Rmu_sc0000652.1_g000002

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000652.1
OG0000467
Physical Location & Seq
Forward (+)
6142 .. 7761
1620 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000652.1_g000002.1.cds

Sequence Viewer

Length: 1620 bp
ctgtttcacttacaaggaagcttcagatcggttgagcgaggaggaaggcgccatgagcaacgagacaaagcttcagttgacagagtcagcggcctcccagatcggtgcatttatgaggaggaagaaaacaagcaccatgagaagagaaacagtactaacttagctgacagaatcagtgatctcccagatgatatgttgcatctcatactctcgttcctacctttcaaatccgtcgggcaaaccagtgtcttatctcgaagatggagtcatgtatggtcttcctatcccatctttgacttctacgacatttttactggtaatgaagttcttcatcaccagacgagagcaaggatcataaacacagtattggctcgccaggacgaaaactataatataatgtgtccatgtctcaaaattcccttcccaagcggcagtttaggtcactttcgaagagttggggaagatccaaacgattcttgttttgctagggttgagcaactagtactggacatctccttgaatagtgaaaacacatatgttttgcctcaatgccaacttaagtgccagtcactaaggagtagtagctgtgggaattcaaaggcatggctagggtttccctcttcttatgttgtttggtcttgcctcctttcacttcagtctttgtcgctaagtcatatggatttcttggatagaagtttagatgtggatttattttctggttcttcgttcccttgtctcgaaaatttggagataaagatgtgcagaggaatggatgatctcaaaatttgctgtccgaacctaaaagttatacgagttttcgcaatgggtttaaagagtatagacatttccggaacgagactagaggatgtaagagtctcgttttgttttctaaattgcataaatggaagtggggttgacattttcgcccccaatctaaaatcctttgcttgggtgggtaacggcattactgacaagagttcgatccagagctttcctgtgctcaaaaggtctgaatttctttggccccaccttacaaggaataagatttctaatgacagtgttatcgatcttttttcgtcttcatcccaagttgaagaacttgcaatagcttttgacttcctccagattctatcagaaatttattttgaattaggtggtctgcccttctcattcataaaacttaagaccttggatatttatctcgataaaagatatttcccggcccgaggtatagcatgcttattcaagagttctatagtccacagactgaggattcatctttttatggactcttatgaagaaaattatgatgagtggaacgacttgaattacgccaactgtactgaaaagcaatactgcgacactcgagctcaatatttgagcccctttcttagtcacctaaaggtggtcgacattaaccttggcaccatgatccctgagaatgcagtaacttttgcaaaatttttccttaaatatgttagaggcttgcaaaaggtgaatcttagatattgtaggggaaaatgtaatctacctcccaatttgctgaaagatatcattgctttaatggagggtctcccccgggcatctgcagatgttgaaatctcaatttcttgctattga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

539

Amino Acids

61.65

Weight (kDa)

6.74

Isoelectric Point (pI)

48.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000467)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g02550 FvH4_6g26921 FvH4_6g45630
