Rorug06G0118000

Zeaxanthin epoxidase, chloroplastic-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0000348
Physical Location & Seq
Forward (+)
16141066 .. 16144303
3238 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0118000.1

Sequence Viewer

Length: 1614 bp
ATGGCTGACCGGAGAGCTGAAGAAAATGTCGTCTCCGGCCAACCCATCCAGAAAACCATTGCGGATTTCGATCCCGCTCCCAAACCCAAGAGAAACAAGTACGCTTTTGCTTGTGCTATGTTGGCTTCCATGACTTCTATCCTACTCGGTTATGATATTGGGGTAATGAGTGGAGCGGCGATCTACATCAAAGACGACCTCCATGTCTCCGACGTGCAGATCGAAGTTCTAGTAGGAATTCTGAATCTCTACTGCCTCATCGGCTCCGCCGCCGCCGGCAGGACGTCCGACTGGATTGGACGTCGGTATACCATAGTCCTCGCCGGAGCCATCTTCTTCGCCGGAGCTCTTCTCATGGGCTTCGCCACCAACTACTCCTTCCTCATGTTCGGGAGGTTTGTTGCCGGAGTCGGCGTTGGTTATGCCCTCATGATTGCTCCTGTCTACACCGCCGAAGTTTCTCCGGCGTCGTCTCGTGGTTTCCTCACGTCTTTCCCTGAGGTGTTTATCAATGCCGGAATCTTATTGGGGTACATATCCAACTGGGCATTCTCCAAGCTCGCACTTAACCTAGGCTGGCGTCTCATGCTCGGCGTCGGTGCAATACCCTCCGTCTTCCTCGCCCTCGGCGTCTTAGCCATGCCGGAATCCCCTCGCTGGCTCGTCATGCAGGGCCGCCTCGGCGACGCCAAGAGAGTCCTCGACCGAACTTCAGACTCCATGGAAGAGTCCAAACTCCGACTCGCCGACATCAAAGAAGCCGCCGGAATCCCCGAGCACTGCAACGAGGACGTCGTTCAAGTCCCAAAACGCAGCCACGGTGAAGACGTCTGGAAAGAGCTCATACTCCGCCCGACCCCCGCCATCCGTCACATTCTCATCGCCGCCGTCGGTATACACTTCTTCCAACAAGCCTCAGGCATCGACGCCGTCGTTTTGTACAGCCCGAGAATCTTCAAAAAGGCCGGAATCAAGGCCAAGGACAAACTCCTCCTCGCCACCATAGCCGTCGGATCCGTCAAGACAGTCTTCATCCTCGTCGCAACGTTTCATCTGGACAGGATAGGACGCCGTCCTTTGCTTCTTACCAGCGTAGCAGGGATGATAGCCTCACTCGGTTGTCTCGGTTTCAGCCTCACCATCATCGACCACAGCGACGAGAAGATCATGTGGGCCCTTGTTCTCTCCATCACCATGGTCTTATTCTACGTCGCGTTCTTCTCCATCGGAATGGGCCCCATCACTTGGGTCTACAGCTCCGAGATCTTCCCGTTAAAGCTACGAGCTCAGGGGTGTAGTATTGGAGTCGCCGTCAACAGAGTCGTCAGTGGGATAATCTCAATGACTTTTATATCCCTGTACGAGGCCATAACTATTGGCGGAGCCTTCTTTCTTTTCGCCGGAATTGCGGCGGTTGGCTGGGTGTTCTTCTATACAATGCTACCGGAGACACGAGGGAGAACCCTTGAAGATATGGAAGTCCTTTTTGGGAAGTTCCACAAGTGGAAAGAGGCCAATGCCCTGCTCAAAAACAAGCAGGTGGATCCTAATAGTAATGGAAACGACACCGCCAGCGGCGGTCAGGTTCAATTAGGAACAAAAGGGCAAGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAD_binding_3

Protein Analysis

537

Amino Acids

58.29

Weight (kDa)

8.99

Isoelectric Point (pI)

33.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sugar_tr PF00083 39 - 496 5.6e-111 Sugar (and other) transporter
MFS_1 PF07690 45 - 445 3.1e-32 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000348)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38540 AT5G05320
