RLG00000020731

UPF0481 protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000351
Physical Location & Seq
Reverse (-)
68039084 .. 68041332
2249 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000020731

Sequence Viewer

Length: 1488 bp
ATGAACGATACCAACAAAGAGCTAGGCTGCAAGGAGATCAAGCACTCACTTCATCACAGTTCCAGCATCAATTCCCAGCTTTCGACTACGTATCTTGAAGTCAGAAGCAGTTGCAGTATGACAGAGAGCAATGTGAATGAGCACTACTTGATCGAAATTAAAGAAGAGGAAGAGAGTGTGATAGCAGCAAACAATGTGAAAAACCAAACTTCGAGTGGAAATCAAAATAAGGAGAGTGTCAACATAGCATCCTCCATTAGAAGAAAGCTACCTAGCAAAGCACCAACACCACCTAGTACTTGCATATACAGAGTCCCTGATGCACTAAAGAAGCTTCACGAAAAGGATTTTGTTCCTAGTTTAGTTTCAATTGGACCATTTCACCATGGCACAAAGAATCTGCAAGCCATGGAAGAATTTAAGCTTTGGTACTTGCACCAGCTCCTTGATCGAAAACCCAATCCTGAGACCAAATTGGAGCACATTGTTGAAAAAATCAGAAGCGTGGAAGGCTATTGTCGTGAATGCTATAACGAAAAACTTGATCATCTGAGTAGTGAAGCATTTGTAGAAATGATGGTGGTTGACGGTTGCTTTATTCTTGAATACTACCGCAAAAGAATAGGAGAAGTGCCTGCAGACGCGGATGATCCACTGTTCAATATTACTTTAGCAATGTCGCCAACACTTACAAGTGACTTGGTTATGCTAGAAAACCAGCTGCCTTGGAGAGTTCTTGACTGTTTATTCCAACTCACAAAAGTACCTAATGGAATGTACAAGTCACTATCTGAGCTTACTCGCAGTTGTCTCCCGATTCGGGGGCCCGTGTCTGACGATCATCTAGAGCAGACATTGGAAAGCAGACATTTACTTGACAATGTCAGGATCCTTTCTGCTGAATTAGACAAGAAAGAGGAGATTATGCCATTTTGGGACTCTATGCCCTCTGCATCGCAACTTCAGCAAATTGGAGTCATATTTCAACCCAACAGAAATAACATCAACATAAACATAACCTTCCTCGAGGGAGTGATGGAGATTGCACCAATAACCATCCAGGGTGATAATCCTGTCTTTAGAAACCTCATCGCCTTGGAACACTGTGAATCGGGGCCCCATAAGTATCAAATTAGCACTTATGCCAGGGCATTGGGTGACCTTATTAAATCTAGTAAAGATGTGGAGTTTCTCATGGAGAAAGAGATTATTCATACCAGTTTAAACAAGGAAGACATAGCCGGTTTCTTCAACGACATTTGCAATGGTTTTGCAACTTCCTCCTGCTGCAAGTCTTTTTGGCAAGTTTCCTTGACAGTGAGACAGTATTATAAACAACACTGGCTACAAAGATTGATAGTTTACATCAAACATAACTACTTGTACAATCCCTCATCAATATGGTCAGTTTCTAATGCAGTCGTCCTTATTATAATTCTTACGGTTCTGCAAACCGTATATTCGGTCCTCTCTTACTACAAGTCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

496

Amino Acids

56.63

Weight (kDa)

5.96

Isoelectric Point (pI)

53.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 102 - 478 3.4e-91 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000351)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g16420 FvH4_6g39730
