Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002109.1

Orthogroup ID

OG0000779

Physical Location & Seq

Genomic Coordinates Forward (+)

25720 .. 28610

Gene Structure 2891 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002109.1_g000009.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1857 bp

atggggccgagagctagagatccaccaccgtatttgtcaacactgccgcgtccacctgacctaactgatttggggatgaagctccaaatttcgaaagaagagacatcggtgtggtgcagtgaacttgagcaaactgcagcgtcgtttcattatgagatattacatgagttgaggcaactgcgtttggagcgaatagctcaggtgatggagccttcggtgccgactttttccgtttcgatcatatctccgccggtgactcaacctgtctctccggtgctgcaatttgggaccatcgattcttacaaacagcaccaacaactatacatgatgccgccaccaccaccattattggccacgtcggatccctaccactaccagcagcaacaacctccacctccgctgtcgtcaagaccaccagtccttcaccagcagcaaaaggtgtggtactcgaaccaaaaccagtacaagtcattacagccgccatcgcctctacaacagtgggtttggccacctcatgctaaccatctacctccctcgctgggctattatcatccaccaccgcctcctcattatgcgcaccattattatcctcaatctctttctcacggacctcctcagtcttattatattcagcagctcaatcgggaatggagagctcagagtccaccgaggttggtgcagcagaagtcgggaactgggttggctgagatgggcccagagatcaactcgttttacttatcaggttcttcatcgattatgagtatgggctcctttcaagtgcaacttattggatgtttgagcacgattgtggaatttgaaattgaaggcattgaagttacaataggtgtgagcttggagaatggatttgatcaaattagccatgatgttgaattgcagtccgagtatgacaaattggagaaagaggaaaaagaacttgaagctgaagattgtgaagttgatgatgatgataaggacgatgaaaggaaaaatgacagcatgatatttaggaactttgtacctgctaaacaattattggaagagctggaacgagaatcgggtactggttcttactcaagtgcagagagttatggcgaccattctctgagttatggtgatgattctcagagagttgataggcagattgtgtcaggctcaggtaaagaagtgaatactaatgaactgagctcgccgctgccgtcatctattcaaacttctccaggattagctcaggcaatggccccaactaaaggtcttgtacgagaagaggaagacatcgacaaaaataggacaggtgaacttacagagcttgatagcctattgactatggtaggaaattacttccaatatgccttacctaagttttataattatggaaaggatattggtggtacatattctgtggtgaatgtttttaatgcattgtgtgcaagacttgagcgttacattgagggttcaaaaaagagtagtcattatgtactgcaactatgcttctctgggtttgataagaagggtcgtgataaaggtggtggccacactcatttagcagatgaactttttaacctgagcaaagagtttgcaaggaatatgaagatacttgggtataagtgggagacaaaagggtctgagaatttgcttatatctgctcatcctctacatgtgaagcttcttatgaatgatattgaagtggtgcatgtgaagaaggcctttgatgaaaaatgggtggcagaaattacaacgaaaattgtcgtggttatggcaaatgcaaggctttacatcactacccatagcaaagtgataattggagtttgtaagaccatgcaactttctaaatatgtgatcagaaactcagttatgtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003924 GO:0004888 GO:0004930 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006605 GO:0006810 GO:0006886 GO:0007154 GO:0007165 GO:0007186 GO:0008104 GO:0008150 GO:0009507 GO:0009526 GO:0009527 GO:0009536 GO:0009707 GO:0009941 GO:0009987 GO:0015031 GO:0015833 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017038 GO:0017111 GO:0019867 GO:0023052 GO:0031090 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0032991 GO:0033036 GO:0033365 GO:0034613 GO:0038023 GO:0042170 GO:0042886 GO:0043021 GO:0043024 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0044877 GO:0045036 GO:0045037 GO:0045184 GO:0046907 GO:0050789 GO:0050794 GO:0050896 GO:0051087 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051716 GO:0055085 GO:0060089 GO:0061927 GO:0065002 GO:0065007 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0072594 GO:0072596 GO:0072598 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AIG1 TOC159_MAD

Protein Analysis

618

Amino Acids

69.85

Weight (kDa)

5.58

Isoelectric Point (pI)

