RLG00000000951

MOSC domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0000887
Physical Location & Seq
Reverse (-)
8394637 .. 8399841
5205 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000000951

Sequence Viewer

Length: 999 bp
ATGTTCTGCTTCCATTTATCCCTCAGACACCAAGCTGAGCTTCTGCAGCATCTAGTCGAGAGTCGGAGAGGGAAATCAAGGTCCAGAAGCTCGTCCTTAACATCTCCGTCGGCGAGAGCGGCGATCGTCTCACCAAGGCCGCCAAGGTCTTTGGAGCAACTCAGTGGCCAGACCCCTGTTTTCTCCAAAGCTCGGTACACTGTGAGGTCTTTTGGTATTCAGGAGCCTATCGATCTTGGAATTAAACACTGTCCACTGGCTAATTCCAGCATTGAAGAAGTTGCCTCAACAGGACCTGGTATTCGCTTATTCCAACTCTATGTGTTCAAAGACAGGAATCTGGTTACACGGCTTGTCAGAAGGGCTGAGAGGGATGGTTATAAGGCAATAGTCCTCACTGCTGACAATCCAAGGCTCGGGCGTAGGGACGTTGATATCAAGAACAGGTTTACTATGCCACCAAGTTTGACATTGAAAAACTTCAAAAATTTGGATCTTGGAAAGATTGATGAGACCAATGATTCTGGATTAGCATCGTATGTTGCTGGACTATTTGCCCACTCTCTCAGCTGGAAGGGATCTGTCATTCGCTTTTCAGTATTAAAAGCACCTGGCATGGATGCACTGAAGATTTCTATGAGTCCACCACAAGAAATAGCAGATGGAGTTTCAATATGGGCATGGTCTGGTGCTGCCTTTGATGAGGGAGCTGATGCATCAAAATGGTTTTCGGACTATCTTGGGAAACCTAGTCGACTTGTTCGCTTTAATGCAGCTTCAGAAACTAGACCTGTGAAACCGTCCTTTTGGTCTCATAAACCTGTGGAACCTGAATATGTTGGGGGGAAGCAAATCATGTTCTCCAACCTTTTTCCATACTTGATAGCGTCTCAGGCATCATTGGATACACTAAATGAGCATCTGAAGGACCCTGTACCAATTAATCGTTTTAGACCCAAGTACTTTTCTTCTTATATAGCATCTCCTTATATTGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MOSC MOSC_N

Protein Analysis

333

Amino Acids

37.1

Weight (kDa)

9.85

Isoelectric Point (pI)

