RchiOBHm_Chr4g0437621

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0000779
Physical Location & Seq
Forward (+)
60600430 .. 60602938
2509 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ40586

Sequence Viewer

Length: 2244 bp
ATGATTGGTTTTCCTGAAGGACATGAATCTTATGGTAAATCCAAGGAGTCTTTACAAGTGAACTTTGATACTAGTGATGCAGGTATAGATCAAGCTACCCACTCAATTGGTCCGGATGATAAAGAAAAAGATGGAAATTGTGATGGGAGTGGAGAGTCTGGAAACCGCAGCAGAAAGGGACCCATAGAAGAAAACTTATACAAAGATGATGATGCCAGTGATTTTGGGAAGATTTTTGCTGGTATACCTGAAGTTAGTGTTTTTTATTGGAATGTCAATTTGATTGCAGCTTGTGTCCGGTTTGGTGACAAAAAAAGTGGCCGTCAAATGTTTGATAACATCCTTTGCTCAAATGTGATTTCATGGGATGCCATACTCTCTGACTATTTCCAGAATGAAGACCACATGGAGGTAAAGCATATATTTCATAATATGCAAGGATTGGATGTCTATTGGAACGCTACGATAGCAGGTCTTTTAGTCAATTCTCAAGATAAGGAAGCTTTCACGTACTCTAAGAAAGTGAGGCAACATGAGATGCTTCCCACGCAATTCTCTTATGCTCCTATACTGAGTTGTTGCTCCAAGCTAGCTTCTTCATTTCAAGAGAGACAGAGCACTGCTTCACTGACATTAATGAAAATTTTACTTGCTAAAGTGTTTGAAATGGAAACTGATGGTGGGTTCGCAAACAATTTGGAGAAGATGTGTTTGTTTATTGCTCGTAGGTTTGAGATAATGGAAGGAAATGCACCAATATCTTGGAAGGATATGGAAACCAATTTGTTTGCTCTTAGTGTGGTCGTTGAGGTACACCTACAGGAAAGCCAAATCTTGGATTTTTCGGTCATTATGCAGTTGGTGATGATTTTGTCCACTAGGCCTTTGGATGAACTGAAGGGCATCATGTGTATTAATGTGCATAGTTCTCTTGGAGACATTGATGACTCCTATTCTAAGTGCATCTCTGTTTTTCAAACAATTGCTAGACCCTTACTGTTATTTCTTGCTGCTACCTTGCTTCTAAATAATGTGGAACGAGATGAGAATTTAATTGCAGCTCTTGCGTCATCTCTTGGGAAAGATTGTAGTGGTTGCATTAAAATTGGTGAGCTTGATCAGTCTTGCAAGAACATTTATCTATGTCATGAGCAATTCAAAGCATTGGTAAGGTCAAACTTGTACATCTGCAAATGGTTTGGGTTATCAGTGATATGCGTACAGGGGCTTACATTGTTATTGGCCATAATACTCAAAGCTATTGGGCTATGTCATTATTATGATGGTGATGATGATTATATTCTTGAGAGGTTTTCACTTCTGAATTACTCGCCTCATGGTGTCTTTAGCATCACTACTGATGGGTCCAAAAATGATGCTTGGCATGTACTGATGATCATTTTTGGGGATTATTTGTGGACTATGTCTGATCAACCTAAAGACAATATTCTTATTGGAGATATTGAACTACCTAGAGTACTTGCAATTTTTATCAGTGCATTGGTCCTAGGTGGAACTAATGATCAATTATTCTGGTATTACAAGTCAAAGATCATGAAGTATCTCAAGGAATTGGCTAAAGTCTTTGACATTAAGAGTCAATTGGAGACTCTGGTGGATTATCAAGTGCGGCCACCACAAAAGAAAATATGCTCCAGCTTTATGGTTGACTTTATTCTACTGCCCTTTACATCATCTTTTTGTAGCTTACACTTGCAGTTGGATGCTAAACGGGTTAAGACTTCACAGCATAGTCCTACCTTGTATCGCATTGCAGAAATACGTGTGAAGAATCTCAAGGTTCTGGCGATTGAGAAGTACTTGAGGGATGCAATTGAGTCATGGTTAGATGGAATTCTTGGTGAAAATGGTTCTTATGAGATTAAATGGGGTGGCAATTTTACTAAACAAGGATCATTGGATTATGGTGCAGACTTCGGGTTTGGACTTTACATTGATCACCATTATTACTTGGGTTACTTTCTGTATGGCATTTCAGTGCTTGCTAAGATTGAACTGGAATGGGGGATGAGGTATAAGCCTCAAGTTGATTCACTTGCTGCAGATTCCATGAACTTAGACAAGAGGACAGGTTTCCATTATTCACTGGGCAGATTATTTCTTAAACTTGAGGTCAAGTTTCAATTGAAGAGGGGTGGTGTTGTTAGGACCCAATTCTATGATCTCCAAGTCCAAGTGTGTATCGAGGCCCATAATAGCTCTTTTGGCTGTGAAAGCCCATAG

Protein Analysis

747

Amino Acids

84.5

Weight (kDa)

5.48

Isoelectric Point (pI)

38.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro81C PF17652 589 - 697 7e-20 Glycosyl hydrolase family 81 C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000779)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g29862
rosa_chinensis RchiOBHm_Chr1g0313641 RchiOBHm_Chr4g0408161 RchiOBHm_Chr4g0408171 RchiOBHm_Chr4g0437611 RchiOBHm_Chr4g0437621 RchiOBHm_Chr4g0444671 RchiOBHm_Chr5g0045021 RchiOBHm_Chr5g0070121 RchiOBHm_Chr5g0082551 RchiOBHm_Chr6g0247501 RchiOBHm_Chr6g0271311 RchiOBHm_Chr6g0290811 RchiOBHm_Chr6g0310571
rosa_laevigata RLG00000004718 RLG00000008552 RLG00000015595
rosa_multiflora Rmu_co8342433.1_g000001 Rmu_sc0000147.1_g000080 Rmu_sc0000391.1_g000018 Rmu_sc0000753.1_g000021 Rmu_sc0000870.1_g000071 Rmu_sc0000870.1_g000072 Rmu_sc0001648.1_g000026 Rmu_sc0001648.1_g000043 Rmu_sc0001972.1_g000009 Rmu_sc0002109.1_g000009 Rmu_sc0003340.1_g000008 Rmu_sc0003340.1_g000009 Rmu_sc0004874.1_g000014 Rmu_sc0005823.1_g000009 Rmu_sc0005941.1_g000006 Rmu_sc0009850.1_g000015 Rmu_sc0015511.1_g000012
rosa_roxburghii Rroxscaffold_1G00034320 Rroxscaffold_1G00036130 Rroxscaffold_1G00043440 Rroxscaffold_1G00043450 Rroxscaffold_1G00050660 Rroxscaffold_1G00050670 Rroxscaffold_1G00066940 Rroxscaffold_2G00094100 Rroxscaffold_2G00120240 Rroxscaffold_4G00287900 Rroxscaffold_4G00287910 Rroxscaffold_4G00290700 Rroxscaffold_4G00290710 Rroxscaffold_4G00298640 Rroxscaffold_4G00308540 Rroxscaffold_5G00369420 Rroxscaffold_7G00217900
rosa_rugosa Rorug06G0077100
rosa_samantha Rh1AG005600 Rh1AG005700 Rh1BG433000 Rh1DG003900 Rh2CG286600 Rh3AG243900 Rh3BG368800 Rh5AG301800 Rh5BG309500 Rh5CG501500 Rh5CG501600 Rh5DG320200 Rh6AG179500 Rh6CG338800 Rh6CG405000 Rh6DG092100 Rh7AG294100 Rh7CG239600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 71, 461
