pycom11g18100

metal ion binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0000343
Physical Location & Seq
Forward (+)
20346361 .. 20353944
7584 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1881 bp
ATGTTGGATTTGCAGGACATTCAATATGCCAAAATGCTCGGATTTATGGATGAGGATATGATTAGTGACGCAGAAGATGACTCAGTTGACATTGATAGCATATTTGGCTATGTCTGTTGTATATGCGATGATGGTGGCGATCTCTTGTGCTGTGAAGGGAGGTGCCTTAGGTCCTTTCATGCGACTGTAGAGGCTGGAGTGGGATCTGGTTGCAGATCTCTCGGCTTTATGCGGGGTGCTGTCGATGTGATGTCAACTTTCTTATGCAAGAACTGTAAATTTAAACAACATCAGTGCTATGCTTGTGGGGAGTTAGGGTCCTCTGATAAATCTTCGGGTGCCAAGGTTTTTCCCTGTGCTTCCGCGATTTGTGGTCGTTTTTACCATCCTCGATGTGTTGCAAAGTTACTTTGTCAAAATAATAGAGAATCTGCTGAAGAACTTGAAGAAAAGATTTCTCTGGGGGATTATTTTACATGTCCAGTTCACAAGTGCAGCGTTTGTCAAGAAGGGGAGAATAAGAAGGTCCATGAATTGCAGTTGGCTGTGTGCATGCGTTGCCCTCAATCGTACCATAGGAAATGCTTGCCAAGGGAGATTGCTTTTGAGGAGAAGGGTGGAAAATTTGGAGAAGGGAGATCAATACAAAGAGCCTGGGATGATCTACTTCCAAACCGCATACTAATATATTGCACGAAGCATGCGATAAACAGCTACACTGGATCTGCAGCAAGGGACCACATAAAATTTCCCGAATTTGAAGAGAGGAAGAGAAAACAGGCATTAGAGGAGCTTGTAGCTAGAAGGAAAGCTCCATCTAAATCAAGAAATGATTACCATGAAGAGTTGTGTAGGGGGAGAACTGTTCCCACGGTATCCAAACCAAAGCAAAAACCAGTATCTAAACAGGAGCAAATACCATCTTTTTCTGTGAATCATGAGAATCCAGATGTACTTAGTGTTGATTCAGAGAGGAGAGTATTGGATCTAATGGAAAAAGCTGCATCTTCATTAACTCTGGAAGATGTTATACGTAAGCACCCAATTCCAACAACTCATGCATACTCATCAAAGTTTTTTGTGAACAAGAAGATGTTATTAGGAAAGGTGGAAGGCTCGACTGAGGCTGTTCGAACAGCCTTACAAAAACTAGAGAACGGGTGCAGCACTGAAGATGCAGAAGCTGTCTGCGAGCGTGATGTTCTTAACCAGATTTTTATGTGGAAGAAGAAGCTGCATGTTTATCTCGCTCCATTTCTTAATGCCACGCGCTACACATCCTTTGGCCGCCATTTTACCAAGGTGAAGAAACTGGAACAGATTGTCGATAGGCTCCATTGGTATGTTCAGCCTGGAGATATGATAGTGGACTTCAGTTGTGGTTCCAATGACTTCAGTATCCTAATGAGCAAAAAGCTTGAACAGACAGGGAAGAACTGCTTGTATAAAAACTATGACTTGTTTCAGCCAGAGAACGATTTTAATTTTGAGAAGAAGGATTGGATGACTGTCAAAAGGGAGGAGTTACAGAAAGGGGCGCCATTGATCATTGGACTGAACCCTCCTTTTGGAGTCAAAGCAGCTTTGGCGAACAAGTTCATTGACAAGGCTCTTGAATTTGAGCCAAAGCTCCTCATTCTTATTGTTCCACCAGAAACACAAAGGTTGGATAGAAAGAAATCACCCTATGAGCTGATTTGGGAGGATGATCGGTTATTATCTGGAAAGTCATTTTATCTTCCTGGATCGGTCGACGTGGATAACAAACAAATCGATCAGTGGAATTTGATATCGCCGCCACTTTATCTTTGGAGTCGTCGTGATCGAGCTGCTGAGCACAAGGCCATAGCTCAAAAGCACGGCCACTCCTTTGGAAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006325 GO:0006355 GO:0006950 GO:0006952 GO:0006996 