44.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FMN_dh PF01070 86 - 192 1.2e-19 FMN-dependent dehydrogenase
MOSC_N PF03476 200 - 250 7.7e-07 MOSC N-terminal beta barrel domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 381
AccBSI CCGCTC 1 cut(s) 119
AccI GTMKAC 1 cut(s) 754
AciI CCGC 2 cut(s) 119, 140
AclWI GGATC 2 cut(s) 501, 586
AcoI YGGCCR 1 cut(s) 166
AcsI RAATTY 1 cut(s) 487
AcuI CTGAAG 3 cut(s) 647, 762, 944
AfaI GTAC 3 cut(s) 197, 936, 962
AfiI CCNNNNNNNGG 2 cut(s) 192, 416
AgsI TTSAA 5 cut(s) 275, 328, 475, 484, 672
AjnI CCWGG 2 cut(s) 295, 610
AjuI GAANNNNNNNTTGG 2 cut(s) 24, 56
AluBI AGCT 7 cut(s) 35, 40, 90, 191, 570, 710, 776
AluI AGCT 7 cut(s) 35, 40, 90, 191, 570, 710, 776
Alw26I GTCTC 4 cut(s) 133, 506, 816, 894
AlwI GGATC 2 cut(s) 501, 586
AlwNI CAGNNNCTG 1 cut(s) 296
Ama87I CYCGRG 1 cut(s) 416
AoxI GGCC 2 cut(s) 137, 166
ApeKI GCWGC 3 cut(s) 46, 692, 773
ApoI RAATTY 1 cut(s) 487
ArsI GACNNNNNNTTYG 2 cut(s) 285, 317
AseI ATTAAT 1 cut(s) 942
Asp700I GAANNNNTTC 1 cut(s) 479
AspS9I GGNCC 3 cut(s) 81, 293, 928
AsuHPI GGTGA 1 cut(s) 123
AvaI CYCGRG 1 cut(s) 416
AvaII GGWCC 3 cut(s) 81, 293, 928
BalI TGGCCA 1 cut(s) 168
BbvI GCAGC 3 cut(s) 58, 679, 785
BccI CCATC 2 cut(s) 368, 656
BceAI ACGGC 1 cut(s) 365
BciT130I CCWGG 2 cut(s) 297, 612
BciVI GTATCC 1 cut(s) 898
BcoDI GTCTC 4 cut(s) 133, 506, 816, 894
BfaI CTAG 3 cut(s) 53, 750, 786
BfmI CTRYAG 1 cut(s) 44
BfuI GTATCC 1 cut(s) 898
BisI GCNGC 5 cut(s) 47, 120, 140, 693, 774
BlpI GCTNAGC 1 cut(s) 36
BlsI GCNGC 5 cut(s) 48, 121, 141, 694, 775
BmcAI AGTACT 1 cut(s) 962
Bme1390I CCNGG 2 cut(s) 297, 612
Bme18I GGWCC 3 cut(s) 81, 293, 928
BmeT110I CYCGRG 1 cut(s) 416
BmgT120I GGNCC 3 cut(s) 81, 293, 928
BmiI GGNNCC 3 cut(s) 225, 828, 930
BmrFI CCNGG 2 cut(s) 297, 612
BmsI GCATC 8 cut(s) 58, 542, 610, 703, 725, 905, 928, 989
Bpu1102I GCTNAGC 1 cut(s) 36
Bsa29I ATCGAT 1 cut(s) 231
BsaBI GATNNNNATC 1 cut(s) 532
BsaI GGTCTC 2 cut(s) 506, 816
BsaJI CCNNGG 3 cut(s) 134, 143, 410
Bsc4I CCNNNNNNNGG 2 cut(s) 192, 416
Bse1I ACTGG 1 cut(s) 261
Bse8I GATNNNNATC 1 cut(s) 532
BseBI CCWGG 2 cut(s) 297, 612
BseCI ATCGAT 1 cut(s) 231
BseDI CCNNGG 3 cut(s) 134, 143, 410
BseGI GGATG 2 cut(s) 379, 625
BseJI GATNNNNATC 1 cut(s) 532
BseLI CCNNNNNNNGG 2 cut(s) 192, 416
