Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000779

Physical Location & Seq

Genomic Coordinates Forward (+)

60598920 .. 60600427

Gene Structure 1508 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ40585

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1416 bp

ATGGGGCCGAGGAGAGCTGGAGATCCACCACCATATTCATCAACACCACCGCGTCCACCTGACCCAGGTAATTTGAGGATGAAGCTCCAAGTCGAGTTAGAAGAGACGGCGGCGGGATTTCGTGAGACAGCGGCGGAATGTCGTGAACTTCACAAATCCATGGCATCAATGGCGACGGAACAGGCTATATTTCAGTCCGAGATATTAAACGAATTGAGGCAATTTCGGTTGGAGCGAACAGCTCAGTTGAGGCCGCCGCCGCCACCACCAGCTGTAATGGCGGATCCCTACCATTACCAGCAGCACCAACCTCCGCTGTCGTCAAGACCACCAATCCTTCACCAGCAGCAAGGGGTATGGTACTCGAGCCAAAACCAGTACCAGTACCACTCATTACAGCCCCCGTCGCTTCCACAACAGTGGGTTCCACCACCTCACGCCGACCATCTACCTCCCTCGCTGGCCTATTATCATCCGCCACCGCCTCCTCATTATGCGCACCATCATTATCCTCAATCTCTTTCTCACGGACCTCCTCACTCTTATCATCCTCAGCAGCTCAATCGGGAATGGGGAGCTCAGAGTCCACCGAGGTTGGTGCAGCAGAAGTCGGGAATCGGGTTAGCTGAGAGGGGCCCAGAGATCAACTCGTTTTGCTCACCGGGTTCTTCTCCGATTATGACGACGGGCTCCGTTCAAGTGCAAGCTATGGGTTGTTTGAGCACGATGGATGAATCTAAAATTAAAGGCATTGAGGTTCCAATAGGTGTGAGCTTGGAGAATGGATTCGATCAACTTGGCCGCGATGTTGAATTGCAATCCGAGTATGACAAAGTGTTTGTTGCTGTTGTGAATCCAGAACCAGTGGCCCAACCGTCTTGGTTGTTGAAGCAGACCGAACAACGAAAATTCACGCTACATGATGGCAATGGAAACACATGCAATTGCTACAGCAGTAGCTTGGGCTCCCAAGAGAACAACAGTGATGTAAGTTCAGTGCCTCCTATAGTTTCTGAAGCTCTGAAAGTTCAAGAGACCTTAGATTCAATTCATTCCTTGTGTTTAAAAACTGAAAGAAAGAAACTTATTTGTGAAAATGCTACTGAGTACTTTGTTAGCCTTGCTGTCAATATTAACGTTGATGTCAATCATAATTCTATGAGTGAAGGACCTGAGTTGGTTACTGCTAGCTTGAAACAAGAGTTGGGTTTAGTTCCTACACAGGGAACCTCCATTCATCAAGTTAAACCATGGTCTGCCTATGACGTCGAAGTGAATGATGAGAGGTTAGAAGACCATGCTCTCCACCTGTTTGATAGAATGCCTAGGCCAGATGTGGACTTATCGAATGCTATATATTGGGTCGTTCTGGTAAAGCTGGGAGGTCAGGGGATGCTGAAGACCCATTTCCAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003924 GO:0004888 GO:0004930 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006605 GO:0006810 GO:0006886 GO:0007154 GO:0007165 GO:0007186 GO:0008104 GO:0008150 GO:0009507 GO:0009526 GO:0009527 GO:0009536 GO:0009707 GO:0009941 GO:0009987 GO:0015031 GO:0015833 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017038 GO:0017111 GO:0019867 GO:0023052 GO:0031090 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0032991 GO:0033036 GO:0033365 GO:0034613 GO:0038023 GO:0042170 GO:0042886 GO:0043021 GO:0043024 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0044877 GO:0045036 GO:0045037 GO:0045184 GO:0046907 GO:0050789 GO:0050794 GO:0050896 GO:0051087 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051716 GO:0055085 GO:0060089 GO:0061927 GO:0065002 GO:0065007 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0072594 GO:0072596 GO:0072598 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AIG1 TOC159_MAD

