RchiOBHm_Chr5g0063201

UPF0481 protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000351
Physical Location & Seq
Reverse (-)
68919582 .. 68922957
3376 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ33933

Sequence Viewer

Length: 1353 bp
ATGACGGAGAGTAGCGTAAATGATCACGTGTTGATTGAAATCCGAGATGGAGGAGGATATGTCAATGTGAATAAGCAAACTCCGAGTGGAAATAGCATGGGGGACAAATTATTGGCATCCCAGATTAGAGATAAGTTGAGCCTGCTGTCTCCATTACCAGTTCCTAGTTGCATATTTAAGATCCCTAGTGTGCTGCGAAGTCAGGTTGAAAATAAGGATTTCGGTACTCCGGATCTGGTTTCAATTGGGCCATTTCACCATGAAAAAGTGAACCTGCAAGCCATGGAAAAAATCAAACTGCGATATCTGCGTTCTCTCCTTGTTCGAAAGCCGACTCCAGAGACCACCTTGGAGAACTTTGTCAGAGAAATCCGGAGTATGGAAGTAGATTGTGGTGATTGCTATGATGGAGAGATTGAAGCGAGTAGTGATAAGTTTGTGGAAATGATGGTGGTTGATGCTTGCTTTATCATTGAGCTGTTTCGAAAGTTTTCAGGAGAGGTGCCCAAAGAGGAGAATGATCCTGTGTTCTGTAGGTCATGGATGCGCACGGCTCTTATAAATGACTTAATTCTACTCTCGAACCAGCTTCCTTGGAAAGTTCTCAGCCGTTTATTTGAGCTTACGTGGGAAACAGGTAAACACCATCTTCATGACCTTATTCTCGAGTACTTCAAGGGCTACACATTTGGATTGTCTCCACAAGCCAATGGAGAAATTGAAAATAAACATGTACTGGACTTCTTCAGAAATTGCTTTCTTGACTCATTTGAAACCAAAATGTCTGAGTTTAAGGACTTGAGTTCGAACTCAATTCCCTCTGCTGAAAGACTTTTCAATGCTGGAGTAAGGTTTGCGCATGGGCCTCGTAATAGCATGCTCAACATAGTTTTCTGCAATGGGATTCTGAAAATTCCGCCCATACGAGTTCAGAAGTACGAAGTATCCTTCCTTAGAAACCTCATCGCATATGAACAGTGTGCACCAATTACAGGTGTAATCACCTCTTATGTTTCGTTGTTAGGTGACCTCATTAGGGAAGAGAGAGATGCACAGATTCTCCTGAATCGAGGAATTATACAAGGCTTCTCAAGCGAGGAGGGTATAGCCTCCTTGATCAGTCTGCGCGCTGACCTCCAAATATGCAGTTCCCCGTACACCACACTCTATGAGAATGTGAATCGATTTACTGCAGTTAGGTGGAACGTATGGAGGGCGATATTAATCAACGATTATTTCAAGAATCCATTAGATTTTGTGAATCTTAGTGTTGGCGTCTTCTTCGTGACATTTTTGACCTTAATTCAAACCATAATTTCCATTGCGTCTTACCACAAACCGCAATCACAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

450

Amino Acids

51.26

Weight (kDa)

5.92

Isoelectric Point (pI)

43.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 58 - 429 1e-93 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000351)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g16420 FvH4_6g39730
malus_domestica MD02G1081100.v1.1 MD02G1081200.v1.1 MD09G1249600.v1.1 MD09G1250500.v1.1 MD09G1250900.v1.1 MD15G1081900.v1.1 MD15G1208800.v1.1 MD17G1242700.v1.1 MD17G1242800.v1.1 MD17G1242900.v1.1 MD17G1243200.v1.1
