Rroxscaffold_1G00040760

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000467
Physical Location & Seq
Reverse (-)
58529541 .. 58531210
1670 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00040760.1

Sequence Viewer

Length: 1581 bp
ATGGGAAACTGTTTCACTCATAAAGAAAAAGCTTCAGATCGCTGGATCCGGGAGGAGGAGGAAGAAAACAAACACCATGAGCAGCGAAACAGAATCAGCGATCCCCCAGATCAGTGCACTGATGCTCCGGCTGACAGAATCAGCGGTGATCTTTCAGATCGGTGGAGTGAGGAGGAAGAAAACAAGCATGAGAAGAGAAACAGTACTGGTTCATCTGACAGAATCAGTGATCTCCCAGATGATATGTTGCATCTCATATTCACATTCTTGCCTTTCAAATACGTTGGGCAAACTAGTGTCTTATCTCGAAGATGGAGTCATGTATGGTCTTCCTATCCCATCTTTGACTTCTACGAAATTTTTACTGGTAATGAAGCTGAACATCACCAGACAAGAGCAAGCATCATCAACACAGTATTGGCTCGCGATCGCCACAACGAAAACTATAACATGATGGTTGAGGAACTTGTACTCGATATCTCGTTGAGTAGTGCAAATACATCTAATTTGCCTCAATGTCAACTTAAGTGCCACTCATTAAGGAGTAGTAGCTGTGGGAGTTCAAAGGCATGGCTAGGGTTTCCCTCTACTTATGTTGTCTGGTCTTATCTCCTTTCACTCCAAGATTTGTTTCTAGCTAATGTGGATTTCTCAGATACTGCTTTGGGTGTGGATTTATTTTCTGGTTCTTCATTCCCTTTTCTCAAAAAATTGAATATAGAGTGGTGTAGAGGAATGACTGCTCTCAAAATTTGCTGTGCGAACCTAAAAGATGTATGCATTTTAGGAATGGATCTATATAGCATGGACATCTCTGGAATGAGACTGGAGGAGTTGTTTTGTGCTGAAAATTGCTTCGATGGTTGGGTCAACATTTTTGCCCCGAATCTACAATACTTGTACTGGGGCAATCCAATTACTGAGAAGTGTTCCATCCAGAGCTTTCCTACGCCCAAAACATCTTGCATTGGTTGTTCGTTTCTGATCGGCATAACAAAGACAAATATTTTTCATAACAGTGTTATCAATCTTCTTTCCCATTCATGCCAAGCTGAAATCCTTAAGATATTCGATGACTACCTCGAGATTCTATCAGACATTTATGTTGAATTTGGTGGTGTACCTTTCTCATTTGGCAAACTTGAAACCTTGAAAATTGGGTACACAATGAAGCAGAGATATATCCCGGGTATAGCATGCCTGTTGAAGAGCTCTCCCGTAGTCCACACCCTCGACATTGAGTTTCTCTCTTTCGAAGAAAATGATAAGTGGAATAACATTATGTTGGATAATGCCAATTGCACTCAAGAGCAATACTGGGAAACTCAGGCTCAACATTTGATCCCCTTTCTTAGTCACCTAAAGGTGGTCGACATCGGCCTTGGTAACTTGATCTCTGAGAATGCAATCACTTTTGCGAAGTTTTTGCTTAAATATGGAAGAGGCCTGCAAAAAATGACTCTTAGGTTTTGGAGGAGCGGAAGTTCTCTTCCTCCGAATTCGCTAAATGATACCATTGATTTATTAAAGGGTTTCCCCAGGGCATCTGCAGGTCTTGAGTTCTCAAGGTACTGCTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

526

Amino Acids

60.11

Weight (kDa)

5.38

Isoelectric Point (pI)

