Rw4G010510

metal ion binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0000343
Physical Location & Seq
Forward (+)
24363794 .. 24376162
12369 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G010510.1

Sequence Viewer

Length: 1974 bp
ATGGAGCCTGCCAACAACAGCCCCGGAATCAGAGAAGAAGGCGAGCTCTCTCCCGACGACGCTGACGACATTCAAGTTACTAAAAGGCTCAAATGTGTGGTTGATGATACGATTGATGATGCTGAAGATGAGTTCATTGACATTGATTATATGTTTGGCTATGTCTGCGCTTTGTGTCATGATGGCGGTGACCTCTTGTGTTGTGAAGGGAGGTGCCTAAGGTCATTTCATGCAACTCCAGAGACTGGTCAGGACTCTAGTTGCGTATCTCTTGGCTTTACAAAGGATGCAGTAGATGCAATGCCTAATTTCTTATGCCAGAACTGCAAATACAAACAACACCAGTGCTTTGTTTGTGGAGAGTTGGGATCTTCAGACAAATCTTCAGGTGCTGCTGAGGTTGTTCCCTGTGTTTCTCCGGTATGTGGTCAATTCTACCATCCACATTGTGTTGCAAAAGAACTTTCTCAAGATAATGGAGTTCCTGCTGAAGAACTTGAGAAAAAGATTACAATGGGAGAATCTTTTACATGTCCAGTTCATAAGTGCCGCGTTTGTAAACAAGGAGAAAATATTGAGGATCACGGTTTACAATTTGCTGTGTGCATGCTCTGTCCCAAGTCATACCACAGGAAATGCCTGCCAAGTTTTATTCCTTTCGAAGACAAAGAAGGAACATGTGGTGAAGGAAAATTAGTAACAAGAGCTTGGGACGGAATAATGCCTAACCGTATACTAATATATTGCATAAAACACGAGGAAGATAAAACAACTAAACTTTTTGTAAGGGACCACATAAAATTTCCTGCTGTTAAAGAGAAGAGGAAACTGACACCACAGTCTATTGTAGACAGAGAGCAAGTTGCGTCTATGATGATAAATCCTTCATTGGAAGAATCATACAGAGAAAGAACTGCAAACACAGAATTCAAACAGAAGGAGAAGCCATCTTTTGCTAGAAAGCGTGGAAATTTGGATGCACCTAATACAGATACAAAAAGGAGAATATTGGGCTTAATGGAAAAGGCTGCATCTTCAATAACCTTGAAAGATATATTAAGGAAGTACCCAGTTCCATCTCATACTTACTCCATGAAAAATGTTGTGGACACGAAAATGTCATTGGGAAAGGTGGAAGTCTCGATTGAGGCCGCTAGAACAGCATTCAGAAAACTAGATGAAGGGTGCAGTACCAAAGATGCAGAAGCTGTTTGTGGGCCTGAGGTTCTTAAACAGATATTTAGATGGAAGACAAAGATGAATGTTTATCTCGGTCCTTTCCTTCATGGCATGCGCTACACATCCTTTGGTCGCCATTTTACGAACGTGGAGAAACTAAAACAGATTGTAGATAAGCTCCATTGGTATGTGAAGGCCGGAGATATGATTGTGGACTTTTGCTGTGGTGCTAATGACTTCAGTGTCATTATGAAAAAAAAACTTGAAGAGACGGGAAAGAATTGCTACTACAAGAACTATGACCTTTTTCAAGCTAAGAATGATTTTAATTTCGAAAAGAAGGACTGGATGACTGTCCAGAGGGAGGAGCTACCCGTGGGATCTCGGTTGATCATGGGGCTGAACCCTCCTTTTGGAGTTAAAGCATCTCGGGCGAACCAGTTCATTGATAAGGCTCTCGGGTTTAATCCAAAGCTCCTAATTCTTATTGTTCCATCAGAAACACAAAGGCTGGATCAGAAGGCATCACCTTATGATCTGATTTGGGAGAATTCTCAGCTTCTATCAGGAAAGTCATTTTATCTACCTGGATCAGTTGATGTGAATGGTAAACATATAGACCAGCATAATGTGATTCCACCTCCTCTCTATCTCTGGAGTCGTCCTGATTGGTCTTCGGAACACTATGCTATAGCTCAAGAGCATGGTCACATTTCTATACCCCAGTCAGCAACGGTTGAGAACAGCAGCACTCATTTTGAAGACCGAATCAGGGTGCACAGAAATGTTGCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006325 