55.29

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000779)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g29862
rosa_chinensis	RchiOBHm_Chr1g0313641 RchiOBHm_Chr4g0408161 RchiOBHm_Chr4g0408171 RchiOBHm_Chr4g0437611 RchiOBHm_Chr4g0437621 RchiOBHm_Chr4g0444671 RchiOBHm_Chr5g0045021 RchiOBHm_Chr5g0070121 RchiOBHm_Chr5g0082551 RchiOBHm_Chr6g0247501 RchiOBHm_Chr6g0271311 RchiOBHm_Chr6g0290811 RchiOBHm_Chr6g0310571
rosa_laevigata	RLG00000004718 RLG00000008552 RLG00000015595
rosa_multiflora	Rmu_co8342433.1_g000001 Rmu_sc0000147.1_g000080 Rmu_sc0000391.1_g000018 Rmu_sc0000753.1_g000021 Rmu_sc0000870.1_g000071 Rmu_sc0000870.1_g000072 Rmu_sc0001648.1_g000026 Rmu_sc0001648.1_g000043 Rmu_sc0001972.1_g000009 Rmu_sc0002109.1_g000009 Rmu_sc0003340.1_g000008 Rmu_sc0003340.1_g000009 Rmu_sc0004874.1_g000014 Rmu_sc0005823.1_g000009 Rmu_sc0005941.1_g000006 Rmu_sc0009850.1_g000015 Rmu_sc0015511.1_g000012
rosa_roxburghii	Rroxscaffold_1G00034320 Rroxscaffold_1G00036130 Rroxscaffold_1G00043440 Rroxscaffold_1G00043450 Rroxscaffold_1G00050660 Rroxscaffold_1G00050670 Rroxscaffold_1G00066940 Rroxscaffold_2G00094100 Rroxscaffold_2G00120240 Rroxscaffold_4G00287900 Rroxscaffold_4G00287910 Rroxscaffold_4G00290700 Rroxscaffold_4G00290710 Rroxscaffold_4G00298640 Rroxscaffold_4G00308540 Rroxscaffold_5G00369420 Rroxscaffold_7G00217900
rosa_rugosa	Rorug06G0077100
rosa_samantha	Rh1AG005600 Rh1AG005700 Rh1BG433000 Rh1DG003900 Rh2CG286600 Rh3AG243900 Rh3BG368800 Rh5AG301800 Rh5BG309500 Rh5CG501500 Rh5CG501600 Rh5DG320200 Rh6AG179500 Rh6CG338800 Rh6CG405000 Rh6DG092100 Rh7AG294100 Rh7CG239600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1365
AasI	GACNNNNNNGTC	1 cut(s)	1618
Acc16I	TGCGCA	1 cut(s)	576
Acc36I	ACCTGC	1 cut(s)	1027
AccB1I	GGYRCC	1 cut(s)	217
AccII	CGCG	1 cut(s)	49
AciI	CCGC	7 cut(s)	47, 248, 332, 398, 479, 560, 1190
AclWI	GGATC	3 cut(s)	14, 356, 369
AcoI	YGGCCR	3 cut(s)	351, 506, 1528
AcsI	RAATTY	3 cut(s)	87, 812, 1627
AcuI	CTGAAG	1 cut(s)	963
AfaI	GTAC	7 cut(s)	446, 464, 1017, 1060, 1257, 1390, 1476
AfiI	CCNNNNNNNGG	2 cut(s)	539, 1247
AflIII	ACRYGT	1 cut(s)	1654
AgsI	TTSAA	9 cut(s)	776, 818, 824, 833, 890, 938, 1208, 1455, 1682