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0009605 GO:0009607 GO:0009620 GO:0009791 GO:0009889 GO:0009893 GO:0009909 GO:0009911 GO:0009987 GO:0010228 GO:0010468 GO:0010556 GO:0010604 GO:0010638 GO:0016043 GO:0019219 GO:0019222 GO:0022414 GO:0023052 GO:0030154 GO:0031056 GO:0031058 GO:0031060 GO:0031062 GO:0031323 GO:0031325 GO:0031326 GO:0031399 GO:0031401 GO:0031440 GO:0031935 GO:0031937 GO:0032268 GO:0032270 GO:0032501 GO:0032502 GO:0033043 GO:0033044 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0043954 GO:0044030 GO:0044424 GO:0044464 GO:0048366 GO:0048367 GO:0048468 GO:0048518 GO:0048522 GO:0048580 GO:0048582 GO:0048608 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0048869 GO:0050684 GO:0050789 GO:0050793 GO:0050794 GO:0050832 GO:0050896 GO:0051052 GO:0051094 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051239 GO:0051240 GO:0051246 GO:0051247 GO:0051252 GO:0051276 GO:0051570 GO:0051574 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0060968 GO:0061085 GO:0061087 GO:0061458 GO:0065007 GO:0070827 GO:0070828 GO:0070829 GO:0071840 GO:0080090 GO:0090436 GO:0097159 GO:0098542 GO:0099402 GO:0140110 GO:1900109 GO:1900111 GO:1900363 GO:1901363 GO:1902275 GO:1903311 GO:1903506 GO:1905269 GO:2000024 GO:2000026 GO:2000112 GO:2000241 GO:2000243 GO:2001141 GO:2001252
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DNMT1-RFD

Protein Analysis

627

Amino Acids

71.33

Weight (kDa)

8.13

Isoelectric Point (pI)

45.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PHD_NSD PF22908 95 - 163 2.7e-18 Histone-lysine N-methyltransferase NSD-like, PHD zinc finger
PHDvar_NSD PF23004 165 - 201 3.3e-06 Histone-lysine N-methyltransferase NSD-like, variant PHD zinc finger
Mtase_EDM2 PF26055 448 - 618 7.2e-89 EDM2 methyltransferase-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000343)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48090 AT5G48090 AT5G48090 AT5G55390 AT5G55390 AT5G55390
fragaria_vesca FvH4_3g23690 FvH4_4g08730 FvH4_4g08730 FvH4_4g08730 FvH4_4g08730 FvH4_4g08730 FvH4_4g08730 FvH4_5g31160 FvH4_5g31160 FvH4_5g31160 FvH4_5g31160 FvH4_5g31160
malus_domestica MD03G1191000.v1.1 MD11G1207800.v1.1 MD11G1208000.v1.1