47.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 75 - 114 5.3e-09 F-box domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000467)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g02550 FvH4_6g26921 FvH4_6g45630
malus_domestica MD01G1113200.v1.1 MD09G1101600.v1.1 MD17G1084600.v1.1
prunus_persica Prupe.3G224400_v2.0.a1 Prupe.3G224500_v2.0.a1 Prupe.3G224600_v2.0.a1
pyrus_communis pycom02g19930 pycom09g00760 pycom09g00770 pycom17g08170
rosa_chinensis RchiOBHm_Chr1g0350511 RchiOBHm_Chr2g0086171 RchiOBHm_Chr2g0117831 RchiOBHm_Chr3g0450391 RchiOBHm_Chr4g0409631 RchiOBHm_Chr5g0039731
rosa_laevigata RLG00000008538 RLG00000018375 RLG00000021415 RLG00000028481 RLG00000033926 RLG00000033937 RLG00000033938 RLG00000033939 RLG00000033941
rosa_multiflora Rmu_sc0000103.1_g000011 Rmu_sc0000330.1_g000009 Rmu_sc0000652.1_g000002 Rmu_sc0001507.1_g000017 Rmu_sc0004020.1_g000010 Rmu_sc0026676.1_g000001 Rmu_ssc0000083.1_g000022 Rmu_ssc0000400.1_g000021
rosa_roxburghii Rroxscaffold_1G00040760 Rroxscaffold_1G00041490 Rroxscaffold_1G00041500 Rroxscaffold_1G00041630 Rroxscaffold_2G00087990 Rroxscaffold_2G00126200 Rroxscaffold_4G00304800 Rroxscaffold_5G00354160 Rroxscaffold_5G00354170
rosa_rugosa Rorug01G0211500 Rorug02G0214300 Rorug02G0496800 Rorug02G0627700 Rorug04G0095600 Rorug05G0181700
rosa_samantha Rh1AG226300 Rh1BG194700 Rh1CG211100 Rh1DG222900 Rh2AG270500 Rh2AG270600 Rh2AG562900 Rh2AG563000 Rh2BG281900 Rh2BG282000 Rh2BG575700 Rh2CG269300 Rh2CG269400 Rh2DG278300 Rh2DG296200 Rh2DG585900 Rh3AG028000 Rh3AG028100 Rh3BG028500 Rh3BG028600 Rh3CG027300 Rh3CG027400 Rh3DG028400 Rh3DG028500 Rh4BG156800 Rh4CG167300 Rh4CG167400 Rh4DG151100 Rh5AG268000 Rh5BG272400 Rh5BG272500 Rh5CG304000 Rh5CG305000 Rh5CG305100 Rh5DG280500
rosa_wichuraiana Rw1G019530 Rw2G021370 Rw4G012860 Rw4G012970 Rw5G025070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1541
AccBSI CCGCTC 1 cut(s) 1479
AccI GTMKAC 1 cut(s) 1371
AccII CGCG 1 cut(s) 426
AciI CCGC 2 cut(s) 144, 1479
AclWI GGATC 5 cut(s) 40, 53, 95, 801, 1336
AcsI RAATTY 4 cut(s) 357, 750, 1109, 1498
AcuI CTGAAG 1 cut(s) 18
AfaI GTAC 6 cut(s) 205, 471, 902, 1122, 1163, 1571
AfiI CCNNNNNNNGG 2 cut(s) 55, 1366
AflII CTTAAG 2 cut(s) 524, 1061
AgsI TTSAA 7 cut(s) 277, 564, 715, 1109, 1145, 1153, 1207
AhlI ACTAGT 1 cut(s) 293
AjnI CCWGG 1 cut(s) 1538
AjuI GAANNNNNNNTTGG 2 cut(s) 615, 647
AloI GAACNNNNNNTCC 2 cut(s) 1468, 1500
AluBI AGCT 7 cut(s) 32, 377, 552, 638, 942, 1052, 1212
AluI AGCT 7 cut(s) 32, 377, 552, 638, 942, 1052, 1212
Alw21I GWGCWC 2 cut(s) 119, 1214
Alw26I GTCTC 1 cut(s) 817
Alw44I GTGCAC 1 cut(s) 115
AlwI GGATC 5 cut(s) 40, 53, 95, 801, 1336
AlwNI CAGNNNCTG 1 cut(s) 659
Ama87I CYCGRG 2 cut(s) 1082, 1186
AoxI GGCC 2 cut(s) 1378, 1444
ApaLI GTGCAC 1 cut(s) 115
ApeKI GCWGC 1 cut(s) 82
ApoI RAATTY 4 cut(s) 357, 750, 1109, 1498
ArsI GACNNNNNNTTYG 2 cut(s) 301, 333
AsiSI GCGATCGC 1 cut(s) 430
AsuC2I CCSGG 3 cut(s) 50, 1187, 1188
AsuHPI GGTGA 3 cut(s) 158, 377, 1349
AsuII TTCGAA 1 cut(s) 1254
AvaI CYCGRG 2 cut(s) 1082, 1186
