Rmu_sc0000258.1_g000090

Zeaxanthin epoxidase, chloroplastic-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000258.1
OG0000348
Physical Location & Seq
Reverse (-)
411749 .. 420602
8854 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000258.1_g000090.1.cds

Sequence Viewer

Length: 1596 bp
atgcaagtagtagaggacgttgtgattgtgggagctggaatttctggcctcacaaccgccctgggacttcacaggctgggcatcaggagcttagtgctggaatcttttgatagcttgaggataacagggtttgcactcacaacatggactaatgcgtggaaggctttagatgccattggtgttggtgatcatttacggcagcaacacctggctcttcttgggaatgtggttttctcgagaatttcagggcttcagatgtctgaaatgtcacttaaggggaaaggaaaacaagaatgcggcgatgccggtgaaactcttttgctacctgggtacaaaaatttcggatcatttgctatctgggttggtgctttgagctccaaagatgagtccttttgcaatctggcttggattctccttccacacctcaaattgcatcatgaaacttggaggggttcatcatcaaggaatgggctttcgatcaaggatggtttcatggccggtggtggccagaattggaagaaatcagtgaaaatctgcaacaataaaattccaagccttgattcgttcttctccggccaaatcaccgtgacccacgaccacaggcgtgtagaggaggaggacgtgtgtcgatcaagaccggtggatcattaccatgaaattcgttgtgtgaaacggaagtcgctgttagaagcccttgcgagtgaacttcctaggggcaccattaggttctcttcaaaggttgtttccattgaggaatcaggctactttaagctggtgcatcttgccgacggaaccatcctcaaagccaaggttttggttggatgtgacggagtaaattcagtggttgcaaaatggctgggcttcaagcctccggtctttacaggaagatctgccgttcgaggtagtgctgagttcaagagcagccatgagtttgatcccatgttcatgcagtactttgggaatggtgttagatctggtgtagttccttgtgatgataaaaatgtttactggtacttcacttggtctccctccagccaagagaaagagctagaagaaaacccagctcagttgaagcaatatgtgttaagcaagctcggaaaggtatcagatgaagtaagggccgttatggaaaacactgatttggttgcttttatattctctccattgagatataggcatccttgggaacttctttggggaaatattagcaaaggtaatgtatgtgtagctggagacgcgctccaccccatgaccccagacattggacaaggtggctgtgctgcattagaggacggtattgtattagcaaggtgtctcggtgaggccttgttgaagaatcggagccaagaaattagagatgaaggtgaagaaggaaaagtggaatataaaatgattgaaagagggttgaataagtatgccagtgagaggaaatggagaagttttgatctcattagtacagcttatgtggttggttttatacaggaggctgatggaaaaataatgactttcttgagggacaagtttttctctccaatcctggccgggttgcggttgaagaaggctgattatgattgtggtaagctcagaagctcttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAD_binding_3

Protein Analysis

531

Amino Acids

58.98

Weight (kDa)

8.6

Isoelectric Point (pI)

38.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000348)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38540 AT5G05320
