Rh2AG506200

UPF0481 protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0000351
Physical Location & Seq
Reverse (-)
72856835 .. 72861612
4778 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG506200.1

Sequence Viewer

Length: 1443 bp
ATGTTGAAATTTGATAGTAACAATATAAAGTGCACTTCGACTAAGTATCTTGAAGTCAGAAGCAGTTGCAGGATGACAGAGAGCAATGTGAATGAGCACTACTTGATCGAAATTAAAGAAGAGGAAGAGAGTGTGATAGCAGCAAACAATGTGAAAAACCAGACTTCGAGTGGAAATCAAAATGAGGAGAGTGTCAACATAGCATCCTCCATTAGAAGAAAGCTACCTAGCAAAGCACCATCACCACCTAGTACTTGCATATACAGAGTCCCTGATGCACTAAAGAAGCTTCACAAAAATGATTTTGTTCCTAGTTTAGTTTCAATTGGACCATTTCACCATGGCACAAAGAATCTGCAAGCCATGGAAGAATTTAAGCTTTGGTACTTGCACCAGCTGCTTGATCGAAAACCCAATCTTGAGACCAAATTGGAGCACATTGTTGAAAAAATCAGAAGCATGGAAGACTATTGTCGTGAATGCTATAATGAAAAACTTGATCATCTGAGCAGTGAAGCATTTGTAGAAATGATGGTGGTTGACGGCTGCTTTATTCTTGAATACTACCGCAAAAGAAAAGGAGAAGTGCCTGCAGACGCGGATGATCCACTGTTCAATATTAGTTTAGCAATGTTGCCAACACTTACAAGTGACTTGGTTATGCTAGAAAACCAGCTGCCTTGGAGAGTTCTTGACTGTTTATTCCAACTCACAAAAGTACCTAATGGAATGTACAAGTCACTATCTGAGCTTACTCGCAGTTGTCTCCCGATTTGGGGGTCCGTGTCTGATGATCATCTAGAGCAGACATTGGAAAGCAGACATTTACTTGACAATGTCAGGATCCTTTCTACTGAATTAGACAAGAAAGAGGAGATTATGCCATTTTGGGACTCTATGCCCTCTGCATCGCAACTTCAGCAAATTGGAGTCATATTTCAACCCAACAGAAATAACATCAACATAAACATAACCTTCCTCGAGGGAGTGATGGAGATTGCACCAATAACCATCCAGGGTGATAATCCTGTCTTTAGAAACCTCATCGCCTTGGAACAGTGTGAATCAGGGCCCCATAAGTATCAAATTAGCACTTATGCCAGGGCATTGGGTGACCTTATTAAATCTAGTAAAGATGTGGAGTTTCTCATGGAGAAAGAGATTATTCATACCAGTTTAAACAAGGAAGACATAGCCGATTTCTTCAACAACATTTGCAATGGTTTTGCAACTTCCTCCTGCTGCAAGTCTTTTTGGCAAGTTTCCTTGACAGTGAGACAGTATTATAAACAACATTGGCTACAAAGATTGATAGTATACATCAAACATAACTACTTGTACAATCCCTCATCAATATGGTCAGTTTCTAATGCAATTGTCCTTATTATAGTTCTTACGGTCCTGCAAACCATATATTCGGTCCTCTCTTACTACAAGTCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

480

Amino Acids

55.31

Weight (kDa)

5.86

Isoelectric Point (pI)

56.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 87 - 463 1.3e-93 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000351)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g16420 FvH4_6g39730
