UPF0481 protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 485, 1022, 1137 |
| Acc36I | ACCTGC | 1 cut(s) | 207 |
| AccB1I | GGYRCC | 2 cut(s) | 427, 1149 |
| AccI | GTMKAC | 1 cut(s) | 707 |
| AccII | CGCG | 1 cut(s) | 1176 |
| AciI | CCGC | 2 cut(s) | 409, 854 |
| AclI | AACGTT | 1 cut(s) | 725 |
| AclWI | GGATC | 2 cut(s) | 440, 1222 |
| AcsI | RAATTY | 3 cut(s) | 157, 359, 849 |
| AcuI | CTGAAG | 2 cut(s) | 246, 874 |
| AfaI | GTAC | 2 cut(s) | 281, 996 |
| AflIII | ACRYGT | 1 cut(s) | 459 |
| AgsI | TTSAA | 3 cut(s) | 168, 730, 1186 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 565, 597 |
| Alw21I | GWGCWC | 1 cut(s) | 294 |
| Alw26I | GTCTC | 2 cut(s) | 260, 888 |
| AlwI | GGATC | 2 cut(s) | 440, 1222 |
| Ama87I | CYCGRG | 1 cut(s) | 1087 |
| AoxI | GGCC | 1 cut(s) | 173 |
| ApeKI | GCWGC | 3 cut(s) | 76, 1214, 1217 |
| ApoI | RAATTY | 3 cut(s) | 157, 359, 849 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 812, 844 |
| AseI | ATTAAT | 1 cut(s) | 41 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 747 |
| AspA2I | CCTAGG | 1 cut(s) | 1231 |
| AspLEI | GCGC | 1 cut(s) | 481 |
| AspS9I | GGNCC | 1 cut(s) | 173 |
| AsuC2I | CCSGG | 2 cut(s) | 1088, 1089 |
| AsuHPI | GGTGA | 4 cut(s) | 173, 344, 818, 1105 |
| AsuII | TTCGAA | 1 cut(s) | 796 |
| AvaI | CYCGRG | 1 cut(s) | 1087 |
| AvrII | CCTAGG | 1 cut(s) | 1231 |
| BanI | GGYRCC | 2 cut(s) | 427, 1149 |
| BanII | GRGCYC | 1 cut(s) | 294 |
| BbsI | GAAGAC | 1 cut(s) | 627 |
| Bbv12I | GWGCWC | 1 cut(s) | 294 |
| BbvI | GCAGC | 3 cut(s) | 88, 1201, 1204 |
| BccI | CCATC | 6 cut(s) | 367, 377, 760, 838, 1091, 1149 |
| BcnI | CCSGG | 2 cut(s) | 1088, 1089 |
| BcoDI | GTCTC | 2 cut(s) | 260, 888 |
| BfaI | CTAG | 5 cut(s) | 432, 984, 1065, 1232, 1279 |
| BfuAI | ACCTGC | 1 cut(s) | 207 |
| BisI | GCNGC | 3 cut(s) | 77, 1215, 1218 |
| BlnI | CCTAGG | 1 cut(s) | 1231 |
| BlsI | GCNGC | 3 cut(s) | 78, 1216, 1219 |
| Bme1390I | CCNGG | 2 cut(s) | 1088, 1089 |
| BmeT110I | CYCGRG | 1 cut(s) | 1087 |
| BmgT120I | GGNCC | 1 cut(s) | 173 |
| BmiI | GGNNCC | 4 cut(s) | 197, 429, 744, 1151 |
| BmrFI | CCNGG | 2 cut(s) | 1088, 1089 |
| BmrI | ACTGGG | 1 cut(s) | 748 |
| BmsI | GCATC | 5 cut(s) | 56, 111, 459, 687, 936 |
| BmuI | ACTGGG | 1 cut(s) | 748 |
| BpiI | GAAGAC | 1 cut(s) | 627 |
| BpmI | CTGGAG | 2 cut(s) | 296, 798 |
| Bpu14I | TTCGAA | 1 cut(s) | 796 |
| BpuEI | CTTGAG | 3 cut(s) | 34, 551, 1054 |
| BpuMI | CCSGG | 2 cut(s) | 1088, 1089 |
| BsaJI | CCNNGG | 5 cut(s) | 184, 518, 1087, 1193, 1231 |