GO:0006355 GO:0006950 GO:0006952 GO:0006996 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0009605 GO:0009607 GO:0009620 GO:0009791 GO:0009889 GO:0009893 GO:0009909 GO:0009911 GO:0009987 GO:0010228 GO:0010468 GO:0010556 GO:0010604 GO:0010638 GO:0016043 GO:0019219 GO:0019222 GO:0022414 GO:0023052 GO:0030154 GO:0031056 GO:0031058 GO:0031060 GO:0031062 GO:0031323 GO:0031325 GO:0031326 GO:0031399 GO:0031401 GO:0031440 GO:0031935 GO:0031937 GO:0032268 GO:0032270 GO:0032501 GO:0032502 GO:0033043 GO:0033044 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0043954 GO:0044030 GO:0044424 GO:0044464 GO:0048366 GO:0048367 GO:0048468 GO:0048518 GO:0048522 GO:0048580 GO:0048582 GO:0048608 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0048869 GO:0050684 GO:0050789 GO:0050793 GO:0050794 GO:0050832 GO:0050896 GO:0051052 GO:0051094 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051239 GO:0051240 GO:0051246 GO:0051247 GO:0051252 GO:0051276 GO:0051570 GO:0051574 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0060968 GO:0061085 GO:0061087 GO:0061458 GO:0065007 GO:0070827 GO:0070828 GO:0070829 GO:0071840 GO:0080090 GO:0090436 GO:0097159 GO:0098542 GO:0099402 GO:0140110 GO:1900109 GO:1900111 GO:1900363 GO:1901363 GO:1902275 GO:1903311 GO:1903506 GO:1905269 GO:2000024 GO:2000026 GO:2000112 GO:2000241 GO:2000243 GO:2001141 GO:2001252
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DNMT1-RFD

Protein Analysis

657

Amino Acids

74.39

Weight (kDa)

6.61

Isoelectric Point (pI)

43.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PHD_NSD PF22908 112 - 181 1.7e-18 Histone-lysine N-methyltransferase NSD-like, PHD zinc finger
Mtase_EDM2 PF26055 456 - 626 4.1e-90 EDM2 methyltransferase-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000343)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48090 AT5G48090 AT5G48090 AT5G55390 AT5G55390 AT5G55390
fragaria_vesca FvH4_3g23690 FvH4_4g08730 FvH4_4g08730 FvH4_4g08730 FvH4_4g08730 FvH4_4g08730 FvH4_4g08730 FvH4_5g31160 FvH4_5g31160 FvH4_5g31160 FvH4_5g31160 FvH4_5g31160
