Rmu_sc0007582.1_g000002

MOSC domain

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007582.1
Physical Location & Seq
Reverse (-)
1322 .. 1603
282 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007582.1_g000002.1.cds

Sequence Viewer

Length: 282 bp
atgccttcaacacatggagtgtacttagaaccacctatcattcactttgcagtattaaaagcacctgggatggatgtgctgaaggtttccttgagtacaccacaagaaatagcagatggggtttcagtatgggaatggtctggtgctgccttagatgagggagctgatgcatcgaaatggttttcagattatctagggaaacctagtcgacttgtccgctttaatgtaggtagagtttatcatggtgctttcaaagaatcaagcactgagtgcaccacctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

93

Amino Acids

10.14

Weight (kDa)

5.46

Isoelectric Point (pI)

32.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 208
AciI CCGC 1 cut(s) 217
AcuI CTGAAG 1 cut(s) 101
AdeI CACNNNGTG 1 cut(s) 270
AfaI GTAC 2 cut(s) 23, 97
AgsI TTSAA 2 cut(s) 9, 253
AjnI CCWGG 1 cut(s) 64
AluBI AGCT 1 cut(s) 164
AluI AGCT 1 cut(s) 164
Alw21I GWGCWC 1 cut(s) 275
Alw44I GTGCAC 1 cut(s) 271
ApaLI GTGCAC 1 cut(s) 271
ApeKI GCWGC 1 cut(s) 146
BaeGI GKGCMC 1 cut(s) 275
Bbv12I GWGCWC 1 cut(s) 275
BbvI GCAGC 1 cut(s) 133
BccI CCATC 2 cut(s) 64, 110
BciT130I CCWGG 1 cut(s) 66
BfaI CTAG 3 cut(s) 194, 204, 280
BisI GCNGC 1 cut(s) 147
BlsI GCNGC 1 cut(s) 148
Bme1390I CCNGG 1 cut(s) 66
BmrFI CCNGG 1 cut(s) 66
BmsI GCATC 2 cut(s) 157, 179
BpuEI CTTGAG 1 cut(s) 112
BsaJI CCNNGG 1 cut(s) 65
BseBI CCWGG 1 cut(s) 66
BseDI CCNNGG 1 cut(s) 65
BseGI GGATG 2 cut(s) 75, 79
BseMII CTCAG 1 cut(s) 258
BseSI GKGCMC 1 cut(s) 275
BseXI GCAGC 1 cut(s) 133
BsiHKAI GWGCWC 1 cut(s) 275
Bsp1286I GDGCHC 1 cut(s) 275
BspACI CCGC 1 cut(s) 217
BspCNI CTCAG 1 cut(s) 259
BssECI CCNNGG 1 cut(s) 65
Bst2UI CCWGG 1 cut(s) 66
BstAPI GCANNNNNTGC 1 cut(s) 270
BstDEI CTNAG 3 cut(s) 25, 151, 267
BstF5I GGATG 2 cut(s) 75, 79
BstMWI GCNNNNNNNGC 1 cut(s) 270
BstNI CCWGG 1 cut(s) 66
BstSCI CCNGG 1 cut(s) 64
BstSLI GKGCMC 1 cut(s) 275
BstV1I GCAGC 1 cut(s) 133
BtsCI GGATG 2 cut(s) 75, 79
BtsIMutI CAGTG 1 cut(s) 264
Csp6I GTAC 2 cut(s) 22, 96
CviAII CATG 2 cut(s) 14, 242
CviJI RGCY 1 cut(s) 164
CviKI_1 RGCY 1 cut(s) 164
CviQI GTAC 2 cut(s) 22, 96
