pycom11g18150

metal ion binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0000343
Physical Location & Seq
Forward (+)
20377902 .. 20388111
10210 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g18150.17

Sequence Viewer

Length: 2400 bp
ATGTCAAATCACATCAAGTTGTTTGAACATATAAATTGTATTGCAGTAATAGGTAGAAGTGGCACACTGCATAATCTTTTATTCAGTTGGGGTATTATGGTGGTTATGGTTGGTATTCTTCAATATAGGTTTTCAATCTGGATTTTGGATTTTTACTCAATTTACTTGAAGAGAAGACCAACAAGAGGAAACTATATGATCAGTCAGGACATTCAAGCTACAACAAAACCAGGATTTATAGTTGATGATGCGGAAGAAGATATGATTGACGCTGAAGACGAGTCCAACGACGATGATAACCTGTTTGATTCTGTTTGTGCTTTTTGTGATGATGGTGGCACTCTATTGCATTGTGAAGGGAGATGCCTAAGGTCATTTCACGCAACTGTCGAGGATGGTGAGCATTCTATGTGTGAGACCCTTGGCTTTACCCAGGATGAAGTAGAAGCGATTCAAAAATTCTTCTGCAAGAACTGTCATTATAAACAGCATCAATGCTATGCTTGTGGGAAGTTAGGCTCCTCTGATAAATCTTCAGGGGCTGAGGTCTTCCCCTGTGTTTCTGGAACCTGTGGTCAATTTTACCATCCACATTGCATTGCAAAACTCATTTATAAAGACGATGGAGTCTCTGCTGAAGAACTTGAGAAAAAAATTGATCTGGGGGAATCTTTTACGTGTCCGATTCATAAATGCTGCATTTGTGAACAAGGAGAGAACAAGAAGGATCCTCAGTTGCAGTTTGCTGTGTGTCGGCGTTGTCCTAAATCCTACCACAGGAAATGCTTGCCAGAGGAGATTGTATTTCAAAAAACAGAGGAAGACGAAGGGGAGGAAGACACAGAGGATGAAGGTGCAACAACAAGAGCTTGGGAAGGTCTATTACCTAACCGTGTACTAATATATTGCACAAAGCATGAGATGATTAAAGACATTGAAACGCCAATAAGGGACCACATAAAATTCCCTGGAGTTAAAGAAAAGAGGACTACTTTTATTCAAAAGAAGACCGATTTTGTAGAGAAAAAGAAAAAACGGACATCAGAATCCCTTCAAGATAGAGAGATATCTGTGACGAATAAGAGGAAGCTTTCTGCCAAAGAATTCTATAGGGGCCAAACTGCTCCTATGATATCTAAAGAGAAGCTGAAGTCATCTTCTACCGCAAAAGTGGGTGGTAGCAGAATTAGTAAAAAACTACCTGCTGGGTTAGATACATCAGGAAAGCTGAAAGTGAATTGTGCTTTGAAAAAGAAAGCTAAGATTTCTGTGGCTGCGGAACAAAATACCTCATTGGGTGATCAGCTATATGCCTGTAGGAAGGAGTCTTTGCAAGTGAAGTCGGGGAAGCAGGGAAAACCTGATGGGGAGCGTGATTTGGCAATATTTAATCCTGCCTCAAAAAAGTTGACCAGCGCACCACCATCTTTAGATGCAGCTACAGAGAGGAGGCTATTGTCTTTAATGAAAGATGCTGCGTCTTCAATAACTCTGGAAGATGTTATAAGAAAGCACACAGTTCCATCGACTCATCAATCCTCGTCCAAAAATGTTGTGGAAAGGAACATTACAATGGGAAAGGTAGAAGGCTCAATTGAGGCTGTTCGAATGGCATTACGGAAACTAGAGGAAGGATGCAGTGCTGAAGATTCAGAGGCTGTTTGTGCTCCTGAGGTTGTTCACCAGATTTACAAGTGGAAGCCAAAACAAGCTGAGAGTATATCTTGCACCTTTCATGCATGGAATGCGCTACACGTCCTTTGGTCGTCATTTTACAAAGGTGGACAAATTAAAAGAGCTTGGATTGCTGACAGGCTCCATTGGTACGCAAAAGATGGAGATACGATAGTGGACTTCTGTTGTGGTGCCAATGATTTCAGCATTGTAATGAAGAAGAAACTTGAAGAGACGGGGAAGAATTGCTTTTATAAAAACTATGACTTTATTCAACCGAAGAATGATTTCTGTTTTGAGAAGAGAGATTGGATGAAAGTAAAACCAAAGGAATTACCGAAAGGGTCACAATTGATCATGGGGTTAAACCCTCCTTTCGGAGTTAAAGCAGCTTTGGCAAACAAGTTCATTGACAAGGCTCTTGAGTTCAATCCAAAGCTCCTTATTCTTATTGTTCCACCAGAAACTCAAAGGTTAAATGAAAAGAAATCGGCTTATGATTTGATCTGGGAGGATACCCAGTTTCTGTCAGGAAAGTCTTTTTATCTCCCCGGATCTGTTGATGCGAATGACAAACAATTGGATCAATGGAATGTAATGCCGCCACCACTCTATATCTGGAGTCGTCCTGATTGGTCTGCTGACATCAAGGCTATAGCCCAAGAGCATGGTCACATCACTGCATCACAAGGGTATACAAAAGATCGATTCCGACTCTTTAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006325 GO:0006355 GO:0006950 GO:0006952 GO:0006996 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0009605 GO:0009607 GO:0009620 GO:0009791 GO:0009889 GO:0009893 GO:0009909 GO:0009911 GO:0009987 GO:0010228 GO:0010468 GO:0010556 GO:0010604 GO:0010638 GO:0016043 GO:0019219 GO:0019222 GO:0022414 GO:0023052 GO:0030154 GO:0031056 GO:0031058 GO:0031060 GO:0031062 GO:0031323 GO:0031325 GO:0031326 GO:0031399 GO:0031401 GO:0031440 GO:0031935 GO:0031937 GO:0032268 GO:0032270 GO:0032501 GO:0032502 GO:0033043 GO:0033044 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0043954 GO:0044030 GO:0044424 GO:0044464 GO:0048366 GO:0048367 GO:0048468 GO:0048518 GO:0048522 GO:0048580 GO:0048582 GO:0048608 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0048869 GO:0050684 GO:0050789 GO:0050793 GO:0050794 GO:0050832 GO:0050896 GO:0051052 GO:0051094 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051239 GO:0051240 GO:0051246 GO:0051247 GO:0051252 GO:0051276 GO:0051570 GO:0051574 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0060968 GO:0061085 GO:0061087 GO:0061458 GO:0065007 GO:0070827 GO:0070828 GO:0070829 GO:0071840 GO:0080090 GO:0090436 GO:0097159 GO:0098542 GO:0099402 GO:0140110 GO:1900109 GO:1900111 GO:1900363 GO:1901363 GO:1902275 GO:1903311 GO:1903506 GO:1905269 GO:2000024 GO:2000026 GO:2000112 GO:2000241 GO:2000243 GO:2001141 GO:2001252
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DNMT1-RFD

Protein Analysis

800

Amino Acids

90.51

Weight (kDa)

8.16

Isoelectric Point (pI)

45.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000343)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48090 AT5G48090 AT5G48090 AT5G55390 AT5G55390 AT5G55390
fragaria_vesca FvH4_3g23690 FvH4_4g08730 FvH4_4g08730 FvH4_4g08730 FvH4_4g08730 FvH4_4g08730 FvH4_4g08730 FvH4_5g31160 FvH4_5g31160 FvH4_5g31160 FvH4_5g31160 FvH4_5g31160