prunus_persica Prupe.3G130000_v2.0.a1 Prupe.3G130100_v2.0.a1 Prupe.3G130300_v2.0.a1 Prupe.3G130400_v2.0.a1 Prupe.3G130400_v2.0.a1 Prupe.3G130400_v2.0.a1 Prupe.3G130500_v2.0.a1 Prupe.3G136500_v2.0.a1 Prupe.3G141700_v2.0.a1 Prupe.3G141800_v2.0.a1 Prupe.3G141900_v2.0.a1 Prupe.3G155700_v2.0.a1 Prupe.7G207700_v2.0.a1 Prupe.7G207800_v2.0.a1 Prupe.7G207900_v2.0.a1 Prupe.7G207900_v2.0.a1 Prupe.7G208100_v2.0.a1 Prupe.7G208100_v2.0.a1 Prupe.7G208100_v2.0.a1 Prupe.7G208100_v2.0.a1
pyrus_communis pycom09g16640 pycom09g16690 pycom15g07650 pycom17g24550 pycom17g24560 pycom17g24570 pycom17g24670
rosa_chinensis RchiOBHm_Chr2g0153821 RchiOBHm_Chr2g0163501 RchiOBHm_Chr2g0163511 RchiOBHm_Chr2g0163521 RchiOBHm_Chr5g0063201 RchiOBHm_Chr7g0229231 RchiOBHm_Chr7g0229251
rosa_laevigata RLG00000001520 RLG00000020727 RLG00000020731 RLG00000021394 RLG00000022074 RLG00000023249
rosa_multiflora Rmu_sc0000235.1_g000044 Rmu_sc0000693.1_g000020 Rmu_sc0000693.1_g000032 Rmu_sc0002053.1_g000010 Rmu_sc0002053.1_g000011 Rmu_sc0003887.1_g000020 Rmu_sc0004278.1_g000001 Rmu_sc0012759.1_g000001
rosa_roxburghii Rroxscaffold_2G00087170 Rroxscaffold_2G00087180 Rroxscaffold_2G00087190 Rroxscaffold_2G00087230 Rroxscaffold_2G00087250 Rroxscaffold_2G00087320 Rroxscaffold_2G00094720 Rroxscaffold_3G00230450 Rroxscaffold_3G00230460
rosa_rugosa Rorug02G0442300.1 Rorug02G0442400 Rorug02G0503400 Rorug02G0503500 Rorug02G0560600 Rorug05G0355000 Rorug05G0355100 Rorug07G0258000
rosa_samantha Rh2AG185500 Rh2AG506100 Rh2AG506200 Rh2AG570300 Rh2AG570400 Rh2BG515600 Rh2BG582500 Rh2BG582600 Rh2BG582700 Rh2CG491600 Rh2CG491700 Rh2CG552300 Rh2CG552400 Rh2CG617700 Rh2CG617800 Rh2DG528100 Rh2DG592200 Rh2DG592300 Rh2DG592400 Rh2DG665500 Rh5CG234300 Rh5DG460600 Rh7AG407800 Rh7BG387600 Rh7CG426800 Rh7CG427000 Rh7DG402900
rosa_wichuraiana Rw0G001890 Rw2G041540 Rw2G047220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 560
Acc16I TGCGCA 2 cut(s) 548, 858
Acc36I ACCTGC 1 cut(s) 282
AccB1I GGYRCC 1 cut(s) 502
AccII CGCG 1 cut(s) 1128