Protein Analysis

471

Amino Acids

52.55

Weight (kDa)

5.85

Isoelectric Point (pI)

60.56

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000779)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g29862
rosa_chinensis	RchiOBHm_Chr1g0313641 RchiOBHm_Chr4g0408161 RchiOBHm_Chr4g0408171 RchiOBHm_Chr4g0437611 RchiOBHm_Chr4g0437621 RchiOBHm_Chr4g0444671 RchiOBHm_Chr5g0045021 RchiOBHm_Chr5g0070121 RchiOBHm_Chr5g0082551 RchiOBHm_Chr6g0247501 RchiOBHm_Chr6g0271311 RchiOBHm_Chr6g0290811 RchiOBHm_Chr6g0310571
rosa_laevigata	RLG00000004718 RLG00000008552 RLG00000015595
rosa_multiflora	Rmu_co8342433.1_g000001 Rmu_sc0000147.1_g000080 Rmu_sc0000391.1_g000018 Rmu_sc0000753.1_g000021 Rmu_sc0000870.1_g000071 Rmu_sc0000870.1_g000072 Rmu_sc0001648.1_g000026 Rmu_sc0001648.1_g000043 Rmu_sc0001972.1_g000009 Rmu_sc0002109.1_g000009 Rmu_sc0003340.1_g000008 Rmu_sc0003340.1_g000009 Rmu_sc0004874.1_g000014 Rmu_sc0005823.1_g000009 Rmu_sc0005941.1_g000006 Rmu_sc0009850.1_g000015 Rmu_sc0015511.1_g000012
rosa_roxburghii	Rroxscaffold_1G00034320 Rroxscaffold_1G00036130 Rroxscaffold_1G00043440 Rroxscaffold_1G00043450 Rroxscaffold_1G00050660 Rroxscaffold_1G00050670 Rroxscaffold_1G00066940 Rroxscaffold_2G00094100 Rroxscaffold_2G00120240 Rroxscaffold_4G00287900 Rroxscaffold_4G00287910 Rroxscaffold_4G00290700 Rroxscaffold_4G00290710 Rroxscaffold_4G00298640 Rroxscaffold_4G00308540 Rroxscaffold_5G00369420 Rroxscaffold_7G00217900
rosa_rugosa	Rorug06G0077100
rosa_samantha	Rh1AG005600 Rh1AG005700 Rh1BG433000 Rh1DG003900 Rh2CG286600 Rh3AG243900 Rh3BG368800 Rh5AG301800 Rh5BG309500 Rh5CG501500 Rh5CG501600 Rh5DG320200 Rh6AG179500 Rh6CG338800 Rh6CG405000 Rh6DG092100 Rh7AG294100 Rh7CG239600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1269
Acc16I	TGCGCA	1 cut(s)	498
AccII	CGCG	2 cut(s)	52, 804
AclI	AACGTT	1 cut(s)	1137
AclWI	GGATC	3 cut(s)	17, 278, 291
AcoI	YGGCCR	1 cut(s)	799
AcsI	RAATTY	1 cut(s)	908
AcuI	CTGAAG	1 cut(s)	1035
AcyI	GRCGYC	1 cut(s)	1266
AfaI	GTAC	4 cut(s)	362, 380, 386, 1109
AfiI	CCNNNNNNNGG	2 cut(s)	65, 1223
AgsI	TTSAA	6 cut(s)	698, 812, 889, 1031, 1047, 1195
AjnI	CCWGG	1 cut(s)	64
AjuI	GAANNNNNNNTTGG	2 cut(s)	1187, 1219