fragaria_vesca FvH4_1g12561 FvH4_1g12581 FvH4_2g15511 FvH4_2g15511 FvH4_2g15511 FvH4_2g15511 FvH4_2g15511 FvH4_2g15511 FvH4_2g15511 FvH4_2g15511 FvH4_2g15511 FvH4_3g33121 FvH4_3g33122 FvH4_4g08974 FvH4_4g09610 FvH4_7g17841
malus_domestica MD05G1123600.v1.1 MD05G1123700.v1.1
prunus_persica Prupe.8G167400_v2.0.a1 Prupe.8G167500_v2.0.a1 Prupe.8G167700_v2.0.a1 Prupe.8G167700_v2.0.a1
pyrus_communis pycom05g11780 pycom05g11790
rosa_chinensis RchiOBHm_Chr6g0278521 RchiOBHm_Chr6g0278531 RchiOBHm_Chr6g0278551 RchiOBHm_Chr6g0278591 RchiOBHm_Chr6g0278611 RchiOBHm_Chr6g0278671 RchiOBHm_Chr6g0278691 RchiOBHm_Chr6g0278701
rosa_laevigata RLG00000013200 RLG00000013201 RLG00000013203 RLG00000013205 RLG00000013206 RLG00000013210 RLG00000013211 RLG00000013213 RLG00000013216 RLG00000013217
rosa_multiflora Rmu_sc0000258.1_g000072 Rmu_sc0000258.1_g000073 Rmu_sc0000258.1_g000082 Rmu_sc0000258.1_g000083 Rmu_sc0000258.1_g000090 Rmu_sc0000258.1_g000094 Rmu_sc0000258.1_g000096 Rmu_sc0002777.1_g000006 Rmu_sc0002777.1_g000011 Rmu_sc0002777.1_g000019 Rmu_sc0006193.1_g000001 Rmu_sc0034228.1_g000001 Rmu_ssc0000042.1_g000052 Rmu_ssc0000144.1_g000014
rosa_roxburghii Rroxscaffold_7G00189700 Rroxscaffold_7G00189710 Rroxscaffold_7G00189720 Rroxscaffold_7G00189730 Rroxscaffold_7G00189770 Rroxscaffold_7G00189800 Rroxscaffold_7G00189820 Rroxscaffold_7G00189960 Rroxscaffold_7G00190070 Rroxscaffold_7G00190090 Rroxscaffold_7G00190140 Rroxscaffold_7G00190160 Rroxscaffold_7G00190170 Rroxscaffold_7G00190270 Rroxscaffold_7G00190280 Rroxscaffold_7G00190300 Rroxscaffold_7G00190310
rosa_rugosa Rorug02G0222700 Rorug06G0117300 Rorug06G0117400 Rorug06G0117700 Rorug06G0117900 Rorug06G0118000 Rorug06G0118100 Rorug06G0118200
rosa_samantha Rh1BG066900 Rh2BG292300 Rh6BG231700 Rh6BG231800 Rh6BG232000 Rh6BG232300 Rh6BG232500 Rh6CG234100 Rh6CG234200 Rh6CG234300 Rh6CG234700 Rh6DG225400 Rh6DG225500 Rh6DG225800 Rh6DG226000 Rh6DG226300
rosa_wichuraiana Rw0G003090 Rw0G003690 Rw0G021770 Rw4G037090 Rw6G019870 Rw6G019890 Rw6G019900 Rw6G019910 Rw6G019920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 716
AccB7I CCANNNNNTGG 1 cut(s) 1262
AccII CGCG 1 cut(s) 1238
AciI CCGC 3 cut(s) 57, 297, 1549
AclWI GGATC 3 cut(s) 352, 651, 929
AcoI YGGCCR 4 cut(s) 495, 505, 574, 1539
AcsI RAATTY 6 cut(s) 39, 240, 337, 546, 657, 835
AcuI CTGAAG 1 cut(s) 236