malus_domestica MD02G1081100.v1.1 MD02G1081200.v1.1 MD09G1249600.v1.1 MD09G1250500.v1.1 MD09G1250900.v1.1 MD15G1081900.v1.1 MD15G1208800.v1.1 MD17G1242700.v1.1 MD17G1242800.v1.1 MD17G1242900.v1.1 MD17G1243200.v1.1
prunus_persica Prupe.3G130000_v2.0.a1 Prupe.3G130100_v2.0.a1 Prupe.3G130300_v2.0.a1 Prupe.3G130400_v2.0.a1 Prupe.3G130400_v2.0.a1 Prupe.3G130400_v2.0.a1 Prupe.3G130500_v2.0.a1 Prupe.3G136500_v2.0.a1 Prupe.3G141700_v2.0.a1 Prupe.3G141800_v2.0.a1 Prupe.3G141900_v2.0.a1 Prupe.3G155700_v2.0.a1 Prupe.7G207700_v2.0.a1 Prupe.7G207800_v2.0.a1 Prupe.7G207900_v2.0.a1 Prupe.7G207900_v2.0.a1 Prupe.7G208100_v2.0.a1 Prupe.7G208100_v2.0.a1 Prupe.7G208100_v2.0.a1 Prupe.7G208100_v2.0.a1
pyrus_communis pycom09g16640 pycom09g16690 pycom15g07650 pycom17g24550 pycom17g24560 pycom17g24570 pycom17g24670
rosa_chinensis RchiOBHm_Chr2g0153821 RchiOBHm_Chr2g0163501 RchiOBHm_Chr2g0163511 RchiOBHm_Chr2g0163521 RchiOBHm_Chr5g0063201 RchiOBHm_Chr7g0229231 RchiOBHm_Chr7g0229251
rosa_laevigata RLG00000001520 RLG00000020727 RLG00000020731 RLG00000021394 RLG00000022074 RLG00000023249
rosa_multiflora Rmu_sc0000235.1_g000044 Rmu_sc0000693.1_g000020 Rmu_sc0000693.1_g000032 Rmu_sc0002053.1_g000010 Rmu_sc0002053.1_g000011 Rmu_sc0003887.1_g000020 Rmu_sc0004278.1_g000001 Rmu_sc0012759.1_g000001
rosa_roxburghii Rroxscaffold_2G00087170 Rroxscaffold_2G00087180 Rroxscaffold_2G00087190 Rroxscaffold_2G00087230 Rroxscaffold_2G00087250 Rroxscaffold_2G00087320 Rroxscaffold_2G00094720 Rroxscaffold_3G00230450 Rroxscaffold_3G00230460
rosa_rugosa Rorug02G0442300.1 Rorug02G0442400 Rorug02G0503400 Rorug02G0503500 Rorug02G0560600 Rorug05G0355000 Rorug05G0355100 Rorug07G0258000
rosa_samantha Rh2AG185500 Rh2AG506100 Rh2AG506200 Rh2AG570300 Rh2AG570400 Rh2BG515600 Rh2BG582500 Rh2BG582600 Rh2BG582700 Rh2CG491600 Rh2CG491700 Rh2CG552300 Rh2CG552400 Rh2CG617700 Rh2CG617800 Rh2DG528100 Rh2DG592200 Rh2DG592300 Rh2DG592400 Rh2DG665500 Rh5CG234300 Rh5DG460600 Rh7AG407800 Rh7BG387600 Rh7CG426800 Rh7CG427000 Rh7DG402900
rosa_wichuraiana Rw0G001890 Rw2G041540 Rw2G047220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1332, 1433
AbsI CCTCGAGG 1 cut(s) 1025
AccII CGCG 1 cut(s) 644
AciI CCGC 2 cut(s) 613, 644
AclWI GGATC 3 cut(s) 644, 883, 896
AcsI RAATTY 1 cut(s) 416
AcuI CTGAAG 1 cut(s) 947
AfaI GTAC 5 cut(s) 298, 431, 765, 779, 1385
AfiI CCNNNNNNNGG 2 cut(s) 820, 821
AgsI TTSAA 7 cut(s) 98, 369, 491, 605, 661, 986, 1252
AjnI CCWGG 2 cut(s) 1059, 1145
AluBI AGCT 8 cut(s) 22, 79, 268, 334, 424, 442, 721, 796
AluI AGCT 8 cut(s) 22, 79, 268, 334, 424, 442, 721, 796
Alw21I GWGCWC 2 cut(s) 144, 483
Alw26I GTCTC 3 cut(s) 461, 815, 1315
AlwI GGATC 3 cut(s) 644, 883, 896
Ama87I CYCGRG 1 cut(s) 1025
AoxI GGCC 2 cut(s) 824, 1115
ApaI GGGCCC 2 cut(s) 828, 1119
ApeKI GCWGC 4 cut(s) 27, 185, 721, 1287
ApoI RAATTY 1 cut(s) 416
AspS9I GGNCC 6 cut(s) 374, 824, 825, 1115, 1116, 1465
AsuHPI GGTGA 3 cut(s) 374, 1076, 1169
AvaI CYCGRG 1 cut(s) 1025
AvaII GGWCC 2 cut(s) 374, 1465
BaeGI GKGCMC 2 cut(s) 828, 1119
BaeI ACNNNNGTAYC 2 cut(s) 747, 780
BamHI GGATCC 1 cut(s) 888
BanII GRGCYC 2 cut(s) 828, 1119
BbsI GAAGAC 1 cut(s) 1239
Bbv12I GWGCWC 2 cut(s) 144, 483
BbvI GCAGC 4 cut(s) 14, 197, 708, 1274
BccI CCATC 3 cut(s) 571, 1030, 1064
BciT130I CCWGG 2 cut(s) 1061, 1147
BclI TGATCA 1 cut(s) 544
BcoDI GTCTC 3 cut(s) 461, 815, 1315
BfaI CTAG 7 cut(s) 23, 273, 294, 357, 710, 845, 1173
BfmI CTRYAG 1 cut(s) 636
BisI GCNGC 4 cut(s) 28, 186, 722, 1288
BlsI GCNGC 4 cut(s) 29, 187, 723, 1289
BmcAI AGTACT 1 cut(s) 298
Bme1390I CCNGG 2 cut(s) 1061, 1147
Bme18I GGWCC 2 cut(s) 374, 1465
BmeT110I CYCGRG 1 cut(s) 1025
BmgT120I GGNCC 6 cut(s) 374, 824, 825, 1115, 1116, 1465
BmiI GGNNCC 6 cut(s) 825, 826, 890, 1116, 1117, 1118
BmrFI CCNGG 2 cut(s) 1061, 1147
BmsI GCATC 4 cut(s) 75, 257, 310, 962
BpiI GAAGAC 1 cut(s) 1239
BsaAI YACGTR 1 cut(s) 90
BsaI GGTCTC 1 cut(s) 461
BsaJI CCNNGG 6 cut(s) 385, 408, 725, 1060, 1095, 1146
Bsc4I CCNNNNNNNGG 2 cut(s) 820, 821
Bse118I RCCGGY 1 cut(s) 1241
Bse1I ACTGG 2 cut(s) 1218, 1346
Bse3DI GCAATG 3 cut(s) 136, 681, 1270
BseBI CCWGG 2 cut(s) 1061, 1147
BseDI CCNNGG 6 cut(s) 385, 408, 725, 1060, 1095, 1146
BseGI GGATG 3 cut(s) 248, 652, 1056
BseLI CCNNNNNNNGG 2 cut(s) 820, 821
BseMI GCAATG 3 cut(s) 136, 681, 1270