| Bse1I | ACTGG | 4 cut(s) | 449, 743, 808, 857 |
| Bse3DI | GCAATG | 3 cut(s) | 83, 235, 920 |
| BseDI | CCNNGG | 5 cut(s) | 184, 518, 1087, 1193, 1231 |
| BseGI | GGATG | 4 cut(s) | 47, 448, 474, 1083 |
| BseMI | GCAATG | 3 cut(s) | 83, 235, 920 |
| BseMII | CTCAG | 1 cut(s) | 1183 |
| BseNI | ACTGG | 4 cut(s) | 449, 743, 808, 857 |
| BseXI | GCAGC | 3 cut(s) | 88, 1201, 1204 |
| BsgI | GTGCAG | 1 cut(s) | 1203 |
| Bsh1236I | CGCG | 1 cut(s) | 1176 |
| BshFI | GGCC | 1 cut(s) | 175 |
| BshNI | GGYRCC | 2 cut(s) | 427, 1149 |
| BsiHKAI | GWGCWC | 1 cut(s) | 294 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1087 |
| BsiSI | CCGG | 1 cut(s) | 1088 |
| BsmAI | GTCTC | 2 cut(s) | 260, 888 |
| BsmBI | CGTCTC | 1 cut(s) | 260 |
| BsmI | GAATGC | 1 cut(s) | 1132 |
| BsnI | GGCC | 1 cut(s) | 175 |
| BsoBI | CYCGRG | 1 cut(s) | 1087 |
| Bsp119I | TTCGAA | 1 cut(s) | 796 |
| Bsp1286I | GDGCHC | 1 cut(s) | 294 |
| Bsp1407I | TGTACA | 1 cut(s) | 994 |
| Bsp143I | GATC | 3 cut(s) | 445, 1141, 1227 |
| Bsp19I | CCATGG | 2 cut(s) | 184, 1193 |
| BspACI | CCGC | 2 cut(s) | 409, 854 |
| BspANI | GGCC | 1 cut(s) | 175 |
| BspCNI | CTCAG | 1 cut(s) | 1182 |
| BspFNI | CGCG | 1 cut(s) | 1176 |
| BspHI | TCATGA | 1 cut(s) | 1224 |
| BspLI | GGNNCC | 4 cut(s) | 197, 429, 744, 1151 |
| BspMI | ACCTGC | 1 cut(s) | 207 |
| BspPI | GGATC | 2 cut(s) | 440, 1222 |
| BspT104I | TTCGAA | 1 cut(s) | 796 |
| BspT107I | GGYRCC | 2 cut(s) | 427, 1149 |
| BsrDI | GCAATG | 3 cut(s) | 83, 235, 920 |
| BsrGI | TGTACA | 1 cut(s) | 994 |
| BsrI | ACTGG | 4 cut(s) | 449, 743, 808, 857 |
| BssECI | CCNNGG | 5 cut(s) | 184, 518, 1087, 1193, 1231 |
| BssMI | GATC | 3 cut(s) | 445, 1141, 1227 |
| BssNAI | GTATAC | 1 cut(s) | 708 |
| BssT1I | CCWWGG | 4 cut(s) | 184, 518, 1193, 1231 |
| Bst1107I | GTATAC | 1 cut(s) | 708 |
| Bst4CI | ACNGT | 6 cut(s) | 315, 332, 633, 714, 720, 1030 |
| Bst6I | CTCTTC | 2 cut(s) | 207, 893 |
| BstAUI | TGTACA | 1 cut(s) | 994 |
| BstBI | TTCGAA | 1 cut(s) | 796 |
| BstC8I | GCNNGC | 4 cut(s) | 90, 131, 597, 1148 |
| BstDEI | CTNAG | 1 cut(s) | 1169 |
| BstDSI | CCRYGG | 2 cut(s) | 184, 1193 |
| BstF5I | GGATG | 4 cut(s) | 47, 448, 474, 1083 |
| BstFNI | CGCG | 1 cut(s) | 1176 |
| BstHHI | GCGC | 1 cut(s) | 481 |
| BstKTI | GATC | 3 cut(s) | 448, 1144, 1230 |
| BstMAI | GTCTC | 2 cut(s) | 260, 888 |
| BstMBI | GATC | 3 cut(s) | 445, 1141, 1227 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 73, 85, 130, 478, 924, 1156 |
| BstNSI | RCATGY | 1 cut(s) | 817 |
| BstSCI | CCNGG | 2 cut(s) | 1086, 1087 |