AhdI	GACNNNNNGTC	1 cut(s)	416
AjiI	CACGTC	1 cut(s)	357
AjnI	CCWGG	1 cut(s)	1216
AleI	CACNNNNGTG	1 cut(s)	806
Alw21I	GWGCWC	3 cut(s)	658, 803, 1187
Alw26I	GTCTC	3 cut(s)	95, 271, 1604
AlwI	GGATC	3 cut(s)	14, 356, 369
AoxI	GGCC	7 cut(s)	5, 351, 506, 712, 1236, 1528, 1701
ApaI	GGGCCC	1 cut(s)	716
ApeKI	GCWGC	7 cut(s)	137, 277, 379, 430, 634, 679, 1192
ApoI	RAATTY	3 cut(s)	87, 812, 1627
AspLEI	GCGC	1 cut(s)	577
AspS9I	GGNCC	6 cut(s)	5, 288, 608, 712, 713, 1237
AsuHPI	GGTGA	6 cut(s)	214, 265, 416, 1124, 1304, 1414
AsuII	TTCGAA	1 cut(s)	92
AvaII	GGWCC	2 cut(s)	288, 608
BaeGI	GKGCMC	1 cut(s)	716
BaeI	ACNNNNGTAYC	2 cut(s)	1583, 1616
BalI	TGGCCA	3 cut(s)	353, 508, 1530
BamHI	GGATCC	1 cut(s)	361
BanI	GGYRCC	1 cut(s)	217
BanII	GRGCYC	4 cut(s)	658, 716, 770, 1187
BbsI	GAAGAC	1 cut(s)	1275
Bbv12I	GWGCWC	3 cut(s)	658, 803, 1187
BbvI	GCAGC	7 cut(s)	149, 264, 391, 442, 646, 691, 1179
BccI	CCATC	5 cut(s)	199, 299, 490, 531, 703
BceAI	ACGGC	1 cut(s)	1180
BcgI	CGANNNNNNTGC	4 cut(s)	623, 657, 658, 692
BciT130I	CCWGG	1 cut(s)	1218
BclI	TGATCA	2 cut(s)	868, 1836
BcoDI	GTCTC	3 cut(s)	95, 271, 1604
BfaI	CTAG	1 cut(s)	15
BfmI	CTRYAG	1 cut(s)	135
BfuAI	ACCTGC	1 cut(s)	1027
Bme1390I	CCNGG	1 cut(s)	1218
Bme18I	GGWCC	2 cut(s)	288, 608
BmeRI	GACNNNNNGTC	1 cut(s)	416
BmgBI	CACGTC	1 cut(s)	357
BmgT120I	GGNCC	6 cut(s)	5, 288, 608, 712, 713, 1237
BmiI	GGNNCC	8 cut(s)	6, 210, 219, 289, 363, 714, 769, 1239
BmrFI	CCNGG	1 cut(s)	1218
BmrI	ACTGGG	1 cut(s)	705
BmsI	GCATC	1 cut(s)	318
BmuI	ACTGGG	1 cut(s)	705
BpiI	GAAGAC	1 cut(s)	1275
BplI	GAGNNNNNCTC	2 cut(s)	710, 742
BpmI	CTGGAG	1 cut(s)	1200
Bpu10I	CCTNAGC	4 cut(s)	198, 1153, 1227, 1562
Bpu14I	TTCGAA	1 cut(s)	92
BpuEI	CTTGAG	3 cut(s)	146, 1057, 1454
Bsa29I	ATCGAT	2 cut(s)	294, 752
BsaJI	CCNNGG	1 cut(s)	668
BsaWI	WCCGGW	1 cut(s)	271
Bsc4I	CCNNNNNNNGG	2 cut(s)	539, 1247
Bse118I	RCCGGY	1 cut(s)	250
Bse1I	ACTGG	4 cut(s)	416, 460, 700, 1066
Bse3DI	GCAATG	1 cut(s)	1239
BseBI	CCWGG	1 cut(s)	1218
BseCI	ATCGAT	2 cut(s)	294, 752
BseDI	CCNNGG	1 cut(s)	668
BseGI	GGATG	4 cut(s)	81, 550, 797, 1645
BseLI	CCNNNNNNNGG	2 cut(s)	539, 1247
BseMI	GCAATG	1 cut(s)	1239
BseNI	ACTGG	4 cut(s)	416, 460, 700, 1066