AccB7I CCANNNNNTGG 1 cut(s) 835
AccI GTMKAC 1 cut(s) 244
AccIII TCCGGA 1 cut(s) 112
AciI CCGC 2 cut(s) 166, 1630
AclWI GGATC 1 cut(s) 1921
AcoI YGGCCR 3 cut(s) 319, 1242, 1631
AcsI RAATTY 3 cut(s) 642, 1048, 1854
AcuI CTGAAG 3 cut(s) 36, 270, 917
AfaI GTAC 7 cut(s) 512, 813, 1184, 1221, 1389, 1479, 1820
AfiI CCNNNNNNNGG 2 cut(s) 409, 835
AflIII ACRYGT 1 cut(s) 1783
AgsI TTSAA 8 cut(s) 605, 665, 977, 1159, 1466, 2015, 2144, 2149
AhlI ACTAGT 1 cut(s) 71
Alw21I GWGCWC 1 cut(s) 620
Alw26I GTCTC 3 cut(s) 604, 930, 1601
AlwI GGATC 1 cut(s) 1921
Aor13HI TCCGGA 1 cut(s) 112
AoxI GGCC 5 cut(s) 319, 881, 1242, 1631, 2208
ApeKI GCWGC 5 cut(s) 168, 287, 1010, 1058, 2060
ApoI RAATTY 3 cut(s) 642, 1048, 1854
ArsI GACNNNNNNTTYG 2 cut(s) 1925, 1957
AseI ATTAAT 2 cut(s) 635, 915
AspA2I CCTAGG 1 cut(s) 1507
AspS9I GGNCC 6 cut(s) 110, 179, 1365, 1504, 2169, 2209
AsuHPI GGTGA 6 cut(s) 317, 874, 1121, 1298, 1874, 1952
AsuNHI GCTAGC 1 cut(s) 589
AvaII GGWCC 5 cut(s) 110, 179, 1365, 1504, 2169
AvrII CCTAGG 1 cut(s) 1507
BalI TGGCCA 1 cut(s) 1244
BbsI GAAGAC 1 cut(s) 405
Bbv12I GWGCWC 1 cut(s) 620
BbvI GCAGC 5 cut(s) 180, 299, 997, 1070, 2047
BccI CCATC 6 cut(s) 125, 137, 671, 1277, 1355, 1844
BceAI ACGGC 1 cut(s) 306
BclI TGATCA 5 cut(s) 1117, 1395, 1429, 1522, 1957
BcoDI GTCTC 3 cut(s) 604, 930, 1601
BcuI ACTAGT 1 cut(s) 71
BfaI CTAG 6 cut(s) 72, 590, 879, 987, 1473, 1508
BfmI CTRYAG 2 cut(s) 818, 2061
BfuAI ACCTGC 2 cut(s) 71, 461
BisI GCNGC 6 cut(s) 169, 288, 1011, 1059, 1631, 2061
BlnI CCTAGG 1 cut(s) 1507
BlsI GCNGC 6 cut(s) 170, 289, 1012, 1060, 1632, 2062
BmcAI AGTACT 2 cut(s) 1479, 1820
Bme18I GGWCC 5 cut(s) 110, 179, 1365, 1504, 2169
BmgT120I GGNCC 6 cut(s) 110, 179, 1365, 1504, 2169, 2209
BmiI GGNNCC 4 cut(s) 180, 181, 1366, 2171
BmrI ACTGGG 1 cut(s) 2117
BmtI GCTAGC 1 cut(s) 593
BmuI ACTGGG 1 cut(s) 2117
BpiI GAAGAC 1 cut(s) 405
BpmI CTGGAG 1 cut(s) 1639
BpuEI CTTGAG 7 cut(s) 474, 1325, 1550, 1781, 1843, 2028, 2150
BsaAI YACGTR 2 cut(s) 510, 1784