| BstUI | CGCG | 1 cut(s) | 1176 |
| BstV1I | GCAGC | 3 cut(s) | 88, 1201, 1204 |
| BstV2I | GAAGAC | 1 cut(s) | 627 |
| BstZ17I | GTATAC | 1 cut(s) | 708 |
| BsuRI | GGCC | 1 cut(s) | 175 |
| BtgI | CCRYGG | 2 cut(s) | 184, 1193 |
| BtgZI | GCGATG | 1 cut(s) | 886 |
| BtsCI | GGATG | 4 cut(s) | 47, 448, 474, 1083 |
| BtsI | GCAGTG | 2 cut(s) | 358, 474 |
| BtsIMutI | CAGTG | 5 cut(s) | 320, 358, 456, 474, 801 |
| BveI | ACCTGC | 1 cut(s) | 207 |
| Cac8I | GCNNGC | 4 cut(s) | 90, 131, 597, 1148 |
| CciI | TCATGA | 1 cut(s) | 1224 |
| CfoI | GCGC | 1 cut(s) | 481 |
| Cfr13I | GGNCC | 1 cut(s) | 173 |
| Cfr9I | CCCGGG | 1 cut(s) | 1087 |
| CseI | GACGC | 1 cut(s) | 1182 |
| Csp6I | GTAC | 2 cut(s) | 280, 995 |
| CviAII | CATG | 6 cut(s) | 29, 185, 208, 814, 1194, 1225 |
| CviQI | GTAC | 2 cut(s) | 280, 995 |
| DdeI | CTNAG | 1 cut(s) | 1169 |
| DpnI | GATC | 3 cut(s) | 447, 1143, 1229 |
| DpnII | GATC | 3 cut(s) | 445, 1141, 1227 |
| Eam1104I | CTCTTC | 2 cut(s) | 207, 893 |
| EarI | CTCTTC | 2 cut(s) | 207, 893 |
| EciI | GGCGGA | 1 cut(s) | 843 |
| Ecl136II | GAGCTC | 1 cut(s) | 292 |
| Eco130I | CCWWGG | 4 cut(s) | 184, 518, 1193, 1231 |
| Eco24I | GRGCYC | 1 cut(s) | 294 |
| Eco53kI | GAGCTC | 1 cut(s) | 292 |
| Eco57I | CTGAAG | 2 cut(s) | 246, 874 |
| Eco88I | CYCGRG | 1 cut(s) | 1087 |
| EcoICRI | GAGCTC | 1 cut(s) | 292 |
| EcoT14I | CCWWGG | 4 cut(s) | 184, 518, 1193, 1231 |
| EcoT38I | GRGCYC | 1 cut(s) | 294 |
| ErhI | CCWWGG | 4 cut(s) | 184, 518, 1193, 1231 |
| Esp3I | CGTCTC | 1 cut(s) | 260 |
| FaeI | CATG | 6 cut(s) | 32, 188, 211, 817, 1197, 1228 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 135, 167, 676, 708 |
| FatI | CATG | 6 cut(s) | 28, 184, 207, 813, 1193, 1224 |
| FauNDI | CATATG | 1 cut(s) | 907 |
| FblI | GTMKAC | 1 cut(s) | 707 |
| Fnu4HI | GCNGC | 3 cut(s) | 77, 1215, 1218 |
| FokI | GGATG | 4 cut(s) | 34, 455, 481, 1070 |
| FriOI | GRGCYC | 1 cut(s) | 294 |
| Fsp4HI | GCNGC | 3 cut(s) | 77, 1215, 1218 |
| FspBI | CTAG | 5 cut(s) | 432, 984, 1065, 1232, 1279 |
| GlaI | GCGC | 1 cut(s) | 480 |
| GluI | GCNGC | 3 cut(s) | 77, 1215, 1218 |
| GsuI | CTGGAG | 2 cut(s) | 296, 798 |
| HaeIII | GGCC | 1 cut(s) | 175 |
| HapII | CCGG | 1 cut(s) | 1088 |
| HgaI | GACGC | 1 cut(s) | 1182 |
| HhaI | GCGC | 1 cut(s) | 481 |
| Hin1II | CATG | 6 cut(s) | 32, 188, 211, 817, 1197, 1228 |
| Hin6I | GCGC | 1 cut(s) | 479 |
| HinP1I | GCGC | 1 cut(s) | 479 |
| HincII | GTYRAC | 1 cut(s) | 723 |
| HindII | GTYRAC | 1 cut(s) | 723 |
| HindIII | AAGCTT | 3 cut(s) | 65, 144, 791 |