malus_domestica MD02G1081100.v1.1 MD02G1081200.v1.1 MD09G1249600.v1.1 MD09G1250500.v1.1 MD09G1250900.v1.1 MD15G1081900.v1.1 MD15G1208800.v1.1 MD17G1242700.v1.1 MD17G1242800.v1.1 MD17G1242900.v1.1 MD17G1243200.v1.1
prunus_persica Prupe.3G130000_v2.0.a1 Prupe.3G130100_v2.0.a1 Prupe.3G130300_v2.0.a1 Prupe.3G130400_v2.0.a1 Prupe.3G130400_v2.0.a1 Prupe.3G130400_v2.0.a1 Prupe.3G130500_v2.0.a1 Prupe.3G136500_v2.0.a1 Prupe.3G141700_v2.0.a1 Prupe.3G141800_v2.0.a1 Prupe.3G141900_v2.0.a1 Prupe.3G155700_v2.0.a1 Prupe.7G207700_v2.0.a1 Prupe.7G207800_v2.0.a1 Prupe.7G207900_v2.0.a1 Prupe.7G207900_v2.0.a1 Prupe.7G208100_v2.0.a1 Prupe.7G208100_v2.0.a1 Prupe.7G208100_v2.0.a1 Prupe.7G208100_v2.0.a1
pyrus_communis pycom09g16640 pycom09g16690 pycom15g07650 pycom17g24550 pycom17g24560 pycom17g24570 pycom17g24670
rosa_chinensis RchiOBHm_Chr2g0153821 RchiOBHm_Chr2g0163501 RchiOBHm_Chr2g0163511 RchiOBHm_Chr2g0163521 RchiOBHm_Chr5g0063201 RchiOBHm_Chr7g0229231 RchiOBHm_Chr7g0229251
rosa_laevigata RLG00000001520 RLG00000020727 RLG00000020731 RLG00000021394 RLG00000022074 RLG00000023249
rosa_multiflora Rmu_sc0000235.1_g000044 Rmu_sc0000693.1_g000020 Rmu_sc0000693.1_g000032 Rmu_sc0002053.1_g000010 Rmu_sc0002053.1_g000011 Rmu_sc0003887.1_g000020 Rmu_sc0004278.1_g000001 Rmu_sc0012759.1_g000001
rosa_roxburghii Rroxscaffold_2G00087170 Rroxscaffold_2G00087180 Rroxscaffold_2G00087190 Rroxscaffold_2G00087230 Rroxscaffold_2G00087250 Rroxscaffold_2G00087320 Rroxscaffold_2G00094720 Rroxscaffold_3G00230450 Rroxscaffold_3G00230460
rosa_rugosa Rorug02G0442300.1 Rorug02G0442400 Rorug02G0503400 Rorug02G0503500 Rorug02G0560600 Rorug05G0355000 Rorug05G0355100 Rorug07G0258000
rosa_samantha Rh2AG185500 Rh2AG506100 Rh2AG506200 Rh2AG570300 Rh2AG570400 Rh2BG515600 Rh2BG582500 Rh2BG582600 Rh2BG582700 Rh2CG491600 Rh2CG491700 Rh2CG552300 Rh2CG552400 Rh2CG617700 Rh2CG617800 Rh2DG528100 Rh2DG592200 Rh2DG592300 Rh2DG592400 Rh2DG665500 Rh5CG234300 Rh5DG460600 Rh7AG407800 Rh7BG387600 Rh7CG426800 Rh7CG427000 Rh7DG402900
rosa_wichuraiana Rw0G001890 Rw2G041540 Rw2G047220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1287
AbsI CCTCGAGG 1 cut(s) 980
AccI GTMKAC 1 cut(s) 1317