AfaI GTAC 4 cut(s) 332, 953, 1013, 1456
AfiI CCNNNNNNNGG 3 cut(s) 1262, 1425, 1548
AflII CTTAAG 1 cut(s) 272
AflIII ACRYGT 1 cut(s) 621
AgeI ACCGGT 1 cut(s) 637
AgsI TTSAA 8 cut(s) 735, 865, 916, 1072, 1333, 1397, 1408, 1555
AjiI CACGTC 1 cut(s) 622
AjnI CCWGG 4 cut(s) 60, 207, 325, 1536
AjuI GAANNNNNNNTTGG 2 cut(s) 544, 576
AleI CACNNNNGTG 1 cut(s) 603
Alw21I GWGCWC 1 cut(s) 377
Alw26I GTCTC 3 cut(s) 1029, 1227, 1319
AlwI GGATC 3 cut(s) 352, 651, 929
Ama87I CYCGRG 1 cut(s) 235
AoxI GGCC 7 cut(s) 46, 495, 505, 574, 1119, 1323, 1539
ApeKI GCWGC 3 cut(s) 199, 921, 1280
ApoI RAATTY 6 cut(s) 39, 240, 337, 546, 657, 835
AsiGI ACCGGT 1 cut(s) 637
AspA2I CCTAGG 1 cut(s) 710
AspLEI GCGC 1 cut(s) 1240
AspS9I GGNCC 1 cut(s) 1119
AsuC2I CCSGG 1 cut(s) 1543
AsuHPI GGTGA 5 cut(s) 197, 320, 574, 1331, 1376
AvaI CYCGRG 1 cut(s) 235
AvrII CCTAGG 1 cut(s) 710
BaeGI GKGCMC 1 cut(s) 719
BalI TGGCCA 1 cut(s) 507
BanI GGYRCC 1 cut(s) 716
BanII GRGCYC 1 cut(s) 377
Bbv12I GWGCWC 1 cut(s) 377
BbvI GCAGC 3 cut(s) 211, 933, 1267
BccI CCATC 3 cut(s) 479, 803, 1484
BceAI ACGGC 3 cut(s) 212, 878, 1106
BciT130I CCWGG 4 cut(s) 62, 209, 327, 1538
BclI TGATCA 1 cut(s) 187
BcnI CCSGG 1 cut(s) 1543
BcoDI GTCTC 3 cut(s) 1029, 1227, 1319
BfaI CTAG 2 cut(s) 711, 1049
BfrI CTTAAG 1 cut(s) 272
BglII AGATCT 2 cut(s) 887, 971
BisI GCNGC 4 cut(s) 200, 298, 922, 1281
BlnI CCTAGG 1 cut(s) 710
BlsI GCNGC 4 cut(s) 201, 299, 923, 1282
BmcAI AGTACT 1 cut(s) 953
Bme1390I CCNGG 5 cut(s) 62, 209, 327, 1538, 1543
BmeT110I CYCGRG 1 cut(s) 235
BmgBI CACGTC 1 cut(s) 622
BmgT120I GGNCC 1 cut(s) 1119
BmiI GGNNCC 3 cut(s) 718, 793, 1343
BmrFI CCNGG 5 cut(s) 62, 209, 327, 1538, 1543
BmsI GCATC 6 cut(s) 90, 160, 292, 442, 787, 1186
BoxI GACNNNNGTC 1 cut(s) 624
BplI GAGNNNNNCTC 2 cut(s) 1224, 1256
BpmI CTGGAG 2 cut(s) 1015, 1251
BpuEI CTTGAG 2 cut(s) 136, 1531
BpuMI CCSGG 1 cut(s) 1543
BsaI GGTCTC 1 cut(s) 1029
BsaJI CCNNGG 6 cut(s) 60, 61, 326, 710, 807, 1181
BsaWI WCCGGW 2 cut(s) 637, 871
BsaXI ACNNNNNCTCC 4 cut(s) 608, 638, 1009, 1039
Bsc4I CCNNNNNNNGG 3 cut(s) 1262, 1425, 1548
Bse118I RCCGGY 3 cut(s) 305, 497, 637
Bse1I ACTGG 2 cut(s) 1013, 1419
BseBI CCWGG 4 cut(s) 62, 209, 327, 1538
BseDI CCNNGG 6 cut(s) 60, 61, 326, 710, 807, 1181
BseGI GGATG 4 cut(s) 490, 795, 827, 1177
