Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000779

Physical Location & Seq

Genomic Coordinates Forward (+)

67852579 .. 67855749

Gene Structure 3171 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ27929

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2298 bp

ATGGAGATGACTGCTTGTATGGTGAAGAACGAACATTTTGGTAGTAAAATTGGTAAAAATGATGAGCCTGCACTTCTAGGTTCTTTATCACAGCTACCAGAATCCATCGAATCAGTGAGCTCGCTGCCGCCGCCGTCAATTCAGACTTCTTCAGGACCAGCTCAGTTGATGTCTCCAACTAGAAGTCTTGTACCAGAGGAAGGAGATGTCGTCCAAAAGAAGATTGGTGAACTTACAGAGCTTGATAATATATCTACGACGGTAGGAAATTACTTTCAGTATGCCTTACCTAAGTGTTGTGGGTATGGAAGGGATATTGGTACATGTTCTGTGGTAAATGTTTTTAATGCATTGTGTGTAATGCTCACGCATTACATTGAGAGTCCAAAGAAGATTAGTCACTATGTACTGCAACTATGCTTCTCTGGATTTGATAAGAAGGTTCGTGATAAAGGTAGTACTCTCTTAACAAATGAACTTTTTATGGAGTACTTTGCAGGGACAATGGCATCTGGTAATAGCTTGAAATTTACCTTTTCACTAATAATGACTTTGATTGAATTATGGAGTTATGGATATGTTGAGAAAAATATAAGATGGTTTACCAAAATTTCAGTGATTAGTTTTGGAAATGGATGCTTTGATTTCCACCATGATCATGGGCTTATCTCTTGTGGCATTGAATTCAATAGTTTCTTGGTGAATAGAAATGATGGACACATAGTTGTTCTATGCCCCAACATGTTCAGAGATGGGGTTAATTTGGAGTATCAGTGGGAAACAAAAGGATCTGGGCATTTGCTTATGGTGGCTCGTCCTCTGCATGTGAAGCTTCTTAAGAATGATGTACTGGTTTCGAATCAGTTCTATGGGTTTGTAAAGGAGTTGGAGAAAGCACTTGCTATTTTGCTTGTGAGTTTGCTCAAAATTACGGCAGATATTAGAAAGCAGATTGAGCTTCTTCACGGGCAAGCAAAAATGGCAGAGTTGTATATTGACCTTAAGGAGGTGAAAAGGAGAGAAGAGCTTCTGGTATTGATGGGGAGCAACAATGAGAGGAACAAGAAGAACAAAGGGTCTATAGACTTGGTTATTAAGGAAGTTATTGATTTTGTCAAGATCAACTCAGAGTTCTCATCTTCGAGGTACTTTTCTGGTCTAGTTGTTCCAATAACTACTTTTGTTATTCAAGCTGTGCTTGTTGGAAATGTCTCACATGTTTTTGGAACATTGAGTGTTTTTCTTGTCAATAAACTGAAGCACAAGAAGGAATCACTTGAGGTTATTTGCCTTGCGACCATCTTCTTTGTTACTTATGTATTGTCTTTCCATATGCAACTTGTGGACAAATGTATGCCACCTCAAATAGTGGAGTTTACTCAACATTACATAACAAAGAAAGAGTTGGTCACTTTTTGGATTTGGGTTCCTACAACACTGTCAAGTTCAAAAGTTTGGATACTTAACTCGCATGGTTTGATTGTGATCAAGGGTCATCTATTAATTGGTGACATATTCCGGATAAGAGAGCTTATTTTTTATATTGAATCTCATATCACTCCCACTGGAGCAATTGCTACTGGACTTGTTTTCTACTCTGGTGAAGAGTTGCACATTACCAACTCAGATTCACATATGGTTCACTATAACATGTGTTTGCGGCACACAAAGTGCAAGGTGAGGGATATAATAAGCAACATTTGTTTGAGAAGCTCAATGACTTATGAGGAAGAGATTTCAAAGCTAGAGGTAGAAGCTCAGAAGCAAACAGGGAGTGGTAGACTAATTGTGGTATGCAATTTAAACAATCTCATATCCTTTGTTTCATATTGCAATTCCATGGTTTTCGTAGATAATGATTTTGAAAGTGAAGATTTTACACTGCAAGGTTCTACACTCTGTAATAGATATTATGATCGTTCCTCGTCTTCTCAATCCATAATTGTCAAGATCTCAGATGAATTTCGATTCCCCAAAAGTGGAAACGAGCTTATTCACGTAGCCCTTATACCTAACTATGAACTGAAGAGTCTATTGCATCAATGTTCCAGAAGTTGGATCATCACCATTATCTTCATATTCTTTTACATTTCTATTGTAAAAGCTGCAAATGATACTGTGAAGTTAACAGCTGAGTTTCTGGTGATTCTTAATATCGAGAACTACTTTTGGGACGCAATTGAGTCATGGTTAAATGGAACTCTTGGTAAAAATGGTTCTTGTGAGATTAAATGGGGTGGCAATTTTACTAAACAAGGATCATTGGATTATGGTGCAGACTTTGGGTTTGGACTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002237 GO:0002682 GO:0002683 GO:0003674 GO:0003824 GO:0004842 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005886 GO:0006464 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009608 GO:0009609 GO:0009610 GO:0009617 GO:0009620 GO:0009877 GO:0009987 GO:0010033 GO:0010941 GO:0016020 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0033612 GO:0036211 GO:0036377 GO:0042221 GO:0042742 GO:0042981 GO:0043066 GO:0043067 GO:0043069 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044403 GO:0044419 GO:0044424 GO:0044444 GO:0044464 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0050776 GO:0050777 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051704 GO:0051707 GO:0060548 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0070696 GO:0071704 GO:0071944 GO:0098542 GO:0140096 GO:1901564 GO:2000026 GO:2000028 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm U-box