BseMII CTCAG 6 cut(s) 27, 37, 175, 357, 580, 905
BseNI ACTGG 1 cut(s) 261
BseXI GCAGC 3 cut(s) 58, 679, 785
Bsh1285I CGRYCG 1 cut(s) 126
BshFI GGCC 2 cut(s) 139, 168
BshVI ATCGAT 1 cut(s) 231
BsiEI CGRYCG 1 cut(s) 126
BsiHKCI CYCGRG 1 cut(s) 416
BslFI GGGAC 1 cut(s) 440
BslI CCNNNNNNNGG 2 cut(s) 192, 416
BsmAI GTCTC 4 cut(s) 133, 506, 816, 894
BsmBI CGTCTC 2 cut(s) 133, 894
BsmFI GGGAC 1 cut(s) 440
BsnI GGCC 2 cut(s) 139, 168
Bso31I GGTCTC 2 cut(s) 506, 816
BsoBI CYCGRG 1 cut(s) 416
Bsp143I GATC 4 cut(s) 123, 232, 493, 578
Bsp1720I GCTNAGC 1 cut(s) 36
BspACI CCGC 2 cut(s) 119, 140
BspANI GGCC 2 cut(s) 139, 168
BspCNI CTCAG 6 cut(s) 28, 36, 174, 358, 579, 904
BspDI ATCGAT 1 cut(s) 231
BspLI GGNNCC 3 cut(s) 225, 828, 930
BspMAI CTGCAG 1 cut(s) 48
BspPI GGATC 2 cut(s) 501, 586
BspTNI GGTCTC 2 cut(s) 506, 816
BsrBI CCGCTC 1 cut(s) 119
BsrI ACTGG 1 cut(s) 261
BssECI CCNNGG 3 cut(s) 134, 143, 410
BssMI GATC 4 cut(s) 123, 232, 493, 578
BssT1I CCWWGG 3 cut(s) 134, 143, 410
Bst2UI CCWGG 2 cut(s) 297, 612
Bst4CI ACNGT 3 cut(s) 202, 251, 801
BstDEI CTNAG 6 cut(s) 23, 36, 161, 366, 566, 891
BstF5I GGATG 2 cut(s) 379, 625
BstKTI GATC 4 cut(s) 126, 235, 496, 581
BstMAI GTCTC 4 cut(s) 133, 506, 816, 894
BstMBI GATC 4 cut(s) 123, 232, 493, 578
BstMCI CGRYCG 1 cut(s) 126
BstMWI GCNNNNNNNGC 3 cut(s) 46, 119, 893
BstNI CCWGG 2 cut(s) 297, 612
BstSCI CCNGG 2 cut(s) 295, 610
BstSFI CTRYAG 1 cut(s) 44
BstV1I GCAGC 3 cut(s) 58, 679, 785
BstX2I RGATCY 2 cut(s) 493, 578
BstYI RGATCY 2 cut(s) 493, 578
Bsu15I ATCGAT 1 cut(s) 231
BsuI GTATCC 1 cut(s) 898
BsuRI GGCC 2 cut(s) 139, 168
BsuTUI ATCGAT 1 cut(s) 231
BtsCI GGATG 2 cut(s) 379, 625
BtsI GCAGTG 1 cut(s) 396
BtsIMutI CAGTG 6 cut(s) 169, 198, 247, 254, 396, 623
CaiI CAGNNNCTG 1 cut(s) 296
Cfr13I GGNCC 3 cut(s) 81, 293, 928
ClaI ATCGAT 1 cut(s) 231
CseI GACGC 1 cut(s) 876
CsiI ACCWGGT 1 cut(s) 295
Csp6I GTAC 3 cut(s) 196, 935, 961
CspCI CAANNNNNGTGG 2 cut(s) 447, 482
CviAII CATG 3 cut(s) 616, 681, 856
CviQI GTAC 3 cut(s) 196, 935, 961
DdeI CTNAG 6 cut(s) 23, 36, 161, 366, 566, 891
DpnI GATC 4 cut(s) 125, 234, 495, 580
DpnII GATC 4 cut(s) 123, 232, 493, 578
EaeI YGGCCR 1 cut(s) 166
Eco130I CCWWGG 3 cut(s) 134, 143, 410
Eco31I GGTCTC 2 cut(s) 506, 816
Eco32I GATATC 1 cut(s) 436
Eco47I GGWCC 3 cut(s) 81, 293, 928