fragaria_vesca FvH4_1g12561 FvH4_1g12581 FvH4_2g15511 FvH4_2g15511 FvH4_2g15511 FvH4_2g15511 FvH4_2g15511 FvH4_2g15511 FvH4_2g15511 FvH4_2g15511 FvH4_2g15511 FvH4_3g33121 FvH4_3g33122 FvH4_4g08974 FvH4_4g09610 FvH4_7g17841
malus_domestica MD05G1123600.v1.1 MD05G1123700.v1.1
prunus_persica Prupe.8G167400_v2.0.a1 Prupe.8G167500_v2.0.a1 Prupe.8G167700_v2.0.a1 Prupe.8G167700_v2.0.a1
pyrus_communis pycom05g11780 pycom05g11790
rosa_chinensis RchiOBHm_Chr6g0278521 RchiOBHm_Chr6g0278531 RchiOBHm_Chr6g0278551 RchiOBHm_Chr6g0278591 RchiOBHm_Chr6g0278611 RchiOBHm_Chr6g0278671 RchiOBHm_Chr6g0278691 RchiOBHm_Chr6g0278701
rosa_laevigata RLG00000013200 RLG00000013201 RLG00000013203 RLG00000013205 RLG00000013206 RLG00000013210 RLG00000013211 RLG00000013213 RLG00000013216 RLG00000013217
rosa_multiflora Rmu_sc0000258.1_g000072 Rmu_sc0000258.1_g000073 Rmu_sc0000258.1_g000082 Rmu_sc0000258.1_g000083 Rmu_sc0000258.1_g000090 Rmu_sc0000258.1_g000094 Rmu_sc0000258.1_g000096 Rmu_sc0002777.1_g000006 Rmu_sc0002777.1_g000011 Rmu_sc0002777.1_g000019 Rmu_sc0006193.1_g000001 Rmu_sc0034228.1_g000001 Rmu_ssc0000042.1_g000052 Rmu_ssc0000144.1_g000014
rosa_roxburghii Rroxscaffold_7G00189700 Rroxscaffold_7G00189710 Rroxscaffold_7G00189720 Rroxscaffold_7G00189730 Rroxscaffold_7G00189770 Rroxscaffold_7G00189800 Rroxscaffold_7G00189820 Rroxscaffold_7G00189960 Rroxscaffold_7G00190070 Rroxscaffold_7G00190090 Rroxscaffold_7G00190140 Rroxscaffold_7G00190160 Rroxscaffold_7G00190170 Rroxscaffold_7G00190270 Rroxscaffold_7G00190280 Rroxscaffold_7G00190300 Rroxscaffold_7G00190310
rosa_rugosa Rorug02G0222700 Rorug06G0117300 Rorug06G0117400 Rorug06G0117700 Rorug06G0117900 Rorug06G0118000 Rorug06G0118100 Rorug06G0118200
rosa_samantha Rh1BG066900 Rh2BG292300 Rh6BG231700 Rh6BG231800 Rh6BG232000 Rh6BG232300 Rh6BG232500 Rh6CG234100 Rh6CG234200 Rh6CG234300 Rh6CG234700 Rh6DG225400 Rh6DG225500 Rh6DG225800 Rh6DG226000 Rh6DG226300
rosa_wichuraiana Rw0G003090 Rw0G003690 Rw0G021770 Rw4G037090 Rw6G019870 Rw6G019890 Rw6G019900 Rw6G019910 Rw6G019920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1528
AasI GACNNNNNNGTC 1 cut(s) 203
AatII GACGTC 4 cut(s) 287, 304, 795, 831
Acc36I ACCTGC 1 cut(s) 1528
AccB7I CCANNNNNTGG 1 cut(s) 1245
AccBSI CCGCTC 2 cut(s) 77, 176
AccI GTMKAC 4 cut(s) 308, 444, 895, 1251
AccII CGCG 1 cut(s) 1214
AclI AACGTT 1 cut(s) 1046