malus_domestica MD03G1191000.v1.1 MD11G1207800.v1.1 MD11G1208000.v1.1
prunus_persica Prupe.4G227500_v2.0.a1 Prupe.4G227500_v2.0.a1 Prupe.4G227500_v2.0.a1 Prupe.4G227500_v2.0.a1 Prupe.4G227500_v2.0.a1 Prupe.4G227500_v2.0.a1 Prupe.4G227600_v2.0.a1 Prupe.4G227700_v2.0.a1 Prupe.4G227800_v2.0.a1 Prupe.4G227800_v2.0.a1 Prupe.4G227800_v2.0.a1 Prupe.4G227800_v2.0.a1 Prupe.4G227800_v2.0.a1
pyrus_communis pycom01g03400 pycom03g14420 pycom11g18100 pycom11g18140 pycom11g18150 pycom11g18160
rosa_chinensis RchiOBHm_Chr2g0145981 RchiOBHm_Chr4g0405241 RchiOBHm_Chr4g0405271 RchiOBHm_Chr5g0016201 RchiOBHm_Chr5g0041831 RchiOBHm_Chr5g0041871 RchiOBHm_Chr5g0041881 RchiOBHm_Chr5g0059241
rosa_laevigata RLG00000002117 RLG00000008861 RLG00000008862 RLG00000011000 RLG00000033216 RLG00000034097 RLG00000034101
rosa_multiflora Rmu_sc0000161.1_g000001 Rmu_sc0000861.1_g000040 Rmu_sc0007522.1_g000003 Rmu_sc0009443.1_g000015 Rmu_sc0022129.1_g000001 Rmu_sc0042315.1_g000001
rosa_roxburghii Rroxscaffold_1G00038660 Rroxscaffold_1G00038690 Rroxscaffold_5G00349560 Rroxscaffold_5G00349610 Rroxscaffold_6G00388370 Rroxscaffold_7G00188740
rosa_rugosa Rorug03G0199700 Rorug04G0055400 Rorug04G0055500 Rorug04G0055900 Rorug04G0056000 Rorug04G0056100 Rorug04G0056100 Rorug04G0056200 Rorug05G0195600 Rorug05G0195700 Rorug05G0195800 Rorug05G0195900 Rorug05G0196800 Rorug05G0385000
rosa_samantha Rh4AG129900 Rh4AG130100 Rh4BG124200 Rh4BG124400 Rh4BG124500 Rh4CG137200 Rh4CG137300 Rh4DG123500 Rh4DG123700 Rh5AG280800 Rh5AG281400 Rh5BG286700 Rh5BG287000 Rh5BG397800 Rh5CG318100 Rh5CG318600 Rh5CG421600 Rh5DG132300 Rh5DG132400 Rh5DG295400 Rh5DG295700 Rh7BG475300
rosa_wichuraiana Rw0G001330 Rw0G005730 Rw4G008670 Rw4G010510 Rw4G010540 Rw5G026450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 838, 1421
AccB1I GGYRCC 1 cut(s) 213
AccB7I CCANNNNNTGG 1 cut(s) 245
AccI GTMKAC 2 cut(s) 733, 849
AccII CGCG 1 cut(s) 552
AciI CCGC 3 cut(s) 186, 550, 1152
AclWI GGATC 5 cut(s) 376, 588, 1567, 1701, 1777
AcsI RAATTY 4 cut(s) 800, 926, 970, 1729
AcuI CTGAAG 5 cut(s) 144, 357, 369, 510, 1402
AdeI CACNNNGTG 1 cut(s) 449
AfaI GTAC 2 cut(s) 1067, 1192
AfiI CCNNNNNNNGG 5 cut(s) 245, 425, 1543, 1592, 1951