AccIII TCCGGA 2 cut(s) 229, 372
AciI CCGC 2 cut(s) 917, 1340
AclWI GGATC 3 cut(s) 175, 240, 515
AcsI RAATTY 1 cut(s) 912
AcuI CTGAAG 1 cut(s) 730
AcvI CACGTG 1 cut(s) 28
AcyI GRCGYC 1 cut(s) 1275
AfaI GTAC 5 cut(s) 226, 671, 735, 938, 1157
AfiI CCNNNNNNNGG 3 cut(s) 379, 992, 1036
AflIII ACRYGT 2 cut(s) 27, 730
AluBI AGCT 3 cut(s) 478, 589, 622
AluI AGCT 3 cut(s) 478, 589, 622
Alw21I GWGCWC 1 cut(s) 985
Alw26I GTCTC 3 cut(s) 153, 335, 702
Alw44I GTGCAC 1 cut(s) 981
AlwI GGATC 3 cut(s) 175, 240, 515
Ama87I CYCGRG 1 cut(s) 665
Aor13HI TCCGGA 2 cut(s) 229, 372
AoxI GGCC 2 cut(s) 248, 863
ApaLI GTGCAC 1 cut(s) 981
ApeKI GCWGC 1 cut(s) 193
ApoI RAATTY 1 cut(s) 912
AseI ATTAAT 1 cut(s) 1223
Asp700I GAANNNNTTC 1 cut(s) 490
AspLEI GCGC 4 cut(s) 549, 859, 1128, 1130
AspS9I GGNCC 2 cut(s) 248, 863
AsuHPI GGTGA 4 cut(s) 248, 407, 994, 1037
AsuII TTCGAA 3 cut(s) 325, 484, 806
AvaI CYCGRG 1 cut(s) 665
BaeGI GKGCMC 2 cut(s) 507, 985
BanI GGYRCC 1 cut(s) 502
BbrPI CACGTG 1 cut(s) 28
BbsI GAAGAC 1 cut(s) 1270
Bbv12I GWGCWC 1 cut(s) 985
BbvI GCAGC 1 cut(s) 180
BccI CCATC 4 cut(s) 41, 401, 442, 654
BceAI ACGGC 2 cut(s) 567, 594
BcgI CGANNNNNNTGC 2 cut(s) 848, 882
BciVI GTATCC 1 cut(s) 955
BclI TGATCA 2 cut(s) 22, 1116
BcoDI GTCTC 3 cut(s) 153, 335, 702
BfaI CTAG 2 cut(s) 165, 186
BfmI CTRYAG 2 cut(s) 532, 1191
BfuAI ACCTGC 1 cut(s) 282
BfuI GTATCC 1 cut(s) 955
BisI GCNGC 1 cut(s) 194
BlsI GCNGC 1 cut(s) 195
BmcAI AGTACT 1 cut(s) 671
BmeT110I CYCGRG 1 cut(s) 665
BmgT120I GGNCC 2 cut(s) 248, 863
BmiI GGNNCC 1 cut(s) 504
BmsI GCATC 4 cut(s) 125, 448, 534, 1039
BpiI GAAGAC 1 cut(s) 1270
BpmI CTGGAG 2 cut(s) 321, 864
Bpu14I TTCGAA 3 cut(s) 325, 484, 806
BpuEI CTTGAG 2 cut(s) 820, 1075
Bsa29I ATCGAT 1 cut(s) 1183
BsaAI YACGTR 2 cut(s) 28, 627
BsaBI GATNNNNATC 2 cut(s) 38, 1223
BsaHI GRCGYC 1 cut(s) 1275
BsaI GGTCTC 1 cut(s) 335
BsaJI CCNNGG 3 cut(s) 282, 348, 593
BsaWI WCCGGW 2 cut(s) 229, 372
BsaXI ACNNNNNCTCC 4 cut(s) 45, 75, 1044, 1074
Bsc4I CCNNNNNNNGG 3 cut(s) 379, 992, 1036
Bse1I ACTGG 2 cut(s) 158, 741
Bse3DI GCAATG 2 cut(s) 904, 1320