AclWI GGATC 5 cut(s) 65, 1008, 1021, 1538, 1551
AcoI YGGCCR 1 cut(s) 37
AcsI RAATTY 1 cut(s) 237
AcuI CTGAAG 2 cut(s) 39, 696
AfaI GTAC 4 cut(s) 101, 533, 941, 1361
AfiI CCNNNNNNNGG 4 cut(s) 279, 657, 1245, 1363
AgsI TTSAA 4 cut(s) 800, 958, 1469, 1589
AjiI CACGTC 2 cut(s) 214, 489
AjuI GAANNNNNNNTTGG 6 cut(s) 362, 394, 533, 565, 1470, 1502
AluBI AGCT 7 cut(s) 17, 347, 559, 841, 1257, 1279, 1286
AluI AGCT 7 cut(s) 17, 347, 559, 841, 1257, 1279, 1286
Alw21I GWGCWC 4 cut(s) 349, 780, 843, 1288
Alw26I GTCTC 6 cut(s) 37, 211, 477, 587, 1127, 1442
AlwI GGATC 5 cut(s) 65, 1008, 1021, 1538, 1551
Ama87I CYCGRG 2 cut(s) 773, 946
AoxI GGCC 8 cut(s) 37, 673, 963, 975, 1173, 1234, 1365, 1512
ApaI GGGCCC 2 cut(s) 1177, 1238
ApeKI GCWGC 1 cut(s) 813
ApoI RAATTY 1 cut(s) 237
AspA2I CCTAGG 1 cut(s) 571
AspS9I GGNCC 5 cut(s) 673, 1173, 1174, 1234, 1235
AsuHPI GGTGA 3 cut(s) 833, 1129, 1183
AvaI CYCGRG 2 cut(s) 773, 946
AvrII CCTAGG 1 cut(s) 571
AxyI CCTNAGG 2 cut(s) 498, 916
BaeGI GKGCMC 2 cut(s) 1177, 1238
BamHI GGATCC 2 cut(s) 1013, 1543
BanII GRGCYC 5 cut(s) 349, 843, 1177, 1238, 1288
BauI CACGAG 2 cut(s) 474, 1452
BbsI GAAGAC 3 cut(s) 607, 831, 1021
Bbv12I GWGCWC 4 cut(s) 349, 780, 843, 1288
BbvI GCAGC 1 cut(s) 825
BccI CCATC 7 cut(s) 53, 338, 872, 1148, 1196, 1232, 1247
BceAI ACGGC 5 cut(s) 872, 914, 992, 1056, 1295
BcoDI GTCTC 6 cut(s) 37, 211, 477, 587, 1127, 1442
BfaI CTAG 2 cut(s) 230, 572
BfmI CTRYAG 1 cut(s) 1252
BfuAI ACCTGC 1 cut(s) 1528
BglI GCCNNNNNGGC 2 cut(s) 261, 681
BglII AGATCT 1 cut(s) 1263
BisI GCNGC 9 cut(s) 177, 270, 273, 676, 762, 814, 885, 1410, 1576
BlnI CCTAGG 1 cut(s) 571
BlsI GCNGC 9 cut(s) 178, 271, 274, 677, 763, 815, 886, 1411, 1577
BmeT110I CYCGRG 2 cut(s) 773, 946
BmgBI CACGTC 2 cut(s) 214, 489
BmgT120I GGNCC 5 cut(s) 673, 1173, 1174, 1234, 1235
BmiI GGNNCC 8 cut(s) 265, 328, 1015, 1175, 1236, 1237, 1384, 1545
BmrI ACTGGG 1 cut(s) 553
BmsI GCATC 1 cut(s) 930
BmuI ACTGGG 1 cut(s) 553
BpiI GAAGAC 3 cut(s) 607, 831, 1021
BplI GAGNNNNNCTC 2 cut(s) 336, 368
Bpu10I CCTNAGC 1 cut(s) 1287
BsaBI GATNNNNATC 2 cut(s) 69, 185
BsaJI CCNNGG 7 cut(s) 571, 625, 679, 720, 817, 978, 1194
BsaWI WCCGGW 2 cut(s) 9, 1444
BsaXI ACNNNNNCTCC 4 cut(s) 399, 429, 1296, 1326
Bsc4I CCNNNNNNNGG 4 cut(s) 279, 657, 1245, 1363
Bse118I RCCGGY 1 cut(s) 275
Bse1I ACTGG 2 cut(s) 296, 548
Bse21I CCTNAGG 2 cut(s) 498, 916