Protein Analysis

765

Amino Acids

86.41

Weight (kDa)

6.55

Isoelectric Point (pI)

42.22

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000779)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g29862
rosa_chinensis	RchiOBHm_Chr1g0313641 RchiOBHm_Chr4g0408161 RchiOBHm_Chr4g0408171 RchiOBHm_Chr4g0437611 RchiOBHm_Chr4g0437621 RchiOBHm_Chr4g0444671 RchiOBHm_Chr5g0045021 RchiOBHm_Chr5g0070121 RchiOBHm_Chr5g0082551 RchiOBHm_Chr6g0247501 RchiOBHm_Chr6g0271311 RchiOBHm_Chr6g0290811 RchiOBHm_Chr6g0310571
rosa_laevigata	RLG00000004718 RLG00000008552 RLG00000015595
rosa_multiflora	Rmu_co8342433.1_g000001 Rmu_sc0000147.1_g000080 Rmu_sc0000391.1_g000018 Rmu_sc0000753.1_g000021 Rmu_sc0000870.1_g000071 Rmu_sc0000870.1_g000072 Rmu_sc0001648.1_g000026 Rmu_sc0001648.1_g000043 Rmu_sc0001972.1_g000009 Rmu_sc0002109.1_g000009 Rmu_sc0003340.1_g000008 Rmu_sc0003340.1_g000009 Rmu_sc0004874.1_g000014 Rmu_sc0005823.1_g000009 Rmu_sc0005941.1_g000006 Rmu_sc0009850.1_g000015 Rmu_sc0015511.1_g000012
rosa_roxburghii	Rroxscaffold_1G00034320 Rroxscaffold_1G00036130 Rroxscaffold_1G00043440 Rroxscaffold_1G00043450 Rroxscaffold_1G00050660 Rroxscaffold_1G00050670 Rroxscaffold_1G00066940 Rroxscaffold_2G00094100 Rroxscaffold_2G00120240 Rroxscaffold_4G00287900 Rroxscaffold_4G00287910 Rroxscaffold_4G00290700 Rroxscaffold_4G00290710 Rroxscaffold_4G00298640 Rroxscaffold_4G00308540 Rroxscaffold_5G00369420 Rroxscaffold_7G00217900
rosa_rugosa	Rorug06G0077100
rosa_samantha	Rh1AG005600 Rh1AG005700 Rh1BG433000 Rh1DG003900 Rh2CG286600 Rh3AG243900 Rh3BG368800 Rh5AG301800 Rh5BG309500 Rh5CG501500 Rh5CG501600 Rh5DG320200 Rh6AG179500 Rh6CG338800 Rh6CG405000 Rh6DG092100 Rh7AG294100 Rh7CG239600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	2055
AccI	GTMKAC	1 cut(s)	1780
AccIII	TCCGGA	1 cut(s)	1518
AciI	CCGC	3 cut(s)	128, 131, 1660
AclWI	GGATC	3 cut(s)	796, 2066, 2266
AcsI	RAATTY	4 cut(s)	527, 609, 683, 1961
