RING-type E3 ubiquitin transferase
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 1560 |
| Acc36I | ACCTGC | 1 cut(s) | 1826 |
| Acc65I | GGTACC | 1 cut(s) | 685 |
| AccB1I | GGYRCC | 1 cut(s) | 685 |
| AccI | GTMKAC | 3 cut(s) | 276, 1252, 1436 |
| AciI | CCGC | 1 cut(s) | 1418 |
| AclWI | GGATC | 3 cut(s) | 414, 1157, 1853 |
| AcoI | YGGCCR | 1 cut(s) | 1272 |
| AcsI | RAATTY | 6 cut(s) | 119, 773, 1103, 1127, 1222, 1457 |
| AcuI | CTGAAG | 2 cut(s) | 1316, 1728 |
| AfaI | GTAC | 3 cut(s) | 45, 338, 687 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 199 |
| AflII | CTTAAG | 1 cut(s) | 32 |
| AflIII | ACRYGT | 1 cut(s) | 811 |
| AgsI | TTSAA | 9 cut(s) | 380, 675, 773, 966, 1108, 1406, 1867, 1873, 1924 |
| AjnI | CCWGG | 4 cut(s) | 94, 941, 1114, 1335 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 386, 418 |
| Alw21I | GWGCWC | 1 cut(s) | 1233 |
| Alw26I | GTCTC | 6 cut(s) | 442, 555, 1048, 1345, 1427, 1511 |
| AlwI | GGATC | 3 cut(s) | 414, 1157, 1853 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1121 |
| AoxI | GGCC | 2 cut(s) | 1272, 1775 |
| ApeKI | GCWGC | 3 cut(s) | 886, 1111, 1703 |
| ApoI | RAATTY | 6 cut(s) | 119, 773, 1103, 1127, 1222, 1457 |
| AseI | ATTAAT | 1 cut(s) | 728 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 59 |
| Asp718I | GGTACC | 1 cut(s) | 685 |
| AspLEI | GCGC | 2 cut(s) | 1294, 1561 |
| AspS9I | GGNCC | 1 cut(s) | 1776 |
| AsuHPI | GGTGA | 5 cut(s) | 214, 746, 1016, 1694, 1777 |
| AsuII | TTCGAA | 1 cut(s) | 53 |
| AsuNHI | GCTAGC | 1 cut(s) | 415 |
| BalI | TGGCCA | 1 cut(s) | 1274 |
| BanI | GGYRCC | 1 cut(s) | 685 |
| BbsI | GAAGAC | 1 cut(s) | 837 |
| Bbv12I | GWGCWC | 1 cut(s) | 1233 |
| BbvI | GCAGC | 3 cut(s) | 898, 1098, 1690 |
| BccI | CCATC | 7 cut(s) | 226, 533, 1190, 1408, 1673, 1721, 1762 |
| BceAI | ACGGC | 1 cut(s) | 141 |
| BciT130I | CCWGG | 4 cut(s) | 96, 943, 1116, 1337 |
| BclI | TGATCA | 2 cut(s) | 711, 1890 |
| BcoDI | GTCTC | 6 cut(s) | 442, 555, 1048, 1345, 1427, 1511 |
| BfaI | CTAG | 4 cut(s) | 350, 416, 971, 1782 |
| BfmI | CTRYAG | 1 cut(s) | 871 |
| BfrI | CTTAAG | 1 cut(s) | 32 |
| BfuAI | ACCTGC | 1 cut(s) | 1826 |
| BisI | GCNGC | 3 cut(s) | 887, 1112, 1704 |
| BlsI | GCNGC | 3 cut(s) | 888, 1113, 1705 |
| Bme1390I | CCNGG | 4 cut(s) | 96, 943, 1116, 1337 |
| BmgT120I | GGNCC | 1 cut(s) | 1776 |
| BmiI | GGNNCC | 2 cut(s) | 654, 687 |
| BmrFI | CCNGG | 4 cut(s) | 96, 943, 1116, 1337 |
| BmrI | ACTGGG | 1 cut(s) | 1857 |
| BmsI | GCATC | 5 cut(s) | 1124, 1187, 1318, 1531, 1815 |
| BmtI | GCTAGC | 1 cut(s) | 419 |
| BmuI | ACTGGG | 1 cut(s) | 1857 |
| BpiI | GAAGAC | 1 cut(s) | 837 |
| BpmI | CTGGAG | 3 cut(s) | 293, 813, 925 |