Eco57I CTGAAG 3 cut(s) 647, 762, 944
Eco88I CYCGRG 1 cut(s) 416
EcoO109I RGGNCCY 2 cut(s) 293, 928
EcoRII CCWGG 2 cut(s) 295, 610
EcoRV GATATC 1 cut(s) 436
EcoT14I CCWWGG 3 cut(s) 134, 143, 410
EcoT22I ATGCAT 1 cut(s) 718
ErhI CCWWGG 3 cut(s) 134, 143, 410
Esp3I CGTCTC 2 cut(s) 133, 894
FaeI CATG 3 cut(s) 619, 684, 859
FalI AAGNNNNNCTT 2 cut(s) 24, 56
FaqI GGGAC 1 cut(s) 440
FatI CATG 3 cut(s) 615, 680, 855
FblI GTMKAC 1 cut(s) 754
Fnu4HI GCNGC 5 cut(s) 47, 120, 140, 693, 774
FokI GGATG 2 cut(s) 386, 632
Fsp4HI GCNGC 5 cut(s) 47, 120, 140, 693, 774
FspBI CTAG 3 cut(s) 53, 750, 786
GluI GCNGC 5 cut(s) 47, 120, 140, 693, 774
HaeIII GGCC 2 cut(s) 139, 168
HgaI GACGC 1 cut(s) 876
Hin1II CATG 3 cut(s) 619, 684, 859
HincII GTYRAC 1 cut(s) 755
HindII GTYRAC 1 cut(s) 755
HinfI GANTC 4 cut(s) 61, 337, 521, 640
HphI GGTGA 1 cut(s) 123
Hpy166II GTNNAC 5 cut(s) 198, 254, 450, 644, 755
Hpy188I TCNGA 6 cut(s) 26, 66, 359, 733, 781, 924
Hpy188III TCNNGA 5 cut(s) 58, 84, 221, 439, 525
Hpy8I GTNNAC 5 cut(s) 198, 254, 450, 644, 755
Hpy99I CGWCG 1 cut(s) 112
HpyAV CCTTC 3 cut(s) 354, 568, 919
HpyCH4III ACNGT 3 cut(s) 202, 251, 801
HpyCH4IV ACGT 1 cut(s) 429
HpyCH4V TGCA 4 cut(s) 46, 623, 716, 773
HpyF10VI GCNNNNNNNGC 3 cut(s) 46, 119, 893
HpyF3I CTNAG 6 cut(s) 23, 36, 161, 366, 566, 891
HpySE526I ACGT 1 cut(s) 429
Hsp92II CATG 3 cut(s) 619, 684, 859
Kzo9I GATC 4 cut(s) 123, 232, 493, 578
LmnI GCTCC 3 cut(s) 154, 223, 707
Lsp1109I GCAGC 3 cut(s) 58, 679, 785
LweI GCATC 8 cut(s) 58, 542, 610, 703, 725, 905, 928, 989
MabI ACCWGGT 1 cut(s) 295
MaeI CTAG 3 cut(s) 53, 750, 786
MaeII ACGT 1 cut(s) 429
MaeIII GTNAC 1 cut(s) 343
MalI GATC 4 cut(s) 125, 234, 495, 580
MbiI CCGCTC 1 cut(s) 119
MboI GATC 4 cut(s) 123, 232, 493, 578
MboII GAAGA 3 cut(s) 287, 640, 960
MflI RGATCY 2 cut(s) 493, 578
MlsI TGGCCA 1 cut(s) 168
MluCI AATT 4 cut(s) 240, 262, 487, 939
MluNI TGGCCA 1 cut(s) 168
MlyI GAGTC 2 cut(s) 70, 649
MmeI TCCRAC 3 cut(s) 44, 337, 888
MnlI CCTC 7 cut(s) 32, 62, 198, 295, 363, 404, 697
Mox20I TGGCCA 1 cut(s) 168
Mph1103I ATGCAT 1 cut(s) 718
MroXI GAANNNNTTC 1 cut(s) 479
MscI TGGCCA 1 cut(s) 168
MseI TTAA 6 cut(s) 98, 243, 602, 768, 942, 997
MslI CAYNNNNRTG 1 cut(s) 721
Msp20I TGGCCA 1 cut(s) 168
MspA1I CMGCKG 1 cut(s) 570
MspR9I CCNGG 2 cut(s) 297, 612