AflIII ACRYGT 2 cut(s) 530, 677
AgsI TTSAA 7 cut(s) 74, 931, 1038, 1048, 1445, 1490, 1940
AjnI CCWGG 1 cut(s) 1765
AjuI GAANNNNNNNTTGG 2 cut(s) 1106, 1138
AluBI AGCT 9 cut(s) 46, 707, 1208, 1357, 1493, 1549, 1654, 1738, 1874
AluI AGCT 9 cut(s) 46, 707, 1208, 1357, 1493, 1549, 1654, 1738, 1874
Alw21I GWGCWC 2 cut(s) 48, 1959
Alw26I GTCTC 3 cut(s) 236, 1144, 1442
Alw44I GTGCAC 1 cut(s) 1955
AlwI GGATC 5 cut(s) 376, 588, 1567, 1701, 1777
AlwNI CAGNNNCTG 3 cut(s) 245, 392, 1208
Ama87I CYCGRG 2 cut(s) 1608, 1637
AoxI GGCC 3 cut(s) 1149, 1217, 1374
ApaLI GTGCAC 1 cut(s) 1955
ApeKI GCWGC 3 cut(s) 392, 1028, 1926
ApoI RAATTY 4 cut(s) 800, 926, 970, 1729
Asp700I GAANNNNTTC 1 cut(s) 1619
AspLEI GCGC 2 cut(s) 170, 1296
AspS9I GGNCC 3 cut(s) 790, 1217, 1274
AsuC2I CCSGG 1 cut(s) 24
AsuHPI GGTGA 3 cut(s) 200, 695, 1698
AsuII TTCGAA 2 cut(s) 660, 1512
AvaI CYCGRG 2 cut(s) 1608, 1637
AvaII GGWCC 2 cut(s) 790, 1274
AxyI CCTNAGG 2 cut(s) 218, 1221
BaeGI GKGCMC 1 cut(s) 1959
BanI GGYRCC 1 cut(s) 213
BanII GRGCYC 1 cut(s) 48
BauI CACGAG 1 cut(s) 755
BbsI GAAGAC 4 cut(s) 669, 1256, 1845, 1947
Bbv12I GWGCWC 2 cut(s) 48, 1959
BbvCI CCTCAGC 1 cut(s) 396
BbvI GCAGC 3 cut(s) 379, 1015, 1938
BccI CCATC 6 cut(s) 176, 447, 955, 1084, 1239, 1681
BciT130I CCWGG 1 cut(s) 1767
BclI TGATCA 1 cut(s) 1569
BcnI CCSGG 1 cut(s) 24
BcoDI GTCTC 3 cut(s) 236, 1144, 1442
BfaI CTAG 4 cut(s) 258, 957, 1155, 1175
BfmI CTRYAG 1 cut(s) 1869
BisI GCNGC 5 cut(s) 393, 550, 1029, 1152, 1927
BlsI GCNGC 5 cut(s) 394, 551, 1030, 1153, 1928
Bme1390I CCNGG 2 cut(s) 24, 1767
Bme18I GGWCC 2 cut(s) 790, 1274
BmeT110I CYCGRG 2 cut(s) 1608, 1637
BmgT120I GGNCC 3 cut(s) 790, 1217, 1274
BmiI GGNNCC 3 cut(s) 6, 215, 791
BmrFI CCNGG 2 cut(s) 24, 1767
BmrI ACTGGG 2 cut(s) 1064, 1897
BmsI GCATC 8 cut(s) 109, 277, 286, 967, 1040, 1189, 1613, 1712
BmuI ACTGGG 2 cut(s) 1064, 1897
BpiI GAAGAC 4 cut(s) 669, 1256, 1845, 1947
BpmI CTGGAG 2 cut(s) 222, 1855
Bpu10I CCTNAGC 1 cut(s) 396
Bpu14I TTCGAA 2 cut(s) 660, 1512
BpuEI CTTGAG 3 cut(s) 453, 518, 1860
BpuMI CCSGG 1 cut(s) 24
BsaJI CCNNGG 2 cut(s) 22, 1554
BsaWI WCCGGW 1 cut(s) 418
Bsc4I CCNNNNNNNGG 5 cut(s) 245, 425, 1543, 1592, 1951