Bse3DI GCAATG 1 cut(s) 57
Bse8I GATNNNNATC 2 cut(s) 69, 185
BseDI CCNNGG 7 cut(s) 571, 625, 679, 720, 817, 978, 1194
BseGI GGATG 4 cut(s) 45, 864, 1032, 1107
BseJI GATNNNNATC 2 cut(s) 69, 185
BseLI CCNNNNNNNGG 4 cut(s) 279, 657, 1245, 1363
BseMI GCAATG 1 cut(s) 57
BseMII CTCAG 3 cut(s) 489, 930, 1301
BseNI ACTGG 2 cut(s) 296, 548
BseRI GAGGAG 2 cut(s) 980, 983
BseSI GKGCMC 2 cut(s) 1177, 1238
BseXI GCAGC 1 cut(s) 825
BseYI CCCAGC 1 cut(s) 1419
BsgI GTGCAG 1 cut(s) 236
Bsh1236I CGCG 1 cut(s) 1214
Bsh1285I CGRYCG 1 cut(s) 706
BshFI GGCC 8 cut(s) 39, 675, 965, 977, 1175, 1236, 1367, 1514
BsiEI CGRYCG 1 cut(s) 706
BsiHKAI GWGCWC 4 cut(s) 349, 780, 843, 1288
BsiHKCI CYCGRG 2 cut(s) 773, 946
BslFI GGGAC 1 cut(s) 788
BslI CCNNNNNNNGG 4 cut(s) 279, 657, 1245, 1363
BsmAI GTCTC 6 cut(s) 37, 211, 477, 587, 1127, 1442
BsmBI CGTCTC 3 cut(s) 37, 477, 587
BsmFI GGGAC 1 cut(s) 788
BsmI GAATGC 1 cut(s) 548
BsnI GGCC 8 cut(s) 39, 675, 965, 977, 1175, 1236, 1367, 1514
BsoBI CYCGRG 2 cut(s) 773, 946
Bsp120I GGGCCC 2 cut(s) 1173, 1234
Bsp1286I GDGCHC 6 cut(s) 349, 780, 843, 1177, 1238, 1288
Bsp1407I TGTACA 1 cut(s) 939
Bsp143I GATC 7 cut(s) 70, 180, 219, 1013, 1164, 1263, 1543
Bsp19I CCATGG 2 cut(s) 720, 1194
BspANI GGCC 8 cut(s) 39, 675, 965, 977, 1175, 1236, 1367, 1514
BspCNI CTCAG 3 cut(s) 490, 929, 1300
BspFNI CGCG 1 cut(s) 1214
BspHI TCATGA 1 cut(s) 429
BspLI GGNNCC 8 cut(s) 265, 328, 1015, 1175, 1236, 1237, 1384, 1545
BspMI ACCTGC 1 cut(s) 1528
BspPI GGATC 5 cut(s) 65, 1008, 1021, 1538, 1551
BspQI GCTCTTC 1 cut(s) 354
BsrBI CCGCTC 2 cut(s) 77, 176
BsrDI GCAATG 1 cut(s) 57
BsrFI RCCGGY 1 cut(s) 275
BsrGI TGTACA 1 cut(s) 939
BsrI ACTGG 2 cut(s) 296, 548
BssAI RCCGGY 1 cut(s) 275
BssECI CCNNGG 7 cut(s) 571, 625, 679, 720, 817, 978, 1194
BssMI GATC 7 cut(s) 70, 180, 219, 1013, 1164, 1263, 1543
BssNAI GTATAC 2 cut(s) 309, 896
BssSI CACGAG 2 cut(s) 474, 1452
BssT1I CCWWGG 4 cut(s) 571, 720, 978, 1194
Bst1107I GTATAC 2 cut(s) 309, 896
Bst2BI CACGAG 2 cut(s) 474, 1452
Bst4CI ACNGT 2 cut(s) 821, 1027
Bst6I CTCTTC 2 cut(s) 354, 720
BstAUI TGTACA 1 cut(s) 939
BstC8I GCNNGC 5 cut(s) 277, 561, 578, 659, 1573
BstDEI CTNAG 4 cut(s) 498, 634, 916, 1287
BstDSI CCRYGG 3 cut(s) 720, 817, 1194
BstENI CCTNNNNNAGG 1 cut(s) 1361
BstF5I GGATG 4 cut(s) 45, 864, 1032, 1107
BstFNI CGCG 1 cut(s) 1214