malus_domestica MD01G1113200.v1.1 MD09G1101600.v1.1 MD17G1084600.v1.1
prunus_persica Prupe.3G224400_v2.0.a1 Prupe.3G224500_v2.0.a1 Prupe.3G224600_v2.0.a1
pyrus_communis pycom02g19930 pycom09g00760 pycom09g00770 pycom17g08170
rosa_chinensis RchiOBHm_Chr1g0350511 RchiOBHm_Chr2g0086171 RchiOBHm_Chr2g0117831 RchiOBHm_Chr3g0450391 RchiOBHm_Chr4g0409631 RchiOBHm_Chr5g0039731
rosa_laevigata RLG00000008538 RLG00000018375 RLG00000021415 RLG00000028481 RLG00000033926 RLG00000033937 RLG00000033938 RLG00000033939 RLG00000033941
rosa_multiflora Rmu_sc0000103.1_g000011 Rmu_sc0000330.1_g000009 Rmu_sc0000652.1_g000002 Rmu_sc0001507.1_g000017 Rmu_sc0004020.1_g000010 Rmu_sc0026676.1_g000001 Rmu_ssc0000083.1_g000022 Rmu_ssc0000400.1_g000021
rosa_roxburghii Rroxscaffold_1G00040760 Rroxscaffold_1G00041490 Rroxscaffold_1G00041500 Rroxscaffold_1G00041630 Rroxscaffold_2G00087990 Rroxscaffold_2G00126200 Rroxscaffold_4G00304800 Rroxscaffold_5G00354160 Rroxscaffold_5G00354170
rosa_rugosa Rorug01G0211500 Rorug02G0214300 Rorug02G0496800 Rorug02G0627700 Rorug04G0095600 Rorug05G0181700
rosa_samantha Rh1AG226300 Rh1BG194700 Rh1CG211100 Rh1DG222900 Rh2AG270500 Rh2AG270600 Rh2AG562900 Rh2AG563000 Rh2BG281900 Rh2BG282000 Rh2BG575700 Rh2CG269300 Rh2CG269400 Rh2DG278300 Rh2DG296200 Rh2DG585900 Rh3AG028000 Rh3AG028100 Rh3BG028500 Rh3BG028600 Rh3CG027300 Rh3CG027400 Rh3DG028400 Rh3DG028500 Rh4BG156800 Rh4CG167300 Rh4CG167400 Rh4DG151100 Rh5AG268000 Rh5BG272400 Rh5BG272500 Rh5CG304000 Rh5CG305000 Rh5CG305100 Rh5DG280500
rosa_wichuraiana Rw1G019530 Rw2G021370 Rw4G012860 Rw4G012970 Rw5G025070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 48, 1424
AccI GTMKAC 1 cut(s) 1410
AccIII TCCGGA 1 cut(s) 848
AciI CCGC 2 cut(s) 90, 429
AclWI GGATC 4 cut(s) 359, 458, 976, 1426
AcsI RAATTY 7 cut(s) 414, 592, 742, 783, 1013, 1137, 1460
AcuI CTGAAG 3 cut(s) 7, 57, 638
AcyI GRCGYC 1 cut(s) 49
AfaI GTAC 3 cut(s) 154, 504, 1342
AfiI CCNNNNNNNGG 3 cut(s) 948, 1226, 1405
AflII CTTAAG 2 cut(s) 557, 1181
AgsI TTSAA 8 cut(s) 226, 520, 597, 1094, 1148, 1246, 1327, 1598
AhlI ACTAGT 1 cut(s) 499
AjnI CCWGG 1 cut(s) 375