BseLI CCNNNNNNNGG 3 cut(s) 1262, 1425, 1548
BseMII CTCAG 2 cut(s) 900, 1079
BseNI ACTGG 2 cut(s) 1013, 1419
BseRI GAGGAG 2 cut(s) 626, 629
BseSI GKGCMC 1 cut(s) 719
BseXI GCAGC 3 cut(s) 211, 933, 1267
BseYI CCCAGC 3 cut(s) 76, 856, 1060
Bsh1236I CGCG 1 cut(s) 1238
BshFI GGCC 7 cut(s) 48, 497, 507, 576, 1121, 1325, 1541
BshNI GGYRCC 1 cut(s) 716
BshTI ACCGGT 1 cut(s) 637
BsiHKAI GWGCWC 1 cut(s) 377
BsiHKCI CYCGRG 1 cut(s) 235
BsiSI CCGG 6 cut(s) 306, 498, 573, 638, 872, 1542
BslFI GGGAC 2 cut(s) 78, 1529
BslI CCNNNNNNNGG 3 cut(s) 1262, 1425, 1548
BsmAI GTCTC 3 cut(s) 1029, 1227, 1319
BsmBI CGTCTC 1 cut(s) 1227
BsmFI GGGAC 2 cut(s) 78, 1529
BsmI GAATGC 1 cut(s) 299
BsnI GGCC 7 cut(s) 48, 497, 507, 576, 1121, 1325, 1541
Bso31I GGTCTC 1 cut(s) 1029
BsoBI CYCGRG 1 cut(s) 235
Bsp1286I GDGCHC 2 cut(s) 377, 719
Bsp143I GATC 9 cut(s) 187, 344, 477, 629, 643, 887, 934, 971, 1444
BspACI CCGC 3 cut(s) 57, 297, 1549
BspANI GGCC 7 cut(s) 48, 497, 507, 576, 1121, 1325, 1541
BspCNI CTCAG 3 cut(s) 901, 1078, 1596
BspFNI CGCG 1 cut(s) 1238
BspHI TCATGA 1 cut(s) 436
BspLI GGNNCC 3 cut(s) 718, 793, 1343
BspPI GGATC 3 cut(s) 352, 651, 929
BspQI GCTCTTC 1 cut(s) 219
BspT107I GGYRCC 1 cut(s) 716
BspTI CTTAAG 1 cut(s) 272
BspTNI GGTCTC 1 cut(s) 1029
BsrFI RCCGGY 3 cut(s) 305, 497, 637
BsrI ACTGG 2 cut(s) 1013, 1419
BssAI RCCGGY 3 cut(s) 305, 497, 637
BssECI CCNNGG 6 cut(s) 60, 61, 326, 710, 807, 1181
BssMI GATC 9 cut(s) 187, 344, 477, 629, 643, 887, 934, 971, 1444
BssT1I CCWWGG 3 cut(s) 710, 807, 1181
Bst2UI CCWGG 4 cut(s) 62, 209, 327, 1538
Bst4CI ACNGT 2 cut(s) 586, 1295
Bst6I CTCTTC 2 cut(s) 219, 736
BstAFI CTTAAG 1 cut(s) 272
BstC8I GCNNGC 1 cut(s) 1091
BstDEI CTNAG 4 cut(s) 91, 909, 1065, 1583
BstF5I GGATG 4 cut(s) 490, 795, 827, 1177
BstFNI CGCG 1 cut(s) 1238
BstHHI GCGC 1 cut(s) 1240
BstKTI GATC 9 cut(s) 190, 347, 480, 632, 646, 890, 937, 974, 1447
BstMAI GTCTC 3 cut(s) 1029, 1227, 1319
BstMBI GATC 9 cut(s) 187, 344, 477, 629, 643, 887, 934, 971, 1444
BstMWI GCNNNNNNNGC 4 cut(s) 87, 161, 170, 1235
BstNI CCWGG 4 cut(s) 62, 209, 327, 1538
BstPAI GACNNNNGTC 1 cut(s) 624
BstSCI CCNGG 5 cut(s) 60, 207, 325, 1536, 1541
BstSLI GKGCMC 1 cut(s) 719
BstUI CGCG 1 cut(s) 1238
BstV1I GCAGC 3 cut(s) 211, 933, 1267
BstX2I RGATCY 2 cut(s) 887, 971