BseRI	GAGGAG	2 cut(s)	555, 603
BseSI	GKGCMC	1 cut(s)	716
BseXI	GCAGC	7 cut(s)	149, 264, 391, 442, 646, 691, 1179
BseYI	CCCAGC	1 cut(s)	538
BsgI	GTGCAG	3 cut(s)	136, 698, 1098
Bsh1236I	CGCG	1 cut(s)	49
BshFI	GGCC	7 cut(s)	7, 353, 508, 714, 1238, 1530, 1703
BshNI	GGYRCC	1 cut(s)	217
BshVI	ATCGAT	2 cut(s)	294, 752
BsiHKAI	GWGCWC	3 cut(s)	658, 803, 1187
BsiSI	CCGG	2 cut(s)	251, 272
BslFI	GGGAC	1 cut(s)	301
BslI	CCNNNNNNNGG	2 cut(s)	539, 1247
BsmAI	GTCTC	3 cut(s)	95, 271, 1604
BsmFI	GGGAC	1 cut(s)	301
BsnI	GGCC	7 cut(s)	7, 353, 508, 714, 1238, 1530, 1703
Bsp119I	TTCGAA	1 cut(s)	92
Bsp120I	GGGCCC	1 cut(s)	712
Bsp1286I	GDGCHC	5 cut(s)	658, 716, 770, 803, 1187
Bsp143I	GATC	6 cut(s)	19, 237, 361, 720, 868, 1836
BspACI	CCGC	7 cut(s)	47, 248, 332, 398, 479, 560, 1190
BspANI	GGCC	7 cut(s)	7, 353, 508, 714, 1238, 1530, 1703
BspDI	ATCGAT	2 cut(s)	294, 752
BspFNI	CGCG	1 cut(s)	49
BspLI	GGNNCC	8 cut(s)	6, 210, 219, 289, 363, 714, 769, 1239
BspMAI	CTGCAG	1 cut(s)	139
BspMI	ACCTGC	1 cut(s)	1027
BspPI	GGATC	3 cut(s)	14, 356, 369
BspQI	GCTCTTC	1 cut(s)	1032
BspT104I	TTCGAA	1 cut(s)	92
BspT107I	GGYRCC	1 cut(s)	217
BsrDI	GCAATG	1 cut(s)	1239
BsrFI	RCCGGY	1 cut(s)	250
BsrI	ACTGG	4 cut(s)	416, 460, 700, 1066
BssAI	RCCGGY	1 cut(s)	250
BssECI	CCNNGG	1 cut(s)	668
BssMI	GATC	6 cut(s)	19, 237, 361, 720, 868, 1836
Bst2UI	CCWGG	1 cut(s)	1218
Bst4CI	ACNGT	2 cut(s)	30, 498
Bst6I	CTCTTC	3 cut(s)	93, 1032, 1257
BstAPI	GCANNNNNTGC	1 cut(s)	1424
BstBI	TTCGAA	1 cut(s)	92
BstC8I	GCNNGC	1 cut(s)	1187
BstF5I	GGATG	4 cut(s)	81, 550, 797, 1645
BstFNI	CGCG	1 cut(s)	49
BstHHI	GCGC	1 cut(s)	577
BstKTI	GATC	6 cut(s)	22, 240, 364, 723, 871, 1839
BstMAI	GTCTC	3 cut(s)	95, 271, 1604
BstMBI	GATC	6 cut(s)	19, 237, 361, 720, 868, 1836
BstMWI	GCNNNNNNNGC	4 cut(s)	187, 217, 484, 1424
BstNI	CCWGG	1 cut(s)	1218
BstNSI	RCATGY	2 cut(s)	1658, 1694
BstSCI	CCNGG	1 cut(s)	1216
BstSFI	CTRYAG	1 cut(s)	135
BstSLI	GKGCMC	1 cut(s)	716
BstUI	CGCG	1 cut(s)	49
BstV1I	GCAGC	7 cut(s)	149, 264, 391, 442, 646, 691, 1179
BstV2I	GAAGAC	1 cut(s)	1275
BstX2I	RGATCY	2 cut(s)	19, 361
BstYI	RGATCY	2 cut(s)	19, 361
Bsu15I	ATCGAT	2 cut(s)	294, 752