AcuI	CTGAAG	3 cut(s)	135, 1277, 2045
AdeI	CACNNNGTG	1 cut(s)	1671
AfaI	GTAC	7 cut(s)	192, 322, 408, 460, 491, 849, 1148
AfiI	CCNNNNNNNGG	4 cut(s)	200, 1006, 1979, 2055
AflII	CTTAAG	2 cut(s)	836, 1001
AflIII	ACRYGT	4 cut(s)	323, 741, 1216, 1650
AgsI	TTSAA	9 cut(s)	526, 560, 683, 688, 1190, 1449, 1547, 1740, 1865
Alw21I	GWGCWC	1 cut(s)	122
Alw26I	GTCTC	2 cut(s)	177, 1216
AlwI	GGATC	3 cut(s)	796, 2066, 2266
Aor13HI	TCCGGA	1 cut(s)	1518
ApeKI	GCWGC	2 cut(s)	124, 2105
ApoI	RAATTY	4 cut(s)	527, 609, 683, 1961
ArsI	GACNNNNNNTTYG	1 cut(s)	2270
AseI	ATTAAT	1 cut(s)	1502
Asp700I	GAANNNNTTC	2 cut(s)	863, 1026
AspS9I	GGNCC	1 cut(s)	155
AsuHPI	GGTGA	9 cut(s)	34, 239, 712, 1021, 1520, 1613, 1690, 2056, 2155
AsuII	TTCGAA	1 cut(s)	857
AvaII	GGWCC	1 cut(s)	155
BanII	GRGCYC	1 cut(s)	122
BbsI	GAAGAC	1 cut(s)	1920
Bbv12I	GWGCWC	1 cut(s)	122
BbvI	GCAGC	2 cut(s)	111, 2092
BccI	CCATC	6 cut(s)	113, 591, 707, 746, 1033, 1307
BceAI	ACGGC	2 cut(s)	118, 948
BciVI	GTATCC	1 cut(s)	1452
BclI	TGATCA	2 cut(s)	655, 1485
BcoDI	GTCTC	2 cut(s)	177, 1216
BfaI	CTAG	4 cut(s)	77, 180, 1160, 1745
BfmI	CTRYAG	1 cut(s)	1080
BfrI	CTTAAG	2 cut(s)	836, 1001
BfuI	GTATCC	1 cut(s)	1452
BglII	AGATCT	1 cut(s)	1950
BisI	GCNGC	5 cut(s)	125, 128, 131, 1661, 2106
BlsI	GCNGC	5 cut(s)	126, 129, 132, 1662, 2107
BmcAI	AGTACT	2 cut(s)	460, 491
Bme18I	GGWCC	1 cut(s)	155
BmgT120I	GGNCC	1 cut(s)	155
BmiI	GGNNCC	1 cut(s)	1428
BmsI	GCATC	3 cut(s)	518, 626, 2047
BpiI	GAAGAC	1 cut(s)	1920
BpmI	CTGGAG	1 cut(s)	1587
Bpu14I	TTCGAA	1 cut(s)	857
BpuEI	CTTGAG	1 cut(s)	1298
BsaAI	YACGTR	1 cut(s)	1999
BsaBI	GATNNNNATC	1 cut(s)	1484
BsaJI	CCNNGG	1 cut(s)	1839
BsaWI	WCCGGW	1 cut(s)	1518
BsaXI	ACNNNNNCTCC	4 cut(s)	195, 225, 758, 788
Bsc4I	CCNNNNNNNGG	4 cut(s)	200, 1006, 1979, 2055
Bse1I	ACTGG	3 cut(s)	855, 1570, 1585
Bse8I	GATNNNNATC	1 cut(s)	1484
BseAI	TCCGGA	1 cut(s)	1518
BseDI	CCNNGG	1 cut(s)	1839
BseGI	GGATG	1 cut(s)	641
BseJI	GATNNNNATC	1 cut(s)	1484