AluBI AGCT 7 cut(s) 21, 71, 164, 585, 990, 1109, 1370
AluI AGCT 7 cut(s) 21, 71, 164, 585, 990, 1109, 1370
Alw21I GWGCWC 2 cut(s) 1002, 1372
Alw26I GTCTC 6 cut(s) 57, 413, 740, 850, 880, 1577
AlwI GGATC 4 cut(s) 359, 458, 976, 1426
Ama87I CYCGRG 3 cut(s) 1224, 1365, 1578
Aor13HI TCCGGA 1 cut(s) 848
AoxI GGCC 3 cut(s) 91, 1022, 1221
ApoI RAATTY 7 cut(s) 414, 592, 742, 783, 1013, 1137, 1460
ArsI GACNNNNNNTTYG 2 cut(s) 250, 282
Asp700I GAANNNNTTC 1 cut(s) 327
AspLEI GCGC 1 cut(s) 51
AspS9I GGNCC 2 cut(s) 1023, 1222
AsuC2I CCSGG 3 cut(s) 1220, 1579, 1580
AsuHPI GGTGA 3 cut(s) 326, 1388, 1507
AsuII TTCGAA 1 cut(s) 448
AvaI CYCGRG 3 cut(s) 1224, 1365, 1578
BanI GGYRCC 2 cut(s) 48, 1424
BanII GRGCYC 2 cut(s) 1372, 1385
BbsI GAAGAC 2 cut(s) 270, 1071
Bbv12I GWGCWC 2 cut(s) 1002, 1372
BccI CCATC 2 cut(s) 255, 296
BceAI ACGGC 1 cut(s) 976
BciT130I CCWGG 1 cut(s) 377
BcnI CCSGG 3 cut(s) 1220, 1579, 1580
BcoDI GTCTC 6 cut(s) 57, 413, 740, 850, 880, 1577
BcuI ACTAGT 1 cut(s) 499
BfaI CTAG 4 cut(s) 486, 500, 608, 860
BfmI CTRYAG 2 cut(s) 1254, 1587
BfoI RGCGCY 1 cut(s) 52
BfrI CTTAAG 2 cut(s) 557, 1181
BisI GCNGC 2 cut(s) 91, 430
BlsI GCNGC 2 cut(s) 92, 431
BmcAI AGTACT 2 cut(s) 154, 504
Bme1390I CCNGG 4 cut(s) 377, 1220, 1579, 1580
BmeT110I CYCGRG 3 cut(s) 1224, 1365, 1578
BmgT120I GGNCC 2 cut(s) 1023, 1222
BmiI GGNNCC 3 cut(s) 50, 1025, 1426
BmrFI CCNGG 4 cut(s) 377, 1220, 1579, 1580
BmsI GCATC 2 cut(s) 208, 1592
BpiI GAAGAC 2 cut(s) 270, 1071
BpmI CTGGAG 1 cut(s) 1106
Bpu14I TTCGAA 1 cut(s) 448
BpuMI CCSGG 3 cut(s) 1220, 1579, 1580
Bsa29I ATCGAT 1 cut(s) 1065
BsaBI GATNNNNATC 1 cut(s) 1197
BsaHI GRCGYC 1 cut(s) 49
BsaI GGTCTC 1 cut(s) 1577
BsaJI CCNNGG 5 cut(s) 1188, 1225, 1420, 1577, 1578
BsaWI WCCGGW 1 cut(s) 848
Bsc4I CCNNNNNNNGG 3 cut(s) 948, 1226, 1405
Bse1I ACTGG 4 cut(s) 243, 319, 510, 565
Bse3DI GCAATG 2 cut(s) 828, 1554
Bse8I GATNNNNATC 1 cut(s) 1197
BseAI TCCGGA 1 cut(s) 848
BseBI CCWGG 1 cut(s) 377
BseCI ATCGAT 1 cut(s) 1065
BseDI CCNNGG 5 cut(s) 1188, 1225, 1420, 1577, 1578
BseGI GGATG 3 cut(s) 778, 871, 1082
BseJI GATNNNNATC 1 cut(s) 1197
BseLI CCNNNNNNNGG 3 cut(s) 948, 1226, 1405
BseMI GCAATG 2 cut(s) 828, 1554