AleI	CACNNNNGTG	1 cut(s)	418
Alw21I	GWGCWC	2 cut(s)	580, 725
Alw26I	GTCTC	3 cut(s)	98, 119, 1028
AlwI	GGATC	3 cut(s)	17, 278, 291
Ama87I	CYCGRG	1 cut(s)	364
AoxI	GGCC	7 cut(s)	5, 251, 462, 634, 799, 867, 1328
ApaI	GGGCCC	1 cut(s)	638
ApeKI	GCWGC	4 cut(s)	301, 346, 556, 601
ApoI	RAATTY	1 cut(s)	908
ArsI	GACNNNNNNTTYG	2 cut(s)	821, 853
Asp700I	GAANNNNTTC	1 cut(s)	785
AspA2I	CCTAGG	1 cut(s)	1325
AspLEI	GCGC	1 cut(s)	499
AspS9I	GGNCC	6 cut(s)	5, 530, 634, 635, 868, 1169
AsuC2I	CCSGG	1 cut(s)	663
AsuHPI	GGTGA	2 cut(s)	332, 651
AsuNHI	GCTAGC	1 cut(s)	1187
AvaI	CYCGRG	1 cut(s)	364
AvaII	GGWCC	2 cut(s)	530, 1169
AvrII	CCTAGG	1 cut(s)	1325
BaeGI	GKGCMC	1 cut(s)	638
BamHI	GGATCC	1 cut(s)	283
BanII	GRGCYC	4 cut(s)	580, 638, 692, 968
BbsI	GAAGAC	2 cut(s)	1299, 1406
Bbv12I	GWGCWC	2 cut(s)	580, 725
BbvCI	CCTCAGC	1 cut(s)	552
BbvI	GCAGC	4 cut(s)	313, 358, 568, 613
BccI	CCATC	4 cut(s)	453, 510, 721, 917
BceAI	ACGGC	1 cut(s)	123
BcgI	CGANNNNNNTGC	4 cut(s)	545, 579, 580, 614
BciT130I	CCWGG	1 cut(s)	66
BcnI	CCSGG	1 cut(s)	663
BcoDI	GTCTC	3 cut(s)	98, 119, 1028
BfaI	CTAG	2 cut(s)	1188, 1326
BfmI	CTRYAG	2 cut(s)	949, 1005
BlnI	CCTAGG	1 cut(s)	1325
BmcAI	AGTACT	1 cut(s)	1109
Bme1390I	CCNGG	2 cut(s)	66, 663
Bme18I	GGWCC	2 cut(s)	530, 1169
BmeT110I	CYCGRG	1 cut(s)	364
BmgT120I	GGNCC	6 cut(s)	5, 530, 634, 635, 868, 1169
BmiI	GGNNCC	9 cut(s)	6, 285, 426, 635, 636, 691, 759, 967, 1228
BmrFI	CCNGG	2 cut(s)	66, 663
BmsI	GCATC	2 cut(s)	173, 1383
BmtI	GCTAGC	1 cut(s)	1191
BpiI	GAAGAC	2 cut(s)	1299, 1406
BplI	GAGNNNNNCTC	2 cut(s)	632, 664
BpmI	CTGGAG	1 cut(s)	39
Bpu10I	CCTNAGC	1 cut(s)	552
BpuMI	CCSGG	1 cut(s)	663
BsaBI	GATNNNNATC	1 cut(s)	1146
BsaHI	GRCGYC	1 cut(s)	1266
BsaI	GGTCTC	1 cut(s)	1028
BsaJI	CCNNGG	6 cut(s)	8, 64, 159, 590, 1250, 1325
Bsc4I	CCNNNNNNNGG	2 cut(s)	65, 1223
Bse1I	ACTGG	3 cut(s)	376, 382, 863
Bse3DI	GCAATG	1 cut(s)	934
Bse8I	GATNNNNATC	1 cut(s)	1146
BseBI	CCWGG	1 cut(s)	66
BseDI	CCNNGG	6 cut(s)	8, 64, 159, 590, 1250, 1325
BseGI	GGATG	5 cut(s)	84, 472, 547, 736, 1398
BseJI	GATNNNNATC	1 cut(s)	1146
BseLI	CCNNNNNNNGG	2 cut(s)	65, 1223
BseMI	GCAATG	1 cut(s)	934