BseLI	CCNNNNNNNGG	4 cut(s)	200, 1006, 1979, 2055
BseMII	CTCAG	6 cut(s)	176, 1140, 1638, 1772, 1968, 2124
BseNI	ACTGG	3 cut(s)	855, 1570, 1585
BseXI	GCAGC	2 cut(s)	111, 2092
BsgI	GTGCAG	2 cut(s)	54, 2295
BsiHKAI	GWGCWC	1 cut(s)	122
BsiSI	CCGG	1 cut(s)	1519
BslFI	GGGAC	2 cut(s)	514, 2186
BslI	CCNNNNNNNGG	4 cut(s)	200, 1006, 1979, 2055
BsmAI	GTCTC	2 cut(s)	177, 1216
BsmFI	GGGAC	2 cut(s)	514, 2186
Bsp119I	TTCGAA	1 cut(s)	857
Bsp1286I	GDGCHC	1 cut(s)	122
Bsp13I	TCCGGA	1 cut(s)	1518
Bsp143I	GATC	8 cut(s)	655, 788, 1119, 1485, 1915, 1950, 2058, 2258
Bsp19I	CCATGG	1 cut(s)	1839
BspACI	CCGC	3 cut(s)	128, 131, 1660
BspCNI	CTCAG	6 cut(s)	175, 1139, 1637, 1771, 1967, 2125
BspEI	TCCGGA	1 cut(s)	1518
BspLI	GGNNCC	1 cut(s)	1428
BspPI	GGATC	3 cut(s)	796, 2066, 2266
BspQI	GCTCTTC	1 cut(s)	1017
BspT104I	TTCGAA	1 cut(s)	857
BspTI	CTTAAG	2 cut(s)	836, 1001
BsrI	ACTGG	3 cut(s)	855, 1570, 1585
BssECI	CCNNGG	1 cut(s)	1839
BssMI	GATC	8 cut(s)	655, 788, 1119, 1485, 1915, 1950, 2058, 2258
BssT1I	CCWWGG	1 cut(s)	1839
Bst4CI	ACNGT	3 cut(s)	262, 1440, 2119
Bst6I	CTCTTC	4 cut(s)	1017, 1599, 1725, 2021
BstAFI	CTTAAG	2 cut(s)	836, 1001
BstBAI	YACGTR	1 cut(s)	1999
BstBI	TTCGAA	1 cut(s)	857
BstC8I	GCNNGC	3 cut(s)	69, 122, 972
BstDEI	CTNAG	7 cut(s)	162, 291, 1126, 1624, 1758, 1954, 2133
BstDSI	CCRYGG	1 cut(s)	1839
BstENI	CCTNNNNNAGG	1 cut(s)	1004
BstF5I	GGATG	1 cut(s)	641
BstKTI	GATC	8 cut(s)	658, 791, 1122, 1488, 1918, 1953, 2061, 2261
BstMAI	GTCTC	2 cut(s)	177, 1216
BstMBI	GATC	8 cut(s)	655, 788, 1119, 1485, 1915, 1950, 2058, 2258
BstMWI	GCNNNNNNNGC	4 cut(s)	130, 829, 955, 980
BstNSI	RCATGY	5 cut(s)	327, 745, 827, 1220, 1654
BstSFI	CTRYAG	1 cut(s)	1080
BstV1I	GCAGC	2 cut(s)	111, 2092
BstV2I	GAAGAC	1 cut(s)	1920
BstX2I	RGATCY	2 cut(s)	788, 1950
BstXI	CCANNNNNNTGG	1 cut(s)	659
BstYI	RGATCY	2 cut(s)	788, 1950
BsuI	GTATCC	1 cut(s)	1452
BtgI	CCRYGG	1 cut(s)	1839
BtsCI	GGATG	1 cut(s)	641
BtsI	GCAGTG	1 cut(s)	1880