BseMII CTCAG 2 cut(s) 1259, 1428
BseNI ACTGG 4 cut(s) 243, 319, 510, 565
BseRI GAGGAG 2 cut(s) 54, 131
BsgI GTGCAG 1 cut(s) 781
BshFI GGCC 3 cut(s) 93, 1024, 1223
BshNI GGYRCC 2 cut(s) 48, 1424
BshVI ATCGAT 1 cut(s) 1065
BsiHKAI GWGCWC 2 cut(s) 1002, 1372
BsiHKCI CYCGRG 3 cut(s) 1224, 1365, 1578
BsiSI CCGG 3 cut(s) 849, 1220, 1579
BslI CCNNNNNNNGG 3 cut(s) 948, 1226, 1405
BsmAI GTCTC 6 cut(s) 57, 413, 740, 850, 880, 1577
BsmI GAATGC 1 cut(s) 1447
BsnI GGCC 3 cut(s) 93, 1024, 1223
Bso31I GGTCTC 1 cut(s) 1577
BsoBI CYCGRG 3 cut(s) 1224, 1365, 1578
Bsp119I TTCGAA 1 cut(s) 448
Bsp1286I GDGCHC 3 cut(s) 1002, 1372, 1385
Bsp13I TCCGGA 1 cut(s) 848
Bsp143I GATC 9 cut(s) 26, 100, 178, 351, 463, 775, 981, 1066, 1431
BspACI CCGC 2 cut(s) 90, 429
BspANI GGCC 3 cut(s) 93, 1024, 1223
BspCNI CTCAG 2 cut(s) 1260, 1429
BspDI ATCGAT 1 cut(s) 1065
BspEI TCCGGA 1 cut(s) 848
BspLI GGNNCC 3 cut(s) 50, 1025, 1426
BspMAI CTGCAG 1 cut(s) 1591
BspPI GGATC 4 cut(s) 359, 458, 976, 1426
BspT104I TTCGAA 1 cut(s) 448
BspT107I GGYRCC 2 cut(s) 48, 1424
BspTI CTTAAG 2 cut(s) 557, 1181
BspTNI GGTCTC 1 cut(s) 1577
BsrDI GCAATG 2 cut(s) 828, 1554
BsrI ACTGG 4 cut(s) 243, 319, 510, 565
BssECI CCNNGG 5 cut(s) 1188, 1225, 1420, 1577, 1578
BssMI GATC 9 cut(s) 26, 100, 178, 351, 463, 775, 981, 1066, 1431
BssNI GRCGYC 1 cut(s) 49
BssT1I CCWWGG 2 cut(s) 1188, 1420
Bst2UI CCWGG 1 cut(s) 377
Bst4CI ACNGT 4 cut(s) 152, 364, 1058, 1340
Bst6I CTCTTC 3 cut(s) 137, 445, 625
BstACI GRCGYC 1 cut(s) 49
BstAFI CTTAAG 2 cut(s) 557, 1181
BstBI TTCGAA 1 cut(s) 448
BstC8I GCNNGC 3 cut(s) 373, 1237, 1487
BstDEI CTNAG 7 cut(s) 160, 572, 668, 1268, 1391, 1437, 1502
BstF5I GGATG 3 cut(s) 778, 871, 1082
BstH2I RGCGCY 1 cut(s) 52
BstHHI GCGC 1 cut(s) 51
BstKTI GATC 9 cut(s) 29, 103, 181, 354, 466, 778, 984, 1069, 1434
BstMAI GTCTC 6 cut(s) 57, 413, 740, 850, 880, 1577
BstMBI GATC 9 cut(s) 26, 100, 178, 351, 463, 775, 981, 1066, 1431
BstMWI GCNNNNNNNGC 1 cut(s) 55
BstNI CCWGG 1 cut(s) 377
BstNSI RCATGY 1 cut(s) 1239
BstSCI CCNGG 4 cut(s) 375, 1218, 1577, 1578
BstSFI CTRYAG 2 cut(s) 1254, 1587
BstV2I GAAGAC 2 cut(s) 270, 1071
BstX2I RGATCY 1 cut(s) 463
BstYI RGATCY 1 cut(s) 463