malus_domestica MD03G1191000.v1.1 MD11G1207800.v1.1 MD11G1208000.v1.1
prunus_persica Prupe.4G227500_v2.0.a1 Prupe.4G227500_v2.0.a1 Prupe.4G227500_v2.0.a1 Prupe.4G227500_v2.0.a1 Prupe.4G227500_v2.0.a1 Prupe.4G227500_v2.0.a1 Prupe.4G227600_v2.0.a1 Prupe.4G227700_v2.0.a1 Prupe.4G227800_v2.0.a1 Prupe.4G227800_v2.0.a1 Prupe.4G227800_v2.0.a1 Prupe.4G227800_v2.0.a1 Prupe.4G227800_v2.0.a1
pyrus_communis pycom01g03400 pycom03g14420 pycom11g18100 pycom11g18140 pycom11g18150 pycom11g18160
rosa_chinensis RchiOBHm_Chr2g0145981 RchiOBHm_Chr4g0405241 RchiOBHm_Chr4g0405271 RchiOBHm_Chr5g0016201 RchiOBHm_Chr5g0041831 RchiOBHm_Chr5g0041871 RchiOBHm_Chr5g0041881 RchiOBHm_Chr5g0059241
rosa_laevigata RLG00000002117 RLG00000008861 RLG00000008862 RLG00000011000 RLG00000033216 RLG00000034097 RLG00000034101
rosa_multiflora Rmu_sc0000161.1_g000001 Rmu_sc0000861.1_g000040 Rmu_sc0007522.1_g000003 Rmu_sc0009443.1_g000015 Rmu_sc0022129.1_g000001 Rmu_sc0042315.1_g000001
rosa_roxburghii Rroxscaffold_1G00038660 Rroxscaffold_1G00038690 Rroxscaffold_5G00349560 Rroxscaffold_5G00349610 Rroxscaffold_6G00388370 Rroxscaffold_7G00188740
rosa_rugosa Rorug03G0199700 Rorug04G0055400 Rorug04G0055500 Rorug04G0055900 Rorug04G0056000 Rorug04G0056100 Rorug04G0056100 Rorug04G0056200 Rorug05G0195600 Rorug05G0195700 Rorug05G0195800 Rorug05G0195900 Rorug05G0196800 Rorug05G0385000
rosa_samantha Rh4AG129900 Rh4AG130100 Rh4BG124200 Rh4BG124400 Rh4BG124500 Rh4CG137200 Rh4CG137300 Rh4DG123500 Rh4DG123700 Rh5AG280800 Rh5AG281400 Rh5BG286700 Rh5BG287000 Rh5BG397800 Rh5CG318100 Rh5CG318600 Rh5CG421600 Rh5DG132300 Rh5DG132400 Rh5DG295400 Rh5DG295700 Rh7BG475300
rosa_wichuraiana Rw0G001330 Rw0G005730 Rw4G008670 Rw4G010510 Rw4G010540 Rw5G026450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 483, 615, 1505, 1929
AasI GACNNNNNNGTC 1 cut(s) 626
Acc36I ACCTGC 1 cut(s) 1210
AccB1I GGYRCC 1 cut(s) 1865
AccI GTMKAC 1 cut(s) 2369
AciI CCGC 4 cut(s) 251, 1164, 1277, 2276
AclWI GGATC 4 cut(s) 722, 735, 2236, 2265
AcsI RAATTY 3 cut(s) 458, 962, 1103
AcuI CTGAAG 5 cut(s) 294, 519, 657, 1169, 1665
AfaI GTAC 2 cut(s) 897, 1826
AfiI CCNNNNNNNGG 3 cut(s) 185, 777, 2051
AflIII ACRYGT 2 cut(s) 677, 1753
AjiI CACGTC 1 cut(s) 1756
AjnI CCWGG 3 cut(s) 229, 432, 967
Alw21I GWGCWC 1 cut(s) 1669