AccII CGCG 1 cut(s) 599
AciI CCGC 2 cut(s) 568, 599
AclWI GGATC 3 cut(s) 599, 838, 851
AcsI RAATTY 2 cut(s) 8, 371
AcuI CTGAAG 1 cut(s) 902
AfaI GTAC 5 cut(s) 253, 386, 720, 734, 1340
AfiI CCNNNNNNNGG 2 cut(s) 775, 776
AgsI TTSAA 8 cut(s) 7, 53, 324, 446, 560, 616, 941, 1207
AjnI CCWGG 2 cut(s) 1014, 1100
AluBI AGCT 6 cut(s) 223, 289, 379, 397, 676, 751
AluI AGCT 6 cut(s) 223, 289, 379, 397, 676, 751
Alw21I GWGCWC 3 cut(s) 35, 99, 438
Alw26I GTCTC 3 cut(s) 416, 770, 1270
Alw44I GTGCAC 1 cut(s) 31
AlwI GGATC 3 cut(s) 599, 838, 851
Ama87I CYCGRG 1 cut(s) 980
AoxI GGCC 1 cut(s) 1070
ApaI GGGCCC 1 cut(s) 1074
ApaLI GTGCAC 1 cut(s) 31
ApeKI GCWGC 5 cut(s) 140, 397, 546, 676, 1242
ApoI RAATTY 2 cut(s) 8, 371
AspS9I GGNCC 6 cut(s) 329, 780, 1070, 1071, 1399, 1420
AsuHPI GGTGA 4 cut(s) 234, 329, 1031, 1124
AvaI CYCGRG 1 cut(s) 980
AvaII GGWCC 4 cut(s) 329, 780, 1399, 1420
BaeGI GKGCMC 2 cut(s) 35, 1074
BaeI ACNNNNGTAYC 2 cut(s) 702, 735
BamHI GGATCC 1 cut(s) 843
BanII GRGCYC 1 cut(s) 1074
BbsI GAAGAC 2 cut(s) 471, 1194
Bbv12I GWGCWC 3 cut(s) 35, 99, 438
BbvI GCAGC 5 cut(s) 152, 384, 533, 663, 1229
BccI CCATC 4 cut(s) 247, 526, 985, 1019
BceAI ACGGC 1 cut(s) 559
BciT130I CCWGG 2 cut(s) 1016, 1102
BclI TGATCA 2 cut(s) 499, 793
BcoDI GTCTC 3 cut(s) 416, 770, 1270
BfaI CTAG 6 cut(s) 228, 249, 312, 665, 800, 1128
BfmI CTRYAG 1 cut(s) 591
BisI GCNGC 5 cut(s) 141, 398, 547, 677, 1243
BlsI GCNGC 5 cut(s) 142, 399, 548, 678, 1244
BmcAI AGTACT 1 cut(s) 253
Bme1390I CCNGG 2 cut(s) 1016, 1102
Bme18I GGWCC 4 cut(s) 329, 780, 1399, 1420
BmeT110I CYCGRG 1 cut(s) 980
BmgT120I GGNCC 6 cut(s) 329, 780, 1070, 1071, 1399, 1420
BmiI GGNNCC 4 cut(s) 781, 845, 1072, 1073
BmrFI CCNGG 2 cut(s) 1016, 1102
BmsI GCATC 3 cut(s) 212, 265, 917
BoxI GACNNNNGTC 1 cut(s) 471
BpiI GAAGAC 2 cut(s) 471, 1194
BpuEI CTTGAG 1 cut(s) 440
BsaBI GATNNNNATC 1 cut(s) 795
BsaI GGTCTC 1 cut(s) 416
BsaJI CCNNGG 6 cut(s) 340, 363, 680, 1015, 1050, 1101
Bsc4I CCNNNNNNNGG 2 cut(s) 775, 776
Bse1I ACTGG 1 cut(s) 1173
Bse3DI GCAATG 3 cut(s) 91, 636, 1225
Bse8I GATNNNNATC 1 cut(s) 795