Bse1I ACTGG 7 cut(s) 250, 343, 536, 1070, 1529, 1618, 1903
Bse21I CCTNAGG 2 cut(s) 218, 1221
Bse3DI GCAATG 1 cut(s) 306
BseBI CCWGG 1 cut(s) 1767
BseDI CCNNGG 2 cut(s) 22, 1554
BseGI GGATG 5 cut(s) 292, 439, 982, 1301, 1533
BseLI CCNNNNNNNGG 5 cut(s) 245, 425, 1543, 1592, 1951
BseMI GCAATG 1 cut(s) 306
BseMII CTCAG 3 cut(s) 387, 1212, 1748
BseNI ACTGG 7 cut(s) 250, 343, 536, 1070, 1529, 1618, 1903
BseRI GAGGAG 2 cut(s) 1559, 1812
BseSI GKGCMC 1 cut(s) 1959
BseXI GCAGC 3 cut(s) 379, 1015, 1938
BsgI GTGCAG 1 cut(s) 1207
Bsh1236I CGCG 1 cut(s) 552
BshFI GGCC 3 cut(s) 1151, 1219, 1376
BshNI GGYRCC 1 cut(s) 213
BsiHKAI GWGCWC 2 cut(s) 48, 1959
BsiHKCI CYCGRG 2 cut(s) 1608, 1637
BsiSI CCGG 3 cut(s) 24, 419, 1377
BslFI GGGAC 3 cut(s) 600, 725, 803
BslI CCNNNNNNNGG 5 cut(s) 245, 425, 1543, 1592, 1951
BsmAI GTCTC 3 cut(s) 236, 1144, 1442
BsmBI CGTCTC 1 cut(s) 1442
BsmFI GGGAC 3 cut(s) 600, 725, 803
BsmI GAATGC 1 cut(s) 1163
BsnI GGCC 3 cut(s) 1151, 1219, 1376
BsoBI CYCGRG 2 cut(s) 1608, 1637
Bsp119I TTCGAA 2 cut(s) 660, 1512
Bsp1286I GDGCHC 2 cut(s) 48, 1959
Bsp143I GATC 7 cut(s) 368, 580, 1559, 1569, 1693, 1714, 1769
BspACI CCGC 3 cut(s) 186, 550, 1152
BspANI GGCC 3 cut(s) 1151, 1219, 1376
BspCNI CTCAG 3 cut(s) 388, 1213, 1747
BspFNI CGCG 1 cut(s) 552
BspHI TCATGA 1 cut(s) 178
BspLI GGNNCC 3 cut(s) 6, 215, 791
BspPI GGATC 5 cut(s) 376, 588, 1567, 1701, 1777
BspT104I TTCGAA 2 cut(s) 660, 1512
BspT107I GGYRCC 1 cut(s) 213
BsrDI GCAATG 1 cut(s) 306
BsrI ACTGG 7 cut(s) 250, 343, 536, 1070, 1529, 1618, 1903
BssECI CCNNGG 2 cut(s) 22, 1554
BssMI GATC 7 cut(s) 368, 580, 1559, 1569, 1693, 1714, 1769
BssNAI GTATAC 1 cut(s) 734
BssSI CACGAG 1 cut(s) 755
Bst1107I GTATAC 1 cut(s) 734
Bst2BI CACGAG 1 cut(s) 755
Bst2UI CCWGG 1 cut(s) 1767
Bst4CI ACNGT 5 cut(s) 587, 731, 840, 1534, 1915
Bst6I CTCTTC 2 cut(s) 815, 1440
BstAPI GCANNNNNTGC 1 cut(s) 296
BstBI TTCGAA 2 cut(s) 660, 1512
BstC8I GCNNGC 5 cut(s) 9, 44, 608, 641, 1292
BstDEI CTNAG 5 cut(s) 218, 396, 1221, 1494, 1734
BstDSI CCRYGG 1 cut(s) 1554
BstEII GGTNACC 1 cut(s) 188
BstF5I GGATG 5 cut(s) 292, 439, 982, 1301, 1533
BstFNI CGCG 1 cut(s) 552
BstHHI GCGC 2 cut(s) 170, 1296