| Bpu14I | TTCGAA | 1 cut(s) | 53 |
| BsaAI | YACGTR | 1 cut(s) | 860 |
| BsaBI | GATNNNNATC | 1 cut(s) | 710 |
| BsaI | GGTCTC | 2 cut(s) | 1345, 1427 |
| BsaJI | CCNNGG | 3 cut(s) | 1059, 1580, 1628 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 786, 816 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 199 |
| Bse1I | ACTGG | 2 cut(s) | 796, 1852 |
| Bse8I | GATNNNNATC | 1 cut(s) | 710 |
| BseBI | CCWGG | 4 cut(s) | 96, 943, 1116, 1337 |
| BseDI | CCNNGG | 3 cut(s) | 1059, 1580, 1628 |
| BseGI | GGATG | 2 cut(s) | 1798, 1917 |
| BseJI | GATNNNNATC | 1 cut(s) | 710 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 199 |
| BseMII | CTCAG | 5 cut(s) | 1113, 1226, 1652, 1761, 1890 |
| BseNI | ACTGG | 2 cut(s) | 796, 1852 |
| BseXI | GCAGC | 3 cut(s) | 898, 1098, 1690 |
| BshFI | GGCC | 2 cut(s) | 1274, 1777 |
| BshNI | GGYRCC | 1 cut(s) | 685 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1233 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 199 |
| BsmAI | GTCTC | 6 cut(s) | 442, 555, 1048, 1345, 1427, 1511 |
| BsnI | GGCC | 2 cut(s) | 1274, 1777 |
| Bso31I | GGTCTC | 2 cut(s) | 1345, 1427 |
| Bsp119I | TTCGAA | 1 cut(s) | 53 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1233 |
| Bsp143I | GATC | 5 cut(s) | 406, 711, 1162, 1858, 1890 |
| Bsp19I | CCATGG | 1 cut(s) | 1059 |
| BspACI | CCGC | 1 cut(s) | 1418 |
| BspANI | GGCC | 2 cut(s) | 1274, 1777 |
| BspCNI | CTCAG | 5 cut(s) | 1114, 1225, 1651, 1760, 1891 |
| BspHI | TCATGA | 1 cut(s) | 1537 |
| BspLI | GGNNCC | 2 cut(s) | 654, 687 |
| BspMI | ACCTGC | 1 cut(s) | 1826 |
| BspOI | GCTAGC | 1 cut(s) | 419 |
| BspPI | GGATC | 3 cut(s) | 414, 1157, 1853 |
| BspT104I | TTCGAA | 1 cut(s) | 53 |
| BspT107I | GGYRCC | 1 cut(s) | 685 |
| BspTI | CTTAAG | 1 cut(s) | 32 |
| BspTNI | GGTCTC | 2 cut(s) | 1345, 1427 |
| BsrI | ACTGG | 2 cut(s) | 796, 1852 |
| BssECI | CCNNGG | 3 cut(s) | 1059, 1580, 1628 |
| BssMI | GATC | 5 cut(s) | 406, 711, 1162, 1858, 1890 |
| BssT1I | CCWWGG | 3 cut(s) | 1059, 1580, 1628 |
| Bst2UI | CCWGG | 4 cut(s) | 96, 943, 1116, 1337 |
| Bst4CI | ACNGT | 4 cut(s) | 666, 1445, 1522, 1690 |
| Bst6I | CTCTTC | 3 cut(s) | 346, 951, 1292 |
| BstAFI | CTTAAG | 1 cut(s) | 32 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 803 |
| BstBAI | YACGTR | 1 cut(s) | 860 |
| BstBI | TTCGAA | 1 cut(s) | 53 |
| BstC8I | GCNNGC | 3 cut(s) | 6, 165, 417 |
| BstDEI | CTNAG | 6 cut(s) | 850, 1122, 1212, 1638, 1747, 1899 |
| BstDSI | CCRYGG | 1 cut(s) | 1059 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 197 |
| BstF5I | GGATG | 2 cut(s) | 1798, 1917 |
| BstHHI | GCGC | 2 cut(s) | 1294, 1561 |