| HinfI | GANTC | 4 cut(s) | 55, 111, 881, 1165 |
| HpaI | GTTAAC | 1 cut(s) | 723 |
| HpaII | CCGG | 1 cut(s) | 1088 |
| HphI | GGTGA | 4 cut(s) | 173, 344, 818, 1105 |
| Hpy166II | GTNNAC | 4 cut(s) | 708, 723, 862, 997 |
| Hpy188I | TCNGA | 8 cut(s) | 156, 265, 763, 893, 1011, 1172, 1251, 1269 |
| Hpy188III | TCNNGA | 6 cut(s) | 320, 530, 832, 869, 1033, 1225 |
| Hpy8I | GTNNAC | 4 cut(s) | 708, 723, 862, 997 |
| HpyAV | CCTTC | 3 cut(s) | 634, 838, 1010 |
| HpyCH4III | ACNGT | 6 cut(s) | 315, 332, 633, 714, 720, 1030 |
| HpyCH4IV | ACGT | 3 cut(s) | 120, 461, 725 |
| HpyCH4V | TGCA | 8 cut(s) | 102, 202, 235, 419, 472, 918, 1106, 1220 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 73, 85, 130, 478, 924, 1156 |
| HpyF3I | CTNAG | 1 cut(s) | 1169 |
| HpySE526I | ACGT | 3 cut(s) | 120, 461, 725 |
| Hsp92II | CATG | 6 cut(s) | 32, 188, 211, 817, 1197, 1228 |
| HspAI | GCGC | 1 cut(s) | 479 |
| KspAI | GTTAAC | 1 cut(s) | 723 |
| Kzo9I | GATC | 3 cut(s) | 445, 1141, 1227 |
| Lsp1109I | GCAGC | 3 cut(s) | 88, 1201, 1204 |
| LweI | GCATC | 5 cut(s) | 56, 111, 459, 687, 936 |
| MaeI | CTAG | 5 cut(s) | 432, 984, 1065, 1232, 1279 |
| MaeII | ACGT | 3 cut(s) | 120, 461, 725 |
| MaeIII | GTNAC | 4 cut(s) | 434, 714, 734, 806 |
| MalI | GATC | 3 cut(s) | 447, 1143, 1229 |
| MboI | GATC | 3 cut(s) | 445, 1141, 1227 |
| MboII | GAAGA | 6 cut(s) | 143, 224, 627, 662, 880, 1051 |
| MhlI | GDGCHC | 1 cut(s) | 294 |
| MluCI | AATT | 7 cut(s) | 38, 157, 339, 359, 747, 849, 1017 |
| MlyI | GAGTC | 1 cut(s) | 890 |
| MmeI | TCCRAC | 1 cut(s) | 945 |
| MnlI | CCTC | 9 cut(s) | 53, 61, 90, 251, 264, 908, 958, 1007, 1036 |
| MroXI | GAANNNNTTC | 1 cut(s) | 747 |
| MseI | TTAA | 6 cut(s) | 41, 69, 219, 722, 789, 978 |
| MslI | CAYNNNNRTG | 1 cut(s) | 645 |
| MspI | CCGG | 1 cut(s) | 1088 |
| MspR9I | CCNGG | 2 cut(s) | 1088, 1089 |
| Mva1269I | GAATGC | 1 cut(s) | 1132 |
| MvnI | CGCG | 1 cut(s) | 1176 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 73, 85, 130, 478, 924, 1156 |
| NciI | CCSGG | 2 cut(s) | 1088, 1089 |
| NcoI | CCATGG | 2 cut(s) | 184, 1193 |
| NdeI | CATATG | 1 cut(s) | 907 |
| NdeII | GATC | 3 cut(s) | 445, 1141, 1227 |
| NlaIII | CATG | 6 cut(s) | 32, 188, 211, 817, 1197, 1228 |
| NlaIV | GGNNCC | 4 cut(s) | 197, 429, 744, 1151 |
| NmuCI | GTSAC | 1 cut(s) | 806 |
| NspI | RCATGY | 1 cut(s) | 817 |
| NspV | TTCGAA | 1 cut(s) | 796 |
| PagI | TCATGA | 1 cut(s) | 1224 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1150 |
| PctI | GAATGC | 1 cut(s) | 1132 |