BstKTI GATC 7 cut(s) 73, 183, 222, 1016, 1167, 1266, 1546
BstMAI GTCTC 6 cut(s) 37, 211, 477, 587, 1127, 1442
BstMBI GATC 7 cut(s) 70, 180, 219, 1013, 1164, 1263, 1543
BstMCI CGRYCG 1 cut(s) 706
BstMWI GCNNNNNNNGC 7 cut(s) 122, 261, 586, 667, 681, 1004, 1406
BstSFI CTRYAG 1 cut(s) 1252
BstSLI GKGCMC 2 cut(s) 1177, 1238
BstUI CGCG 1 cut(s) 1214
BstV1I GCAGC 1 cut(s) 825
BstV2I GAAGAC 3 cut(s) 607, 831, 1021
BstX2I RGATCY 3 cut(s) 1013, 1263, 1543
BstXI CCANNNNNNTGG 2 cut(s) 1195, 1231
BstYI RGATCY 3 cut(s) 1013, 1263, 1543
BstZ17I GTATAC 2 cut(s) 309, 896
Bsu36I CCTNAGG 2 cut(s) 498, 916
BsuRI GGCC 8 cut(s) 39, 675, 965, 977, 1175, 1236, 1367, 1514
BtgI CCRYGG 3 cut(s) 720, 817, 1194
BtgZI GCGATG 1 cut(s) 865
BtrI CACGTC 2 cut(s) 214, 489
BtsCI GGATG 4 cut(s) 45, 864, 1032, 1107
BtsI GCAGTG 1 cut(s) 778
BtsIMutI CAGTG 2 cut(s) 778, 1333
BveI ACCTGC 1 cut(s) 1528
Cac8I GCNNGC 5 cut(s) 277, 561, 578, 659, 1573
CciI TCATGA 1 cut(s) 429
Cfr10I RCCGGY 1 cut(s) 275
Cfr13I GGNCC 5 cut(s) 673, 1173, 1174, 1234, 1235
CseI GACGC 7 cut(s) 456, 569, 583, 619, 695, 935, 1077
Csp6I GTAC 4 cut(s) 100, 532, 940, 1360
CviQI GTAC 4 cut(s) 100, 532, 940, 1360
DdeI CTNAG 4 cut(s) 498, 634, 916, 1287
DpnI GATC 7 cut(s) 72, 182, 221, 1015, 1166, 1265, 1545
DpnII GATC 7 cut(s) 70, 180, 219, 1013, 1164, 1263, 1543
DrdI GACNNNNNNGTC 1 cut(s) 203
DseDI GACNNNNNNGTC 1 cut(s) 203
EaeI YGGCCR 1 cut(s) 37
Eam1104I CTCTTC 2 cut(s) 354, 720
EarI CTCTTC 2 cut(s) 354, 720
EciI GGCGGA 3 cut(s) 256, 839, 1395
Ecl136II GAGCTC 3 cut(s) 347, 841, 1286
Eco130I CCWWGG 4 cut(s) 571, 720, 978, 1194
Eco24I GRGCYC 5 cut(s) 349, 843, 1177, 1238, 1288
Eco53kI GAGCTC 3 cut(s) 347, 841, 1286
Eco57I CTGAAG 2 cut(s) 39, 696
Eco81I CCTNAGG 2 cut(s) 498, 916
Eco88I CYCGRG 2 cut(s) 773, 946
EcoICRI GAGCTC 3 cut(s) 347, 841, 1286
EcoNI CCTNNNNNAGG 1 cut(s) 1361
EcoO109I RGGNCCY 2 cut(s) 1174, 1235
EcoRI GAATTC 1 cut(s) 237
EcoT14I CCWWGG 4 cut(s) 571, 720, 978, 1194
EcoT38I GRGCYC 5 cut(s) 349, 843, 1177, 1238, 1288
ErhI CCWWGG 4 cut(s) 571, 720, 978, 1194
Esp3I CGTCTC 3 cut(s) 37, 477, 587
FalI AAGNNNNNCTT 2 cut(s) 1013, 1045
FaqI GGGAC 1 cut(s) 788
FauI CCCGC 2 cut(s) 82, 868
FblI GTMKAC 4 cut(s) 308, 444, 895, 1251
Fnu4HI GCNGC 9 cut(s) 177, 270, 273, 676, 762, 814, 885, 1410, 1576
FokI GGATG 4 cut(s) 32, 851, 1019, 1114
FriOI GRGCYC 5 cut(s) 349, 843, 1177, 1238, 1288