Alw26I GTCTC 3 cut(s) 410, 634, 1901
AlwI GGATC 4 cut(s) 722, 735, 2236, 2265
AlwNI CAGNNNCTG 3 cut(s) 542, 1658, 2200
AoxI GGCC 1 cut(s) 1114
ApeKI GCWGC 5 cut(s) 696, 1274, 1436, 1475, 2063
ApoI RAATTY 3 cut(s) 458, 962, 1103
Asp700I GAANNNNTTC 3 cut(s) 450, 1050, 1961
AspLEI GCGC 2 cut(s) 1418, 1750
AspS9I GGNCC 2 cut(s) 952, 1114
AsuC2I CCSGG 1 cut(s) 2226
AsuHPI GGTGA 3 cut(s) 410, 1310, 1673
AsuII TTCGAA 1 cut(s) 1606
AvaII GGWCC 1 cut(s) 952
AxyI CCTNAGG 2 cut(s) 368, 1671
BaeI ACNNNNGTAYC 2 cut(s) 1833, 1866
BamHI GGATCC 1 cut(s) 727
BanI GGYRCC 1 cut(s) 1865
BarI GAAGNNNNNNTAC 2 cut(s) 867, 899
BbsI GAAGAC 7 cut(s) 181, 282, 541, 828, 843, 1013, 1473
Bbv12I GWGCWC 1 cut(s) 1669
BbvCI CCTCAGC 1 cut(s) 543
BbvI GCAGC 5 cut(s) 683, 1261, 1448, 1462, 2075
BccI CCATC 8 cut(s) 326, 389, 594, 617, 1358, 1432, 1531, 1829
BciT130I CCWGG 3 cut(s) 231, 434, 969
BciVI GTATCC 1 cut(s) 2182
BclI TGATCA 3 cut(s) 198, 1300, 2028
BcnI CCSGG 1 cut(s) 2226
BcoDI GTCTC 3 cut(s) 410, 634, 1901
BfaI CTAG 1 cut(s) 1625
BfmI CTRYAG 4 cut(s) 1108, 1315, 1440, 2328
BfuAI ACCTGC 1 cut(s) 1210
BfuI GTATCC 1 cut(s) 2182
BisI GCNGC 6 cut(s) 697, 1275, 1437, 1476, 2064, 2276
BlsI GCNGC 6 cut(s) 698, 1276, 1438, 1477, 2065, 2277
Bme1390I CCNGG 4 cut(s) 231, 434, 969, 2226
Bme18I GGWCC 1 cut(s) 952
BmgBI CACGTC 1 cut(s) 1756
BmgT120I GGNCC 2 cut(s) 952, 1114
BmiI GGNNCC 7 cut(s) 520, 568, 729, 953, 1115, 1817, 1867
BmrFI CCNGG 4 cut(s) 231, 434, 969, 2226
BmrI ACTGGG 1 cut(s) 2188
BmsI GCATC 8 cut(s) 238, 353, 499, 1423, 1462, 1625, 2227, 2366
BmuI ACTGGG 1 cut(s) 2188
BpiI GAAGAC 7 cut(s) 181, 282, 541, 828, 843, 1013, 1473
BpmI CTGGAG 2 cut(s) 990, 2314
Bpu10I CCTNAGC 1 cut(s) 543
Bpu14I TTCGAA 1 cut(s) 1606
BpuEI CTTGAG 2 cut(s) 665, 2117
BpuMI CCSGG 1 cut(s) 2226
Bsa29I ATCGAT 1 cut(s) 2380
BsaAI YACGTR 1 cut(s) 678
BsaI GGTCTC 1 cut(s) 410
BsaJI CCNNGG 4 cut(s) 421, 432, 967, 2224
Bsc4I CCNNNNNNNGG 3 cut(s) 185, 777, 2051
Bse1I ACTGG 1 cut(s) 2194
Bse21I CCTNAGG 2 cut(s) 368, 1671
Bse3DI GCAATG 2 cut(s) 592, 597
BseBI CCWGG 3 cut(s) 231, 434, 969
BseCI ATCGAT 1 cut(s) 2380
BseDI CCNNGG 4 cut(s) 421, 432, 967, 2224
BseGI GGATG 6 cut(s) 400, 442, 586, 853, 1640, 1992
BseLI CCNNNNNNNGG 3 cut(s) 185, 777, 2051
BseMI GCAATG 2 cut(s) 592, 597