BseBI CCWGG 2 cut(s) 1016, 1102
BseDI CCNNGG 6 cut(s) 340, 363, 680, 1015, 1050, 1101
BseGI GGATG 4 cut(s) 78, 203, 607, 1011
BseJI GATNNNNATC 1 cut(s) 795
BseLI CCNNNNNNNGG 2 cut(s) 775, 776
BseMI GCAATG 3 cut(s) 91, 636, 1225
BseMII CTCAG 2 cut(s) 497, 738
BseNI ACTGG 1 cut(s) 1173
BseRI GAGGAG 2 cut(s) 200, 887
BseSI GKGCMC 2 cut(s) 35, 1074
BseXI GCAGC 5 cut(s) 152, 384, 533, 663, 1229
Bsh1236I CGCG 1 cut(s) 599
BshFI GGCC 1 cut(s) 1072
BsiHKAI GWGCWC 3 cut(s) 35, 99, 438
BsiHKCI CYCGRG 1 cut(s) 980
BslFI GGGAC 2 cut(s) 254, 905
BslI CCNNNNNNNGG 2 cut(s) 775, 776
BsmAI GTCTC 3 cut(s) 416, 770, 1270
BsmFI GGGAC 2 cut(s) 254, 905
BsmI GAATGC 1 cut(s) 485
BsnI GGCC 1 cut(s) 1072
Bso31I GGTCTC 1 cut(s) 416
BsoBI CYCGRG 1 cut(s) 980
Bsp120I GGGCCC 1 cut(s) 1070
Bsp1286I GDGCHC 4 cut(s) 35, 99, 438, 1074
Bsp1407I TGTACA 2 cut(s) 732, 1338
Bsp143I GATC 6 cut(s) 105, 403, 499, 604, 793, 843
Bsp19I CCATGG 2 cut(s) 340, 363
BspACI CCGC 2 cut(s) 568, 599
BspANI GGCC 1 cut(s) 1072
BspCNI CTCAG 2 cut(s) 498, 739
BspFNI CGCG 1 cut(s) 599
BspLI GGNNCC 4 cut(s) 781, 845, 1072, 1073
BspMAI CTGCAG 1 cut(s) 595
BspPI GGATC 3 cut(s) 599, 838, 851
BspTNI GGTCTC 1 cut(s) 416
BsrDI GCAATG 3 cut(s) 91, 636, 1225
BsrGI TGTACA 2 cut(s) 732, 1338
BsrI ACTGG 1 cut(s) 1173
BssECI CCNNGG 6 cut(s) 340, 363, 680, 1015, 1050, 1101
BssMI GATC 6 cut(s) 105, 403, 499, 604, 793, 843
BssNAI GTATAC 1 cut(s) 1318
BssT1I CCWWGG 4 cut(s) 340, 363, 680, 1050
Bst1107I GTATAC 1 cut(s) 1318
Bst2UI CCWGG 2 cut(s) 1016, 1102
Bst4CI ACNGT 6 cut(s) 612, 698, 1059, 1273, 1281, 1399
Bst6I CTCTTC 2 cut(s) 114, 120
BstAPI GCANNNNNTGC 1 cut(s) 397
BstAUI TGTACA 2 cut(s) 732, 1338
BstC8I GCNNGC 2 cut(s) 360, 591
BstDEI CTNAG 3 cut(s) 42, 506, 747
BstDSI CCRYGG 2 cut(s) 340, 363
BstEII GGTNACC 1 cut(s) 1112
BstF5I GGATG 4 cut(s) 78, 203, 607, 1011
BstFNI CGCG 1 cut(s) 599
BstKTI GATC 6 cut(s) 108, 406, 502, 607, 796, 846
BstMAI GTCTC 3 cut(s) 416, 770, 1270
BstMBI GATC 6 cut(s) 105, 403, 499, 604, 793, 843
BstMWI GCNNNNNNNGC 2 cut(s) 397, 919
BstNI CCWGG 2 cut(s) 1016, 1102
BstPAI GACNNNNGTC 1 cut(s) 471