BsaJI CCNNGG 2 cut(s) 42, 1507
BsaWI WCCGGW 2 cut(s) 112, 297
BsaXI ACNNNNNCTCC 2 cut(s) 692, 722
Bsc4I CCNNNNNNNGG 2 cut(s) 409, 835
Bse1I ACTGG 3 cut(s) 216, 2022, 2112
Bse3DI GCAATG 1 cut(s) 1770
BseAI TCCGGA 1 cut(s) 112
BseDI CCNNGG 2 cut(s) 42, 1507
BseGI GGATG 8 cut(s) 121, 339, 373, 451, 895, 1729, 1834, 2034
BseLI CCNNNNNNNGG 2 cut(s) 409, 835
BseMI GCAATG 1 cut(s) 1770
BseMII CTCAG 1 cut(s) 563
BseNI ACTGG 3 cut(s) 216, 2022, 2112
BseXI GCAGC 5 cut(s) 180, 299, 997, 1070, 2047
BsgI GTGCAG 1 cut(s) 1950
BshFI GGCC 5 cut(s) 321, 883, 1244, 1633, 2210
BsiHKAI GWGCWC 1 cut(s) 620
BsiSI CCGG 2 cut(s) 113, 298
BslFI GGGAC 1 cut(s) 192
BslI CCNNNNNNNGG 2 cut(s) 409, 835
BsmAI GTCTC 3 cut(s) 604, 930, 1601
BsmFI GGGAC 1 cut(s) 192
BsnI GGCC 5 cut(s) 321, 883, 1244, 1633, 2210
Bsp1286I GDGCHC 1 cut(s) 620
Bsp13I TCCGGA 1 cut(s) 112
Bsp1407I TGTACA 1 cut(s) 1182
Bsp143I GATC 9 cut(s) 88, 1117, 1395, 1429, 1522, 1551, 1913, 1957, 2182
BspACI CCGC 2 cut(s) 166, 1630
BspANI GGCC 5 cut(s) 321, 883, 1244, 1633, 2210
BspCNI CTCAG 1 cut(s) 564
BspEI TCCGGA 1 cut(s) 112
BspHI TCATGA 2 cut(s) 1147, 1554
BspLI GGNNCC 4 cut(s) 180, 181, 1366, 2171
BspMAI CTGCAG 1 cut(s) 2065
BspMI ACCTGC 2 cut(s) 71, 461
BspOI GCTAGC 1 cut(s) 593
BspPI GGATC 1 cut(s) 1921
BsrDI GCAATG 1 cut(s) 1770
BsrGI TGTACA 1 cut(s) 1182
BsrI ACTGG 3 cut(s) 216, 2022, 2112
BssECI CCNNGG 2 cut(s) 42, 1507
BssMI GATC 9 cut(s) 88, 1117, 1395, 1429, 1522, 1551, 1913, 1957, 2182
BssNAI GTATAC 1 cut(s) 245
BssT1I CCWWGG 2 cut(s) 42, 1507
Bst1107I GTATAC 1 cut(s) 245
Bst4CI ACNGT 1 cut(s) 999
Bst6I CTCTTC 1 cut(s) 2144
BstAPI GCANNNNNTGC 1 cut(s) 1064
BstAUI TGTACA 1 cut(s) 1182
BstBAI YACGTR 2 cut(s) 510, 1784
BstC8I GCNNGC 2 cut(s) 591, 2004
BstDEI CTNAG 6 cut(s) 516, 572, 794, 957, 2007, 2077
BstF5I GGATG 8 cut(s) 121, 339, 373, 451, 895, 1729, 1834, 2034
BstKTI GATC 9 cut(s) 91, 1120, 1398, 1432, 1525, 1554, 1916, 1960, 2185
BstMAI GTCTC 3 cut(s) 604, 930, 1601
BstMBI GATC 9 cut(s) 88, 1117, 1395, 1429, 1522, 1551, 1913, 1957, 2182
BstMWI GCNNNNNNNGC 5 cut(s) 467, 547, 1064, 2226, 2235
BstNSI RCATGY 1 cut(s) 1388