BseMII CTCAG 3 cut(s) 456, 542, 783
BseNI ACTGG 2 cut(s) 1218, 1346
BseRI GAGGAG 1 cut(s) 932
BseSI GKGCMC 2 cut(s) 828, 1119
BseXI GCAGC 4 cut(s) 14, 197, 708, 1274
BseYI CCCAGC 1 cut(s) 75
Bsh1236I CGCG 1 cut(s) 644
BshFI GGCC 2 cut(s) 826, 1117
BsiHKAI GWGCWC 2 cut(s) 144, 483
BsiHKCI CYCGRG 1 cut(s) 1025
BsiSI CCGG 1 cut(s) 1242
BslFI GGGAC 2 cut(s) 299, 950
BslI CCNNNNNNNGG 2 cut(s) 820, 821
BsmAI GTCTC 3 cut(s) 461, 815, 1315
BsmFI GGGAC 2 cut(s) 299, 950
BsmI GAATGC 1 cut(s) 530
BsnI GGCC 2 cut(s) 826, 1117
Bso31I GGTCTC 1 cut(s) 461
BsoBI CYCGRG 1 cut(s) 1025
Bsp120I GGGCCC 2 cut(s) 824, 1115
Bsp1286I GDGCHC 4 cut(s) 144, 483, 828, 1119
Bsp1407I TGTACA 2 cut(s) 777, 1383
Bsp143I GATC 7 cut(s) 36, 150, 448, 544, 649, 838, 888
Bsp19I CCATGG 2 cut(s) 385, 408
BspACI CCGC 2 cut(s) 613, 644
BspANI GGCC 2 cut(s) 826, 1117
BspCNI CTCAG 3 cut(s) 457, 543, 784
BspFNI CGCG 1 cut(s) 644
BspLI GGNNCC 6 cut(s) 825, 826, 890, 1116, 1117, 1118
BspMAI CTGCAG 1 cut(s) 640
BspPI GGATC 3 cut(s) 644, 883, 896
BspTNI GGTCTC 1 cut(s) 461
BsrDI GCAATG 3 cut(s) 136, 681, 1270
BsrFI RCCGGY 1 cut(s) 1241
BsrGI TGTACA 2 cut(s) 777, 1383
BsrI ACTGG 2 cut(s) 1218, 1346
BssAI RCCGGY 1 cut(s) 1241
BssECI CCNNGG 6 cut(s) 385, 408, 725, 1060, 1095, 1146
BssMI GATC 7 cut(s) 36, 150, 448, 544, 649, 838, 888
BssT1I CCWWGG 4 cut(s) 385, 408, 725, 1095
Bst2UI CCWGG 2 cut(s) 1061, 1147
Bst4CI ACNGT 9 cut(s) 59, 590, 657, 743, 1106, 1318, 1326, 1444, 1456
Bst6I CTCTTC 2 cut(s) 159, 165
BstAUI TGTACA 2 cut(s) 777, 1383
BstBAI YACGTR 1 cut(s) 90
BstC8I GCNNGC 2 cut(s) 405, 636
BstDEI CTNAG 3 cut(s) 465, 551, 792
BstDSI CCRYGG 2 cut(s) 385, 408
BstEII GGTNACC 1 cut(s) 1157
BstF5I GGATG 3 cut(s) 248, 652, 1056
BstFNI CGCG 1 cut(s) 644
BstKTI GATC 7 cut(s) 39, 153, 451, 547, 652, 841, 891
BstMAI GTCTC 3 cut(s) 461, 815, 1315
BstMBI GATC 7 cut(s) 36, 150, 448, 544, 649, 838, 888
BstMWI GCNNNNNNNGC 2 cut(s) 510, 964
BstNI CCWGG 2 cut(s) 1061, 1147
BstPI GGTNACC 1 cut(s) 1157
BstSCI CCNGG 2 cut(s) 1059, 1145
BstSFI CTRYAG 1 cut(s) 636
BstSLI GKGCMC 2 cut(s) 828, 1119