prunus_persica Prupe.4G227500_v2.0.a1 Prupe.4G227500_v2.0.a1 Prupe.4G227500_v2.0.a1 Prupe.4G227500_v2.0.a1 Prupe.4G227500_v2.0.a1 Prupe.4G227500_v2.0.a1 Prupe.4G227600_v2.0.a1 Prupe.4G227700_v2.0.a1 Prupe.4G227800_v2.0.a1 Prupe.4G227800_v2.0.a1 Prupe.4G227800_v2.0.a1 Prupe.4G227800_v2.0.a1 Prupe.4G227800_v2.0.a1
pyrus_communis pycom01g03400 pycom03g14420 pycom11g18100 pycom11g18140 pycom11g18150 pycom11g18160
rosa_chinensis RchiOBHm_Chr2g0145981 RchiOBHm_Chr4g0405241 RchiOBHm_Chr4g0405271 RchiOBHm_Chr5g0016201 RchiOBHm_Chr5g0041831 RchiOBHm_Chr5g0041871 RchiOBHm_Chr5g0041881 RchiOBHm_Chr5g0059241
rosa_laevigata RLG00000002117 RLG00000008861 RLG00000008862 RLG00000011000 RLG00000033216 RLG00000034097 RLG00000034101
rosa_multiflora Rmu_sc0000161.1_g000001 Rmu_sc0000861.1_g000040 Rmu_sc0007522.1_g000003 Rmu_sc0009443.1_g000015 Rmu_sc0022129.1_g000001 Rmu_sc0042315.1_g000001
rosa_roxburghii Rroxscaffold_1G00038660 Rroxscaffold_1G00038690 Rroxscaffold_5G00349560 Rroxscaffold_5G00349610 Rroxscaffold_6G00388370 Rroxscaffold_7G00188740
rosa_rugosa Rorug03G0199700 Rorug04G0055400 Rorug04G0055500 Rorug04G0055900 Rorug04G0056000 Rorug04G0056100 Rorug04G0056100 Rorug04G0056200 Rorug05G0195600 Rorug05G0195700 Rorug05G0195800 Rorug05G0195900 Rorug05G0196800 Rorug05G0385000
rosa_samantha Rh4AG129900 Rh4AG130100 Rh4BG124200 Rh4BG124400 Rh4BG124500 Rh4CG137200 Rh4CG137300 Rh4DG123500 Rh4DG123700 Rh5AG280800 Rh5AG281400 Rh5BG286700 Rh5BG287000 Rh5BG397800 Rh5CG318100 Rh5CG318600 Rh5CG421600 Rh5DG132300 Rh5DG132400 Rh5DG295400 Rh5DG295700 Rh7BG475300
rosa_wichuraiana Rw0G001330 Rw0G005730 Rw4G008670 Rw4G010510 Rw4G010540 Rw5G026450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 162, 338, 1537
AccI GTMKAC 1 cut(s) 1752
AccII CGCG 2 cut(s) 365, 1270
AciI CCGC 5 cut(s) 232, 363, 676, 1288, 1796
AclWI GGATC 4 cut(s) 211, 730, 993, 1753
AcoI YGGCCR 2 cut(s) 1285, 1861
AcsI RAATTY 6 cut(s) 278, 623, 746, 755, 1616, 1783
AcuI CTGAAG 4 cut(s) 456, 1191, 1357, 1378
AcyI GRCGYC 1 cut(s) 1538
AfaI GTAC 2 cut(s) 572, 954
AfiI CCNNNNNNNGG 1 cut(s) 1568
AflIII ACRYGT 1 cut(s) 476
AgsI TTSAA 5 cut(s) 23, 446, 761, 1421, 1616
AjiI CACGTC 1 cut(s) 1756
AjnI CCWGG 3 cut(s) 653, 1351, 1741
Alw21I GWGCWC 1 cut(s) 1839