BsuRI	GGCC	7 cut(s)	7, 353, 508, 714, 1238, 1530, 1703
BsuTUI	ATCGAT	2 cut(s)	294, 752
BtgZI	GCGATG	1 cut(s)	468
BtrI	CACGTC	1 cut(s)	357
BtsCI	GGATG	4 cut(s)	81, 550, 797, 1645
BtsI	GCAGTG	2 cut(s)	41, 124
BtsIMutI	CAGTG	3 cut(s)	41, 124, 503
BveI	ACCTGC	1 cut(s)	1027
Cac8I	GCNNGC	1 cut(s)	1187
CfoI	GCGC	1 cut(s)	577
Cfr10I	RCCGGY	1 cut(s)	250
Cfr13I	GGNCC	6 cut(s)	5, 288, 608, 712, 713, 1237
ClaI	ATCGAT	2 cut(s)	294, 752
CseI	GACGC	2 cut(s)	38, 129
Csp6I	GTAC	7 cut(s)	445, 463, 1016, 1059, 1256, 1389, 1475
CspCI	CAANNNNNGTGG	8 cut(s)	15, 50, 330, 365, 422, 457, 654, 689
CviAII	CATG	8 cut(s)	164, 325, 515, 881, 997, 1655, 1691, 1816
CviQI	GTAC	7 cut(s)	445, 463, 1016, 1059, 1256, 1389, 1475
DpnI	GATC	6 cut(s)	21, 239, 363, 722, 870, 1838
DpnII	GATC	6 cut(s)	19, 237, 361, 720, 868, 1836
DrdI	GACNNNNNNGTC	1 cut(s)	1618
DriI	GACNNNNNGTC	1 cut(s)	416
DseDI	GACNNNNNNGTC	1 cut(s)	1618
EaeI	YGGCCR	3 cut(s)	351, 506, 1528
Eam1104I	CTCTTC	3 cut(s)	93, 1032, 1257
Eam1105I	GACNNNNNGTC	1 cut(s)	416
EarI	CTCTTC	3 cut(s)	93, 1032, 1257
EciI	GGCGGA	1 cut(s)	237
Ecl136II	GAGCTC	2 cut(s)	656, 1185
Eco147I	AGGCCT	1 cut(s)	1703
Eco24I	GRGCYC	4 cut(s)	658, 716, 770, 1187
Eco47I	GGWCC	2 cut(s)	288, 608
Eco53kI	GAGCTC	2 cut(s)	656, 1185
Eco57I	CTGAAG	1 cut(s)	963
EcoICRI	GAGCTC	2 cut(s)	656, 1185
EcoRII	CCWGG	1 cut(s)	1216
EcoT22I	ATGCAT	1 cut(s)	1420
EcoT38I	GRGCYC	4 cut(s)	658, 716, 770, 1187
FaeI	CATG	8 cut(s)	167, 328, 518, 884, 1000, 1658, 1694, 1819
FalI	AAGNNNNNCTT	4 cut(s)	768, 800, 1688, 1720
FaqI	GGGAC	1 cut(s)	301
FatI	CATG	8 cut(s)	163, 324, 514, 880, 996, 1654, 1690, 1815
FbaI	TGATCA	2 cut(s)	868, 1836
FokI	GGATG	4 cut(s)	88, 537, 804, 1632
FriOI	GRGCYC	4 cut(s)	658, 716, 770, 1187
FspAI	RTGCGCAY	1 cut(s)	576
FspBI	CTAG	1 cut(s)	15
FspI	TGCGCA	1 cut(s)	576
GlaI	GCGC	1 cut(s)	576
GsaI	CCCAGC	1 cut(s)	542
GsuI	CTGGAG	1 cut(s)	1200
HaeIII	GGCC	7 cut(s)	7, 353, 508, 714, 1238, 1530, 1703
HapII	CCGG	2 cut(s)	251, 272
HgaI	GACGC	2 cut(s)	38, 129
HhaI	GCGC	1 cut(s)	577
Hin1II	CATG	8 cut(s)	167, 328, 518, 884, 1000, 1658, 1694, 1819
Hin6I	GCGC	1 cut(s)	575
HinP1I	GCGC	1 cut(s)	575
HincII	GTYRAC	1 cut(s)	39
HindII	GTYRAC	1 cut(s)	39