BstSNI TACGTA 1 cut(s) 90
BstUI CGCG 1 cut(s) 644
BstV1I GCAGC 4 cut(s) 14, 197, 708, 1274
BstV2I GAAGAC 1 cut(s) 1239
BstX2I RGATCY 1 cut(s) 888
BstXI CCANNNNNNTGG 1 cut(s) 1153
BstYI RGATCY 1 cut(s) 888
BsuRI GGCC 2 cut(s) 826, 1117
BtgI CCRYGG 2 cut(s) 385, 408
BtgZI GCGATG 2 cut(s) 939, 1075
BtsCI GGATG 3 cut(s) 248, 652, 1056
BtsIMutI CAGTG 4 cut(s) 653, 1102, 1323, 1339
Cac8I GCNNGC 2 cut(s) 405, 636
Cfr10I RCCGGY 1 cut(s) 1241
Cfr13I GGNCC 6 cut(s) 374, 824, 825, 1115, 1116, 1465
CseI GACGC 1 cut(s) 650
Csp6I GTAC 5 cut(s) 297, 430, 764, 778, 1384
CviAII CATG 3 cut(s) 386, 409, 1195
CviQI GTAC 5 cut(s) 297, 430, 764, 778, 1384
DdeI CTNAG 3 cut(s) 465, 551, 792
DpnI GATC 7 cut(s) 38, 152, 450, 546, 651, 840, 890
DpnII GATC 7 cut(s) 36, 150, 448, 544, 649, 838, 888
DraI TTTAAA 1 cut(s) 1224
Eam1104I CTCTTC 2 cut(s) 159, 165
EarI CTCTTC 2 cut(s) 159, 165
Eco105I TACGTA 1 cut(s) 90
Eco130I CCWWGG 4 cut(s) 385, 408, 725, 1095
Eco24I GRGCYC 2 cut(s) 828, 1119
Eco31I GGTCTC 1 cut(s) 461
Eco47I GGWCC 2 cut(s) 374, 1465
Eco57I CTGAAG 1 cut(s) 947
Eco88I CYCGRG 1 cut(s) 1025
Eco91I GGTNACC 1 cut(s) 1157
EcoO109I RGGNCCY 3 cut(s) 824, 1115, 1116
EcoO65I GGTNACC 1 cut(s) 1157
EcoRII CCWGG 2 cut(s) 1059, 1145
EcoT14I CCWWGG 4 cut(s) 385, 408, 725, 1095
EcoT38I GRGCYC 2 cut(s) 828, 1119
ErhI CCWWGG 4 cut(s) 385, 408, 725, 1095
FaeI CATG 3 cut(s) 389, 412, 1198
FaqI GGGAC 2 cut(s) 299, 950
FatI CATG 3 cut(s) 385, 408, 1194
FbaI TGATCA 1 cut(s) 544
Fnu4HI GCNGC 4 cut(s) 28, 186, 722, 1288
FokI GGATG 3 cut(s) 235, 659, 1043
FriOI GRGCYC 2 cut(s) 828, 1119
Fsp4HI GCNGC 4 cut(s) 28, 186, 722, 1288
FspBI CTAG 7 cut(s) 23, 273, 294, 357, 710, 845, 1173
GluI GCNGC 4 cut(s) 28, 186, 722, 1288
GsaI CCCAGC 1 cut(s) 79
HaeIII GGCC 2 cut(s) 826, 1117
HapII CCGG 1 cut(s) 1242
HgaI GACGC 1 cut(s) 650
Hin1II CATG 3 cut(s) 389, 412, 1198
HincII GTYRAC 2 cut(s) 241, 586
HindII GTYRAC 2 cut(s) 241, 586
HindIII AAGCTT 2 cut(s) 332, 422
HinfI GANTC 6 cut(s) 312, 397, 817, 938, 975, 1109
HpaII CCGG 1 cut(s) 1242
HphI GGTGA 3 cut(s) 374, 1076, 1169
Hpy166II GTNNAC 3 cut(s) 241, 586, 1363