| PdmI | GAANNNNTTC | 1 cut(s) | 747 |
| PfeI | GAWTC | 3 cut(s) | 55, 111, 1165 |
| PkrI | GCNGC | 3 cut(s) | 78, 1216, 1219 |
| PleI | GAGTC | 1 cut(s) | 889 |
| PpsI | GAGTC | 1 cut(s) | 889 |
| PshBI | ATTAAT | 1 cut(s) | 41 |
| PsiI | TTATAA | 3 cut(s) | 485, 1022, 1137 |
| Psp124BI | GAGCTC | 1 cut(s) | 294 |
| Psp1406I | AACGTT | 1 cut(s) | 725 |
| PspN4I | GGNNCC | 4 cut(s) | 197, 429, 744, 1151 |
| PspPI | GGNCC | 1 cut(s) | 173 |
| RsaI | GTAC | 2 cut(s) | 281, 996 |
| RsaNI | GTAC | 2 cut(s) | 280, 995 |
| RseI | CAYNNNNRTG | 1 cut(s) | 645 |
| SacI | GAGCTC | 1 cut(s) | 294 |
| SaqAI | TTAA | 6 cut(s) | 41, 69, 219, 722, 789, 978 |
| SatI | GCNGC | 3 cut(s) | 77, 1215, 1218 |
| Sau3AI | GATC | 3 cut(s) | 445, 1141, 1227 |
| Sau96I | GGNCC | 1 cut(s) | 173 |
| SchI | GAGTC | 1 cut(s) | 890 |
| ScrFI | CCNGG | 2 cut(s) | 1088, 1089 |
| SduI | GDGCHC | 1 cut(s) | 294 |
| SfaNI | GCATC | 5 cut(s) | 56, 111, 459, 687, 936 |
| SfuI | TTCGAA | 1 cut(s) | 796 |
| SmaI | CCCGGG | 1 cut(s) | 1089 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 645 |
| SmlI | CTYRAG | 3 cut(s) | 13, 530, 1033 |
| SmoI | CTYRAG | 3 cut(s) | 13, 530, 1033 |
| Sse9I | AATT | 7 cut(s) | 38, 157, 339, 359, 747, 849, 1017 |
| SsiI | CCGC | 2 cut(s) | 409, 854 |
| SspMI | CTAG | 5 cut(s) | 432, 984, 1065, 1232, 1279 |
| SstI | GAGCTC | 1 cut(s) | 294 |
| StyD4I | CCNGG | 2 cut(s) | 1086, 1087 |
| StyI | CCWWGG | 4 cut(s) | 184, 518, 1193, 1231 |
| TaaI | ACNGT | 6 cut(s) | 315, 332, 633, 714, 720, 1030 |
| TaiI | ACGT | 3 cut(s) | 123, 464, 728 |
| TaqI | TCGA | 9 cut(s) | 53, 58, 288, 319, 504, 796, 819, 831, 868 |
| TaqII | GACCGA | 1 cut(s) | 264 |
| TasI | AATT | 7 cut(s) | 38, 157, 339, 359, 747, 849, 1017 |
| TatI | WGTACW | 1 cut(s) | 994 |
| TfiI | GAWTC | 3 cut(s) | 55, 111, 1165 |
| Tru1I | TTAA | 6 cut(s) | 41, 69, 219, 722, 789, 978 |
| Tru9I | TTAA | 6 cut(s) | 41, 69, 219, 722, 789, 978 |
| TscAI | CASTG | 5 cut(s) | 320, 358, 456, 481, 808 |
| TseFI | GTSAC | 1 cut(s) | 806 |
| TseI | GCWGC | 3 cut(s) | 76, 1214, 1217 |
| Tsp45I | GTSAC | 1 cut(s) | 806 |
| TspDTI | ATGAA | 4 cut(s) | 153, 579, 663, 1234 |
| TspMI | CCCGGG | 1 cut(s) | 1087 |
| TspRI | CASTG | 5 cut(s) | 320, 358, 456, 481, 808 |
| VspI | ATTAAT | 1 cut(s) | 41 |
| XapI | RAATTY | 3 cut(s) | 157, 359, 849 |
| XceI | RCATGY | 1 cut(s) | 817 |
| XmaI | CCCGGG | 1 cut(s) | 1087 |
| XmaJI | CCTAGG | 1 cut(s) | 1231 |
| XmiI | GTMKAC | 1 cut(s) | 707 |
| XmnI | GAANNNNTTC | 1 cut(s) | 747 |
| XspI | CTAG | 5 cut(s) | 432, 984, 1065, 1232, 1279 |