BtsIMutI	CAGTG	6 cut(s)	120, 621, 779, 1436, 1563, 1880
Cac8I	GCNNGC	3 cut(s)	69, 122, 972
Cfr13I	GGNCC	1 cut(s)	155
CseI	GACGC	1 cut(s)	2183
Csp6I	GTAC	7 cut(s)	191, 321, 407, 459, 490, 848, 1147
CviQI	GTAC	7 cut(s)	191, 321, 407, 459, 490, 848, 1147
DdeI	CTNAG	7 cut(s)	162, 291, 1126, 1624, 1758, 1954, 2133
DpnI	GATC	8 cut(s)	657, 790, 1121, 1487, 1917, 1952, 2060, 2260
DpnII	GATC	8 cut(s)	655, 788, 1119, 1485, 1915, 1950, 2058, 2258
DraI	TTTAAA	1 cut(s)	1803
DraIII	CACNNNGTG	1 cut(s)	1671
Eam1104I	CTCTTC	4 cut(s)	1017, 1599, 1725, 2021
EarI	CTCTTC	4 cut(s)	1017, 1599, 1725, 2021
Ecl136II	GAGCTC	1 cut(s)	120
Eco130I	CCWWGG	1 cut(s)	1839
Eco24I	GRGCYC	1 cut(s)	122
Eco47I	GGWCC	1 cut(s)	155
Eco53kI	GAGCTC	1 cut(s)	120
Eco57I	CTGAAG	3 cut(s)	135, 1277, 2045
EcoICRI	GAGCTC	1 cut(s)	120
EcoNI	CCTNNNNNAGG	1 cut(s)	1004
EcoRI	GAATTC	1 cut(s)	683
EcoT14I	CCWWGG	1 cut(s)	1839
EcoT22I	ATGCAT	1 cut(s)	352
EcoT38I	GRGCYC	1 cut(s)	122
ErhI	CCWWGG	1 cut(s)	1839
FalI	AAGNNNNNCTT	2 cut(s)	1182, 1214
FaqI	GGGAC	2 cut(s)	514, 2186
FauNDI	CATATG	2 cut(s)	1332, 1635
FbaI	TGATCA	2 cut(s)	655, 1485
FblI	GTMKAC	1 cut(s)	1780
Fnu4HI	GCNGC	5 cut(s)	125, 128, 131, 1661, 2106
FokI	GGATG	1 cut(s)	648
FriOI	GRGCYC	1 cut(s)	122
Fsp4HI	GCNGC	5 cut(s)	125, 128, 131, 1661, 2106
FspBI	CTAG	4 cut(s)	77, 180, 1160, 1745
GluI	GCNGC	5 cut(s)	125, 128, 131, 1661, 2106
GsuI	CTGGAG	1 cut(s)	1587
HapII	CCGG	1 cut(s)	1519
HgaI	GACGC	1 cut(s)	2183
HincII	GTYRAC	1 cut(s)	2127
HindII	GTYRAC	1 cut(s)	2127
HindIII	AAGCTT	1 cut(s)	830
HpaI	GTTAAC	1 cut(s)	2127
HpaII	CCGG	1 cut(s)	1519
HphI	GGTGA	9 cut(s)	34, 239, 712, 1021, 1520, 1613, 1690, 2056, 2155
Hpy166II	GTNNAC	7 cut(s)	230, 603, 1345, 1377, 1642, 1781, 2127
Hpy188I	TCNGA	6 cut(s)	144, 749, 1129, 1627, 1761, 1957
Hpy188III	TCNNGA	8 cut(s)	153, 426, 446, 1117, 1519, 1948, 2049, 2158
Hpy8I	GTNNAC	7 cut(s)	230, 603, 1345, 1377, 1642, 1781, 2127
Hpy99I	CGWCG	1 cut(s)	262