BstPI GGTNACC 1 cut(s) 1112
BstSCI CCNGG 2 cut(s) 1014, 1100
BstSFI CTRYAG 1 cut(s) 591
BstSLI GKGCMC 2 cut(s) 35, 1074
BstUI CGCG 1 cut(s) 599
BstV1I GCAGC 5 cut(s) 152, 384, 533, 663, 1229
BstV2I GAAGAC 2 cut(s) 471, 1194
BstX2I RGATCY 1 cut(s) 843
BstXI CCANNNNNNTGG 1 cut(s) 1108
BstYI RGATCY 1 cut(s) 843
BstZ17I GTATAC 1 cut(s) 1318
BsuRI GGCC 1 cut(s) 1072
BtgI CCRYGG 2 cut(s) 340, 363
BtgZI GCGATG 2 cut(s) 894, 1030
BtsCI GGATG 4 cut(s) 78, 203, 607, 1011
BtsI GCAGTG 1 cut(s) 517
BtsIMutI CAGTG 4 cut(s) 517, 608, 1064, 1278
Cac8I GCNNGC 2 cut(s) 360, 591
Cfr13I GGNCC 6 cut(s) 329, 780, 1070, 1071, 1399, 1420
CseI GACGC 1 cut(s) 605
Csp6I GTAC 5 cut(s) 252, 385, 719, 733, 1339
CviAII CATG 4 cut(s) 341, 364, 460, 1150
CviQI GTAC 5 cut(s) 252, 385, 719, 733, 1339
DdeI CTNAG 3 cut(s) 42, 506, 747
DpnI GATC 6 cut(s) 107, 405, 501, 606, 795, 845
DpnII GATC 6 cut(s) 105, 403, 499, 604, 793, 843
DraI TTTAAA 1 cut(s) 1179
Eam1104I CTCTTC 2 cut(s) 114, 120
EarI CTCTTC 2 cut(s) 114, 120
Eco130I CCWWGG 4 cut(s) 340, 363, 680, 1050
Eco24I GRGCYC 1 cut(s) 1074
Eco31I GGTCTC 1 cut(s) 416
Eco47I GGWCC 4 cut(s) 329, 780, 1399, 1420
Eco57I CTGAAG 1 cut(s) 902
Eco88I CYCGRG 1 cut(s) 980
Eco91I GGTNACC 1 cut(s) 1112
EcoO109I RGGNCCY 2 cut(s) 1070, 1071
EcoO65I GGTNACC 1 cut(s) 1112
EcoRII CCWGG 2 cut(s) 1014, 1100
EcoT14I CCWWGG 4 cut(s) 340, 363, 680, 1050
EcoT38I GRGCYC 1 cut(s) 1074
ErhI CCWWGG 4 cut(s) 340, 363, 680, 1050
FaeI CATG 4 cut(s) 344, 367, 463, 1153
FaqI GGGAC 2 cut(s) 254, 905
FatI CATG 4 cut(s) 340, 363, 459, 1149
FbaI TGATCA 2 cut(s) 499, 793
FblI GTMKAC 1 cut(s) 1317
Fnu4HI GCNGC 5 cut(s) 141, 398, 547, 677, 1243
FokI GGATG 4 cut(s) 85, 190, 614, 998
FriOI GRGCYC 1 cut(s) 1074
Fsp4HI GCNGC 5 cut(s) 141, 398, 547, 677, 1243
FspBI CTAG 6 cut(s) 228, 249, 312, 665, 800, 1128
GluI GCNGC 5 cut(s) 141, 398, 547, 677, 1243
HaeIII GGCC 1 cut(s) 1072
HgaI GACGC 1 cut(s) 605
Hin1II CATG 4 cut(s) 344, 367, 463, 1153
HincII GTYRAC 2 cut(s) 196, 541
HindII GTYRAC 2 cut(s) 196, 541
HindIII AAGCTT 2 cut(s) 287, 377
HinfI GANTC 5 cut(s) 267, 352, 893, 930, 1064