BseMII CTCAG 4 cut(s) 534, 746, 1662, 1704
BseNI ACTGG 1 cut(s) 2194
BseRI GAGGAG 3 cut(s) 511, 809, 1462
BseXI GCAGC 5 cut(s) 683, 1261, 1448, 1462, 2075
BseYI CCCAGC 1 cut(s) 1205
BshFI GGCC 1 cut(s) 1116
BshNI GGYRCC 1 cut(s) 1865
BshVI ATCGAT 1 cut(s) 2380
BsiHKAI GWGCWC 1 cut(s) 1669
BsiSI CCGG 1 cut(s) 2226
BslFI GGGAC 1 cut(s) 965
BslI CCNNNNNNNGG 3 cut(s) 185, 777, 2051
BsmAI GTCTC 3 cut(s) 410, 634, 1901
BsmBI CGTCTC 1 cut(s) 1901
BsmFI GGGAC 1 cut(s) 965
BsmI GAATGC 2 cut(s) 403, 1750
BsnI GGCC 1 cut(s) 1116
Bso31I GGTCTC 1 cut(s) 410
Bsp119I TTCGAA 1 cut(s) 1606
Bsp1286I GDGCHC 1 cut(s) 1669
Bsp143I GATC 9 cut(s) 198, 658, 727, 1300, 2028, 2178, 2228, 2257, 2377
BspACI CCGC 4 cut(s) 251, 1164, 1277, 2276
BspANI GGCC 1 cut(s) 1116
BspCNI CTCAG 4 cut(s) 535, 745, 1663, 1705
BspDI ATCGAT 1 cut(s) 2380
BspLI GGNNCC 7 cut(s) 520, 568, 729, 953, 1115, 1817, 1867
BspMI ACCTGC 1 cut(s) 1210
BspPI GGATC 4 cut(s) 722, 735, 2236, 2265
BspT104I TTCGAA 1 cut(s) 1606
BspT107I GGYRCC 1 cut(s) 1865
BspTNI GGTCTC 1 cut(s) 410
BsrDI GCAATG 2 cut(s) 592, 597
BsrI ACTGG 1 cut(s) 2194
BssECI CCNNGG 4 cut(s) 421, 432, 967, 2224
BssMI GATC 9 cut(s) 198, 658, 727, 1300, 2028, 2178, 2228, 2257, 2377
BssNAI GTATAC 1 cut(s) 2370
BssT1I CCWWGG 1 cut(s) 421
Bst1107I GTATAC 1 cut(s) 2370
Bst2UI CCWGG 3 cut(s) 231, 434, 969
Bst4CI ACNGT 4 cut(s) 388, 476, 893, 1519
Bst6I CTCTTC 3 cut(s) 164, 1899, 1970
BstAPI GCANNNNNTGC 1 cut(s) 1745
BstBAI YACGTR 1 cut(s) 678
BstBI TTCGAA 1 cut(s) 1606
BstC8I GCNNGC 1 cut(s) 788
BstDEI CTNAG 6 cut(s) 368, 543, 732, 1260, 1671, 1713
BstENI CCTNNNNNAGG 1 cut(s) 775
BstF5I GGATG 6 cut(s) 400, 442, 586, 853, 1640, 1992
BstHHI GCGC 2 cut(s) 1418, 1750
BstKTI GATC 9 cut(s) 201, 661, 730, 1303, 2031, 2181, 2231, 2260, 2380
BstMAI GTCTC 3 cut(s) 410, 634, 1901
BstMBI GATC 9 cut(s) 198, 658, 727, 1300, 2028, 2178, 2228, 2257, 2377
BstMWI GCNNNNNNNGC 4 cut(s) 1664, 1745, 1805, 2069
BstNI CCWGG 3 cut(s) 231, 434, 969
BstSCI CCNGG 4 cut(s) 229, 432, 967, 2224
BstSFI CTRYAG 4 cut(s) 1108, 1315, 1440, 2328
BstV1I GCAGC 5 cut(s) 683, 1261, 1448, 1462, 2075
BstV2I GAAGAC 7 cut(s) 181, 282, 541, 828, 843, 1013, 1473
BstX2I RGATCY 2 cut(s) 727, 2228
BstXI CCANNNNNNTGG 1 cut(s) 2342
BstYI RGATCY 2 cut(s) 727, 2228
BstZ17I GTATAC 1 cut(s) 2370