| BstKTI | GATC | 5 cut(s) | 409, 714, 1165, 1861, 1893 |
| BstMAI | GTCTC | 6 cut(s) | 442, 555, 1048, 1345, 1427, 1511 |
| BstMBI | GATC | 5 cut(s) | 406, 711, 1162, 1858, 1890 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 25, 112, 148, 173, 803, 1709 |
| BstNI | CCWGG | 4 cut(s) | 96, 943, 1116, 1337 |
| BstNSI | RCATGY | 4 cut(s) | 23, 815, 880, 1242 |
| BstSCI | CCNGG | 4 cut(s) | 94, 941, 1114, 1335 |
| BstSFI | CTRYAG | 1 cut(s) | 871 |
| BstV1I | GCAGC | 3 cut(s) | 898, 1098, 1690 |
| BstV2I | GAAGAC | 1 cut(s) | 837 |
| BstX2I | RGATCY | 2 cut(s) | 406, 1162 |
| BstYI | RGATCY | 2 cut(s) | 406, 1162 |
| BsuRI | GGCC | 2 cut(s) | 1274, 1777 |
| BtgI | CCRYGG | 1 cut(s) | 1059 |
| BtsCI | GGATG | 2 cut(s) | 1798, 1917 |
| BtsIMutI | CAGTG | 3 cut(s) | 662, 789, 1220 |
| BveI | ACCTGC | 1 cut(s) | 1826 |
| Cac8I | GCNNGC | 3 cut(s) | 6, 165, 417 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1121 |
| CciI | TCATGA | 1 cut(s) | 1537 |
| CfoI | GCGC | 2 cut(s) | 1294, 1561 |
| Cfr13I | GGNCC | 1 cut(s) | 1776 |
| CsiI | ACCWGGT | 1 cut(s) | 94 |
| Csp6I | GTAC | 3 cut(s) | 44, 337, 686 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1455, 1490 |
| CviQI | GTAC | 3 cut(s) | 44, 337, 686 |
| DdeI | CTNAG | 6 cut(s) | 850, 1122, 1212, 1638, 1747, 1899 |
| DpnI | GATC | 5 cut(s) | 408, 713, 1164, 1860, 1892 |
| DpnII | GATC | 5 cut(s) | 406, 711, 1162, 1858, 1890 |
| EaeI | YGGCCR | 1 cut(s) | 1272 |
| Eam1104I | CTCTTC | 3 cut(s) | 346, 951, 1292 |
| EarI | CTCTTC | 3 cut(s) | 346, 951, 1292 |
| Eco130I | CCWWGG | 3 cut(s) | 1059, 1580, 1628 |
| Eco31I | GGTCTC | 2 cut(s) | 1345, 1427 |
| Eco32I | GATATC | 1 cut(s) | 1744 |
| Eco57I | CTGAAG | 2 cut(s) | 1316, 1728 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 197 |
| EcoRI | GAATTC | 2 cut(s) | 1103, 1457 |
| EcoRII | CCWGG | 4 cut(s) | 94, 941, 1114, 1335 |
| EcoRV | GATATC | 1 cut(s) | 1744 |
| EcoT14I | CCWWGG | 3 cut(s) | 1059, 1580, 1628 |
| EcoT22I | ATGCAT | 1 cut(s) | 1454 |
| ErhI | CCWWGG | 3 cut(s) | 1059, 1580, 1628 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 386, 418 |
| FauI | CCCGC | 1 cut(s) | 1411 |
| FauNDI | CATATG | 2 cut(s) | 558, 1192 |
| FbaI | TGATCA | 2 cut(s) | 711, 1890 |
| FblI | GTMKAC | 3 cut(s) | 276, 1252, 1436 |
| Fnu4HI | GCNGC | 3 cut(s) | 887, 1112, 1704 |
| FokI | GGATG | 2 cut(s) | 1805, 1924 |
| Fsp4HI | GCNGC | 3 cut(s) | 887, 1112, 1704 |
| FspBI | CTAG | 4 cut(s) | 350, 416, 971, 1782 |
| FspI | TGCGCA | 1 cut(s) | 1560 |
| GlaI | GCGC | 2 cut(s) | 1293, 1560 |
| GluI | GCNGC | 3 cut(s) | 887, 1112, 1704 |
| GsuI | CTGGAG | 3 cut(s) | 293, 813, 925 |
| HaeIII | GGCC | 2 cut(s) | 1274, 1777 |