Bsu15I ATCGAT 1 cut(s) 1065
BsuRI GGCC 3 cut(s) 93, 1024, 1223
BsuTUI ATCGAT 1 cut(s) 1065
BtsCI GGATG 3 cut(s) 778, 871, 1082
BtsIMutI CAGTG 3 cut(s) 181, 250, 1063
Cac8I GCNNGC 3 cut(s) 373, 1237, 1487
CfoI GCGC 1 cut(s) 51
Cfr13I GGNCC 2 cut(s) 1023, 1222
Cfr9I CCCGGG 1 cut(s) 1578
ClaI ATCGAT 1 cut(s) 1065
Csp6I GTAC 3 cut(s) 153, 503, 1341
CviAII CATG 7 cut(s) 53, 137, 269, 405, 603, 1236, 1429
CviQI GTAC 3 cut(s) 153, 503, 1341
DdeI CTNAG 7 cut(s) 160, 572, 668, 1268, 1391, 1437, 1502
DinI GGCGCC 1 cut(s) 50
DpnI GATC 9 cut(s) 28, 102, 180, 353, 465, 777, 983, 1068, 1433
DpnII GATC 9 cut(s) 26, 100, 178, 351, 463, 775, 981, 1066, 1431
DraI TTTAAA 1 cut(s) 831
Eam1104I CTCTTC 3 cut(s) 137, 445, 625
EarI CTCTTC 3 cut(s) 137, 445, 625
Ecl136II GAGCTC 1 cut(s) 1370
Eco130I CCWWGG 2 cut(s) 1188, 1420
Eco24I GRGCYC 2 cut(s) 1372, 1385
Eco31I GGTCTC 1 cut(s) 1577
Eco32I GATATC 1 cut(s) 1552
Eco53kI GAGCTC 1 cut(s) 1370
Eco57I CTGAAG 3 cut(s) 7, 57, 638
Eco88I CYCGRG 3 cut(s) 1224, 1365, 1578
EcoICRI GAGCTC 1 cut(s) 1370
EcoRI GAATTC 1 cut(s) 592
EcoRII CCWGG 1 cut(s) 375
EcoRV GATATC 1 cut(s) 1552
EcoT14I CCWWGG 2 cut(s) 1188, 1420
EcoT38I GRGCYC 2 cut(s) 1372, 1385
EgeI GGCGCC 1 cut(s) 50
EheI GGCGCC 1 cut(s) 50
ErhI CCWWGG 2 cut(s) 1188, 1420
FaeI CATG 7 cut(s) 56, 140, 272, 408, 606, 1239, 1432
FatI CATG 7 cut(s) 52, 136, 268, 404, 602, 1235, 1428
FauNDI CATATG 2 cut(s) 535, 675
FblI GTMKAC 1 cut(s) 1410
Fnu4HI GCNGC 2 cut(s) 91, 430
FokI GGATG 3 cut(s) 785, 878, 1069
FriOI GRGCYC 2 cut(s) 1372, 1385
Fsp4HI GCNGC 2 cut(s) 91, 430
FspBI CTAG 4 cut(s) 486, 500, 608, 860
GlaI GCGC 1 cut(s) 50
GluI GCNGC 2 cut(s) 91, 430
GsuI CTGGAG 1 cut(s) 1106
HaeII RGCGCY 1 cut(s) 52
HaeIII GGCC 3 cut(s) 93, 1024, 1223
HapII CCGG 3 cut(s) 849, 1220, 1579
HhaI GCGC 1 cut(s) 51
Hin1I GRCGYC 1 cut(s) 49
Hin1II CATG 7 cut(s) 56, 140, 272, 408, 606, 1239, 1432
Hin6I GCGC 1 cut(s) 49
HinP1I GCGC 1 cut(s) 49
HincII GTYRAC 3 cut(s) 79, 916, 1411
HindII GTYRAC 3 cut(s) 79, 916, 1411
HindIII AAGCTT 2 cut(s) 19, 69
HinfI GANTC 9 cut(s) 84, 171, 265, 473, 873, 1126, 1273, 1289, 1498
HpaII CCGG 3 cut(s) 849, 1220, 1579