HphI GGTGA 4 cut(s) 234, 329, 1031, 1124
Hpy166II GTNNAC 4 cut(s) 33, 196, 541, 1318
Hpy188I TCNGA 5 cut(s) 59, 455, 507, 748, 790
Hpy188III TCNNGA 8 cut(s) 50, 419, 476, 557, 692, 769, 800, 841
Hpy8I GTNNAC 4 cut(s) 33, 196, 541, 1318
HpyAV CCTTC 1 cut(s) 985
HpyCH4III ACNGT 6 cut(s) 612, 698, 1059, 1273, 1281, 1399
HpyF10VI GCNNNNNNNGC 2 cut(s) 397, 919
HpyF3I CTNAG 3 cut(s) 42, 506, 747
Hsp92II CATG 4 cut(s) 344, 367, 463, 1153
Ksp22I TGATCA 2 cut(s) 499, 793
Kzo9I GATC 6 cut(s) 105, 403, 499, 604, 793, 843
LmnI GCTCC 1 cut(s) 433
Lsp1109I GCAGC 5 cut(s) 152, 384, 533, 663, 1229
LweI GCATC 3 cut(s) 212, 265, 917
MaeI CTAG 6 cut(s) 228, 249, 312, 665, 800, 1128
MaeIII GTNAC 4 cut(s) 17, 650, 738, 1112
MalI GATC 6 cut(s) 107, 405, 501, 606, 795, 845
MboI GATC 6 cut(s) 105, 403, 499, 604, 793, 843
MboII GAAGA 7 cut(s) 131, 137, 228, 380, 476, 1195, 1199
MfeI CAATTG 2 cut(s) 324, 1374
MflI RGATCY 1 cut(s) 843
MhlI GDGCHC 4 cut(s) 35, 99, 438, 1074
MluCI AATT 9 cut(s) 8, 111, 324, 371, 428, 857, 924, 1086, 1374
MlyI GAGTC 3 cut(s) 276, 887, 939
MmeI TCCRAC 1 cut(s) 730
MseI TTAA 4 cut(s) 114, 375, 1122, 1178
MslI CAYNNNNRTG 2 cut(s) 297, 1354
MspA1I CMGCKG 2 cut(s) 397, 676
MspR9I CCNGG 2 cut(s) 1016, 1102
MssI GTTTAAAC 1 cut(s) 1179
MunI CAATTG 2 cut(s) 324, 1374
Mva1269I GAATGC 1 cut(s) 485
MvaI CCWGG 2 cut(s) 1016, 1102
MvnI CGCG 1 cut(s) 599
MwoI GCNNNNNNNGC 2 cut(s) 397, 919
NcoI CCATGG 2 cut(s) 340, 363
NdeII GATC 6 cut(s) 105, 403, 499, 604, 793, 843
NlaIII CATG 4 cut(s) 344, 367, 463, 1153
NlaIV GGNNCC 4 cut(s) 781, 845, 1072, 1073
NmuCI GTSAC 3 cut(s) 650, 738, 1112
PaeR7I CTCGAG 1 cut(s) 980
PctI GAATGC 1 cut(s) 485
PfeI GAWTC 2 cut(s) 352, 1064
PflFI GACNNNGTC 1 cut(s) 836
PkrI GCNGC 5 cut(s) 142, 399, 548, 678, 1244
PleI GAGTC 3 cut(s) 275, 887, 938
PmeI GTTTAAAC 1 cut(s) 1179
PpsI GAGTC 3 cut(s) 275, 887, 938
PshAI GACNNNNGTC 1 cut(s) 471
PsiI TTATAA 1 cut(s) 1287
Psp6I CCWGG 2 cut(s) 1014, 1100
PspEI GGTNACC 1 cut(s) 1112
PspGI CCWGG 2 cut(s) 1014, 1100
PspN4I GGNNCC 4 cut(s) 781, 845, 1072, 1073
PspOMI GGGCCC 1 cut(s) 1070