Fsp4HI GCNGC 9 cut(s) 177, 270, 273, 676, 762, 814, 885, 1410, 1576
FspBI CTAG 2 cut(s) 230, 572
GluI GCNGC 9 cut(s) 177, 270, 273, 676, 762, 814, 885, 1410, 1576
GsaI CCCAGC 1 cut(s) 1423
HaeIII GGCC 8 cut(s) 39, 675, 965, 977, 1175, 1236, 1367, 1514
HgaI GACGC 7 cut(s) 456, 569, 583, 619, 695, 935, 1077
HincII GTYRAC 1 cut(s) 1315
HindII GTYRAC 1 cut(s) 1315
HphI GGTGA 3 cut(s) 833, 1129, 1183
Hpy166II GTNNAC 5 cut(s) 309, 445, 896, 1252, 1315
Hpy188I TCNGA 8 cut(s) 211, 243, 289, 715, 740, 1013, 1229, 1261
Hpy188III TCNNGA 6 cut(s) 49, 391, 430, 832, 1021, 1055
Hpy8I GTNNAC 5 cut(s) 309, 445, 896, 1252, 1315
HpyAV CCTTC 2 cut(s) 388, 1396
HpyCH4III ACNGT 2 cut(s) 821, 1027
HpyCH4IV ACGT 8 cut(s) 213, 284, 301, 488, 792, 828, 1046, 1209
HpyCH4V TGCA 4 cut(s) 217, 602, 670, 783
HpyF10VI GCNNNNNNNGC 7 cut(s) 122, 261, 586, 667, 681, 1004, 1406
HpyF3I CTNAG 4 cut(s) 498, 634, 916, 1287
HpySE526I ACGT 8 cut(s) 213, 284, 301, 488, 792, 828, 1046, 1209
KroI GCCGGC 1 cut(s) 275
KroNI GCCGGC 1 cut(s) 277
Kzo9I GATC 7 cut(s) 70, 180, 219, 1013, 1164, 1263, 1543
LguI GCTCTTC 1 cut(s) 354
LmnI GCTCC 8 cut(s) 82, 173, 269, 326, 344, 442, 1262, 1382
Lsp1109I GCAGC 1 cut(s) 825
LweI GCATC 1 cut(s) 930
MaeI CTAG 2 cut(s) 230, 572
MaeII ACGT 8 cut(s) 213, 284, 301, 488, 792, 828, 1046, 1209
MaeIII GTNAC 1 cut(s) 869
MalI GATC 7 cut(s) 72, 182, 221, 1015, 1166, 1265, 1545
MbiI CCGCTC 2 cut(s) 77, 176
MboI GATC 7 cut(s) 70, 180, 219, 1013, 1164, 1263, 1543
MflI RGATCY 3 cut(s) 1013, 1263, 1543
MhlI GDGCHC 6 cut(s) 349, 780, 843, 1177, 1238, 1288
MluCI AATT 3 cut(s) 237, 1404, 1589
MlyI GAGTC 7 cut(s) 417, 705, 710, 735, 737, 1314, 1329
MmeI TCCRAC 6 cut(s) 234, 312, 564, 763, 931, 991
MroNI GCCGGC 1 cut(s) 275
MseI TTAA 2 cut(s) 567, 1274
MslI CAYNNNNRTG 2 cut(s) 1193, 1229
MspA1I CMGCKG 1 cut(s) 1575
Mva1269I GAATGC 1 cut(s) 548
MvnI CGCG 1 cut(s) 1214
MwoI GCNNNNNNNGC 7 cut(s) 122, 261, 586, 667, 681, 1004, 1406
NaeI GCCGGC 1 cut(s) 277
NcoI CCATGG 2 cut(s) 720, 1194
NdeII GATC 7 cut(s) 70, 180, 219, 1013, 1164, 1263, 1543
NgoMIV GCCGGC 1 cut(s) 275
NlaIV GGNNCC 8 cut(s) 265, 328, 1015, 1175, 1236, 1237, 1384, 1545
NmeAIII GCCGAG 3 cut(s) 570, 606, 660
NmuCI GTSAC 1 cut(s) 869
PagI TCATGA 1 cut(s) 429
PaqCI CACCTGC 1 cut(s) 1528
PciSI GCTCTTC 1 cut(s) 354