Bse8I GATNNNNATC 2 cut(s) 38, 1223
BseAI TCCGGA 2 cut(s) 229, 372
BseCI ATCGAT 1 cut(s) 1183
BseDI CCNNGG 3 cut(s) 282, 348, 593
BseGI GGATG 2 cut(s) 116, 549
BseJI GATNNNNATC 2 cut(s) 38, 1223
BseLI CCNNNNNNNGG 3 cut(s) 379, 992, 1036
BseMI GCAATG 2 cut(s) 904, 1320
BseMII CTCAG 2 cut(s) 619, 777
BseNI ACTGG 2 cut(s) 158, 741
BsePI GCGCGC 1 cut(s) 1126
BseRI GAGGAG 3 cut(s) 66, 527, 1112
BseSI GKGCMC 2 cut(s) 507, 985
BseXI GCAGC 1 cut(s) 180
Bsh1236I CGCG 1 cut(s) 1128
BshFI GGCC 2 cut(s) 250, 865
BshNI GGYRCC 1 cut(s) 502
BshVI ATCGAT 1 cut(s) 1183
BsiHKAI GWGCWC 1 cut(s) 985
BsiHKCI CYCGRG 1 cut(s) 665
BsiSI CCGG 2 cut(s) 230, 373
BslFI GGGAC 1 cut(s) 116
BslI CCNNNNNNNGG 3 cut(s) 379, 992, 1036
BsmAI GTCTC 3 cut(s) 153, 335, 702
BsmFI GGGAC 1 cut(s) 116
BsnI GGCC 2 cut(s) 250, 865
Bso31I GGTCTC 1 cut(s) 335
BsoBI CYCGRG 1 cut(s) 665
Bsp119I TTCGAA 3 cut(s) 325, 484, 806
Bsp1286I GDGCHC 2 cut(s) 507, 985
Bsp13I TCCGGA 2 cut(s) 229, 372
Bsp143I GATC 5 cut(s) 22, 180, 232, 520, 1116
Bsp19I CCATGG 1 cut(s) 282
BspACI CCGC 2 cut(s) 917, 1340
BspANI GGCC 2 cut(s) 250, 865
BspCNI CTCAG 2 cut(s) 618, 778
BspDI ATCGAT 1 cut(s) 1183
BspEI TCCGGA 2 cut(s) 229, 372
BspFNI CGCG 1 cut(s) 1128
BspHI TCATGA 1 cut(s) 652
BspLI GGNNCC 1 cut(s) 504
BspMAI CTGCAG 1 cut(s) 1195
BspMI ACCTGC 1 cut(s) 282
BspPI GGATC 3 cut(s) 175, 240, 515
BspT104I TTCGAA 3 cut(s) 325, 484, 806
BspT107I GGYRCC 1 cut(s) 502
BspTNI GGTCTC 1 cut(s) 335
BsrDI GCAATG 2 cut(s) 904, 1320
BsrI ACTGG 2 cut(s) 158, 741
BssECI CCNNGG 3 cut(s) 282, 348, 593
BssHII GCGCGC 1 cut(s) 1126
BssMI GATC 5 cut(s) 22, 180, 232, 520, 1116
BssNI GRCGYC 1 cut(s) 1275
BssT1I CCWWGG 3 cut(s) 282, 348, 593
Bst4CI ACNGT 1 cut(s) 978
Bst6I CTCTTC 1 cut(s) 1035
BstACI GRCGYC 1 cut(s) 1275
BstBAI YACGTR 2 cut(s) 28, 627
BstBI TTCGAA 3 cut(s) 325, 484, 806
BstC8I GCNNGC 5 cut(s) 143, 279, 463, 878, 1128
BstDEI CTNAG 4 cut(s) 605, 786, 953, 1265
BstDSI CCRYGG 1 cut(s) 282
BstEII GGTNACC 1 cut(s) 1025
BstF5I GGATG 2 cut(s) 116, 549
BstFNI CGCG 1 cut(s) 1128
BstHHI GCGC 4 cut(s) 549, 859, 1128, 1130