BseMII	CTCAG	6 cut(s)	257, 566, 593, 618, 1095, 1164
BseNI	ACTGG	3 cut(s)	376, 382, 863
BseRI	GAGGAG	3 cut(s)	25, 477, 525
BseSI	GKGCMC	1 cut(s)	638
BseXI	GCAGC	4 cut(s)	313, 358, 568, 613
BseYI	CCCAGC	1 cut(s)	1378
BsgI	GTGCAG	1 cut(s)	620
Bsh1236I	CGCG	2 cut(s)	52, 804
BshFI	GGCC	7 cut(s)	7, 253, 464, 636, 801, 869, 1330
BsiHKAI	GWGCWC	2 cut(s)	580, 725
BsiHKCI	CYCGRG	1 cut(s)	364
BsiSI	CCGG	1 cut(s)	662
BslI	CCNNNNNNNGG	2 cut(s)	65, 1223
BsmAI	GTCTC	3 cut(s)	98, 119, 1028
BsmBI	CGTCTC	1 cut(s)	98
BsmI	GAATGC	2 cut(s)	1326, 1354
BsnI	GGCC	7 cut(s)	7, 253, 464, 636, 801, 869, 1330
Bso31I	GGTCTC	1 cut(s)	1028
BsoBI	CYCGRG	1 cut(s)	364
Bsp120I	GGGCCC	1 cut(s)	634
Bsp1286I	GDGCHC	5 cut(s)	580, 638, 692, 725, 968
Bsp143I	GATC	4 cut(s)	22, 283, 642, 790
Bsp19I	CCATGG	2 cut(s)	159, 1250
BspANI	GGCC	7 cut(s)	7, 253, 464, 636, 801, 869, 1330
BspCNI	CTCAG	6 cut(s)	256, 565, 592, 619, 1096, 1165
BspFNI	CGCG	2 cut(s)	52, 804
BspLI	GGNNCC	9 cut(s)	6, 285, 426, 635, 636, 691, 759, 967, 1228
BspOI	GCTAGC	1 cut(s)	1191
BspPI	GGATC	3 cut(s)	17, 278, 291
BspTNI	GGTCTC	1 cut(s)	1028
BsrDI	GCAATG	1 cut(s)	934
BsrI	ACTGG	3 cut(s)	376, 382, 863
BssECI	CCNNGG	6 cut(s)	8, 64, 159, 590, 1250, 1325
BssMI	GATC	4 cut(s)	22, 283, 642, 790
BssNI	GRCGYC	1 cut(s)	1266
BssT1I	CCWWGG	3 cut(s)	159, 1250, 1325
Bst2UI	CCWGG	1 cut(s)	66
Bst4CI	ACNGT	3 cut(s)	420, 876, 983
Bst6I	CTCTTC	1 cut(s)	96
BstACI	GRCGYC	1 cut(s)	1266
BstC8I	GCNNGC	3 cut(s)	462, 705, 1189
BstDEI	CTNAG	7 cut(s)	243, 552, 579, 627, 1039, 1104, 1173
BstDSI	CCRYGG	2 cut(s)	159, 1250
BstENI	CCTNNNNNAGG	1 cut(s)	63
BstF5I	GGATG	5 cut(s)	84, 472, 547, 736, 1398
BstFNI	CGCG	2 cut(s)	52, 804
BstHHI	GCGC	1 cut(s)	499
BstKTI	GATC	4 cut(s)	25, 286, 645, 793
BstMAI	GTCTC	3 cut(s)	98, 119, 1028
BstMBI	GATC	4 cut(s)	22, 283, 642, 790
BstMWI	GCNNNNNNNGC	4 cut(s)	170, 259, 278, 406
BstNI	CCWGG	1 cut(s)	66
BstNSI	RCATGY	1 cut(s)	942
BstSCI	CCNGG	2 cut(s)	64, 661
BstSFI	CTRYAG	2 cut(s)	949, 1005
BstSLI	GKGCMC	1 cut(s)	638
BstUI	CGCG	2 cut(s)	52, 804
BstV1I	GCAGC	4 cut(s)	313, 358, 568, 613
BstV2I	GAAGAC	2 cut(s)	1299, 1406
BstX2I	RGATCY	2 cut(s)	22, 283
BstXI	CCANNNNNNTGG	1 cut(s)	420