BstKTI GATC 7 cut(s) 371, 583, 1562, 1572, 1696, 1717, 1772
BstMAI GTCTC 3 cut(s) 236, 1144, 1442
BstMBI GATC 7 cut(s) 368, 580, 1559, 1569, 1693, 1714, 1769
BstMWI GCNNNNNNNGC 5 cut(s) 165, 296, 324, 1160, 1610
BstNI CCWGG 1 cut(s) 1767
BstNSI RCATGY 4 cut(s) 534, 610, 681, 1294
BstPI GGTNACC 1 cut(s) 188
BstSCI CCNGG 2 cut(s) 22, 1765
BstSFI CTRYAG 1 cut(s) 1869
BstSLI GKGCMC 1 cut(s) 1959
BstUI CGCG 1 cut(s) 552
BstV1I GCAGC 3 cut(s) 379, 1015, 1938
BstV2I GAAGAC 4 cut(s) 669, 1256, 1845, 1947
BstX2I RGATCY 2 cut(s) 368, 1559
BstYI RGATCY 2 cut(s) 368, 1559
BstZ17I GTATAC 1 cut(s) 734
Bsu36I CCTNAGG 2 cut(s) 218, 1221
BsuRI GGCC 3 cut(s) 1151, 1219, 1376
BtgI CCRYGG 1 cut(s) 1554
BtsCI GGATG 5 cut(s) 292, 439, 982, 1301, 1533
BtsIMutI CAGTG 2 cut(s) 350, 1426
Cac8I GCNNGC 5 cut(s) 9, 44, 608, 641, 1292
CaiI CAGNNNCTG 3 cut(s) 245, 392, 1208
CciI TCATGA 1 cut(s) 178
CfoI GCGC 2 cut(s) 170, 1296
Cfr13I GGNCC 3 cut(s) 790, 1217, 1274
CseI GACGC 2 cut(s) 68, 855
Csp6I GTAC 2 cut(s) 1066, 1191
CviQI GTAC 2 cut(s) 1066, 1191
DdeI CTNAG 5 cut(s) 218, 396, 1221, 1494, 1734
DpnI GATC 7 cut(s) 370, 582, 1561, 1571, 1695, 1716, 1771
DpnII GATC 7 cut(s) 368, 580, 1559, 1569, 1693, 1714, 1769
DraIII CACNNNGTG 1 cut(s) 449
DrdI GACNNNNNNGTC 2 cut(s) 838, 1421
DseDI GACNNNNNNGTC 2 cut(s) 838, 1421
Eam1104I CTCTTC 2 cut(s) 815, 1440
EarI CTCTTC 2 cut(s) 815, 1440
Ecl136II GAGCTC 1 cut(s) 46
Eco24I GRGCYC 1 cut(s) 48
Eco47I GGWCC 2 cut(s) 790, 1274
Eco53kI GAGCTC 1 cut(s) 46
Eco57I CTGAAG 5 cut(s) 144, 357, 369, 510, 1402
Eco81I CCTNAGG 2 cut(s) 218, 1221
Eco88I CYCGRG 2 cut(s) 1608, 1637
Eco91I GGTNACC 1 cut(s) 188
EcoICRI GAGCTC 1 cut(s) 46
EcoO65I GGTNACC 1 cut(s) 188
EcoRI GAATTC 2 cut(s) 926, 1729
EcoRII CCWGG 1 cut(s) 1765
EcoT38I GRGCYC 1 cut(s) 48
Esp3I CGTCTC 1 cut(s) 1442
FaqI GGGAC 3 cut(s) 600, 725, 803
FbaI TGATCA 1 cut(s) 1569
FblI GTMKAC 2 cut(s) 733, 849
Fnu4HI GCNGC 5 cut(s) 393, 550, 1029, 1152, 1927
FokI GGATG 5 cut(s) 299, 426, 989, 1288, 1540
FriOI GRGCYC 1 cut(s) 48
Fsp4HI GCNGC 5 cut(s) 393, 550, 1029, 1152, 1927
FspBI CTAG 4 cut(s) 258, 957, 1155, 1175
GlaI GCGC 2 cut(s) 169, 1295
GluI GCNGC 5 cut(s) 393, 550, 1029, 1152, 1927