AlwI GGATC 4 cut(s) 211, 730, 993, 1753
AlwNI CAGNNNCTG 1 cut(s) 1184
AoxI GGCC 3 cut(s) 1285, 1842, 1861
ApeKI GCWGC 7 cut(s) 495, 728, 1001, 1164, 1234, 1580, 1829
ApoI RAATTY 6 cut(s) 278, 623, 746, 755, 1616, 1783
Asp700I GAANNNNTTC 1 cut(s) 1595
AspLEI GCGC 2 cut(s) 1272, 1540
AspS9I GGNCC 4 cut(s) 171, 318, 526, 736
AsuHPI GGTGA 2 cut(s) 1315, 1674
AsuII TTCGAA 1 cut(s) 1132
AvaII GGWCC 4 cut(s) 171, 318, 526, 736
AxyI CCTNAGG 1 cut(s) 167
BaeI ACNNNNGTAYC 2 cut(s) 1381, 1414
BanI GGYRCC 3 cut(s) 162, 338, 1537
BarI GAAGNNNNNNTAC 2 cut(s) 1014, 1046
Bbv12I GWGCWC 1 cut(s) 1839
BbvI GCAGC 7 cut(s) 507, 740, 988, 1176, 1221, 1592, 1816
BccI CCATC 4 cut(s) 125, 393, 823, 928
BceAI ACGGC 1 cut(s) 1876
BcgI CGANNNNNNTGC 2 cut(s) 202, 236
BciT130I CCWGG 3 cut(s) 655, 1353, 1743
BciVI GTATCC 2 cut(s) 886, 1409
BclI TGATCA 1 cut(s) 1545
BfaI CTAG 2 cut(s) 801, 1151
BfmI CTRYAG 2 cut(s) 186, 726
BfoI RGCGCY 1 cut(s) 1541
BfuI GTATCC 2 cut(s) 886, 1409
BglII AGATCT 1 cut(s) 215
BisI GCNGC 9 cut(s) 496, 729, 1002, 1165, 1235, 1288, 1581, 1796, 1830
BlpI GCTNAGC 1 cut(s) 1833
BlsI GCNGC 9 cut(s) 497, 730, 1003, 1166, 1236, 1289, 1582, 1797, 1831
Bme1390I CCNGG 3 cut(s) 655, 1353, 1743
Bme18I GGWCC 4 cut(s) 171, 318, 526, 736
BmgBI CACGTC 1 cut(s) 1756
BmgT120I GGNCC 4 cut(s) 171, 318, 526, 736
BmiI GGNNCC 7 cut(s) 164, 319, 340, 737, 1334, 1384, 1539
BmrFI CCNGG 3 cut(s) 655, 1353, 1743
BmsI GCATC 2 cut(s) 1013, 1165
BpmI CTGGAG 2 cut(s) 216, 1374
Bpu1102I GCTNAGC 1 cut(s) 1833
Bpu14I TTCGAA 1 cut(s) 1132
Bsa29I ATCGAT 1 cut(s) 1773
BsaAI YACGTR 1 cut(s) 1034
BsaHI GRCGYC 1 cut(s) 1538
BsaJI CCNNGG 5 cut(s) 342, 590, 654, 870, 1299
BsaXI ACNNNNNCTCC 6 cut(s) 302, 332, 1804, 1834, 1850, 1880
Bsc4I CCNNNNNNNGG 1 cut(s) 1568
Bse1I ACTGG 4 cut(s) 482, 724, 896, 1317
Bse21I CCTNAGG 1 cut(s) 167
BseBI CCWGG 3 cut(s) 655, 1353, 1743
BseCI ATCGAT 1 cut(s) 1773
BseDI CCNNGG 5 cut(s) 342, 590, 654, 870, 1299
BseGI GGATG 6 cut(s) 55, 385, 664, 1277, 1509, 1711
BseLI CCNNNNNNNGG 1 cut(s) 1568
BseMII CTCAG 3 cut(s) 96, 1113, 1824
BseNI ACTGG 4 cut(s) 482, 724, 896, 1317
BseRI GAGGAG 5 cut(s) 623, 803, 988, 1535, 1622
BseXI GCAGC 7 cut(s) 507, 740, 988, 1176, 1221, 1592, 1816
