BspHI TCATGA 1 cut(s) 28
BspLI GGNNCC 2 cut(s) 65, 641
BspPI GGATC 3 cut(s) 226, 438, 1417
BspT104I TTCGAA 2 cut(s) 510, 1362
BspT107I GGYRCC 1 cut(s) 63
BsrDI GCAATG 1 cut(s) 156
BsrI ACTGG 6 cut(s) 100, 193, 386, 920, 1379, 1468
BssECI CCNNGG 1 cut(s) 1404
BssMI GATC 5 cut(s) 218, 430, 1409, 1419, 1564
BssNAI GTATAC 1 cut(s) 584
BssSI CACGAG 1 cut(s) 605
Bst1107I GTATAC 1 cut(s) 584
Bst2BI CACGAG 1 cut(s) 605
Bst4CI ACNGT 4 cut(s) 437, 581, 690, 1384
Bst6I CTCTTC 2 cut(s) 665, 1290
BstAPI GCANNNNNTGC 1 cut(s) 146
BstBI TTCGAA 2 cut(s) 510, 1362
BstC8I GCNNGC 4 cut(s) 458, 491, 1142, 1585
BstDEI CTNAG 4 cut(s) 68, 246, 1071, 1344
BstDSI CCRYGG 1 cut(s) 1404
BstEII GGTNACC 1 cut(s) 38
BstF5I GGATG 5 cut(s) 142, 289, 832, 1151, 1383
BstFNI CGCG 1 cut(s) 402
BstHHI GCGC 2 cut(s) 20, 1146
BstKTI GATC 5 cut(s) 221, 433, 1412, 1422, 1567
BstMAI GTCTC 3 cut(s) 86, 994, 1292
BstMBI GATC 5 cut(s) 218, 430, 1409, 1419, 1564
BstMWI GCNNNNNNNGC 5 cut(s) 15, 146, 174, 1010, 1460
BstNSI RCATGY 6 cut(s) 384, 460, 531, 1144, 1583, 1587
BstPI GGTNACC 1 cut(s) 38
BstUI CGCG 1 cut(s) 402
BstV1I GCAGC 2 cut(s) 229, 865
BstV2I GAAGAC 3 cut(s) 519, 1106, 1229
BstX2I RGATCY 2 cut(s) 218, 1409
BstYI RGATCY 2 cut(s) 218, 1409
BstZ17I GTATAC 1 cut(s) 584
Bsu36I CCTNAGG 2 cut(s) 68, 1071
BsuRI GGCC 2 cut(s) 1001, 1069
BtgI CCRYGG 1 cut(s) 1404
BtsCI GGATG 5 cut(s) 142, 289, 832, 1151, 1383
BtsIMutI CAGTG 2 cut(s) 200, 1276
Cac8I GCNNGC 4 cut(s) 458, 491, 1142, 1585
CaiI CAGNNNCTG 3 cut(s) 95, 242, 1058
CciI TCATGA 1 cut(s) 28
CfoI GCGC 2 cut(s) 20, 1146
Cfr13I GGNCC 3 cut(s) 640, 1067, 1124
CseI GACGC 1 cut(s) 705
Csp6I GTAC 3 cut(s) 916, 1041, 1540
CviQI GTAC 3 cut(s) 916, 1041, 1540
DdeI CTNAG 4 cut(s) 68, 246, 1071, 1344
DpnI GATC 5 cut(s) 220, 432, 1411, 1421, 1566
DpnII GATC 5 cut(s) 218, 430, 1409, 1419, 1564
DraIII CACNNNGTG 1 cut(s) 299
DrdI GACNNNNNNGTC 2 cut(s) 688, 1271
DseDI GACNNNNNNGTC 2 cut(s) 688, 1271
Eam1104I CTCTTC 2 cut(s) 665, 1290
EarI CTCTTC 2 cut(s) 665, 1290
Eco47I GGWCC 2 cut(s) 640, 1124
Eco57I CTGAAG 4 cut(s) 207, 219, 360, 1252
Eco81I CCTNAGG 2 cut(s) 68, 1071