Bsu15I ATCGAT 1 cut(s) 2380
Bsu36I CCTNAGG 2 cut(s) 368, 1671
BsuI GTATCC 1 cut(s) 2182
BsuRI GGCC 1 cut(s) 1116
BsuTUI ATCGAT 1 cut(s) 2380
BtrI CACGTC 1 cut(s) 1756
BtsCI GGATG 6 cut(s) 400, 442, 586, 853, 1640, 1992
BtsI GCAGTG 3 cut(s) 65, 1645, 2352
BtsIMutI CAGTG 3 cut(s) 65, 1645, 2352
BveI ACCTGC 1 cut(s) 1210
Cac8I GCNNGC 1 cut(s) 788
CaiI CAGNNNCTG 3 cut(s) 542, 1658, 2200
CfoI GCGC 2 cut(s) 1418, 1750
Cfr13I GGNCC 2 cut(s) 952, 1114
ClaI ATCGAT 1 cut(s) 2380
CseI GACGC 2 cut(s) 278, 1467
Csp6I GTAC 2 cut(s) 896, 1825
CviAII CATG 5 cut(s) 917, 1736, 1740, 2032, 2342
CviQI GTAC 2 cut(s) 896, 1825
DdeI CTNAG 6 cut(s) 368, 543, 732, 1260, 1671, 1713
DpnI GATC 9 cut(s) 200, 660, 729, 1302, 2030, 2180, 2230, 2259, 2379
DpnII GATC 9 cut(s) 198, 658, 727, 1300, 2028, 2178, 2228, 2257, 2377
DraI TTTAAA 1 cut(s) 2395
DrdI GACNNNNNNGTC 1 cut(s) 626
DseDI GACNNNNNNGTC 1 cut(s) 626
Eam1104I CTCTTC 3 cut(s) 164, 1899, 1970
EarI CTCTTC 3 cut(s) 164, 1899, 1970
Eco130I CCWWGG 1 cut(s) 421
Eco31I GGTCTC 1 cut(s) 410
Eco32I GATATC 2 cut(s) 1068, 1134
Eco47I GGWCC 1 cut(s) 952
Eco57I CTGAAG 5 cut(s) 294, 519, 657, 1169, 1665
Eco81I CCTNAGG 2 cut(s) 368, 1671
EcoNI CCTNNNNNAGG 1 cut(s) 775
EcoRI GAATTC 1 cut(s) 1103
EcoRII CCWGG 3 cut(s) 229, 432, 967
EcoRV GATATC 2 cut(s) 1068, 1134
EcoT14I CCWWGG 1 cut(s) 421
EcoT22I ATGCAT 1 cut(s) 1741
ErhI CCWWGG 1 cut(s) 421
Esp3I CGTCTC 1 cut(s) 1901
FaeI CATG 5 cut(s) 920, 1739, 1743, 2035, 2345
FalI AAGNNNNNCTT 2 cut(s) 1907, 1939
FaqI GGGAC 1 cut(s) 965
FatI CATG 5 cut(s) 916, 1735, 1739, 2031, 2341
FbaI TGATCA 3 cut(s) 198, 1300, 2028
FblI GTMKAC 1 cut(s) 2369
Fnu4HI GCNGC 6 cut(s) 697, 1275, 1437, 1476, 2064, 2276
FokI GGATG 6 cut(s) 407, 449, 573, 860, 1647, 1999
Fsp4HI GCNGC 6 cut(s) 697, 1275, 1437, 1476, 2064, 2276
FspBI CTAG 1 cut(s) 1625
GlaI GCGC 2 cut(s) 1417, 1749
GluI GCNGC 6 cut(s) 697, 1275, 1437, 1476, 2064, 2276
GsaI CCCAGC 1 cut(s) 1209
GsuI CTGGAG 2 cut(s) 990, 2314
HaeIII GGCC 1 cut(s) 1116
HapII CCGG 1 cut(s) 2226
HgaI GACGC 2 cut(s) 278, 1467
HhaI GCGC 2 cut(s) 1418, 1750
Hin1II CATG 5 cut(s) 920, 1739, 1743, 2035, 2345
Hin6I GCGC 2 cut(s) 1416, 1748
HinP1I GCGC 2 cut(s) 1416, 1748
HincII GTYRAC 1 cut(s) 1410
HindII GTYRAC 1 cut(s) 1410
HindIII AAGCTT 1 cut(s) 1088