BsgI GTGCAG 2 cut(s) 514, 1183
Bsh1236I CGCG 2 cut(s) 365, 1270
Bsh1285I CGRYCG 1 cut(s) 1752
BshFI GGCC 3 cut(s) 1287, 1844, 1863
BshNI GGYRCC 3 cut(s) 162, 338, 1537
BshVI ATCGAT 1 cut(s) 1773
BsiEI CGRYCG 1 cut(s) 1752
BsiHKAI GWGCWC 1 cut(s) 1839
BslFI GGGAC 1 cut(s) 749
BslI CCNNNNNNNGG 1 cut(s) 1568
BsmFI GGGAC 1 cut(s) 749
BsnI GGCC 3 cut(s) 1287, 1844, 1863
Bsp119I TTCGAA 1 cut(s) 1132
Bsp1286I GDGCHC 1 cut(s) 1839
Bsp1720I GCTNAGC 1 cut(s) 1833
BspACI CCGC 5 cut(s) 232, 363, 676, 1288, 1796
BspANI GGCC 3 cut(s) 1287, 1844, 1863
BspCNI CTCAG 3 cut(s) 95, 1114, 1825
BspDI ATCGAT 1 cut(s) 1773
BspFNI CGCG 2 cut(s) 365, 1270
BspHI TCATGA 1 cut(s) 937
BspLI GGNNCC 7 cut(s) 164, 319, 340, 737, 1334, 1384, 1539
BspMAI CTGCAG 1 cut(s) 730
BspPI GGATC 4 cut(s) 211, 730, 993, 1753
BspT104I TTCGAA 1 cut(s) 1132
BspT107I GGYRCC 3 cut(s) 162, 338, 1537
BsrI ACTGG 4 cut(s) 482, 724, 896, 1317
BssECI CCNNGG 5 cut(s) 342, 590, 654, 870, 1299
BssNI GRCGYC 1 cut(s) 1538
BssT1I CCWWGG 3 cut(s) 342, 590, 1299
Bst2UI CCWGG 3 cut(s) 655, 1353, 1743
Bst4CI ACNGT 5 cut(s) 187, 275, 865, 874, 1510
Bst6I CTCTTC 3 cut(s) 756, 764, 837
BstACI GRCGYC 1 cut(s) 1538
BstAPI GCANNNNNTGC 1 cut(s) 558
BstBAI YACGTR 1 cut(s) 1034
BstBI TTCGAA 1 cut(s) 1132
BstC8I GCNNGC 4 cut(s) 554, 587, 702, 1193
BstDEI CTNAG 5 cut(s) 82, 167, 956, 1122, 1833
BstDSI CCRYGG 1 cut(s) 870
BstF5I GGATG 6 cut(s) 55, 385, 664, 1277, 1509, 1711
BstFNI CGCG 2 cut(s) 365, 1270
BstH2I RGCGCY 1 cut(s) 1541
BstHHI GCGC 2 cut(s) 1272, 1540
BstMCI CGRYCG 1 cut(s) 1752
BstMWI GCNNNNNNNGC 3 cut(s) 105, 558, 1586
BstNI CCWGG 3 cut(s) 655, 1353, 1743
BstNSI RCATGY 4 cut(s) 480, 556, 704, 1241
BstSCI CCNGG 3 cut(s) 653, 1351, 1741
BstSFI CTRYAG 2 cut(s) 186, 726
BstSNI TACGTA 1 cut(s) 1034
BstUI CGCG 2 cut(s) 365, 1270
BstV1I GCAGC 7 cut(s) 507, 740, 988, 1176, 1221, 1592, 1816
BstX2I RGATCY 4 cut(s) 203, 215, 722, 985
BstXI CCANNNNNNTGG 1 cut(s) 1871
BstYI RGATCY 4 cut(s) 203, 215, 722, 985
Bsu15I ATCGAT 1 cut(s) 1773
Bsu36I CCTNAGG 1 cut(s) 167
BsuI GTATCC 2 cut(s) 886, 1409
BsuRI GGCC 3 cut(s) 1287, 1844, 1863
BsuTUI ATCGAT 1 cut(s) 1773
BtgI CCRYGG 1 cut(s) 870
BtgZI GCGATG 1 cut(s) 141
BtrI CACGTC 1 cut(s) 1756