Hpy188I TCNGA 5 cut(s) 104, 500, 552, 793, 835
Hpy188III TCNNGA 9 cut(s) 95, 338, 464, 521, 602, 737, 814, 845, 886
Hpy8I GTNNAC 3 cut(s) 241, 586, 1363
HpyAV CCTTC 2 cut(s) 503, 1030
HpyCH4III ACNGT 9 cut(s) 59, 590, 657, 743, 1106, 1318, 1326, 1444, 1456
HpyCH4IV ACGT 1 cut(s) 89
HpyF10VI GCNNNNNNNGC 2 cut(s) 510, 964
HpyF3I CTNAG 3 cut(s) 465, 551, 792
HpySE526I ACGT 1 cut(s) 89
Hsp92II CATG 3 cut(s) 389, 412, 1198
Ksp22I TGATCA 1 cut(s) 544
Kzo9I GATC 7 cut(s) 36, 150, 448, 544, 649, 838, 888
LmnI GCTCC 2 cut(s) 447, 478
Lsp1109I GCAGC 4 cut(s) 14, 197, 708, 1274
LweI GCATC 4 cut(s) 75, 257, 310, 962
MaeI CTAG 7 cut(s) 23, 273, 294, 357, 710, 845, 1173
MaeII ACGT 1 cut(s) 89
MaeIII GTNAC 3 cut(s) 695, 783, 1157
MalI GATC 7 cut(s) 38, 152, 450, 546, 651, 840, 890
MboI GATC 7 cut(s) 36, 150, 448, 544, 649, 838, 888
MboII GAAGA 6 cut(s) 176, 182, 273, 425, 1240, 1244
MfeI CAATTG 1 cut(s) 369
MflI RGATCY 1 cut(s) 888
MhlI GDGCHC 4 cut(s) 144, 483, 828, 1119
MluCI AATT 9 cut(s) 70, 156, 369, 416, 473, 902, 969, 1131, 1434
MlyI GAGTC 3 cut(s) 321, 932, 984
MmeI TCCRAC 1 cut(s) 775
MseI TTAA 4 cut(s) 159, 420, 1167, 1223
MslI CAYNNNNRTG 1 cut(s) 1399
MspA1I CMGCKG 1 cut(s) 721
MspI CCGG 1 cut(s) 1242
MspR9I CCNGG 2 cut(s) 1061, 1147
MssI GTTTAAAC 1 cut(s) 1224
MunI CAATTG 1 cut(s) 369
Mva1269I GAATGC 1 cut(s) 530
MvaI CCWGG 2 cut(s) 1061, 1147
MvnI CGCG 1 cut(s) 644
MwoI GCNNNNNNNGC 2 cut(s) 510, 964
NcoI CCATGG 2 cut(s) 385, 408
NdeII GATC 7 cut(s) 36, 150, 448, 544, 649, 838, 888
NlaIII CATG 3 cut(s) 389, 412, 1198
NlaIV GGNNCC 6 cut(s) 825, 826, 890, 1116, 1117, 1118
NmuCI GTSAC 3 cut(s) 695, 783, 1157
PaeR7I CTCGAG 1 cut(s) 1025
PctI GAATGC 1 cut(s) 530
PfeI GAWTC 3 cut(s) 397, 817, 1109
PflFI GACNNNGTC 1 cut(s) 881
PkrI GCNGC 4 cut(s) 29, 187, 723, 1289
PleI GAGTC 3 cut(s) 320, 932, 983
PmeI GTTTAAAC 1 cut(s) 1224
PpsI GAGTC 3 cut(s) 320, 932, 983
Ppu21I YACGTR 1 cut(s) 90
PsiI TTATAA 2 cut(s) 1332, 1433
Psp6I CCWGG 2 cut(s) 1059, 1145
PspEI GGTNACC 1 cut(s) 1157
PspFI CCCAGC 1 cut(s) 75
PspGI CCWGG 2 cut(s) 1059, 1145
PspN4I GGNNCC 6 cut(s) 825, 826, 890, 1116, 1117, 1118