GsuI CTGGAG 2 cut(s) 222, 1855
HaeIII GGCC 3 cut(s) 1151, 1219, 1376
HapII CCGG 3 cut(s) 24, 419, 1377
HgaI GACGC 2 cut(s) 68, 855
HhaI GCGC 2 cut(s) 170, 1296
Hin6I GCGC 2 cut(s) 168, 1294
HinP1I GCGC 2 cut(s) 168, 1294
HinfI GANTC 7 cut(s) 27, 254, 521, 896, 1813, 1837, 1947
HpaII CCGG 3 cut(s) 24, 419, 1377
HphI GGTGA 3 cut(s) 200, 695, 1698
Hpy166II GTNNAC 8 cut(s) 560, 590, 734, 850, 1108, 1393, 1790, 1957
Hpy188I TCNGA 7 cut(s) 32, 376, 1169, 1678, 1698, 1719, 1858
Hpy8I GTNNAC 8 cut(s) 560, 590, 734, 850, 1108, 1393, 1790, 1957
Hpy99I CGWCG 2 cut(s) 59, 62
HpyCH4III ACNGT 5 cut(s) 587, 731, 840, 1534, 1915
HpyCH4IV ACGT 1 cut(s) 1326
HpyF10VI GCNNNNNNNGC 5 cut(s) 165, 296, 324, 1160, 1610
HpyF3I CTNAG 5 cut(s) 218, 396, 1221, 1494, 1734
HpySE526I ACGT 1 cut(s) 1326
HspAI GCGC 2 cut(s) 168, 1294
Ksp22I TGATCA 1 cut(s) 1569
Kzo9I GATC 7 cut(s) 368, 580, 1559, 1569, 1693, 1714, 1769
LmnI GCTCC 4 cut(s) 4, 1362, 1546, 1659
Lsp1109I GCAGC 3 cut(s) 379, 1015, 1938
LweI GCATC 8 cut(s) 109, 277, 286, 967, 1040, 1189, 1613, 1712
MaeI CTAG 4 cut(s) 258, 957, 1155, 1175
MaeII ACGT 1 cut(s) 1326
MaeIII GTNAC 4 cut(s) 76, 188, 697, 1886
MalI GATC 7 cut(s) 370, 582, 1561, 1571, 1695, 1716, 1771
MboI GATC 7 cut(s) 368, 580, 1559, 1569, 1693, 1714, 1769
MflI RGATCY 2 cut(s) 368, 1559
MhlI GDGCHC 2 cut(s) 48, 1959
MlyI GAGTC 2 cut(s) 248, 1846
MroXI GAANNNNTTC 1 cut(s) 1619
MseI TTAA 7 cut(s) 813, 1016, 1058, 1230, 1506, 1599, 1644
MslI CAYNNNNRTG 3 cut(s) 1115, 1365, 1962
MspI CCGG 3 cut(s) 24, 419, 1377
MspR9I CCNGG 2 cut(s) 24, 1767
Mva1269I GAATGC 1 cut(s) 1163
MvaI CCWGG 1 cut(s) 1767
MvnI CGCG 1 cut(s) 552
MwoI GCNNNNNNNGC 5 cut(s) 165, 296, 324, 1160, 1610
NciI CCSGG 1 cut(s) 24
NdeII GATC 7 cut(s) 368, 580, 1559, 1569, 1693, 1714, 1769
NlaIV GGNNCC 3 cut(s) 6, 215, 791
NmuCI GTSAC 2 cut(s) 188, 1886
NspI RCATGY 4 cut(s) 534, 610, 681, 1294
NspV TTCGAA 2 cut(s) 660, 1512
PaeI GCATGC 2 cut(s) 610, 1294
PagI TCATGA 1 cut(s) 178
PciI ACATGT 2 cut(s) 530, 677
PcsI WCGNNNNNNNCGW 1 cut(s) 63
PctI GAATGC 1 cut(s) 1163
PdmI GAANNNNTTC 1 cut(s) 1619
PfeI GAWTC 5 cut(s) 27, 521, 896, 1813, 1947
PflMI CCANNNNNTGG 1 cut(s) 245