HpyAV	CCTTC	4 cut(s)	194, 303, 433, 1261
HpyCH4III	ACNGT	3 cut(s)	262, 1440, 2119
HpyCH4IV	ACGT	1 cut(s)	1998
HpyF10VI	GCNNNNNNNGC	4 cut(s)	130, 829, 955, 980
HpyF3I	CTNAG	7 cut(s)	162, 291, 1126, 1624, 1758, 1954, 2133
HpySE526I	ACGT	1 cut(s)	1998
Kpn2I	TCCGGA	1 cut(s)	1518
Ksp22I	TGATCA	2 cut(s)	655, 1485
KspAI	GTTAAC	1 cut(s)	2127
Kzo9I	GATC	8 cut(s)	655, 788, 1119, 1485, 1915, 1950, 2058, 2258
LguI	GCTCTTC	1 cut(s)	1017
LmnI	GCTCC	2 cut(s)	1044, 1568
Lsp1109I	GCAGC	2 cut(s)	111, 2092
LweI	GCATC	3 cut(s)	518, 626, 2047
MaeI	CTAG	4 cut(s)	77, 180, 1160, 1745
MaeII	ACGT	1 cut(s)	1998
MaeIII	GTNAC	4 cut(s)	398, 1309, 1408, 1508
MalI	GATC	8 cut(s)	657, 790, 1121, 1487, 1917, 1952, 2060, 2260
MboI	GATC	8 cut(s)	655, 788, 1119, 1485, 1915, 1950, 2058, 2258
MfeI	CAATTG	2 cut(s)	1572, 2178
MflI	RGATCY	2 cut(s)	788, 1950
MhlI	GDGCHC	1 cut(s)	122
MlyI	GAGTC	3 cut(s)	391, 2038, 2192
MmeI	TCCRAC	4 cut(s)	200, 867, 1183, 2036
Mph1103I	ATGCAT	1 cut(s)	352
MroI	TCCGGA	1 cut(s)	1518
MroXI	GAANNNNTTC	2 cut(s)	863, 1026
MslI	CAYNNNNRTG	1 cut(s)	657
MspA1I	CMGCKG	1 cut(s)	2132
MspCI	CTTAAG	2 cut(s)	836, 1001
MspI	CCGG	1 cut(s)	1519
MunI	CAATTG	2 cut(s)	1572, 2178
MwoI	GCNNNNNNNGC	4 cut(s)	130, 829, 955, 980
NcoI	CCATGG	1 cut(s)	1839
NdeI	CATATG	2 cut(s)	1332, 1635
NdeII	GATC	8 cut(s)	655, 788, 1119, 1485, 1915, 1950, 2058, 2258
NlaIV	GGNNCC	1 cut(s)	1428
NmuCI	GTSAC	3 cut(s)	398, 1408, 1508
NsiI	ATGCAT	1 cut(s)	352
NspI	RCATGY	5 cut(s)	327, 745, 827, 1220, 1654
NspV	TTCGAA	1 cut(s)	857
PciI	ACATGT	4 cut(s)	323, 741, 1216, 1650
PciSI	GCTCTTC	1 cut(s)	1017
PdmI	GAANNNNTTC	2 cut(s)	863, 1026
PfeI	GAWTC	8 cut(s)	101, 110, 859, 1271, 1547, 1628, 1968, 2146
PflMI	CCANNNNNTGG	1 cut(s)	2055
PkrI	GCNGC	5 cut(s)	126, 129, 132, 1662, 2107
PleI	GAGTC	3 cut(s)	390, 2037, 2191
PpsI	GAGTC	3 cut(s)	390, 2037, 2191
Ppu21I	YACGTR	1 cut(s)	1999
PscI	ACATGT	4 cut(s)	323, 741, 1216, 1650
PshBI	ATTAAT	1 cut(s)	1502
Psp124BI	GAGCTC	1 cut(s)	122