BstXI CCANNNNNNTGG 1 cut(s) 814
BstYI RGATCY 2 cut(s) 887, 971
BsuRI GGCC 7 cut(s) 48, 497, 507, 576, 1121, 1325, 1541
BtgZI GCGATG 1 cut(s) 315
BtrI CACGTC 1 cut(s) 622
BtsCI GGATG 4 cut(s) 490, 795, 827, 1177
BtsIMutI CAGTG 4 cut(s) 531, 846, 1134, 1426
Cac8I GCNNGC 1 cut(s) 1091
CciI TCATGA 1 cut(s) 436
CfoI GCGC 1 cut(s) 1240
Cfr10I RCCGGY 3 cut(s) 305, 497, 637
Cfr13I GGNCC 1 cut(s) 1119
CseI GACGC 1 cut(s) 1244
Csp6I GTAC 4 cut(s) 331, 952, 1012, 1455
CspAI ACCGGT 1 cut(s) 637
CspCI CAANNNNNGTGG 2 cut(s) 621, 656
CviAII CATG 8 cut(s) 144, 437, 493, 653, 926, 940, 946, 1249
CviQI GTAC 4 cut(s) 331, 952, 1012, 1455
DdeI CTNAG 4 cut(s) 91, 909, 1065, 1583
DpnI GATC 9 cut(s) 189, 346, 479, 631, 645, 889, 936, 973, 1446
DpnII GATC 9 cut(s) 187, 344, 477, 629, 643, 887, 934, 971, 1444
EaeI YGGCCR 4 cut(s) 495, 505, 574, 1539
Eam1104I CTCTTC 2 cut(s) 219, 736
EarI CTCTTC 2 cut(s) 219, 736
Ecl136II GAGCTC 1 cut(s) 375
Eco130I CCWWGG 3 cut(s) 710, 807, 1181
Eco147I AGGCCT 1 cut(s) 1325
Eco24I GRGCYC 1 cut(s) 377
Eco31I GGTCTC 1 cut(s) 1029
Eco53kI GAGCTC 1 cut(s) 375
Eco57I CTGAAG 1 cut(s) 236
Eco88I CYCGRG 1 cut(s) 235
EcoICRI GAGCTC 1 cut(s) 375
EcoRII CCWGG 4 cut(s) 60, 207, 325, 1536
EcoT14I CCWWGG 3 cut(s) 710, 807, 1181
EcoT38I GRGCYC 1 cut(s) 377
ErhI CCWWGG 3 cut(s) 710, 807, 1181
Esp3I CGTCTC 1 cut(s) 1227
FaeI CATG 8 cut(s) 147, 440, 496, 656, 929, 943, 949, 1252
FaqI GGGAC 2 cut(s) 78, 1529
FatI CATG 8 cut(s) 143, 436, 492, 652, 925, 939, 945, 1248
FbaI TGATCA 1 cut(s) 187
Fnu4HI GCNGC 4 cut(s) 200, 298, 922, 1281
FokI GGATG 4 cut(s) 497, 782, 834, 1164
FriOI GRGCYC 1 cut(s) 377
Fsp4HI GCNGC 4 cut(s) 200, 298, 922, 1281
FspBI CTAG 2 cut(s) 711, 1049
GlaI GCGC 1 cut(s) 1239
GluI GCNGC 4 cut(s) 200, 298, 922, 1281
GsaI CCCAGC 3 cut(s) 80, 860, 1064
GsuI CTGGAG 2 cut(s) 1015, 1251
HaeIII GGCC 7 cut(s) 48, 497, 507, 576, 1121, 1325, 1541
HapII CCGG 6 cut(s) 306, 498, 573, 638, 872, 1542
HgaI GACGC 1 cut(s) 1244
HhaI GCGC 1 cut(s) 1240
Hin1II CATG 8 cut(s) 147, 440, 496, 656, 929, 943, 949, 1252
Hin6I GCGC 1 cut(s) 1238
HinP1I GCGC 1 cut(s) 1238
HinfI GANTC 6 cut(s) 101, 386, 409, 560, 755, 1336
HpaII CCGG 6 cut(s) 306, 498, 573, 638, 872, 1542
HphI GGTGA 5 cut(s) 197, 320, 574, 1331, 1376
Hpy166II GTNNAC 2 cut(s) 704, 1006