PkrI GCNGC 5 cut(s) 394, 551, 1030, 1153, 1928
PleI GAGTC 2 cut(s) 248, 1845
PpsI GAGTC 2 cut(s) 248, 1845
PscI ACATGT 2 cut(s) 530, 677
Psp124BI GAGCTC 1 cut(s) 48
Psp6I CCWGG 1 cut(s) 1765
PspEI GGTNACC 1 cut(s) 188
PspGI CCWGG 1 cut(s) 1765
PspN4I GGNNCC 3 cut(s) 6, 215, 791
PspPI GGNCC 3 cut(s) 790, 1217, 1274
PsrI GAACNNNNNNTAC 2 cut(s) 314, 346
PstNI CAGNNNCTG 3 cut(s) 245, 392, 1208
PsuI RGATCY 2 cut(s) 368, 1559
RsaI GTAC 2 cut(s) 1067, 1192
RsaNI GTAC 2 cut(s) 1066, 1191
RseI CAYNNNNRTG 3 cut(s) 1115, 1365, 1962
SacI GAGCTC 1 cut(s) 48
SaqAI TTAA 7 cut(s) 813, 1016, 1058, 1230, 1506, 1599, 1644
SatI GCNGC 5 cut(s) 393, 550, 1029, 1152, 1927
Sau3AI GATC 7 cut(s) 368, 580, 1559, 1569, 1693, 1714, 1769
Sau96I GGNCC 3 cut(s) 790, 1217, 1274
SchI GAGTC 2 cut(s) 248, 1846
ScrFI CCNGG 2 cut(s) 24, 1767
SduI GDGCHC 2 cut(s) 48, 1959
SfaNI GCATC 8 cut(s) 109, 277, 286, 967, 1040, 1189, 1613, 1712
SfcI CTRYAG 1 cut(s) 1869
SfuI TTCGAA 2 cut(s) 660, 1512
SinI GGWCC 2 cut(s) 790, 1274
SmiMI CAYNNNNRTG 3 cut(s) 1115, 1365, 1962
SmlI CTYRAG 3 cut(s) 468, 497, 1875
SmoI CTYRAG 3 cut(s) 468, 497, 1875
SphI GCATGC 2 cut(s) 610, 1294
SsiI CCGC 3 cut(s) 186, 550, 1152
SspI AATATT 2 cut(s) 574, 1008
SspMI CTAG 4 cut(s) 258, 957, 1155, 1175
SstI GAGCTC 1 cut(s) 48
StyD4I CCNGG 2 cut(s) 22, 1765
TaaI ACNGT 5 cut(s) 587, 731, 840, 1534, 1915
TaiI ACGT 1 cut(s) 1329
TaqI TCGA 3 cut(s) 660, 1142, 1512
TaqII GACCGA 2 cut(s) 1262, 1959
TauI GCSGC 2 cut(s) 552, 1154
TfiI GAWTC 5 cut(s) 27, 521, 896, 1813, 1947
Tru1I TTAA 7 cut(s) 813, 1016, 1058, 1230, 1506, 1599, 1644
Tru9I TTAA 7 cut(s) 813, 1016, 1058, 1230, 1506, 1599, 1644
TscAI CASTG 2 cut(s) 350, 1426
TseFI GTSAC 2 cut(s) 188, 1886
TseI GCWGC 3 cut(s) 392, 1028, 1926
Tsp45I GTSAC 2 cut(s) 188, 1886
TspGWI ACGGA 1 cut(s) 729
TspRI CASTG 2 cut(s) 350, 1426
Van91I CCANNNNNTGG 1 cut(s) 245
VneI GTGCAC 1 cut(s) 1955
VpaK11BI GGWCC 2 cut(s) 790, 1274
XapI RAATTY 4 cut(s) 800, 926, 970, 1729
XceI RCATGY 4 cut(s) 534, 610, 681, 1294
XmiI GTMKAC 2 cut(s) 733, 849
XmnI GAANNNNTTC 1 cut(s) 1619
XspI CTAG 4 cut(s) 258, 957, 1155, 1175
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.