| HhaI | GCGC | 2 cut(s) | 1294, 1561 |
| Hin6I | GCGC | 2 cut(s) | 1292, 1559 |
| HinP1I | GCGC | 2 cut(s) | 1292, 1559 |
| HindIII | AAGCTT | 1 cut(s) | 26 |
| HinfI | GANTC | 6 cut(s) | 55, 484, 854, 1300, 1634, 1826 |
| HphI | GGTGA | 5 cut(s) | 214, 746, 1016, 1694, 1777 |
| Hpy166II | GTNNAC | 5 cut(s) | 277, 603, 1007, 1253, 1437 |
| Hpy188I | TCNGA | 4 cut(s) | 826, 1123, 1228, 1900 |
| Hpy188III | TCNNGA | 4 cut(s) | 224, 310, 745, 1538 |
| Hpy8I | GTNNAC | 5 cut(s) | 277, 603, 1007, 1253, 1437 |
| HpyAV | CCTTC | 2 cut(s) | 1378, 1400 |
| HpyCH4III | ACNGT | 4 cut(s) | 666, 1445, 1522, 1690 |
| HpyCH4IV | ACGT | 2 cut(s) | 859, 1722 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 25, 112, 148, 173, 803, 1709 |
| HpyF3I | CTNAG | 6 cut(s) | 850, 1122, 1212, 1638, 1747, 1899 |
| HpySE526I | ACGT | 2 cut(s) | 859, 1722 |
| HspAI | GCGC | 2 cut(s) | 1292, 1559 |
| KpnI | GGTACC | 1 cut(s) | 689 |
| Ksp22I | TGATCA | 2 cut(s) | 711, 1890 |
| Kzo9I | GATC | 5 cut(s) | 406, 711, 1162, 1858, 1890 |
| LmnI | GCTCC | 3 cut(s) | 237, 794, 944 |
| Lsp1109I | GCAGC | 3 cut(s) | 898, 1098, 1690 |
| LweI | GCATC | 5 cut(s) | 1124, 1187, 1318, 1531, 1815 |
| MabI | ACCWGGT | 1 cut(s) | 94 |
| MaeI | CTAG | 4 cut(s) | 350, 416, 971, 1782 |
| MaeII | ACGT | 2 cut(s) | 859, 1722 |
| MaeIII | GTNAC | 3 cut(s) | 634, 734, 1352 |
| MalI | GATC | 5 cut(s) | 408, 713, 1164, 1860, 1892 |
| MboI | GATC | 5 cut(s) | 406, 711, 1162, 1858, 1890 |
| MflI | RGATCY | 2 cut(s) | 406, 1162 |
| MhlI | GDGCHC | 1 cut(s) | 1233 |
| MlsI | TGGCCA | 1 cut(s) | 1274 |
| MluNI | TGGCCA | 1 cut(s) | 1274 |
| MlyI | GAGTC | 1 cut(s) | 1309 |
| MmeI | TCCRAC | 3 cut(s) | 63, 367, 1868 |
| Mox20I | TGGCCA | 1 cut(s) | 1274 |
| Mph1103I | ATGCAT | 1 cut(s) | 1454 |
| MroXI | GAANNNNTTC | 1 cut(s) | 59 |
| MscI | TGGCCA | 1 cut(s) | 1274 |
| MseI | TTAA | 5 cut(s) | 33, 195, 315, 728, 1569 |
| MslI | CAYNNNNRTG | 3 cut(s) | 63, 1191, 1698 |
| Msp20I | TGGCCA | 1 cut(s) | 1274 |
| MspCI | CTTAAG | 1 cut(s) | 32 |
| MspR9I | CCNGG | 4 cut(s) | 96, 943, 1116, 1337 |
| MvaI | CCWGG | 4 cut(s) | 96, 943, 1116, 1337 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 25, 112, 148, 173, 803, 1709 |
| NcoI | CCATGG | 1 cut(s) | 1059 |
| NdeI | CATATG | 2 cut(s) | 558, 1192 |
| NdeII | GATC | 5 cut(s) | 406, 711, 1162, 1858, 1890 |
| NheI | GCTAGC | 1 cut(s) | 415 |
| NlaIV | GGNNCC | 2 cut(s) | 654, 687 |
| NmuCI | GTSAC | 3 cut(s) | 634, 734, 1352 |
| NsbI | TGCGCA | 1 cut(s) | 1560 |
| NsiI | ATGCAT | 1 cut(s) | 1454 |
| NspI | RCATGY | 4 cut(s) | 23, 815, 880, 1242 |
| NspV | TTCGAA | 1 cut(s) | 53 |
| PagI | TCATGA | 1 cut(s) | 1537 |