HpaII CCGG 1 cut(s) 2226
HphI GGTGA 3 cut(s) 410, 1310, 1673
Hpy166II GTNNAC 7 cut(s) 707, 896, 1410, 1681, 1784, 1852, 2370
Hpy188I TCNGA 6 cut(s) 526, 684, 1045, 1654, 2054, 2387
Hpy8I GTNNAC 7 cut(s) 707, 896, 1410, 1681, 1784, 1852, 2370
Hpy99I CGWCG 1 cut(s) 293
HpyAV CCTTC 9 cut(s) 350, 718, 821, 845, 869, 1061, 1315, 1580, 1625
HpyCH4III ACNGT 4 cut(s) 388, 476, 893, 1519
HpyCH4IV ACGT 2 cut(s) 677, 1755
HpyF10VI GCNNNNNNNGC 4 cut(s) 1664, 1745, 1805, 2069
HpyF3I CTNAG 6 cut(s) 368, 543, 732, 1260, 1671, 1713
HpySE526I ACGT 2 cut(s) 677, 1755
Hsp92II CATG 5 cut(s) 920, 1739, 1743, 2035, 2345
HspAI GCGC 2 cut(s) 1416, 1748
Ksp22I TGATCA 3 cut(s) 198, 1300, 2028
Kzo9I GATC 9 cut(s) 198, 658, 727, 1300, 2028, 2178, 2228, 2257, 2377
LmnI GCTCC 6 cut(s) 524, 1129, 1369, 1672, 1821, 2118
Lsp1109I GCAGC 5 cut(s) 683, 1261, 1448, 1462, 2075
LweI GCATC 8 cut(s) 238, 353, 499, 1423, 1462, 1625, 2227, 2366
MaeI CTAG 1 cut(s) 1625
MaeII ACGT 2 cut(s) 677, 1755
MaeIII GTNAC 3 cut(s) 1072, 2019, 2345
MalI GATC 9 cut(s) 200, 660, 729, 1302, 2030, 2180, 2230, 2259, 2379
MboI GATC 9 cut(s) 198, 658, 727, 1300, 2028, 2178, 2228, 2257, 2377
MfeI CAATTG 3 cut(s) 1593, 2024, 2252
MflI RGATCY 2 cut(s) 727, 2228
MhlI GDGCHC 1 cut(s) 1669
MlyI GAGTC 6 cut(s) 290, 636, 1334, 1522, 2305, 2382
MmeI TCCRAC 1 cut(s) 309
Mph1103I ATGCAT 1 cut(s) 1741
MroXI GAANNNNTTC 3 cut(s) 450, 1050, 1961
MseI TTAA 9 cut(s) 927, 975, 1389, 1463, 1791, 2039, 2058, 2150, 2394
MslI CAYNNNNRTG 2 cut(s) 1571, 1886
MspI CCGG 1 cut(s) 2226
MspR9I CCNGG 4 cut(s) 231, 434, 969, 2226
MunI CAATTG 3 cut(s) 1593, 2024, 2252
Mva1269I GAATGC 2 cut(s) 403, 1750
MvaI CCWGG 3 cut(s) 231, 434, 969
MwoI GCNNNNNNNGC 4 cut(s) 1664, 1745, 1805, 2069
NciI CCSGG 1 cut(s) 2226
NdeII GATC 9 cut(s) 198, 658, 727, 1300, 2028, 2178, 2228, 2257, 2377
NlaIII CATG 5 cut(s) 920, 1739, 1743, 2035, 2345
NlaIV GGNNCC 7 cut(s) 520, 568, 729, 953, 1115, 1817, 1867
NmuCI GTSAC 3 cut(s) 1072, 2019, 2345
NsiI ATGCAT 1 cut(s) 1741
NspV TTCGAA 1 cut(s) 1606
PcsI WCGNNNNNNNCGW 3 cut(s) 276, 285, 387
PctI GAATGC 2 cut(s) 403, 1750
PdmI GAANNNNTTC 3 cut(s) 450, 1050, 1961
PfeI GAWTC 7 cut(s) 308, 451, 668, 685, 1046, 1649, 2382
PkrI GCNGC 6 cut(s) 698, 1276, 1438, 1477, 2065, 2277