BstSFI CTRYAG 2 cut(s) 818, 2061
BstV1I GCAGC 5 cut(s) 180, 299, 997, 1070, 2047
BstV2I GAAGAC 1 cut(s) 405
BstXI CCANNNNNNTGG 3 cut(s) 107, 762, 1663
BstZ17I GTATAC 1 cut(s) 245
BsuRI GGCC 5 cut(s) 321, 883, 1244, 1633, 2210
BtsCI GGATG 8 cut(s) 121, 339, 373, 451, 895, 1729, 1834, 2034
BtsI GCAGTG 1 cut(s) 618
BtsIMutI CAGTG 7 cut(s) 223, 618, 626, 1215, 1501, 2004, 2105
BveI ACCTGC 2 cut(s) 71, 461
Cac8I GCNNGC 2 cut(s) 591, 2004
CciI TCATGA 2 cut(s) 1147, 1554
Cfr13I GGNCC 6 cut(s) 110, 179, 1365, 1504, 2169, 2209
CseI GACGC 1 cut(s) 1056
Csp6I GTAC 7 cut(s) 511, 812, 1183, 1220, 1388, 1478, 1819
CspCI CAANNNNNGTGG 2 cut(s) 298, 333
CviQI GTAC 7 cut(s) 511, 812, 1183, 1220, 1388, 1478, 1819
DdeI CTNAG 6 cut(s) 516, 572, 794, 957, 2007, 2077
DpnI GATC 9 cut(s) 90, 1119, 1397, 1431, 1524, 1553, 1915, 1959, 2184
DpnII GATC 9 cut(s) 88, 1117, 1395, 1429, 1522, 1551, 1913, 1957, 2182
EaeI YGGCCR 3 cut(s) 319, 1242, 1631
Eam1104I CTCTTC 1 cut(s) 2144
EarI CTCTTC 1 cut(s) 2144
Eco130I CCWWGG 2 cut(s) 42, 1507
Eco147I AGGCCT 1 cut(s) 883
Eco47I GGWCC 5 cut(s) 110, 179, 1365, 1504, 2169
Eco57I CTGAAG 3 cut(s) 36, 270, 917
EcoO109I RGGNCCY 2 cut(s) 179, 2169
EcoRI GAATTC 1 cut(s) 1854
EcoT14I CCWWGG 2 cut(s) 42, 1507
ErhI CCWWGG 2 cut(s) 42, 1507
FaqI GGGAC 1 cut(s) 192
FbaI TGATCA 5 cut(s) 1117, 1395, 1429, 1522, 1957
FblI GTMKAC 1 cut(s) 244
Fnu4HI GCNGC 6 cut(s) 169, 288, 1011, 1059, 1631, 2061
FokI GGATG 8 cut(s) 128, 326, 380, 458, 902, 1736, 1841, 2041
Fsp4HI GCNGC 6 cut(s) 169, 288, 1011, 1059, 1631, 2061
FspBI CTAG 6 cut(s) 72, 590, 879, 987, 1473, 1508
GluI GCNGC 6 cut(s) 169, 288, 1011, 1059, 1631, 2061
GsuI CTGGAG 1 cut(s) 1639
HaeIII GGCC 5 cut(s) 321, 883, 1244, 1633, 2210
HapII CCGG 2 cut(s) 113, 298
HgaI GACGC 1 cut(s) 1056
HincII GTYRAC 1 cut(s) 1669
HindII GTYRAC 1 cut(s) 1669
HindIII AAGCTT 1 cut(s) 501
HpaII CCGG 2 cut(s) 113, 298
HphI GGTGA 6 cut(s) 317, 874, 1121, 1298, 1874, 1952
Hpy166II GTNNAC 6 cut(s) 61, 245, 814, 876, 1419, 1669
Hpy188I TCNGA 3 cut(s) 382, 1323, 1429
Hpy188III TCNNGA 9 cut(s) 14, 113, 159, 391, 491, 605, 1148, 1304, 1555