PspN4I	GGNNCC	1 cut(s)	1428
PspPI	GGNCC	1 cut(s)	155
PsrI	GAACNNNNNNTAC	2 cut(s)	2200, 2232
PsuI	RGATCY	2 cut(s)	788, 1950
PvuII	CAGCTG	1 cut(s)	2132
RsaI	GTAC	7 cut(s)	192, 322, 408, 460, 491, 849, 1148
RsaNI	GTAC	7 cut(s)	191, 321, 407, 459, 490, 848, 1147
RseI	CAYNNNNRTG	1 cut(s)	657
SacI	GAGCTC	1 cut(s)	122
SapI	GCTCTTC	1 cut(s)	1017
SatI	GCNGC	5 cut(s)	125, 128, 131, 1661, 2106
Sau3AI	GATC	8 cut(s)	655, 788, 1119, 1485, 1915, 1950, 2058, 2258
Sau96I	GGNCC	1 cut(s)	155
ScaI	AGTACT	2 cut(s)	460, 491
SchI	GAGTC	3 cut(s)	391, 2038, 2192
SduI	GDGCHC	1 cut(s)	122
SfaNI	GCATC	3 cut(s)	518, 626, 2047
SfcI	CTRYAG	1 cut(s)	1080
SfuI	TTCGAA	1 cut(s)	857
SinI	GGWCC	1 cut(s)	155
SmiMI	CAYNNNNRTG	1 cut(s)	657
SmlI	CTYRAG	3 cut(s)	836, 1001, 1277
SmoI	CTYRAG	3 cut(s)	836, 1001, 1277
SsiI	CCGC	3 cut(s)	128, 131, 1660
SspMI	CTAG	4 cut(s)	77, 180, 1160, 1745
SstI	GAGCTC	1 cut(s)	122
StyI	CCWWGG	1 cut(s)	1839
TaaI	ACNGT	3 cut(s)	262, 1440, 2119
TaiI	ACGT	1 cut(s)	2001
TaqI	TCGA	5 cut(s)	108, 857, 1142, 1966, 2157
TatI	WGTACW	4 cut(s)	406, 458, 489, 847
TauI	GCSGC	3 cut(s)	130, 133, 1663
TfiI	GAWTC	8 cut(s)	101, 110, 859, 1271, 1547, 1628, 1968, 2146
TscAI	CASTG	6 cut(s)	120, 621, 779, 1443, 1570, 1887
TseFI	GTSAC	3 cut(s)	398, 1408, 1508
TseI	GCWGC	2 cut(s)	124, 2105
Tsp45I	GTSAC	3 cut(s)	398, 1408, 1508
TspDTI	ATGAA	5 cut(s)	489, 1815, 1974, 2034, 2065
TspRI	CASTG	6 cut(s)	120, 621, 779, 1443, 1570, 1887
Van91I	CCANNNNNTGG	1 cut(s)	2055
Vha464I	CTTAAG	2 cut(s)	836, 1001
VpaK11BI	GGWCC	1 cut(s)	155
VspI	ATTAAT	1 cut(s)	1502
XagI	CCTNNNNNAGG	1 cut(s)	1004
XapI	RAATTY	4 cut(s)	527, 609, 683, 1961
XceI	RCATGY	5 cut(s)	327, 745, 827, 1220, 1654
XcmI	CCANNNNNNNNNTGG	2 cut(s)	221, 656
XmiI	GTMKAC	1 cut(s)	1780
XmnI	GAANNNNTTC	2 cut(s)	863, 1026
XspI	CTAG	4 cut(s)	77, 180, 1160, 1745
ZrmI	AGTACT	2 cut(s)	460, 491
Zsp2I	ATGCAT	1 cut(s)	352

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.