BstYI	RGATCY	2 cut(s)	22, 283
BsuRI	GGCC	7 cut(s)	7, 253, 464, 636, 801, 869, 1330
BtgI	CCRYGG	2 cut(s)	159, 1250
BtgZI	GCGATG	1 cut(s)	819
BtsCI	GGATG	5 cut(s)	84, 472, 547, 736, 1398
BtsIMutI	CAGTG	4 cut(s)	425, 870, 988, 1002
Cac8I	GCNNGC	3 cut(s)	462, 705, 1189
CfoI	GCGC	1 cut(s)	499
Cfr13I	GGNCC	6 cut(s)	5, 530, 634, 635, 868, 1169
CseI	GACGC	1 cut(s)	41
Csp6I	GTAC	4 cut(s)	361, 379, 385, 1108
CspCI	CAANNNNNGTGG	2 cut(s)	576, 611
CviAII	CATG	5 cut(s)	160, 920, 939, 1251, 1298
CviQI	GTAC	4 cut(s)	361, 379, 385, 1108
DdeI	CTNAG	7 cut(s)	243, 552, 579, 627, 1039, 1104, 1173
DpnI	GATC	4 cut(s)	24, 285, 644, 792
DpnII	GATC	4 cut(s)	22, 283, 642, 790
DraI	TTTAAA	1 cut(s)	1065
EaeI	YGGCCR	1 cut(s)	799
Eam1104I	CTCTTC	1 cut(s)	96
EarI	CTCTTC	1 cut(s)	96
EciI	GGCGGA	3 cut(s)	149, 296, 465
Ecl136II	GAGCTC	1 cut(s)	578
Eco130I	CCWWGG	3 cut(s)	159, 1250, 1325
Eco24I	GRGCYC	4 cut(s)	580, 638, 692, 968
Eco31I	GGTCTC	1 cut(s)	1028
Eco47I	GGWCC	2 cut(s)	530, 1169
Eco53kI	GAGCTC	1 cut(s)	578
Eco57I	CTGAAG	1 cut(s)	1035
Eco88I	CYCGRG	1 cut(s)	364
EcoICRI	GAGCTC	1 cut(s)	578
EcoNI	CCTNNNNNAGG	1 cut(s)	63
EcoO109I	RGGNCCY	2 cut(s)	634, 1169
EcoRII	CCWGG	1 cut(s)	64
EcoT14I	CCWWGG	3 cut(s)	159, 1250, 1325
EcoT38I	GRGCYC	4 cut(s)	580, 638, 692, 968
ErhI	CCWWGG	3 cut(s)	159, 1250, 1325
Esp3I	CGTCTC	1 cut(s)	98
FaeI	CATG	5 cut(s)	163, 923, 942, 1254, 1301
FatI	CATG	5 cut(s)	159, 919, 938, 1250, 1297
FauI	CCCGC	1 cut(s)	106
FokI	GGATG	5 cut(s)	91, 459, 534, 743, 1405
FriOI	GRGCYC	4 cut(s)	580, 638, 692, 968
FspAI	RTGCGCAY	1 cut(s)	498
FspBI	CTAG	2 cut(s)	1188, 1326
FspI	TGCGCA	1 cut(s)	498
GlaI	GCGC	1 cut(s)	498
GsaI	CCCAGC	1 cut(s)	1382
GsuI	CTGGAG	1 cut(s)	39
HaeIII	GGCC	7 cut(s)	7, 253, 464, 636, 801, 869, 1330
HapII	CCGG	1 cut(s)	662
HgaI	GACGC	1 cut(s)	41
HhaI	GCGC	1 cut(s)	499
Hin1I	GRCGYC	1 cut(s)	1266
Hin1II	CATG	5 cut(s)	163, 923, 942, 1254, 1301
Hin6I	GCGC	1 cut(s)	497
HinP1I	GCGC	1 cut(s)	497
HinfI	GANTC	6 cut(s)	583, 615, 734, 786, 853, 1043
HpaII	CCGG	1 cut(s)	662
HphI	GGTGA	2 cut(s)	332, 651
Hpy166II	GTNNAC	4 cut(s)	56, 146, 587, 1339
Hpy188I	TCNGA	6 cut(s)	199, 582, 675, 823, 1015, 1023