PcsI WCGNNNNNNNCGW 6 cut(s) 219, 627, 792, 825, 930, 1152
PctI GAATGC 1 cut(s) 548
PdiI GCCGGC 1 cut(s) 277
PfeI GAWTC 6 cut(s) 244, 519, 647, 768, 951, 969
PflFI GACNNNGTC 2 cut(s) 929, 1071
PflMI CCANNNNNTGG 1 cut(s) 1245
PkrI GCNGC 9 cut(s) 178, 271, 274, 677, 763, 815, 886, 1411, 1577
PleI GAGTC 7 cut(s) 416, 704, 710, 735, 736, 1313, 1328
PpsI GAGTC 7 cut(s) 416, 704, 710, 735, 736, 1313, 1328
Psp124BI GAGCTC 3 cut(s) 349, 843, 1288
Psp1406I AACGTT 1 cut(s) 1046
PspFI CCCAGC 1 cut(s) 1419
PspN4I GGNNCC 8 cut(s) 265, 328, 1015, 1175, 1236, 1237, 1384, 1545
PspOMI GGGCCC 2 cut(s) 1173, 1234
PspPI GGNCC 5 cut(s) 673, 1173, 1174, 1234, 1235
PsuI RGATCY 3 cut(s) 1013, 1263, 1543
PsyI GACNNNGTC 2 cut(s) 929, 1071
RsaI GTAC 4 cut(s) 101, 533, 941, 1361
RsaNI GTAC 4 cut(s) 100, 532, 940, 1360
RseI CAYNNNNRTG 2 cut(s) 1193, 1229
SacI GAGCTC 3 cut(s) 349, 843, 1288
SapI GCTCTTC 1 cut(s) 354
SaqAI TTAA 2 cut(s) 567, 1274
SatI GCNGC 9 cut(s) 177, 270, 273, 676, 762, 814, 885, 1410, 1576
Sau3AI GATC 7 cut(s) 70, 180, 219, 1013, 1164, 1263, 1543
Sau96I GGNCC 5 cut(s) 673, 1173, 1174, 1234, 1235
SchI GAGTC 7 cut(s) 417, 705, 710, 735, 737, 1314, 1329
SduI GDGCHC 6 cut(s) 349, 780, 843, 1177, 1238, 1288
SfaNI GCATC 1 cut(s) 930
SfcI CTRYAG 1 cut(s) 1252
SmiMI CAYNNNNRTG 2 cut(s) 1193, 1229
Sse9I AATT 3 cut(s) 237, 1404, 1589
SspMI CTAG 2 cut(s) 230, 572
SstI GAGCTC 3 cut(s) 349, 843, 1288
StyI CCWWGG 4 cut(s) 571, 720, 978, 1194
TaaI ACNGT 2 cut(s) 821, 1027
TaiI ACGT 8 cut(s) 216, 287, 304, 491, 795, 831, 1049, 1212
TaqI TCGA 5 cut(s) 69, 222, 702, 924, 1146
TaqII GACCGA 1 cut(s) 720
TasI AATT 3 cut(s) 237, 1404, 1589
TatI WGTACW 1 cut(s) 939
TauI GCSGC 8 cut(s) 179, 272, 275, 678, 764, 887, 1412, 1578
TfiI GAWTC 6 cut(s) 244, 519, 647, 768, 951, 969
Tru1I TTAA 2 cut(s) 567, 1274
Tru9I TTAA 2 cut(s) 567, 1274
TscAI CASTG 2 cut(s) 785, 1333
TseFI GTSAC 1 cut(s) 869
TseI GCWGC 1 cut(s) 813
Tsp45I GTSAC 1 cut(s) 869
TspDTI ATGAA 2 cut(s) 1021, 1040
TspGWI ACGGA 3 cut(s) 601, 857, 1006
TspRI CASTG 2 cut(s) 785, 1333
Tth111I GACNNNGTC 2 cut(s) 929, 1071
Van91I CCANNNNNTGG 1 cut(s) 1245
XagI CCTNNNNNAGG 1 cut(s) 1361
XapI RAATTY 1 cut(s) 237
XmaJI CCTAGG 1 cut(s) 571
XmiI GTMKAC 4 cut(s) 308, 444, 895, 1251
XspI CTAG 2 cut(s) 230, 572
ZraI GACGTC 4 cut(s) 285, 302, 793, 829
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.