BtsCI GGATG 6 cut(s) 55, 385, 664, 1277, 1509, 1711
BtsIMutI CAGTG 4 cut(s) 299, 717, 1167, 1784
Cac8I GCNNGC 4 cut(s) 554, 587, 702, 1193
CaiI CAGNNNCTG 1 cut(s) 1184
CciI TCATGA 1 cut(s) 937
CfoI GCGC 2 cut(s) 1272, 1540
Cfr13I GGNCC 4 cut(s) 171, 318, 526, 736
ClaI ATCGAT 1 cut(s) 1773
CseI GACGC 1 cut(s) 77
Csp6I GTAC 2 cut(s) 571, 953
CviAII CATG 9 cut(s) 179, 477, 530, 553, 701, 839, 938, 1058, 1238
CviQI GTAC 2 cut(s) 571, 953
DdeI CTNAG 5 cut(s) 82, 167, 956, 1122, 1833
DinI GGCGCC 1 cut(s) 1539
DraI TTTAAA 1 cut(s) 283
EaeI YGGCCR 2 cut(s) 1285, 1861
Eam1104I CTCTTC 3 cut(s) 756, 764, 837
EarI CTCTTC 3 cut(s) 756, 764, 837
Eco105I TACGTA 1 cut(s) 1034
Eco130I CCWWGG 3 cut(s) 342, 590, 1299
Eco32I GATATC 1 cut(s) 1791
Eco47I GGWCC 4 cut(s) 171, 318, 526, 736
Eco57I CTGAAG 4 cut(s) 456, 1191, 1357, 1378
Eco81I CCTNAGG 1 cut(s) 167
EcoO109I RGGNCCY 2 cut(s) 171, 318
EcoRII CCWGG 3 cut(s) 653, 1351, 1741
EcoRV GATATC 1 cut(s) 1791
EcoT14I CCWWGG 3 cut(s) 342, 590, 1299
EcoT22I ATGCAT 1 cut(s) 1063
EgeI GGCGCC 1 cut(s) 1539
EheI GGCGCC 1 cut(s) 1539
ErhI CCWWGG 3 cut(s) 342, 590, 1299
FaeI CATG 9 cut(s) 182, 480, 533, 556, 704, 842, 941, 1061, 1241
FalI AAGNNNNNCTT 2 cut(s) 1424, 1456
FaqI GGGAC 1 cut(s) 749
FatI CATG 9 cut(s) 178, 476, 529, 552, 700, 838, 937, 1057, 1237
FauI CCCGC 1 cut(s) 225
FbaI TGATCA 1 cut(s) 1545
FblI GTMKAC 1 cut(s) 1752
Fnu4HI GCNGC 9 cut(s) 496, 729, 1002, 1165, 1235, 1288, 1581, 1796, 1830
FokI GGATG 6 cut(s) 62, 372, 671, 1264, 1516, 1718
Fsp4HI GCNGC 9 cut(s) 496, 729, 1002, 1165, 1235, 1288, 1581, 1796, 1830
FspBI CTAG 2 cut(s) 801, 1151
GlaI GCGC 2 cut(s) 1271, 1539
GluI GCNGC 9 cut(s) 496, 729, 1002, 1165, 1235, 1288, 1581, 1796, 1830
GsuI CTGGAG 2 cut(s) 216, 1374
HaeII RGCGCY 1 cut(s) 1541
HaeIII GGCC 3 cut(s) 1287, 1844, 1863
HgaI GACGC 1 cut(s) 77
HhaI GCGC 2 cut(s) 1272, 1540
Hin1I GRCGYC 1 cut(s) 1538
Hin1II CATG 9 cut(s) 182, 480, 533, 556, 704, 842, 941, 1061, 1241
Hin6I GCGC 2 cut(s) 1270, 1538
HinP1I GCGC 2 cut(s) 1270, 1538
HincII GTYRAC 3 cut(s) 88, 255, 1753
HindII GTYRAC 3 cut(s) 88, 255, 1753
HindIII AAGCTT 1 cut(s) 1415
HinfI GANTC 7 cut(s) 80, 428, 934, 943, 965, 1572, 1813
HphI GGTGA 2 cut(s) 1315, 1674