HphI GGTGA 3 cut(s) 326, 1388, 1507
Hpy166II GTNNAC 4 cut(s) 79, 916, 1261, 1411
Hpy188I TCNGA 4 cut(s) 26, 795, 1012, 1135
Hpy188III TCNNGA 7 cut(s) 255, 737, 849, 985, 1123, 1202, 1246
Hpy8I GTNNAC 4 cut(s) 79, 916, 1261, 1411
Hpy99I CGWCG 1 cut(s) 236
HpyAV CCTTC 3 cut(s) 39, 430, 1174
HpyCH4III ACNGT 4 cut(s) 152, 364, 1058, 1340
HpyCH4V TGCA 9 cut(s) 108, 199, 762, 897, 1103, 1445, 1457, 1489, 1589
HpyF10VI GCNNNNNNNGC 1 cut(s) 55
HpyF3I CTNAG 7 cut(s) 160, 572, 668, 1268, 1391, 1437, 1502
Hsp92I GRCGYC 1 cut(s) 49
Hsp92II CATG 7 cut(s) 56, 140, 272, 408, 606, 1239, 1432
HspAI GCGC 1 cut(s) 49
KasI GGCGCC 1 cut(s) 48
Kpn2I TCCGGA 1 cut(s) 848
Kzo9I GATC 9 cut(s) 26, 100, 178, 351, 463, 775, 981, 1066, 1431
LweI GCATC 2 cut(s) 208, 1592
MaeI CTAG 4 cut(s) 486, 500, 608, 860
MaeIII GTNAC 5 cut(s) 440, 567, 956, 1394, 1447
MalI GATC 9 cut(s) 28, 102, 180, 353, 465, 777, 983, 1068, 1433
MboI GATC 9 cut(s) 26, 100, 178, 351, 463, 775, 981, 1066, 1431
MflI RGATCY 1 cut(s) 463
MhlI GDGCHC 3 cut(s) 1002, 1372, 1385
Mly113I GGCGCC 1 cut(s) 49
MlyI GAGTC 4 cut(s) 93, 274, 882, 1283
MroI TCCGGA 1 cut(s) 848
MroXI GAANNNNTTC 1 cut(s) 327
MseI TTAA 6 cut(s) 558, 830, 1182, 1416, 1470, 1562
MspA1I CMGCKG 1 cut(s) 90
MspCI CTTAAG 2 cut(s) 557, 1181
MspI CCGG 3 cut(s) 849, 1220, 1579
MspR9I CCNGG 4 cut(s) 377, 1220, 1579, 1580
Mva1269I GAATGC 1 cut(s) 1447
MvaI CCWGG 1 cut(s) 377
MwoI GCNNNNNNNGC 1 cut(s) 55
NarI GGCGCC 1 cut(s) 49
NciI CCSGG 3 cut(s) 1220, 1579, 1580
NdeI CATATG 2 cut(s) 535, 675
NdeII GATC 9 cut(s) 26, 100, 178, 351, 463, 775, 981, 1066, 1431
NlaIII CATG 7 cut(s) 56, 140, 272, 408, 606, 1239, 1432
NlaIV GGNNCC 3 cut(s) 50, 1025, 1426
NmuCI GTSAC 3 cut(s) 440, 567, 1394
NspI RCATGY 1 cut(s) 1239
NspV TTCGAA 1 cut(s) 448
PaeI GCATGC 1 cut(s) 1239
PaeR7I CTCGAG 1 cut(s) 1365
PctI GAATGC 1 cut(s) 1447
PdmI GAANNNNTTC 1 cut(s) 327
PfeI GAWTC 5 cut(s) 171, 473, 1126, 1273, 1498
PflFI GACNNNGTC 1 cut(s) 83
PkrI GCNGC 2 cut(s) 92, 431
PleI GAGTC 4 cut(s) 92, 273, 881, 1283
PluTI GGCGCC 1 cut(s) 52
PpsI GAGTC 4 cut(s) 92, 273, 881, 1283
Psp124BI GAGCTC 1 cut(s) 1372
Psp6I CCWGG 1 cut(s) 375