MvaI CCWGG 2 cut(s) 297, 612
MwoI GCNNNNNNNGC 3 cut(s) 46, 119, 893
NdeII GATC 4 cut(s) 123, 232, 493, 578
NlaIII CATG 3 cut(s) 619, 684, 859
NlaIV GGNNCC 3 cut(s) 225, 828, 930
NsiI ATGCAT 1 cut(s) 718
PdmI GAANNNNTTC 1 cut(s) 479
PfeI GAWTC 2 cut(s) 337, 521
PkrI GCNGC 5 cut(s) 48, 121, 141, 694, 775
Ple19I CGATCG 1 cut(s) 126
PleI GAGTC 2 cut(s) 69, 648
PpsI GAGTC 2 cut(s) 69, 648
PpuMI RGGWCCY 2 cut(s) 293, 928
PshBI ATTAAT 1 cut(s) 942
PsiI TTATAA 1 cut(s) 381
Psp5II RGGWCCY 2 cut(s) 293, 928
Psp6I CCWGG 2 cut(s) 295, 610
PspGI CCWGG 2 cut(s) 295, 610
PspN4I GGNNCC 3 cut(s) 225, 828, 930
PspPI GGNCC 3 cut(s) 81, 293, 928
PspPPI RGGWCCY 2 cut(s) 293, 928
PstI CTGCAG 1 cut(s) 48
PstNI CAGNNNCTG 1 cut(s) 296
PsuI RGATCY 2 cut(s) 493, 578
PvuI CGATCG 1 cut(s) 126
PvuII CAGCTG 1 cut(s) 570
RsaI GTAC 3 cut(s) 197, 936, 962
RsaNI GTAC 3 cut(s) 196, 935, 961
RseI CAYNNNNRTG 1 cut(s) 721
SalI GTCGAC 1 cut(s) 753
SaqAI TTAA 6 cut(s) 98, 243, 602, 768, 942, 997
SatI GCNGC 5 cut(s) 47, 120, 140, 693, 774
Sau3AI GATC 4 cut(s) 123, 232, 493, 578
Sau96I GGNCC 3 cut(s) 81, 293, 928
ScaI AGTACT 1 cut(s) 962
SchI GAGTC 2 cut(s) 70, 649
ScrFI CCNGG 2 cut(s) 297, 612
SexAI ACCWGGT 1 cut(s) 295
SfaNI GCATC 8 cut(s) 58, 542, 610, 703, 725, 905, 928, 989
SfcI CTRYAG 1 cut(s) 44
SinI GGWCC 3 cut(s) 81, 293, 928
SmiMI CAYNNNNRTG 1 cut(s) 721
Sse9I AATT 4 cut(s) 240, 262, 487, 939
SsiI CCGC 2 cut(s) 119, 140
SspMI CTAG 3 cut(s) 53, 750, 786
StyD4I CCNGG 2 cut(s) 295, 610
StyI CCWWGG 3 cut(s) 134, 143, 410
TaaI ACNGT 3 cut(s) 202, 251, 801
TaiI ACGT 1 cut(s) 432
TaqI TCGA 3 cut(s) 57, 231, 754
TasI AATT 4 cut(s) 240, 262, 487, 939
TatI WGTACW 1 cut(s) 960
TauI GCSGC 2 cut(s) 122, 142
TfiI GAWTC 2 cut(s) 337, 521
Tru1I TTAA 6 cut(s) 98, 243, 602, 768, 942, 997
Tru9I TTAA 6 cut(s) 98, 243, 602, 768, 942, 997
TscAI CASTG 6 cut(s) 169, 205, 254, 261, 403, 630
TseI GCWGC 3 cut(s) 46, 692, 773
TspGWI ACGGA 1 cut(s) 96
TspRI CASTG 6 cut(s) 169, 205, 254, 261, 403, 630
VpaK11BI GGWCC 3 cut(s) 81, 293, 928
VspI ATTAAT 1 cut(s) 942
XapI RAATTY 1 cut(s) 487
XmiI GTMKAC 1 cut(s) 754
XmnI GAANNNNTTC 1 cut(s) 479
XspI CTAG 3 cut(s) 53, 750, 786
ZrmI AGTACT 1 cut(s) 962
Zsp2I ATGCAT 1 cut(s) 718
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.