Hpy166II GTNNAC 6 cut(s) 88, 255, 487, 1084, 1369, 1753
Hpy188I TCNGA 3 cut(s) 41, 325, 970
Hpy188III TCNNGA 9 cut(s) 506, 752, 825, 938, 947, 1019, 1613, 1722, 1820
Hpy8I GTNNAC 6 cut(s) 88, 255, 487, 1084, 1369, 1753
Hpy99I CGWCG 2 cut(s) 1757, 1821
HpyAV CCTTC 8 cut(s) 149, 503, 517, 607, 626, 798, 1106, 1489
HpyCH4III ACNGT 5 cut(s) 187, 275, 865, 874, 1510
HpyCH4IV ACGT 2 cut(s) 1033, 1755
HpyF10VI GCNNNNNNNGC 3 cut(s) 105, 558, 1586
HpyF3I CTNAG 5 cut(s) 82, 167, 956, 1122, 1833
HpySE526I ACGT 2 cut(s) 1033, 1755
Hsp92I GRCGYC 1 cut(s) 1538
Hsp92II CATG 9 cut(s) 182, 480, 533, 556, 704, 842, 941, 1061, 1241
HspAI GCGC 2 cut(s) 1270, 1538
KasI GGCGCC 1 cut(s) 1537
Ksp22I TGATCA 1 cut(s) 1545
LmnI GCTCC 6 cut(s) 790, 817, 910, 1255, 1338, 1635
Lsp1109I GCAGC 7 cut(s) 507, 740, 988, 1176, 1221, 1592, 1816
LweI GCATC 2 cut(s) 1013, 1165
MaeI CTAG 2 cut(s) 801, 1151
MaeII ACGT 2 cut(s) 1033, 1755
MaeIII GTNAC 3 cut(s) 65, 405, 1524
MflI RGATCY 4 cut(s) 203, 215, 722, 985
MhlI GDGCHC 1 cut(s) 1839
MluCI AATT 9 cut(s) 278, 533, 623, 746, 755, 1044, 1483, 1616, 1783
Mly113I GGCGCC 1 cut(s) 1538
MlyI GAGTC 3 cut(s) 74, 1581, 1822
MmeI TCCRAC 2 cut(s) 1073, 1647
Mph1103I ATGCAT 1 cut(s) 1063
MroXI GAANNNNTTC 1 cut(s) 1595
MseI TTAA 5 cut(s) 282, 1013, 1206, 1260, 1482
MslI CAYNNNNRTG 1 cut(s) 1341
MspR9I CCNGG 3 cut(s) 655, 1353, 1743
MvaI CCWGG 3 cut(s) 655, 1353, 1743
MvnI CGCG 2 cut(s) 365, 1270
MwoI GCNNNNNNNGC 3 cut(s) 105, 558, 1586
NarI GGCGCC 1 cut(s) 1538
NlaIII CATG 9 cut(s) 182, 480, 533, 556, 704, 842, 941, 1061, 1241
NlaIV GGNNCC 7 cut(s) 164, 319, 340, 737, 1334, 1384, 1539
NmeAIII GCCGAG 1 cut(s) 201
NmuCI GTSAC 1 cut(s) 65
NsiI ATGCAT 1 cut(s) 1063
NspI RCATGY 4 cut(s) 480, 556, 704, 1241
NspV TTCGAA 1 cut(s) 1132
PaeI GCATGC 2 cut(s) 556, 704
PagI TCATGA 1 cut(s) 937
PciI ACATGT 1 cut(s) 476
PcsI WCGNNNNNNNCGW 2 cut(s) 701, 1822
PdmI GAANNNNTTC 1 cut(s) 1595
PfeI GAWTC 4 cut(s) 428, 934, 943, 965
PfoI TCCNGGA 1 cut(s) 1741
PkrI GCNGC 9 cut(s) 497, 730, 1003, 1166, 1236, 1289, 1582, 1797, 1831
PleI GAGTC 3 cut(s) 74, 1580, 1821
PluTI GGCGCC 1 cut(s) 1541
PpsI GAGTC 3 cut(s) 74, 1580, 1821
Ppu21I YACGTR 1 cut(s) 1034
PpuMI RGGWCCY 2 cut(s) 171, 318
PscI ACATGT 1 cut(s) 476