Hpy188I TCNGA 7 cut(s) 255, 262, 344, 1097, 1108, 1341, 1586
Hpy188III TCNNGA 7 cut(s) 85, 235, 237, 437, 633, 916, 1510
Hpy8I GTNNAC 2 cut(s) 704, 1006
Hpy99I CGWCG 1 cut(s) 791
HpyAV CCTTC 5 cut(s) 154, 425, 1355, 1364, 1552
HpyCH4III ACNGT 2 cut(s) 586, 1295
HpyCH4IV ACGT 2 cut(s) 18, 621
HpyCH4V TGCA 9 cut(s) 4, 134, 396, 433, 537, 778, 848, 949, 1283
HpyF10VI GCNNNNNNNGC 4 cut(s) 87, 161, 170, 1235
HpyF3I CTNAG 4 cut(s) 91, 909, 1065, 1583
HpySE526I ACGT 2 cut(s) 18, 621
Hsp92II CATG 8 cut(s) 147, 440, 496, 656, 929, 943, 949, 1252
HspAI GCGC 1 cut(s) 1238
Ksp22I TGATCA 1 cut(s) 187
Kzo9I GATC 9 cut(s) 187, 344, 477, 629, 643, 887, 934, 971, 1444
LguI GCTCTTC 1 cut(s) 219
LmnI GCTCC 5 cut(s) 32, 87, 380, 1245, 1341
Lsp1109I GCAGC 3 cut(s) 211, 933, 1267
LweI GCATC 6 cut(s) 90, 160, 292, 442, 787, 1186
MaeI CTAG 2 cut(s) 711, 1049
MaeII ACGT 2 cut(s) 18, 621
MaeIII GTNAC 3 cut(s) 267, 586, 824
MalI GATC 9 cut(s) 189, 346, 479, 631, 645, 889, 936, 973, 1446
MboI GATC 9 cut(s) 187, 344, 477, 629, 643, 887, 934, 971, 1444
MboII GAAGA 9 cut(s) 206, 529, 559, 723, 897, 1064, 1345, 1379, 1567
MflI RGATCY 2 cut(s) 887, 971
MhlI GDGCHC 2 cut(s) 377, 719
MlsI TGGCCA 1 cut(s) 507
MluCI AATT 9 cut(s) 39, 240, 337, 428, 511, 546, 657, 835, 1350
MluNI TGGCCA 1 cut(s) 507
MlyI GAGTC 1 cut(s) 395
MmeI TCCRAC 1 cut(s) 799
Mox20I TGGCCA 1 cut(s) 507
MscI TGGCCA 1 cut(s) 507
MseI TTAA 4 cut(s) 273, 768, 1085, 1594
MslI CAYNNNNRTG 3 cut(s) 603, 651, 944
Msp20I TGGCCA 1 cut(s) 507
MspCI CTTAAG 1 cut(s) 272
MspI CCGG 6 cut(s) 306, 498, 573, 638, 872, 1542
MspR9I CCNGG 5 cut(s) 62, 209, 327, 1538, 1543
Mva1269I GAATGC 1 cut(s) 299
MvaI CCWGG 4 cut(s) 62, 209, 327, 1538
MvnI CGCG 1 cut(s) 1238
MwoI GCNNNNNNNGC 4 cut(s) 87, 161, 170, 1235
NciI CCSGG 1 cut(s) 1543
NdeII GATC 9 cut(s) 187, 344, 477, 629, 643, 887, 934, 971, 1444
NlaIII CATG 8 cut(s) 147, 440, 496, 656, 929, 943, 949, 1252
NlaIV GGNNCC 3 cut(s) 718, 793, 1343
NmuCI GTSAC 3 cut(s) 267, 586, 824
OliI CACNNNNGTG 1 cut(s) 603
PaeR7I CTCGAG 1 cut(s) 235
PagI TCATGA 1 cut(s) 436
PasI CCCWGGG 1 cut(s) 61
PceI AGGCCT 1 cut(s) 1325
PciSI GCTCTTC 1 cut(s) 219
PctI GAATGC 1 cut(s) 299
PfeI GAWTC 5 cut(s) 101, 409, 560, 755, 1336
PflMI CCANNNNNTGG 1 cut(s) 1262
PinAI ACCGGT 1 cut(s) 637