Eco88I CYCGRG 2 cut(s) 1458, 1487
Eco91I GGTNACC 1 cut(s) 38
EcoO65I GGTNACC 1 cut(s) 38
EcoRI GAATTC 1 cut(s) 776
EcoT22I ATGCAT 1 cut(s) 1585
Esp3I CGTCTC 1 cut(s) 1292
FaqI GGGAC 3 cut(s) 450, 575, 653
FbaI TGATCA 1 cut(s) 1419
FblI GTMKAC 2 cut(s) 583, 699
Fnu4HI GCNGC 4 cut(s) 243, 400, 879, 1002
FokI GGATG 5 cut(s) 149, 276, 839, 1138, 1390
Fsp4HI GCNGC 4 cut(s) 243, 400, 879, 1002
FspBI CTAG 3 cut(s) 807, 1005, 1025
GlaI GCGC 2 cut(s) 19, 1145
GluI GCNGC 4 cut(s) 243, 400, 879, 1002
GsuI CTGGAG 1 cut(s) 72
HaeIII GGCC 2 cut(s) 1001, 1069
HapII CCGG 2 cut(s) 269, 1227
HgaI GACGC 1 cut(s) 705
HhaI GCGC 2 cut(s) 20, 1146
Hin6I GCGC 2 cut(s) 18, 1144
HinP1I GCGC 2 cut(s) 18, 1144
HindIII AAGCTT 1 cut(s) 1289
HinfI GANTC 3 cut(s) 104, 371, 746
HpaII CCGG 2 cut(s) 269, 1227
HphI GGTGA 2 cut(s) 50, 545
Hpy166II GTNNAC 6 cut(s) 410, 440, 584, 700, 958, 1243
Hpy188I TCNGA 4 cut(s) 109, 226, 1528, 1564
Hpy188III TCNNGA 6 cut(s) 29, 89, 101, 320, 991, 1387
Hpy8I GTNNAC 6 cut(s) 410, 440, 584, 700, 958, 1243
HpyAV CCTTC 8 cut(s) 50, 127, 530, 744, 781, 1025, 1142, 1363
HpyCH4III ACNGT 4 cut(s) 437, 581, 690, 1384
HpyF10VI GCNNNNNNNGC 5 cut(s) 15, 146, 174, 1010, 1460
HpyF3I CTNAG 4 cut(s) 68, 246, 1071, 1344
HspAI GCGC 2 cut(s) 18, 1144
Ksp22I TGATCA 1 cut(s) 1419
Kzo9I GATC 5 cut(s) 218, 430, 1409, 1419, 1564
LmnI GCTCC 4 cut(s) 416, 1212, 1396, 1509
Lsp1109I GCAGC 2 cut(s) 229, 865
LweI GCATC 6 cut(s) 127, 136, 817, 890, 1039, 1463
MaeI CTAG 3 cut(s) 807, 1005, 1025
MaeIII GTNAC 2 cut(s) 38, 547
MalI GATC 5 cut(s) 220, 432, 1411, 1421, 1566
MboI GATC 5 cut(s) 218, 430, 1409, 1419, 1564
MflI RGATCY 2 cut(s) 218, 1409
MlyI GAGTC 1 cut(s) 98
Mph1103I ATGCAT 1 cut(s) 1585
MroXI GAANNNNTTC 1 cut(s) 1469
MseI TTAA 8 cut(s) 426, 663, 866, 908, 1080, 1356, 1449, 1494
MslI CAYNNNNRTG 3 cut(s) 965, 1215, 1582
MspI CCGG 2 cut(s) 269, 1227
MvnI CGCG 1 cut(s) 402
MwoI GCNNNNNNNGC 5 cut(s) 15, 146, 174, 1010, 1460
NdeII GATC 5 cut(s) 218, 430, 1409, 1419, 1564
NlaIV GGNNCC 2 cut(s) 65, 641
NmuCI GTSAC 1 cut(s) 38
NsiI ATGCAT 1 cut(s) 1585