BstKTI GATC 5 cut(s) 25, 183, 235, 523, 1119
BstMAI GTCTC 3 cut(s) 153, 335, 702
BstMBI GATC 5 cut(s) 22, 180, 232, 520, 1116
BstMWI GCNNNNNNNGC 2 cut(s) 307, 1092
BstNSI RCATGY 2 cut(s) 734, 880
BstPI GGTNACC 1 cut(s) 1025
BstSFI CTRYAG 2 cut(s) 532, 1191
BstSLI GKGCMC 2 cut(s) 507, 985
BstUI CGCG 1 cut(s) 1128
BstV1I GCAGC 1 cut(s) 180
BstV2I GAAGAC 1 cut(s) 1270
BstX2I RGATCY 2 cut(s) 180, 232
BstYI RGATCY 2 cut(s) 180, 232
Bsu15I ATCGAT 1 cut(s) 1183
BsuI GTATCC 1 cut(s) 955
BsuRI GGCC 2 cut(s) 250, 865
BsuTUI ATCGAT 1 cut(s) 1183
BtgI CCRYGG 1 cut(s) 282
BtgZI GCGATG 1 cut(s) 949
BtsCI GGATG 2 cut(s) 116, 549
BtsIMutI CAGTG 1 cut(s) 983
BveI ACCTGC 1 cut(s) 282
Cac8I GCNNGC 5 cut(s) 143, 279, 463, 878, 1128
CciI TCATGA 1 cut(s) 652
CfoI GCGC 4 cut(s) 549, 859, 1128, 1130
Cfr13I GGNCC 2 cut(s) 248, 863
ClaI ATCGAT 1 cut(s) 1183
CseI GACGC 2 cut(s) 1264, 1314
Csp6I GTAC 5 cut(s) 225, 670, 734, 937, 1156
CviAII CATG 8 cut(s) 97, 260, 283, 540, 653, 731, 860, 877
CviQI GTAC 5 cut(s) 225, 670, 734, 937, 1156
DdeI CTNAG 4 cut(s) 605, 786, 953, 1265
DpnI GATC 5 cut(s) 24, 182, 234, 522, 1118
DpnII GATC 5 cut(s) 22, 180, 232, 520, 1116
Eam1104I CTCTTC 1 cut(s) 1035
EarI CTCTTC 1 cut(s) 1035
EciI GGCGGA 1 cut(s) 906
Eco130I CCWWGG 3 cut(s) 282, 348, 593
Eco31I GGTCTC 1 cut(s) 335
Eco32I GATATC 1 cut(s) 305
Eco57I CTGAAG 1 cut(s) 730
Eco72I CACGTG 1 cut(s) 28
Eco88I CYCGRG 1 cut(s) 665
Eco91I GGTNACC 1 cut(s) 1025
EcoO65I GGTNACC 1 cut(s) 1025
EcoRV GATATC 1 cut(s) 305
EcoT14I CCWWGG 3 cut(s) 282, 348, 593
ErhI CCWWGG 3 cut(s) 282, 348, 593
FaeI CATG 8 cut(s) 100, 263, 286, 543, 656, 734, 863, 880
FaqI GGGAC 1 cut(s) 116
FatI CATG 8 cut(s) 96, 259, 282, 539, 652, 730, 859, 876
FauNDI CATATG 1 cut(s) 970
FbaI TGATCA 2 cut(s) 22, 1116
Fnu4HI GCNGC 1 cut(s) 194
FokI GGATG 2 cut(s) 103, 556
Fsp4HI GCNGC 1 cut(s) 194
FspAI RTGCGCAY 1 cut(s) 548
FspBI CTAG 2 cut(s) 165, 186
FspI TGCGCA 2 cut(s) 548, 858
GlaI GCGC 4 cut(s) 548, 858, 1127, 1129
GluI GCNGC 1 cut(s) 194
GsuI CTGGAG 2 cut(s) 321, 864
HaeIII GGCC 2 cut(s) 250, 865