PkrI GCNGC 4 cut(s) 201, 299, 923, 1282
PleI GAGTC 1 cut(s) 394
PpsI GAGTC 1 cut(s) 394
PshAI GACNNNNGTC 1 cut(s) 624
Psp124BI GAGCTC 1 cut(s) 377
Psp6I CCWGG 4 cut(s) 60, 207, 325, 1536
PspFI CCCAGC 3 cut(s) 76, 856, 1060
PspGI CCWGG 4 cut(s) 60, 207, 325, 1536
PspN4I GGNNCC 3 cut(s) 718, 793, 1343
PspPI GGNCC 1 cut(s) 1119
PsuI RGATCY 2 cut(s) 887, 971
RsaI GTAC 4 cut(s) 332, 953, 1013, 1456
RsaNI GTAC 4 cut(s) 331, 952, 1012, 1455
RseI CAYNNNNRTG 3 cut(s) 603, 651, 944
SacI GAGCTC 1 cut(s) 377
SapI GCTCTTC 1 cut(s) 219
SaqAI TTAA 4 cut(s) 273, 768, 1085, 1594
SatI GCNGC 4 cut(s) 200, 298, 922, 1281
Sau3AI GATC 9 cut(s) 187, 344, 477, 629, 643, 887, 934, 971, 1444
Sau96I GGNCC 1 cut(s) 1119
ScaI AGTACT 1 cut(s) 953
SchI GAGTC 1 cut(s) 395
ScrFI CCNGG 5 cut(s) 62, 209, 327, 1538, 1543
SduI GDGCHC 2 cut(s) 377, 719
SfaNI GCATC 6 cut(s) 90, 160, 292, 442, 787, 1186
Sfr274I CTCGAG 1 cut(s) 235
SlaI CTCGAG 1 cut(s) 235
SmiMI CAYNNNNRTG 3 cut(s) 603, 651, 944
SmlI CTYRAG 4 cut(s) 115, 235, 272, 1510
SmoI CTYRAG 4 cut(s) 115, 235, 272, 1510
Sse9I AATT 9 cut(s) 39, 240, 337, 428, 511, 546, 657, 835, 1350
SseBI AGGCCT 1 cut(s) 1325
SsiI CCGC 3 cut(s) 57, 297, 1549
SspI AATATT 1 cut(s) 1204
SspMI CTAG 2 cut(s) 711, 1049
SstI GAGCTC 1 cut(s) 377
StuI AGGCCT 1 cut(s) 1325
StyD4I CCNGG 5 cut(s) 60, 207, 325, 1536, 1541
StyI CCWWGG 3 cut(s) 710, 807, 1181
TaaI ACNGT 2 cut(s) 586, 1295
TaiI ACGT 2 cut(s) 21, 624
TaqI TCGA 4 cut(s) 236, 476, 628, 898
TasI AATT 9 cut(s) 39, 240, 337, 428, 511, 546, 657, 835, 1350
TatI WGTACW 2 cut(s) 951, 1454
TauI GCSGC 1 cut(s) 300
TfiI GAWTC 5 cut(s) 101, 409, 560, 755, 1336
Tru1I TTAA 4 cut(s) 273, 768, 1085, 1594
Tru9I TTAA 4 cut(s) 273, 768, 1085, 1594
TscAI CASTG 4 cut(s) 531, 846, 1141, 1426
TseFI GTSAC 3 cut(s) 267, 586, 824
TseI GCWGC 3 cut(s) 199, 921, 1280
Tsp45I GTSAC 3 cut(s) 267, 586, 824
TspDTI ATGAA 7 cut(s) 444, 453, 481, 669, 934, 1125, 1374
TspGWI ACGGA 3 cut(s) 688, 804, 843
TspRI CASTG 4 cut(s) 531, 846, 1141, 1426
Van91I CCANNNNNTGG 1 cut(s) 1262
Vha464I CTTAAG 1 cut(s) 272
XapI RAATTY 6 cut(s) 39, 240, 337, 546, 657, 835
XhoI CTCGAG 1 cut(s) 235
XmaJI CCTAGG 1 cut(s) 710
XspI CTAG 2 cut(s) 711, 1049
ZrmI AGTACT 1 cut(s) 953
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.