Hpy188III	TCNNGA	7 cut(s)	122, 143, 324, 566, 612, 857, 1031
Hpy8I	GTNNAC	4 cut(s)	56, 146, 587, 1339
Hpy99I	CGWCG	4 cut(s)	178, 409, 688, 1271
HpyAV	CCTTC	2 cut(s)	347, 1160
HpyCH4III	ACNGT	3 cut(s)	420, 876, 983
HpyCH4IV	ACGT	2 cut(s)	1137, 1266
HpyCH4V	TGCA	4 cut(s)	601, 703, 817, 942
HpyF10VI	GCNNNNNNNGC	4 cut(s)	170, 259, 278, 406
HpyF3I	CTNAG	7 cut(s)	243, 552, 579, 627, 1039, 1104, 1173
HpySE526I	ACGT	2 cut(s)	1137, 1266
Hsp92I	GRCGYC	1 cut(s)	1266
Hsp92II	CATG	5 cut(s)	163, 923, 942, 1254, 1301
HspAI	GCGC	1 cut(s)	497
Kzo9I	GATC	4 cut(s)	22, 283, 642, 790
LmnI	GCTCC	5 cut(s)	90, 232, 575, 695, 971
Lsp1109I	GCAGC	4 cut(s)	313, 358, 568, 613
LweI	GCATC	2 cut(s)	173, 1383
MaeI	CTAG	2 cut(s)	1188, 1326
MaeII	ACGT	2 cut(s)	1137, 1266
MaeIII	GTNAC	1 cut(s)	1180
MalI	GATC	4 cut(s)	24, 285, 644, 792
MboI	GATC	4 cut(s)	22, 283, 642, 790
MboII	GAAGA	4 cut(s)	113, 660, 1304, 1411
MfeI	CAATTG	1 cut(s)	943
MflI	RGATCY	2 cut(s)	22, 283
MhlI	GDGCHC	5 cut(s)	580, 638, 692, 725, 968
MluCI	AATT	9 cut(s)	70, 212, 221, 741, 812, 908, 943, 1047, 1153
MlyI	GAGTC	1 cut(s)	592
MmeI	TCCRAC	1 cut(s)	210
MroXI	GAANNNNTTC	1 cut(s)	785
MseI	TTAA	5 cut(s)	206, 744, 1064, 1134, 1245
MslI	CAYNNNNRTG	1 cut(s)	418
MspA1I	CMGCKG	3 cut(s)	131, 272, 316
MspI	CCGG	1 cut(s)	662
MspR9I	CCNGG	2 cut(s)	66, 663
MunI	CAATTG	1 cut(s)	943
Mva1269I	GAATGC	2 cut(s)	1326, 1354
MvaI	CCWGG	1 cut(s)	66
MvnI	CGCG	2 cut(s)	52, 804
MwoI	GCNNNNNNNGC	4 cut(s)	170, 259, 278, 406
NciI	CCSGG	1 cut(s)	663
NcoI	CCATGG	2 cut(s)	159, 1250
NdeII	GATC	4 cut(s)	22, 283, 642, 790
NheI	GCTAGC	1 cut(s)	1187
NlaIII	CATG	5 cut(s)	163, 923, 942, 1254, 1301
NlaIV	GGNNCC	9 cut(s)	6, 285, 426, 635, 636, 691, 759, 967, 1228
NmeAIII	GCCGAG	1 cut(s)	33
NsbI	TGCGCA	1 cut(s)	498
NspI	RCATGY	1 cut(s)	942
OliI	CACNNNNGTG	1 cut(s)	418
PaeR7I	CTCGAG	1 cut(s)	364
PcsI	WCGNNNNNNNCGW	1 cut(s)	232
PctI	GAATGC	2 cut(s)	1326, 1354
PdmI	GAANNNNTTC	1 cut(s)	785
PfeI	GAWTC	5 cut(s)	615, 734, 786, 853, 1043
PleI	GAGTC	1 cut(s)	591
PpsI	GAGTC	1 cut(s)	591
PpuMI	RGGWCCY	1 cut(s)	1169
Psp124BI	GAGCTC	1 cut(s)	580
Psp1406I	AACGTT	1 cut(s)	1137
Psp5II	RGGWCCY	1 cut(s)	1169
Psp6I	CCWGG	1 cut(s)	64