Hpy8I GTNNAC 6 cut(s) 61, 245, 814, 876, 1419, 1669
HpyAV CCTTC 4 cut(s) 11, 737, 760, 892
HpyCH4III ACNGT 1 cut(s) 999
HpyCH4IV ACGT 2 cut(s) 509, 1783
HpyF10VI GCNNNNNNNGC 5 cut(s) 467, 547, 1064, 2226, 2235
HpyF3I CTNAG 6 cut(s) 516, 572, 794, 957, 2007, 2077
HpySE526I ACGT 2 cut(s) 509, 1783
KflI GGGWCCC 1 cut(s) 179
Kpn2I TCCGGA 1 cut(s) 112
Ksp22I TGATCA 5 cut(s) 1117, 1395, 1429, 1522, 1957
Kzo9I GATC 9 cut(s) 88, 1117, 1395, 1429, 1522, 1551, 1913, 1957, 2182
LmnI GCTCC 3 cut(s) 568, 587, 1658
Lsp1109I GCAGC 5 cut(s) 180, 299, 997, 1070, 2047
MaeI CTAG 6 cut(s) 72, 590, 879, 987, 1473, 1508
MaeII ACGT 2 cut(s) 509, 1783
MaeIII GTNAC 2 cut(s) 305, 1976
MalI GATC 9 cut(s) 90, 1119, 1397, 1431, 1524, 1553, 1915, 1959, 2184
MboI GATC 9 cut(s) 88, 1117, 1395, 1429, 1522, 1551, 1913, 1957, 2182
MboII GAAGA 7 cut(s) 200, 241, 410, 588, 715, 1801, 2161
MfeI CAATTG 5 cut(s) 105, 981, 1601, 1833, 2144
MhlI GDGCHC 1 cut(s) 620
MlsI TGGCCA 1 cut(s) 1244
MluNI TGGCCA 1 cut(s) 1244
MlyI GAGTC 6 cut(s) 56, 164, 941, 1603, 1606, 1847
MmeI TCCRAC 1 cut(s) 1701
Mox20I TGGCCA 1 cut(s) 1244
MroI TCCGGA 1 cut(s) 112
MscI TGGCCA 1 cut(s) 1244
MseI TTAA 8 cut(s) 635, 915, 1052, 1101, 1593, 1737, 1884, 2124
MslI CAYNNNNRTG 2 cut(s) 1278, 1997
Msp20I TGGCCA 1 cut(s) 1244
MspI CCGG 2 cut(s) 113, 298
MunI CAATTG 5 cut(s) 105, 981, 1601, 1833, 2144
MwoI GCNNNNNNNGC 5 cut(s) 467, 547, 1064, 2226, 2235
NdeII GATC 9 cut(s) 88, 1117, 1395, 1429, 1522, 1551, 1913, 1957, 2182
NheI GCTAGC 1 cut(s) 589
NlaIV GGNNCC 4 cut(s) 180, 181, 1366, 2171
NmuCI GTSAC 1 cut(s) 305
NspI RCATGY 1 cut(s) 1388
PagI TCATGA 2 cut(s) 1147, 1554
PceI AGGCCT 1 cut(s) 883
PfeI GAWTC 4 cut(s) 26, 1792, 2051, 2066
PflFI GACNNNGTC 1 cut(s) 1423
PflMI CCANNNNNTGG 1 cut(s) 835
PkrI GCNGC 6 cut(s) 170, 289, 1012, 1060, 1632, 2062
PleI GAGTC 6 cut(s) 55, 163, 941, 1603, 1605, 1846
PpsI GAGTC 6 cut(s) 55, 163, 941, 1603, 1605, 1846
Ppu21I YACGTR 2 cut(s) 510, 1784
PpuMI RGGWCCY 2 cut(s) 179, 2169
PshBI ATTAAT 2 cut(s) 635, 915
Psp5II RGGWCCY 2 cut(s) 179, 2169
PspN4I GGNNCC 4 cut(s) 180, 181, 1366, 2171
PspPI GGNCC 6 cut(s) 110, 179, 1365, 1504, 2169, 2209