PspPI GGNCC 6 cut(s) 329, 780, 1070, 1071, 1399, 1420
PspXI VCTCGAGB 1 cut(s) 980
PstI CTGCAG 1 cut(s) 595
PsuI RGATCY 1 cut(s) 843
PsyI GACNNNGTC 1 cut(s) 836
PvuII CAGCTG 2 cut(s) 397, 676
RsaI GTAC 5 cut(s) 253, 386, 720, 734, 1340
RsaNI GTAC 5 cut(s) 252, 385, 719, 733, 1339
RseI CAYNNNNRTG 2 cut(s) 297, 1354
SaqAI TTAA 4 cut(s) 114, 375, 1122, 1178
SatI GCNGC 5 cut(s) 141, 398, 547, 677, 1243
Sau3AI GATC 6 cut(s) 105, 403, 499, 604, 793, 843
Sau96I GGNCC 6 cut(s) 329, 780, 1070, 1071, 1399, 1420
ScaI AGTACT 1 cut(s) 253
SchI GAGTC 3 cut(s) 276, 887, 939
ScrFI CCNGG 2 cut(s) 1016, 1102
SduI GDGCHC 4 cut(s) 35, 99, 438, 1074
SfaNI GCATC 3 cut(s) 212, 265, 917
SfcI CTRYAG 1 cut(s) 591
Sfr274I CTCGAG 1 cut(s) 980
SinI GGWCC 4 cut(s) 329, 780, 1399, 1420
SlaI CTCGAG 1 cut(s) 980
SmiMI CAYNNNNRTG 2 cut(s) 297, 1354
SmlI CTYRAG 2 cut(s) 419, 980
SmoI CTYRAG 2 cut(s) 419, 980
Sse9I AATT 9 cut(s) 8, 111, 324, 371, 428, 857, 924, 1086, 1374
SsiI CCGC 2 cut(s) 568, 599
SspI AATATT 1 cut(s) 619
SspMI CTAG 6 cut(s) 228, 249, 312, 665, 800, 1128
StyD4I CCNGG 2 cut(s) 1014, 1100
StyI CCWWGG 4 cut(s) 340, 363, 680, 1050
TaaI ACNGT 6 cut(s) 612, 698, 1059, 1273, 1281, 1399
TaqI TCGA 5 cut(s) 38, 108, 167, 406, 981
TaqII GACCGA 1 cut(s) 1408
TasI AATT 9 cut(s) 8, 111, 324, 371, 428, 857, 924, 1086, 1374
TatI WGTACW 3 cut(s) 251, 732, 1338
TfiI GAWTC 2 cut(s) 352, 1064
Tru1I TTAA 4 cut(s) 114, 375, 1122, 1178
Tru9I TTAA 4 cut(s) 114, 375, 1122, 1178
TscAI CASTG 4 cut(s) 517, 615, 1064, 1278
TseFI GTSAC 3 cut(s) 650, 738, 1112
TseI GCWGC 5 cut(s) 140, 397, 546, 676, 1242
Tsp45I GTSAC 3 cut(s) 650, 738, 1112
TspDTI ATGAA 2 cut(s) 504, 1157
TspGWI ACGGA 1 cut(s) 772
TspRI CASTG 4 cut(s) 517, 615, 1064, 1278
Tth111I GACNNNGTC 1 cut(s) 836
VneI GTGCAC 1 cut(s) 31
VpaK11BI GGWCC 4 cut(s) 329, 780, 1399, 1420
XapI RAATTY 2 cut(s) 8, 371
XbaI TCTAGA 1 cut(s) 799
XcmI CCANNNNNNNNNTGG 1 cut(s) 167
XhoI CTCGAG 1 cut(s) 980
XmiI GTMKAC 1 cut(s) 1317
XspI CTAG 6 cut(s) 228, 249, 312, 665, 800, 1128
ZrmI AGTACT 1 cut(s) 253
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.