Psp5II RGGWCCY 2 cut(s) 171, 318
Psp6I CCWGG 3 cut(s) 653, 1351, 1741
PspGI CCWGG 3 cut(s) 653, 1351, 1741
PspN4I GGNNCC 7 cut(s) 164, 319, 340, 737, 1334, 1384, 1539
PspPI GGNCC 4 cut(s) 171, 318, 526, 736
PspPPI RGGWCCY 2 cut(s) 171, 318
PstI CTGCAG 1 cut(s) 730
PstNI CAGNNNCTG 1 cut(s) 1184
PsuI RGATCY 4 cut(s) 203, 215, 722, 985
RsaI GTAC 2 cut(s) 572, 954
RsaNI GTAC 2 cut(s) 571, 953
RseI CAYNNNNRTG 1 cut(s) 1341
SalI GTCGAC 1 cut(s) 1751
SaqAI TTAA 5 cut(s) 282, 1013, 1206, 1260, 1482
SatI GCNGC 9 cut(s) 496, 729, 1002, 1165, 1235, 1288, 1581, 1796, 1830
Sau96I GGNCC 4 cut(s) 171, 318, 526, 736
SchI GAGTC 3 cut(s) 74, 1581, 1822
ScrFI CCNGG 3 cut(s) 655, 1353, 1743
SduI GDGCHC 1 cut(s) 1839
SfaNI GCATC 2 cut(s) 1013, 1165
SfcI CTRYAG 2 cut(s) 186, 726
SfoI GGCGCC 1 cut(s) 1539
SfuI TTCGAA 1 cut(s) 1132
SinI GGWCC 4 cut(s) 171, 318, 526, 736
SmiMI CAYNNNNRTG 1 cut(s) 1341
SnaBI TACGTA 1 cut(s) 1034
SphI GCATGC 2 cut(s) 556, 704
Sse9I AATT 9 cut(s) 278, 533, 623, 746, 755, 1044, 1483, 1616, 1783
SsiI CCGC 5 cut(s) 232, 363, 676, 1288, 1796
SspDI GGCGCC 1 cut(s) 1537
SspMI CTAG 2 cut(s) 801, 1151
StyD4I CCNGG 3 cut(s) 653, 1351, 1741
StyI CCWWGG 3 cut(s) 342, 590, 1299
TaaI ACNGT 5 cut(s) 187, 275, 865, 874, 1510
TaiI ACGT 2 cut(s) 1036, 1758
TaqI TCGA 8 cut(s) 243, 391, 1118, 1132, 1326, 1752, 1773, 1825
TaqII GACCGA 1 cut(s) 1738
TasI AATT 9 cut(s) 278, 533, 623, 746, 755, 1044, 1483, 1616, 1783
TatI WGTACW 1 cut(s) 952
TauI GCSGC 2 cut(s) 1290, 1798
TfiI GAWTC 4 cut(s) 428, 934, 943, 965
Tru1I TTAA 5 cut(s) 282, 1013, 1206, 1260, 1482
Tru9I TTAA 5 cut(s) 282, 1013, 1206, 1260, 1482
TscAI CASTG 4 cut(s) 299, 724, 1174, 1784
TseFI GTSAC 1 cut(s) 65
TseI GCWGC 7 cut(s) 495, 728, 1001, 1164, 1234, 1580, 1829
Tsp45I GTSAC 1 cut(s) 65
TspDTI ATGAA 5 cut(s) 167, 546, 855, 999, 1588
TspRI CASTG 4 cut(s) 299, 724, 1174, 1784
VpaK11BI GGWCC 4 cut(s) 171, 318, 526, 736
XapI RAATTY 6 cut(s) 278, 623, 746, 755, 1616, 1783
XceI RCATGY 4 cut(s) 480, 556, 704, 1241
XcmI CCANNNNNNNNNTGG 1 cut(s) 1806
XmiI GTMKAC 1 cut(s) 1752
XmnI GAANNNNTTC 1 cut(s) 1595
XspI CTAG 2 cut(s) 801, 1151
Zsp2I ATGCAT 1 cut(s) 1063
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.