PspOMI GGGCCC 2 cut(s) 824, 1115
PspPI GGNCC 6 cut(s) 374, 824, 825, 1115, 1116, 1465
PspXI VCTCGAGB 1 cut(s) 1025
PstI CTGCAG 1 cut(s) 640
PsuI RGATCY 1 cut(s) 888
PsyI GACNNNGTC 1 cut(s) 881
PvuII CAGCTG 1 cut(s) 721
RsaI GTAC 5 cut(s) 298, 431, 765, 779, 1385
RsaNI GTAC 5 cut(s) 297, 430, 764, 778, 1384
RseI CAYNNNNRTG 1 cut(s) 1399
SaqAI TTAA 4 cut(s) 159, 420, 1167, 1223
SatI GCNGC 4 cut(s) 28, 186, 722, 1288
Sau3AI GATC 7 cut(s) 36, 150, 448, 544, 649, 838, 888
Sau96I GGNCC 6 cut(s) 374, 824, 825, 1115, 1116, 1465
ScaI AGTACT 1 cut(s) 298
SchI GAGTC 3 cut(s) 321, 932, 984
ScrFI CCNGG 2 cut(s) 1061, 1147
SduI GDGCHC 4 cut(s) 144, 483, 828, 1119
SfaNI GCATC 4 cut(s) 75, 257, 310, 962
SfcI CTRYAG 1 cut(s) 636
Sfr274I CTCGAG 1 cut(s) 1025
SinI GGWCC 2 cut(s) 374, 1465
SlaI CTCGAG 1 cut(s) 1025
SmiMI CAYNNNNRTG 1 cut(s) 1399
SmlI CTYRAG 1 cut(s) 1025
SmoI CTYRAG 1 cut(s) 1025
SnaBI TACGTA 1 cut(s) 90
Sse9I AATT 9 cut(s) 70, 156, 369, 416, 473, 902, 969, 1131, 1434
SsiI CCGC 2 cut(s) 613, 644
SspI AATATT 1 cut(s) 664
SspMI CTAG 7 cut(s) 23, 273, 294, 357, 710, 845, 1173
StyD4I CCNGG 2 cut(s) 1059, 1145
StyI CCWWGG 4 cut(s) 385, 408, 725, 1095
TaaI ACNGT 9 cut(s) 59, 590, 657, 743, 1106, 1318, 1326, 1444, 1456
TaiI ACGT 1 cut(s) 92
TaqI TCGA 5 cut(s) 83, 153, 212, 451, 1026
TaqII GACCGA 1 cut(s) 1453
TasI AATT 9 cut(s) 70, 156, 369, 416, 473, 902, 969, 1131, 1434
TatI WGTACW 3 cut(s) 296, 777, 1383
TfiI GAWTC 3 cut(s) 397, 817, 1109
Tru1I TTAA 4 cut(s) 159, 420, 1167, 1223
Tru9I TTAA 4 cut(s) 159, 420, 1167, 1223
TscAI CASTG 4 cut(s) 660, 1109, 1323, 1346
TseFI GTSAC 3 cut(s) 695, 783, 1157
TseI GCWGC 4 cut(s) 27, 185, 721, 1287
Tsp45I GTSAC 3 cut(s) 695, 783, 1157
TspDTI ATGAA 3 cut(s) 17, 41, 1202
TspRI CASTG 4 cut(s) 660, 1109, 1323, 1346
Tth111I GACNNNGTC 1 cut(s) 881
VpaK11BI GGWCC 2 cut(s) 374, 1465
XapI RAATTY 1 cut(s) 416
XbaI TCTAGA 1 cut(s) 844
XcmI CCANNNNNNNNNTGG 1 cut(s) 212
XhoI CTCGAG 1 cut(s) 1025
XspI CTAG 7 cut(s) 23, 273, 294, 357, 710, 845, 1173
ZrmI AGTACT 1 cut(s) 298
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.