| PciI | ACATGT | 1 cut(s) | 811 |
| PdmI | GAANNNNTTC | 1 cut(s) | 59 |
| PfeI | GAWTC | 5 cut(s) | 55, 484, 854, 1634, 1826 |
| PfoI | TCCNGGA | 1 cut(s) | 941 |
| PkrI | GCNGC | 3 cut(s) | 888, 1113, 1705 |
| PleI | GAGTC | 1 cut(s) | 1308 |
| PpsI | GAGTC | 1 cut(s) | 1308 |
| Ppu21I | YACGTR | 1 cut(s) | 860 |
| PscI | ACATGT | 1 cut(s) | 811 |
| PshBI | ATTAAT | 1 cut(s) | 728 |
| Psp6I | CCWGG | 4 cut(s) | 94, 941, 1114, 1335 |
| PspGI | CCWGG | 4 cut(s) | 94, 941, 1114, 1335 |
| PspN4I | GGNNCC | 2 cut(s) | 654, 687 |
| PspPI | GGNCC | 1 cut(s) | 1776 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1121 |
| PsuI | RGATCY | 2 cut(s) | 406, 1162 |
| RsaI | GTAC | 3 cut(s) | 45, 338, 687 |
| RsaNI | GTAC | 3 cut(s) | 44, 337, 686 |
| RseI | CAYNNNNRTG | 3 cut(s) | 63, 1191, 1698 |
| SaqAI | TTAA | 5 cut(s) | 33, 195, 315, 728, 1569 |
| SatI | GCNGC | 3 cut(s) | 887, 1112, 1704 |
| Sau3AI | GATC | 5 cut(s) | 406, 711, 1162, 1858, 1890 |
| Sau96I | GGNCC | 1 cut(s) | 1776 |
| SchI | GAGTC | 1 cut(s) | 1309 |
| ScrFI | CCNGG | 4 cut(s) | 96, 943, 1116, 1337 |
| SduI | GDGCHC | 1 cut(s) | 1233 |
| SexAI | ACCWGGT | 1 cut(s) | 94 |
| SfaNI | GCATC | 5 cut(s) | 1124, 1187, 1318, 1531, 1815 |
| SfcI | CTRYAG | 1 cut(s) | 871 |
| SfuI | TTCGAA | 1 cut(s) | 53 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 63, 1191, 1698 |
| SmlI | CTYRAG | 2 cut(s) | 32, 1928 |
| SmoI | CTYRAG | 2 cut(s) | 32, 1928 |
| SsiI | CCGC | 1 cut(s) | 1418 |
| SspMI | CTAG | 4 cut(s) | 350, 416, 971, 1782 |
| StyD4I | CCNGG | 4 cut(s) | 94, 941, 1114, 1335 |
| StyI | CCWWGG | 3 cut(s) | 1059, 1580, 1628 |
| TaaI | ACNGT | 4 cut(s) | 666, 1445, 1522, 1690 |
| TaiI | ACGT | 2 cut(s) | 862, 1725 |
| TaqI | TCGA | 4 cut(s) | 53, 332, 1071, 1132 |
| TatI | WGTACW | 1 cut(s) | 43 |
| TfiI | GAWTC | 5 cut(s) | 55, 484, 854, 1634, 1826 |
| Tru1I | TTAA | 5 cut(s) | 33, 195, 315, 728, 1569 |
| Tru9I | TTAA | 5 cut(s) | 33, 195, 315, 728, 1569 |
| TscAI | CASTG | 3 cut(s) | 669, 796, 1220 |
| TseFI | GTSAC | 3 cut(s) | 634, 734, 1352 |
| TseI | GCWGC | 3 cut(s) | 886, 1111, 1703 |
| Tsp45I | GTSAC | 3 cut(s) | 634, 734, 1352 |
| TspRI | CASTG | 3 cut(s) | 669, 796, 1220 |
| Vha464I | CTTAAG | 1 cut(s) | 32 |
| VspI | ATTAAT | 1 cut(s) | 728 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 197 |
| XapI | RAATTY | 6 cut(s) | 119, 773, 1103, 1127, 1222, 1457 |
| XceI | RCATGY | 4 cut(s) | 23, 815, 880, 1242 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1786 |
| XmiI | GTMKAC | 3 cut(s) | 276, 1252, 1436 |
| XmnI | GAANNNNTTC | 1 cut(s) | 59 |
| XspI | CTAG | 4 cut(s) | 350, 416, 971, 1782 |
| Zsp2I | ATGCAT | 1 cut(s) | 1454 |