HindIII	AAGCTT	1 cut(s)	1661
HinfI	GANTC	5 cut(s)	256, 296, 661, 1052, 1118
HpaII	CCGG	2 cut(s)	251, 272
HphI	GGTGA	6 cut(s)	214, 265, 416, 1124, 1304, 1414
Hpy166II	GTNNAC	5 cut(s)	39, 53, 122, 665, 1295
Hpy188I	TCNGA	7 cut(s)	361, 660, 901, 1104, 1125, 1624, 1841
Hpy188III	TCNNGA	4 cut(s)	408, 644, 690, 1514
Hpy8I	GTNNAC	5 cut(s)	39, 53, 122, 665, 1295
Hpy99I	CGWCG	2 cut(s)	145, 361
HpyAV	CCTTC	5 cut(s)	222, 431, 818, 1501, 1693
HpyCH4III	ACNGT	2 cut(s)	30, 498
HpyCH4IV	ACGT	1 cut(s)	356
HpyF10VI	GCNNNNNNNGC	4 cut(s)	187, 217, 484, 1424
HpySE526I	ACGT	1 cut(s)	356
Hsp92II	CATG	8 cut(s)	167, 328, 518, 884, 1000, 1658, 1694, 1819
HspAI	GCGC	1 cut(s)	575
Ksp22I	TGATCA	2 cut(s)	868, 1836
Kzo9I	GATC	6 cut(s)	19, 237, 361, 720, 868, 1836
LguI	GCTCTTC	1 cut(s)	1032
LmnI	GCTCC	4 cut(s)	87, 187, 208, 773
Lsp1109I	GCAGC	7 cut(s)	149, 264, 391, 442, 646, 691, 1179
LweI	GCATC	1 cut(s)	318
MaeI	CTAG	1 cut(s)	15
MaeII	ACGT	1 cut(s)	356
MaeIII	GTNAC	3 cut(s)	253, 835, 1439
MalI	GATC	6 cut(s)	21, 239, 363, 722, 870, 1838
MboI	GATC	6 cut(s)	19, 237, 361, 720, 868, 1836
MboII	GAAGA	8 cut(s)	110, 738, 956, 1049, 1274, 1280, 1600, 1708
MflI	RGATCY	2 cut(s)	19, 361
MhlI	GDGCHC	5 cut(s)	658, 716, 770, 803, 1187
MlsI	TGGCCA	3 cut(s)	353, 508, 1530
MluNI	TGGCCA	3 cut(s)	353, 508, 1530
MlyI	GAGTC	2 cut(s)	250, 670
MmeI	TCCRAC	1 cut(s)	339
Mox20I	TGGCCA	3 cut(s)	353, 508, 1530
Mph1103I	ATGCAT	1 cut(s)	1420
MscI	TGGCCA	3 cut(s)	353, 508, 1530
MseI	TTAA	2 cut(s)	1413, 1557
MslI	CAYNNNNRTG	2 cut(s)	109, 806
Msp20I	TGGCCA	3 cut(s)	353, 508, 1530
MspA1I	CMGCKG	2 cut(s)	400, 1192
MspI	CCGG	2 cut(s)	251, 272
MspR9I	CCNGG	1 cut(s)	1218
MvaI	CCWGG	1 cut(s)	1218
MvnI	CGCG	1 cut(s)	49
MwoI	GCNNNNNNNGC	4 cut(s)	187, 217, 484, 1424
NdeII	GATC	6 cut(s)	19, 237, 361, 720, 868, 1836
NlaIII	CATG	8 cut(s)	167, 328, 518, 884, 1000, 1658, 1694, 1819
NlaIV	GGNNCC	8 cut(s)	6, 210, 219, 289, 363, 714, 769, 1239
NmeAIII	GCCGAG	1 cut(s)	33
NmuCI	GTSAC	1 cut(s)	253
NsbI	TGCGCA	1 cut(s)	576
NsiI	ATGCAT	1 cut(s)	1420
NspI	RCATGY	2 cut(s)	1658, 1694
NspV	TTCGAA	1 cut(s)	92
OliI	CACNNNNGTG	1 cut(s)	806
PceI	AGGCCT	1 cut(s)	1703
PciI	ACATGT	1 cut(s)	1654