PleI GAGTC 6 cut(s) 289, 635, 1333, 1522, 2304, 2382
PpsI GAGTC 6 cut(s) 289, 635, 1333, 1522, 2304, 2382
Ppu21I YACGTR 1 cut(s) 678
PsiI TTATAA 4 cut(s) 483, 615, 1505, 1929
Psp6I CCWGG 3 cut(s) 229, 432, 967
PspFI CCCAGC 1 cut(s) 1205
PspGI CCWGG 3 cut(s) 229, 432, 967
PspN4I GGNNCC 7 cut(s) 520, 568, 729, 953, 1115, 1817, 1867
PspPI GGNCC 2 cut(s) 952, 1114
PstNI CAGNNNCTG 3 cut(s) 542, 1658, 2200
PsuI RGATCY 2 cut(s) 727, 2228
RsaI GTAC 2 cut(s) 897, 1826
RsaNI GTAC 2 cut(s) 896, 1825
RseI CAYNNNNRTG 2 cut(s) 1571, 1886
SaqAI TTAA 9 cut(s) 927, 975, 1389, 1463, 1791, 2039, 2058, 2150, 2394
SatI GCNGC 6 cut(s) 697, 1275, 1437, 1476, 2064, 2276
Sau3AI GATC 9 cut(s) 198, 658, 727, 1300, 2028, 2178, 2228, 2257, 2377
Sau96I GGNCC 2 cut(s) 952, 1114
SchI GAGTC 6 cut(s) 290, 636, 1334, 1522, 2305, 2382
ScrFI CCNGG 4 cut(s) 231, 434, 969, 2226
SduI GDGCHC 1 cut(s) 1669
SfaNI GCATC 8 cut(s) 238, 353, 499, 1423, 1462, 1625, 2227, 2366
SfcI CTRYAG 4 cut(s) 1108, 1315, 1440, 2328
SfuI TTCGAA 1 cut(s) 1606
SinI GGWCC 1 cut(s) 952
SmiMI CAYNNNNRTG 2 cut(s) 1571, 1886
SmlI CTYRAG 2 cut(s) 644, 2096
SmoI CTYRAG 2 cut(s) 644, 2096
SsiI CCGC 4 cut(s) 251, 1164, 1277, 2276
SspI AATATT 1 cut(s) 1386
SspMI CTAG 1 cut(s) 1625
StyD4I CCNGG 4 cut(s) 229, 432, 967, 2224
StyI CCWWGG 1 cut(s) 421
TaaI ACNGT 4 cut(s) 388, 476, 893, 1519
TaiI ACGT 2 cut(s) 680, 1758
TaqI TCGA 4 cut(s) 390, 1526, 1606, 2380
TaqII GACCGA 1 cut(s) 1025
TatI WGTACW 1 cut(s) 895
TauI GCSGC 1 cut(s) 2278
TfiI GAWTC 7 cut(s) 308, 451, 668, 685, 1046, 1649, 2382
Tru1I TTAA 9 cut(s) 927, 975, 1389, 1463, 1791, 2039, 2058, 2150, 2394
Tru9I TTAA 9 cut(s) 927, 975, 1389, 1463, 1791, 2039, 2058, 2150, 2394
TscAI CASTG 3 cut(s) 72, 1645, 2359
TseFI GTSAC 3 cut(s) 1072, 2019, 2345
TseI GCWGC 5 cut(s) 696, 1274, 1436, 1475, 2063
Tsp45I GTSAC 3 cut(s) 1072, 2019, 2345
TspDTI ATGAA 9 cut(s) 453, 677, 864, 1481, 1724, 1904, 2003, 2071, 2169
TspGWI ACGGA 2 cut(s) 1051, 1633
TspRI CASTG 3 cut(s) 72, 1645, 2359
VpaK11BI GGWCC 1 cut(s) 952
XagI CCTNNNNNAGG 1 cut(s) 775
XapI RAATTY 3 cut(s) 458, 962, 1103
XcmI CCANNNNNNNNNTGG 2 cut(s) 1552, 2289
XmiI GTMKAC 1 cut(s) 2369
XmnI GAANNNNTTC 3 cut(s) 450, 1050, 1961
XspI CTAG 1 cut(s) 1625
Zsp2I ATGCAT 1 cut(s) 1741
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.