NspI RCATGY 6 cut(s) 384, 460, 531, 1144, 1583, 1587
NspV TTCGAA 2 cut(s) 510, 1362
PaeI GCATGC 3 cut(s) 460, 1144, 1587
PagI TCATGA 1 cut(s) 28
PciI ACATGT 2 cut(s) 380, 527
PdmI GAANNNNTTC 1 cut(s) 1469
PfeI GAWTC 2 cut(s) 371, 746
PflMI CCANNNNNTGG 1 cut(s) 95
PkrI GCNGC 4 cut(s) 244, 401, 880, 1003
PleI GAGTC 1 cut(s) 98
PpsI GAGTC 1 cut(s) 98
PscI ACATGT 2 cut(s) 380, 527
PspEI GGTNACC 1 cut(s) 38
PspN4I GGNNCC 2 cut(s) 65, 641
PspPI GGNCC 3 cut(s) 640, 1067, 1124
PsrI GAACNNNNNNTAC 2 cut(s) 164, 196
PstNI CAGNNNCTG 3 cut(s) 95, 242, 1058
PsuI RGATCY 2 cut(s) 218, 1409
RsaI GTAC 3 cut(s) 917, 1042, 1541
RsaNI GTAC 3 cut(s) 916, 1041, 1540
RseI CAYNNNNRTG 3 cut(s) 965, 1215, 1582
SaqAI TTAA 8 cut(s) 426, 663, 866, 908, 1080, 1356, 1449, 1494
SatI GCNGC 4 cut(s) 243, 400, 879, 1002
Sau3AI GATC 5 cut(s) 218, 430, 1409, 1419, 1564
Sau96I GGNCC 3 cut(s) 640, 1067, 1124
SchI GAGTC 1 cut(s) 98
SfaNI GCATC 6 cut(s) 127, 136, 817, 890, 1039, 1463
SfuI TTCGAA 2 cut(s) 510, 1362
SinI GGWCC 2 cut(s) 640, 1124
SmiMI CAYNNNNRTG 3 cut(s) 965, 1215, 1582
SmlI CTYRAG 2 cut(s) 318, 347
SmoI CTYRAG 2 cut(s) 318, 347
SphI GCATGC 3 cut(s) 460, 1144, 1587
SsiI CCGC 3 cut(s) 36, 400, 1002
SspI AATATT 2 cut(s) 424, 858
SspMI CTAG 3 cut(s) 807, 1005, 1025
TaaI ACNGT 4 cut(s) 437, 581, 690, 1384
TaqI TCGA 3 cut(s) 510, 992, 1362
TaqII GACCGA 1 cut(s) 1112
TauI GCSGC 2 cut(s) 402, 1004
TfiI GAWTC 2 cut(s) 371, 746
Tru1I TTAA 8 cut(s) 426, 663, 866, 908, 1080, 1356, 1449, 1494
Tru9I TTAA 8 cut(s) 426, 663, 866, 908, 1080, 1356, 1449, 1494
TscAI CASTG 2 cut(s) 200, 1276
TseFI GTSAC 1 cut(s) 38
TseI GCWGC 2 cut(s) 242, 878
Tsp45I GTSAC 1 cut(s) 38
TspDTI ATGAA 9 cut(s) 68, 380, 726, 959, 1044, 1124, 1124, 1295, 1462
TspGWI ACGGA 2 cut(s) 537, 579
TspRI CASTG 2 cut(s) 200, 1276
Van91I CCANNNNNTGG 1 cut(s) 95
VpaK11BI GGWCC 2 cut(s) 640, 1124
XapI RAATTY 4 cut(s) 626, 650, 776, 820
XceI RCATGY 6 cut(s) 384, 460, 531, 1144, 1583, 1587
XmiI GTMKAC 2 cut(s) 583, 699
XmnI GAANNNNTTC 1 cut(s) 1469
XspI CTAG 3 cut(s) 807, 1005, 1025
Zsp2I ATGCAT 1 cut(s) 1585
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.