PciSI	GCTCTTC	1 cut(s)	1032
PcsI	WCGNNNNNNNCGW	1 cut(s)	1193
PfeI	GAWTC	3 cut(s)	296, 1052, 1118
PfoI	TCCNGGA	1 cut(s)	1216
PleI	GAGTC	2 cut(s)	250, 669
PpsI	GAGTC	2 cut(s)	250, 669
PscI	ACATGT	1 cut(s)	1654
PsiI	TTATAA	1 cut(s)	1365
Psp124BI	GAGCTC	2 cut(s)	658, 1187
Psp6I	CCWGG	1 cut(s)	1216
PspFI	CCCAGC	1 cut(s)	538
PspGI	CCWGG	1 cut(s)	1216
PspN4I	GGNNCC	8 cut(s)	6, 210, 219, 289, 363, 714, 769, 1239
PspOMI	GGGCCC	1 cut(s)	712
PspPI	GGNCC	6 cut(s)	5, 288, 608, 712, 713, 1237
PstI	CTGCAG	1 cut(s)	139
PsuI	RGATCY	2 cut(s)	19, 361
RsaI	GTAC	7 cut(s)	446, 464, 1017, 1060, 1257, 1390, 1476
RsaNI	GTAC	7 cut(s)	445, 463, 1016, 1059, 1256, 1389, 1475
RseI	CAYNNNNRTG	2 cut(s)	109, 806
SacI	GAGCTC	2 cut(s)	658, 1187
SapI	GCTCTTC	1 cut(s)	1032
SaqAI	TTAA	2 cut(s)	1413, 1557
Sau3AI	GATC	6 cut(s)	19, 237, 361, 720, 868, 1836
Sau96I	GGNCC	6 cut(s)	5, 288, 608, 712, 713, 1237
SchI	GAGTC	2 cut(s)	250, 670
ScrFI	CCNGG	1 cut(s)	1218
SduI	GDGCHC	5 cut(s)	658, 716, 770, 803, 1187
SfaNI	GCATC	1 cut(s)	318
SfcI	CTRYAG	1 cut(s)	135
SfuI	TTCGAA	1 cut(s)	92
SgrAI	CRCCGGYG	1 cut(s)	250
SinI	GGWCC	2 cut(s)	288, 608
SmiMI	CAYNNNNRTG	2 cut(s)	109, 806
SmlI	CTYRAG	3 cut(s)	125, 1072, 1433
SmoI	CTYRAG	3 cut(s)	125, 1072, 1433
SseBI	AGGCCT	1 cut(s)	1703
SsiI	CCGC	7 cut(s)	47, 248, 332, 398, 479, 560, 1190
SspMI	CTAG	1 cut(s)	15
SstI	GAGCTC	2 cut(s)	658, 1187
StuI	AGGCCT	1 cut(s)	1703
StyD4I	CCNGG	1 cut(s)	1216
TaaI	ACNGT	2 cut(s)	30, 498
TaiI	ACGT	1 cut(s)	359
TaqI	TCGA	6 cut(s)	92, 236, 294, 449, 752, 1275
TatI	WGTACW	2 cut(s)	462, 1474
TauI	GCSGC	4 cut(s)	49, 334, 481, 1192
TfiI	GAWTC	3 cut(s)	296, 1052, 1118
Tru1I	TTAA	2 cut(s)	1413, 1557
Tru9I	TTAA	2 cut(s)	1413, 1557
TscAI	CASTG	3 cut(s)	48, 124, 503
TseFI	GTSAC	1 cut(s)	253
TseI	GCWGC	7 cut(s)	137, 277, 379, 430, 634, 679, 1192
Tsp45I	GTSAC	1 cut(s)	253
TspDTI	ATGAA	9 cut(s)	92, 137, 738, 993, 1191, 1563, 1601, 1685, 1725
TspGWI	ACGGA	2 cut(s)	220, 621
TspRI	CASTG	3 cut(s)	48, 124, 503
VpaK11BI	GGWCC	2 cut(s)	288, 608
XapI	RAATTY	3 cut(s)	87, 812, 1627
XceI	RCATGY	2 cut(s)	1658, 1694
XspI	CTAG	1 cut(s)	15
Zsp2I	ATGCAT	1 cut(s)	1420

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.