PspFI	CCCAGC	1 cut(s)	1378
PspGI	CCWGG	1 cut(s)	64
PspN4I	GGNNCC	9 cut(s)	6, 285, 426, 635, 636, 691, 759, 967, 1228
PspOMI	GGGCCC	1 cut(s)	634
PspPI	GGNCC	6 cut(s)	5, 530, 634, 635, 868, 1169
PspPPI	RGGWCCY	1 cut(s)	1169
PspXI	VCTCGAGB	1 cut(s)	364
PsuI	RGATCY	2 cut(s)	22, 283
PvuII	CAGCTG	1 cut(s)	272
RsaI	GTAC	4 cut(s)	362, 380, 386, 1109
RsaNI	GTAC	4 cut(s)	361, 379, 385, 1108
RseI	CAYNNNNRTG	1 cut(s)	418
SacI	GAGCTC	1 cut(s)	580
SaqAI	TTAA	5 cut(s)	206, 744, 1064, 1134, 1245
Sau3AI	GATC	4 cut(s)	22, 283, 642, 790
Sau96I	GGNCC	6 cut(s)	5, 530, 634, 635, 868, 1169
ScaI	AGTACT	1 cut(s)	1109
SchI	GAGTC	1 cut(s)	592
ScrFI	CCNGG	2 cut(s)	66, 663
SduI	GDGCHC	5 cut(s)	580, 638, 692, 725, 968
SfaNI	GCATC	2 cut(s)	173, 1383
SfcI	CTRYAG	2 cut(s)	949, 1005
Sfr274I	CTCGAG	1 cut(s)	364
SinI	GGWCC	2 cut(s)	530, 1169
SlaI	CTCGAG	1 cut(s)	364
SmiMI	CAYNNNNRTG	1 cut(s)	418
SmlI	CTYRAG	1 cut(s)	364
SmoI	CTYRAG	1 cut(s)	364
Sse9I	AATT	9 cut(s)	70, 212, 221, 741, 812, 908, 943, 1047, 1153
SspI	AATATT	1 cut(s)	1132
SspMI	CTAG	2 cut(s)	1188, 1326
SstI	GAGCTC	1 cut(s)	580
StyD4I	CCNGG	2 cut(s)	64, 661
StyI	CCWWGG	3 cut(s)	159, 1250, 1325
TaaI	ACNGT	3 cut(s)	420, 876, 983
TaiI	ACGT	2 cut(s)	1140, 1269
TaqI	TCGA	5 cut(s)	93, 365, 789, 1269, 1346
TaqII	GACCGA	1 cut(s)	911
TasI	AATT	9 cut(s)	70, 212, 221, 741, 812, 908, 943, 1047, 1153
TatI	WGTACW	1 cut(s)	1107
TauI	GCSGC	6 cut(s)	113, 134, 256, 259, 262, 804
TfiI	GAWTC	5 cut(s)	615, 734, 786, 853, 1043
Tru1I	TTAA	5 cut(s)	206, 744, 1064, 1134, 1245
Tru9I	TTAA	5 cut(s)	206, 744, 1064, 1134, 1245
TscAI	CASTG	4 cut(s)	425, 870, 988, 1002
TseI	GCWGC	4 cut(s)	301, 346, 556, 601
TspDTI	ATGAA	5 cut(s)	27, 95, 747, 1040, 1226
TspGWI	ACGGA	3 cut(s)	191, 543, 682
TspRI	CASTG	4 cut(s)	425, 870, 988, 1002
VpaK11BI	GGWCC	2 cut(s)	530, 1169
XagI	CCTNNNNNAGG	1 cut(s)	63
XapI	RAATTY	1 cut(s)	908
XceI	RCATGY	1 cut(s)	942
XcmI	CCANNNNNNNNNTGG	1 cut(s)	166
XhoI	CTCGAG	1 cut(s)	364
XmaJI	CCTAGG	1 cut(s)	1325
XmnI	GAANNNNTTC	1 cut(s)	785
XspI	CTAG	2 cut(s)	1188, 1326
ZraI	GACGTC	1 cut(s)	1267
ZrmI	AGTACT	1 cut(s)	1109

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.