PspPPI RGGWCCY 2 cut(s) 179, 2169
PstI CTGCAG 1 cut(s) 2065
PsyI GACNNNGTC 1 cut(s) 1423
RsaI GTAC 7 cut(s) 512, 813, 1184, 1221, 1389, 1479, 1820
RsaNI GTAC 7 cut(s) 511, 812, 1183, 1220, 1388, 1478, 1819
RseI CAYNNNNRTG 2 cut(s) 1278, 1997
SaqAI TTAA 8 cut(s) 635, 915, 1052, 1101, 1593, 1737, 1884, 2124
SatI GCNGC 6 cut(s) 169, 288, 1011, 1059, 1631, 2061
Sau3AI GATC 9 cut(s) 88, 1117, 1395, 1429, 1522, 1551, 1913, 1957, 2182
Sau96I GGNCC 6 cut(s) 110, 179, 1365, 1504, 2169, 2209
ScaI AGTACT 2 cut(s) 1479, 1820
SchI GAGTC 6 cut(s) 56, 164, 941, 1603, 1606, 1847
SduI GDGCHC 1 cut(s) 620
SfcI CTRYAG 2 cut(s) 818, 2061
SinI GGWCC 5 cut(s) 110, 179, 1365, 1504, 2169
SmiMI CAYNNNNRTG 2 cut(s) 1278, 1997
SmlI CTYRAG 7 cut(s) 489, 1304, 1565, 1796, 1822, 2043, 2129
SmoI CTYRAG 7 cut(s) 489, 1304, 1565, 1796, 1822, 2043, 2129
SpeI ACTAGT 1 cut(s) 71
SseBI AGGCCT 1 cut(s) 883
SsiI CCGC 2 cut(s) 166, 1630
SspI AATATT 1 cut(s) 1447
SspMI CTAG 6 cut(s) 72, 590, 879, 987, 1473, 1508
StuI AGGCCT 1 cut(s) 883
StyI CCWWGG 2 cut(s) 42, 1507
TaaI ACNGT 1 cut(s) 999
TaiI ACGT 2 cut(s) 512, 1786
TaqI TCGA 1 cut(s) 2205
TaqII GACCGA 1 cut(s) 835
TatI WGTACW 4 cut(s) 1182, 1387, 1477, 1818
TauI GCSGC 1 cut(s) 1633
TfiI GAWTC 4 cut(s) 26, 1792, 2051, 2066
Tru1I TTAA 8 cut(s) 635, 915, 1052, 1101, 1593, 1737, 1884, 2124
Tru9I TTAA 8 cut(s) 635, 915, 1052, 1101, 1593, 1737, 1884, 2124
TscAI CASTG 7 cut(s) 223, 625, 633, 1215, 1501, 2004, 2112
TseFI GTSAC 1 cut(s) 305
TseI GCWGC 5 cut(s) 168, 287, 1010, 1058, 2060
Tsp45I GTSAC 1 cut(s) 305
TspDTI ATGAA 9 cut(s) 39, 351, 411, 416, 588, 653, 906, 1571, 2087
TspRI CASTG 7 cut(s) 223, 625, 633, 1215, 1501, 2004, 2112
Tth111I GACNNNGTC 1 cut(s) 1423
Van91I CCANNNNNTGG 1 cut(s) 835
VpaK11BI GGWCC 5 cut(s) 110, 179, 1365, 1504, 2169
VspI ATTAAT 2 cut(s) 635, 915
XapI RAATTY 3 cut(s) 642, 1048, 1854
XceI RCATGY 1 cut(s) 1388
XcmI CCANNNNNNNNNTGG 1 cut(s) 883
XmaJI CCTAGG 1 cut(s) 1507
XmiI GTMKAC 1 cut(s) 244
XspI CTAG 6 cut(s) 72, 590, 879, 987, 1473, 1508
ZrmI AGTACT 2 cut(s) 1479, 1820
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.