HapII CCGG 2 cut(s) 230, 373
HgaI GACGC 2 cut(s) 1264, 1314
HhaI GCGC 4 cut(s) 549, 859, 1128, 1130
Hin1I GRCGYC 1 cut(s) 1275
Hin1II CATG 8 cut(s) 100, 263, 286, 543, 656, 734, 863, 880
Hin6I GCGC 4 cut(s) 547, 857, 1126, 1128
HinP1I GCGC 4 cut(s) 547, 857, 1126, 1128
HinfI GANTC 8 cut(s) 334, 764, 904, 1057, 1066, 1180, 1243, 1261
HpaII CCGG 2 cut(s) 230, 373
HphI GGTGA 4 cut(s) 248, 407, 994, 1037
Hpy166II GTNNAC 4 cut(s) 271, 641, 983, 1158
Hpy188I TCNGA 7 cut(s) 44, 84, 365, 749, 787, 909, 933
Hpy8I GTNNAC 4 cut(s) 271, 641, 983, 1158
HpyAV CCTTC 1 cut(s) 958
HpyCH4III ACNGT 1 cut(s) 978
HpyCH4IV ACGT 3 cut(s) 27, 626, 1206
HpyCH4V TGCA 7 cut(s) 171, 277, 897, 983, 1052, 1146, 1193
HpyF10VI GCNNNNNNNGC 2 cut(s) 307, 1092
HpyF3I CTNAG 4 cut(s) 605, 786, 953, 1265
HpySE526I ACGT 3 cut(s) 27, 626, 1206
Hsp92I GRCGYC 1 cut(s) 1275
Hsp92II CATG 8 cut(s) 100, 263, 286, 543, 656, 734, 863, 880
HspAI GCGC 4 cut(s) 547, 857, 1126, 1128
Kpn2I TCCGGA 2 cut(s) 229, 372
Ksp22I TGATCA 2 cut(s) 22, 1116
Kzo9I GATC 5 cut(s) 22, 180, 232, 520, 1116
Lsp1109I GCAGC 1 cut(s) 180
LweI GCATC 4 cut(s) 125, 448, 534, 1039
MaeI CTAG 2 cut(s) 165, 186
MaeII ACGT 3 cut(s) 27, 626, 1206
MaeIII GTNAC 2 cut(s) 1025, 1285
MalI GATC 5 cut(s) 24, 182, 234, 522, 1118
MboI GATC 5 cut(s) 22, 180, 232, 520, 1116
MboII GAAGA 5 cut(s) 641, 736, 1052, 1270, 1273
MfeI CAATTG 1 cut(s) 243
MflI RGATCY 2 cut(s) 180, 232
MhlI GDGCHC 2 cut(s) 507, 985
MlyI GAGTC 2 cut(s) 328, 758
MroI TCCGGA 2 cut(s) 229, 372
MroXI GAANNNNTTC 1 cut(s) 490
MseI TTAA 5 cut(s) 177, 569, 792, 1223, 1301
MslI CAYNNNNRTG 1 cut(s) 651
MspI CCGG 2 cut(s) 230, 373
MunI CAATTG 1 cut(s) 243
MvnI CGCG 1 cut(s) 1128
MwoI GCNNNNNNNGC 2 cut(s) 307, 1092
NcoI CCATGG 1 cut(s) 282
NdeI CATATG 1 cut(s) 970
NdeII GATC 5 cut(s) 22, 180, 232, 520, 1116
NlaIII CATG 8 cut(s) 100, 263, 286, 543, 656, 734, 863, 880
NlaIV GGNNCC 1 cut(s) 504
NmuCI GTSAC 2 cut(s) 1025, 1285
NsbI TGCGCA 2 cut(s) 548, 858
NspI RCATGY 2 cut(s) 734, 880
NspV TTCGAA 3 cut(s) 325, 484, 806
PaeI GCATGC 1 cut(s) 880
PaeR7I CTCGAG 1 cut(s) 665