PspGI CCWGG 1 cut(s) 375
PspN4I GGNNCC 3 cut(s) 50, 1025, 1426
PspPI GGNCC 2 cut(s) 1023, 1222
PspXI VCTCGAGB 1 cut(s) 1365
PstI CTGCAG 1 cut(s) 1591
PsuI RGATCY 1 cut(s) 463
PsyI GACNNNGTC 1 cut(s) 83
RsaI GTAC 3 cut(s) 154, 504, 1342
RsaNI GTAC 3 cut(s) 153, 503, 1341
SacI GAGCTC 1 cut(s) 1372
SalI GTCGAC 1 cut(s) 1409
SaqAI TTAA 6 cut(s) 558, 830, 1182, 1416, 1470, 1562
SatI GCNGC 2 cut(s) 91, 430
Sau3AI GATC 9 cut(s) 26, 100, 178, 351, 463, 775, 981, 1066, 1431
Sau96I GGNCC 2 cut(s) 1023, 1222
ScaI AGTACT 2 cut(s) 154, 504
SchI GAGTC 4 cut(s) 93, 274, 882, 1283
ScrFI CCNGG 4 cut(s) 377, 1220, 1579, 1580
SduI GDGCHC 3 cut(s) 1002, 1372, 1385
SfaNI GCATC 2 cut(s) 208, 1592
SfcI CTRYAG 2 cut(s) 1254, 1587
SfoI GGCGCC 1 cut(s) 50
Sfr274I CTCGAG 1 cut(s) 1365
SfuI TTCGAA 1 cut(s) 448
SlaI CTCGAG 1 cut(s) 1365
SmaI CCCGGG 1 cut(s) 1580
SmlI CTYRAG 3 cut(s) 557, 1181, 1365
SmoI CTYRAG 3 cut(s) 557, 1181, 1365
SpeI ACTAGT 1 cut(s) 499
SphI GCATGC 1 cut(s) 1239
SsiI CCGC 2 cut(s) 90, 429
SspDI GGCGCC 1 cut(s) 48
SspI AATATT 1 cut(s) 1376
SspMI CTAG 4 cut(s) 486, 500, 608, 860
SstI GAGCTC 1 cut(s) 1372
StyD4I CCNGG 4 cut(s) 375, 1218, 1577, 1578
StyI CCWWGG 2 cut(s) 1188, 1420
TaaI ACNGT 4 cut(s) 152, 364, 1058, 1340
TaqI TCGA 8 cut(s) 256, 448, 738, 980, 1065, 1203, 1366, 1410
TatI WGTACW 3 cut(s) 152, 502, 1340
TauI GCSGC 2 cut(s) 93, 432
TfiI GAWTC 5 cut(s) 171, 473, 1126, 1273, 1498
Tru1I TTAA 6 cut(s) 558, 830, 1182, 1416, 1470, 1562
Tru9I TTAA 6 cut(s) 558, 830, 1182, 1416, 1470, 1562
TscAI CASTG 3 cut(s) 181, 250, 1063
TseFI GTSAC 3 cut(s) 440, 567, 1394
Tsp45I GTSAC 3 cut(s) 440, 567, 1394
TspDTI ATGAA 6 cut(s) 320, 336, 1071, 1162, 1265, 1311
TspGWI ACGGA 1 cut(s) 220
TspMI CCCGGG 1 cut(s) 1578
TspRI CASTG 3 cut(s) 181, 250, 1063
Tth111I GACNNNGTC 1 cut(s) 83
Vha464I CTTAAG 2 cut(s) 557, 1181
XapI RAATTY 7 cut(s) 414, 592, 742, 783, 1013, 1137, 1460
XceI RCATGY 1 cut(s) 1239
XhoI CTCGAG 1 cut(s) 1365
XmaI CCCGGG 1 cut(s) 1578
XmiI GTMKAC 1 cut(s) 1410
XmnI GAANNNNTTC 1 cut(s) 327
XspI CTAG 4 cut(s) 486, 500, 608, 860
ZrmI AGTACT 2 cut(s) 154, 504
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.