Rh6BG021700

MOSC domain

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
Physical Location & Seq
Reverse (-)
3205233 .. 3205697
465 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG021700.1

Sequence Viewer

Length: 264 bp
ATGGATGTACTAAAGATTTCTATGAGTCCACCACAAGAAATAGCAGATGGAGTTTCAATATGGGAATGGTCTGGTGCTGCCTTAGATGAGGGAGCTGATGCATCAAAATGGTTTTCGGACTATCTTGGGAAACCTAGTCGACTTGTTCGCTTTAATGCAGCTTCAGAAACTAGACATGTGAAACCGTCCTTTTGGTCTCATAAACCTGTGGAACCTGAATATGCTGGGGGGAAGCAAATCATGTTCTCCAACCTTTTTCCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

87

Amino Acids

9.73

Weight (kDa)

5.56

Isoelectric Point (pI)

45.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 139
AcuI CTGAAG 1 cut(s) 147
AfaI GTAC 1 cut(s) 9
AflIII ACRYGT 1 cut(s) 175
AgsI TTSAA 1 cut(s) 57
AluBI AGCT 2 cut(s) 95, 161
AluI AGCT 2 cut(s) 95, 161
Alw26I GTCTC 1 cut(s) 201
ApeKI GCWGC 2 cut(s) 77, 158
BbvI GCAGC 2 cut(s) 64, 170
BccI CCATC 1 cut(s) 41
BcoDI GTCTC 1 cut(s) 201
BfaI CTAG 2 cut(s) 135, 171
BisI GCNGC 2 cut(s) 78, 159
BlsI GCNGC 2 cut(s) 79, 160
BmiI GGNNCC 1 cut(s) 213
BmsI GCATC 2 cut(s) 88, 110
BsaI GGTCTC 1 cut(s) 201
BseGI GGATG 1 cut(s) 10
BseXI GCAGC 2 cut(s) 64, 170
BseYI CCCAGC 1 cut(s) 224
BsmAI GTCTC 1 cut(s) 201
Bso31I GGTCTC 1 cut(s) 201
BspLI GGNNCC 1 cut(s) 213
BspTNI GGTCTC 1 cut(s) 201
Bst4CI ACNGT 1 cut(s) 186
BstDEI CTNAG 1 cut(s) 82
BstF5I GGATG 1 cut(s) 10
BstMAI GTCTC 1 cut(s) 201
BstNSI RCATGY 1 cut(s) 179
BstV1I GCAGC 2 cut(s) 64, 170
BtsCI GGATG 1 cut(s) 10
Csp6I GTAC 1 cut(s) 8
CviAII CATG 2 cut(s) 176, 241
CviJI RGCY 2 cut(s) 95, 161
CviKI_1 RGCY 2 cut(s) 95, 161
CviQI GTAC 1 cut(s) 8
DdeI CTNAG 1 cut(s) 82
Eco31I GGTCTC 1 cut(s) 201
Eco57I CTGAAG 1 cut(s) 147
EcoT22I ATGCAT 1 cut(s) 103
FaeI CATG 2 cut(s) 179, 244
FaiI YATR 7 cut(s) 23, 61, 177, 201, 222, 242, 262
FatI CATG 2 cut(s) 175, 240
FblI GTMKAC 1 cut(s) 139
Fnu4HI GCNGC 2 cut(s) 78, 159
FokI GGATG 1 cut(s) 17
Fsp4HI GCNGC 2 cut(s) 78, 159
FspBI CTAG 2 cut(s) 135, 171
GluI GCNGC 2 cut(s) 78, 159
GsaI CCCAGC 1 cut(s) 228
Hin1II CATG 2 cut(s) 179, 244
HincII GTYRAC 1 cut(s) 140
HindII GTYRAC 1 cut(s) 140
HinfI GANTC 1 cut(s) 25
Hpy166II GTNNAC 2 cut(s) 29, 140
Hpy188I TCNGA 2 cut(s) 118, 166
Hpy8I GTNNAC 2 cut(s) 29, 140
HpyCH4III ACNGT 1 cut(s) 186
HpyCH4V TGCA 2 cut(s) 101, 158
HpyF3I CTNAG 1 cut(s) 82
Hsp92II CATG 2 cut(s) 179, 244
LmnI GCTCC 1 cut(s) 92
LpnPI CCDG 4 cut(s) 57, 210, 219, 228
Lsp1109I GCAGC 2 cut(s) 64, 170
LweI GCATC 2 cut(s) 88, 110
MaeI CTAG 2 cut(s) 135, 171
MlyI GAGTC 1 cut(s) 34
MnlI CCTC 1 cut(s) 82
Mph1103I ATGCAT 1 cut(s) 103
MseI TTAA 1 cut(s) 153
MslI CAYNNNNRTG 1 cut(s) 106
NlaIII CATG 2 cut(s) 179, 244
NlaIV GGNNCC 1 cut(s) 213
NsiI ATGCAT 1 cut(s) 103
NspI RCATGY 1 cut(s) 179
PciI ACATGT 1 cut(s) 175
PkrI GCNGC 2 cut(s) 79, 160
PleI GAGTC 1 cut(s) 33
PpsI GAGTC 1 cut(s) 33
PscI ACATGT 1 cut(s) 175
PspFI CCCAGC 1 cut(s) 224
PspN4I GGNNCC 1 cut(s) 213
RsaI GTAC 1 cut(s) 9
RsaNI GTAC 1 cut(s) 8
RseI CAYNNNNRTG 1 cut(s) 106
SalI GTCGAC 1 cut(s) 138
SaqAI TTAA 1 cut(s) 153
SatI GCNGC 2 cut(s) 78, 159
SchI GAGTC 1 cut(s) 34
SetI ASST 6 cut(s) 97, 136, 163, 208, 217, 255
SfaNI GCATC 2 cut(s) 88, 110
SmiMI CAYNNNNRTG 1 cut(s) 106
SspMI CTAG 2 cut(s) 135, 171
TaaI ACNGT 1 cut(s) 186
TaqI TCGA 1 cut(s) 139
TatI WGTACW 1 cut(s) 7
Tru1I TTAA 1 cut(s) 153
Tru9I TTAA 1 cut(s) 153
TseI GCWGC 2 cut(s) 77, 158
XceI RCATGY 1 cut(s) 179
XmiI GTMKAC 1 cut(s) 139
XspI CTAG 2 cut(s) 135, 171
Zsp2I ATGCAT 1 cut(s) 103
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.