DdeI CTNAG 3 cut(s) 25, 151, 267
DraIII CACNNNGTG 1 cut(s) 270
Eco57I CTGAAG 1 cut(s) 101
EcoRII CCWGG 1 cut(s) 64
EcoT22I ATGCAT 1 cut(s) 172
FaeI CATG 2 cut(s) 17, 245
FaiI YATR 3 cut(s) 15, 130, 243
FalI AAGNNNNNCTT 2 cut(s) 74, 106
FatI CATG 2 cut(s) 13, 241
FblI GTMKAC 1 cut(s) 208
Fnu4HI GCNGC 1 cut(s) 147
FokI GGATG 2 cut(s) 82, 86
Fsp4HI GCNGC 1 cut(s) 147
FspBI CTAG 3 cut(s) 194, 204, 280
GluI GCNGC 1 cut(s) 147
Hin1II CATG 2 cut(s) 17, 245
HincII GTYRAC 1 cut(s) 209
HindII GTYRAC 1 cut(s) 209
HinfI GANTC 1 cut(s) 257
Hpy166II GTNNAC 4 cut(s) 22, 98, 209, 273
Hpy188I TCNGA 1 cut(s) 187
Hpy8I GTNNAC 4 cut(s) 22, 98, 209, 273
HpyAV CCTTC 2 cut(s) 15, 76
HpyCH4V TGCA 3 cut(s) 50, 170, 273
HpyF10VI GCNNNNNNNGC 1 cut(s) 270
HpyF3I CTNAG 3 cut(s) 25, 151, 267
Hsp92II CATG 2 cut(s) 17, 245
LmnI GCTCC 1 cut(s) 161
LpnPI CCDG 3 cut(s) 51, 78, 126
Lsp1109I GCAGC 1 cut(s) 133
LweI GCATC 2 cut(s) 157, 179
MaeI CTAG 3 cut(s) 194, 204, 280
MhlI GDGCHC 1 cut(s) 275
MnlI CCTC 1 cut(s) 151
Mph1103I ATGCAT 1 cut(s) 172
MseI TTAA 2 cut(s) 56, 222
MslI CAYNNNNRTG 1 cut(s) 175
MspR9I CCNGG 1 cut(s) 66
MvaI CCWGG 1 cut(s) 66
MwoI GCNNNNNNNGC 1 cut(s) 270
NlaIII CATG 2 cut(s) 17, 245
NsiI ATGCAT 1 cut(s) 172
PfeI GAWTC 1 cut(s) 257
PkrI GCNGC 1 cut(s) 148
Psp6I CCWGG 1 cut(s) 64
PspGI CCWGG 1 cut(s) 64
RsaI GTAC 2 cut(s) 23, 97
RsaNI GTAC 2 cut(s) 22, 96
RseI CAYNNNNRTG 1 cut(s) 175
SalI GTCGAC 1 cut(s) 207
SaqAI TTAA 2 cut(s) 56, 222
SatI GCNGC 1 cut(s) 147
ScrFI CCNGG 1 cut(s) 66
SduI GDGCHC 1 cut(s) 275
SetI ASST 7 cut(s) 37, 67, 87, 166, 205, 232, 281
SfaNI GCATC 2 cut(s) 157, 179
SmiMI CAYNNNNRTG 1 cut(s) 175
SmlI CTYRAG 1 cut(s) 91
SmoI CTYRAG 1 cut(s) 91
SsiI CCGC 1 cut(s) 217
SspMI CTAG 3 cut(s) 194, 204, 280
StyD4I CCNGG 1 cut(s) 64
TaqI TCGA 2 cut(s) 173, 208
TatI WGTACW 2 cut(s) 21, 95
TfiI GAWTC 1 cut(s) 257
Tru1I TTAA 2 cut(s) 56, 222
Tru9I TTAA 2 cut(s) 56, 222
TscAI CASTG 1 cut(s) 271
TseI GCWGC 1 cut(s) 146
TspRI CASTG 1 cut(s) 271
VneI GTGCAC 1 cut(s) 271
XmiI GTMKAC 1 cut(s) 208
XspI CTAG 3 cut(s) 194, 204, 280
Zsp2I ATGCAT 1 cut(s) 172
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.