PagI TCATGA 1 cut(s) 652
PauI GCGCGC 1 cut(s) 1126
PciI ACATGT 1 cut(s) 730
PdmI GAANNNNTTC 1 cut(s) 490
PfeI GAWTC 6 cut(s) 904, 1057, 1066, 1180, 1243, 1261
PkrI GCNGC 1 cut(s) 195
PleI GAGTC 2 cut(s) 328, 758
PmaCI CACGTG 1 cut(s) 28
PmlI CACGTG 1 cut(s) 28
PpsI GAGTC 2 cut(s) 328, 758
Ppu21I YACGTR 2 cut(s) 28, 627
PscI ACATGT 1 cut(s) 730
PshBI ATTAAT 1 cut(s) 1223
PsiI TTATAA 1 cut(s) 560
PspCI CACGTG 1 cut(s) 28
PspEI GGTNACC 1 cut(s) 1025
PspN4I GGNNCC 1 cut(s) 504
PspPI GGNCC 2 cut(s) 248, 863
PstI CTGCAG 1 cut(s) 1195
PsuI RGATCY 2 cut(s) 180, 232
PteI GCGCGC 1 cut(s) 1126
RsaI GTAC 5 cut(s) 226, 671, 735, 938, 1157
RsaNI GTAC 5 cut(s) 225, 670, 734, 937, 1156
RseI CAYNNNNRTG 1 cut(s) 651
SaqAI TTAA 5 cut(s) 177, 569, 792, 1223, 1301
SatI GCNGC 1 cut(s) 194
Sau3AI GATC 5 cut(s) 22, 180, 232, 520, 1116
Sau96I GGNCC 2 cut(s) 248, 863
ScaI AGTACT 1 cut(s) 671
SchI GAGTC 2 cut(s) 328, 758
SduI GDGCHC 2 cut(s) 507, 985
SfaNI GCATC 4 cut(s) 125, 448, 534, 1039
SfcI CTRYAG 2 cut(s) 532, 1191
Sfr274I CTCGAG 1 cut(s) 665
SfuI TTCGAA 3 cut(s) 325, 484, 806
SlaI CTCGAG 1 cut(s) 665
SmiMI CAYNNNNRTG 1 cut(s) 651
SmlI CTYRAG 3 cut(s) 665, 799, 1090
SmoI CTYRAG 3 cut(s) 665, 799, 1090
SphI GCATGC 1 cut(s) 880
SsiI CCGC 2 cut(s) 917, 1340
SspMI CTAG 2 cut(s) 165, 186
StyI CCWWGG 3 cut(s) 282, 348, 593
TaaI ACNGT 1 cut(s) 978
TaiI ACGT 3 cut(s) 30, 629, 1209
TaqI TCGA 7 cut(s) 325, 484, 581, 666, 806, 1069, 1183
TatI WGTACW 2 cut(s) 669, 733
TfiI GAWTC 6 cut(s) 904, 1057, 1066, 1180, 1243, 1261
Tru1I TTAA 5 cut(s) 177, 569, 792, 1223, 1301
Tru9I TTAA 5 cut(s) 177, 569, 792, 1223, 1301
TscAI CASTG 1 cut(s) 983
TseFI GTSAC 2 cut(s) 1025, 1285
TseI GCWGC 1 cut(s) 193
Tsp45I GTSAC 2 cut(s) 1025, 1285
TspDTI ATGAA 3 cut(s) 276, 641, 987
TspGWI ACGGA 1 cut(s) 20
TspRI CASTG 1 cut(s) 983
VneI GTGCAC 1 cut(s) 981
VspI ATTAAT 1 cut(s) 1223
XapI RAATTY 1 cut(s) 912
XceI RCATGY 2 cut(s) 734, 880
XhoI CTCGAG 1 cut(s) 665
XmnI GAANNNNTTC 1 cut(s) 490
XspI CTAG 2 cut(s) 165, 186
ZrmI AGTACT 1 cut(s) 671
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.