BaeGI GKGCMC 1 cut(s) 119
BamHI GGATCC 1 cut(s) 45
BanII GRGCYC 1 cut(s) 1214
BbsI GAAGAC 1 cut(s) 321
Bbv12I GWGCWC 2 cut(s) 119, 1214
BbvI GCAGC 1 cut(s) 94
BccI CCATC 5 cut(s) 306, 347, 448, 854, 941
BcgI CGANNNNNNTGC 2 cut(s) 1408, 1442
BciT130I CCWGG 1 cut(s) 1540
BcnI CCSGG 3 cut(s) 50, 1187, 1188
BcoDI GTCTC 1 cut(s) 817
BcuI ACTAGT 1 cut(s) 293
BfaI CTAG 3 cut(s) 294, 575, 635
BfmI CTRYAG 1 cut(s) 1548
BfrI CTTAAG 2 cut(s) 524, 1061
BfuAI ACCTGC 1 cut(s) 1541
BisI GCNGC 1 cut(s) 83
BlsI GCNGC 1 cut(s) 84
BmcAI AGTACT 1 cut(s) 205
Bme1390I CCNGG 4 cut(s) 50, 1187, 1188, 1540
BmeT110I CYCGRG 2 cut(s) 1082, 1186
BmiI GGNNCC 1 cut(s) 47
BmrFI CCNGG 4 cut(s) 50, 1187, 1188, 1540
BmrI ACTGGG 2 cut(s) 913, 1327
BmsI GCATC 4 cut(s) 112, 259, 411, 1553
BmuI ACTGGG 2 cut(s) 913, 1327
BpiI GAAGAC 1 cut(s) 321
BplI GAGNNNNNCTC 2 cut(s) 1232, 1264
BpmI CTGGAG 1 cut(s) 848
Bpu14I TTCGAA 1 cut(s) 1254
BpuEI CTTGAG 3 cut(s) 1290, 1549, 1577
BpuMI CCSGG 3 cut(s) 50, 1187, 1188
BsaJI CCNNGG 4 cut(s) 1186, 1381, 1538, 1539
BsaXI ACNNNNNCTCC 6 cut(s) 109, 139, 821, 851, 1468, 1498
Bsc4I CCNNNNNNNGG 2 cut(s) 55, 1366
Bse1I ACTGG 5 cut(s) 211, 370, 831, 908, 1322
BseBI CCWGG 1 cut(s) 1540
BseDI CCNNGG 4 cut(s) 1186, 1381, 1538, 1539
BseGI GGATG 1 cut(s) 933
BseLI CCNNNNNNNGG 2 cut(s) 55, 1366
BseMII CTCAG 4 cut(s) 666, 912, 1340, 1389
BseNI ACTGG 5 cut(s) 211, 370, 831, 908, 1322
BseRI GAGGAG 5 cut(s) 68, 71, 185, 845, 1489
BseSI GKGCMC 1 cut(s) 119
BseXI GCAGC 1 cut(s) 94
Bsh1236I CGCG 1 cut(s) 426
Bsh1285I CGRYCG 1 cut(s) 430
BshFI GGCC 2 cut(s) 1380, 1446
BsiEI CGRYCG 1 cut(s) 430
BsiHKAI GWGCWC 2 cut(s) 119, 1214
BsiHKCI CYCGRG 2 cut(s) 1082, 1186
BsiSI CCGG 3 cut(s) 49, 128, 1187
BslI CCNNNNNNNGG 2 cut(s) 55, 1366
BsmAI GTCTC 1 cut(s) 817
BsmI GAATGC 1 cut(s) 1408
BsnI GGCC 2 cut(s) 1380, 1446
BsoBI CYCGRG 2 cut(s) 1082, 1186
Bsp119I TTCGAA 1 cut(s) 1254
Bsp1286I GDGCHC 2 cut(s) 119, 1214
Bsp68I TCGCGA 1 cut(s) 426
BspACI CCGC 2 cut(s) 144, 1479
BspANI GGCC 2 cut(s) 1380, 1446
BspCNI CTCAG 4 cut(s) 665, 913, 1339, 1390
BspFNI CGCG 1 cut(s) 426
BspLI GGNNCC 1 cut(s) 47
BspMAI CTGCAG 1 cut(s) 1552
BspMI ACCTGC 1 cut(s) 1541
BspPI GGATC 5 cut(s) 40, 53, 95, 801, 1336
BspQI GCTCTTC 1 cut(s) 1202
BspT104I TTCGAA 1 cut(s) 1254
BspTI CTTAAG 2 cut(s) 524, 1061
BsrBI CCGCTC 1 cut(s) 1479
BsrI ACTGG 5 cut(s) 211, 370, 831, 908, 1322
BssECI CCNNGG 4 cut(s) 1186, 1381, 1538, 1539
BssT1I CCWWGG 1 cut(s) 1381
Bst2UI CCWGG 1 cut(s) 1540
Bst4CI ACNGT 4 cut(s) 11, 203, 415, 1019
Bst6I CTCTTC 4 cut(s) 188, 1202, 1435, 1494
BstAFI CTTAAG 2 cut(s) 524, 1061
BstBI TTCGAA 1 cut(s) 1254
BstC8I GCNNGC 4 cut(s) 400, 424, 1198, 1448
BstDEI CTNAG 6 cut(s) 652, 921, 1326, 1352, 1398, 1463
BstF5I GGATG 1 cut(s) 933
BstFNI CGCG 1 cut(s) 426
BstMAI GTCTC 1 cut(s) 817
BstMCI CGRYCG 1 cut(s) 430
BstNI CCWGG 1 cut(s) 1540
BstNSI RCATGY 1 cut(s) 1200
BstSCI CCNGG 4 cut(s) 48, 1185, 1186, 1538
BstSFI CTRYAG 1 cut(s) 1548
BstSLI GKGCMC 1 cut(s) 119
BstUI CGCG 1 cut(s) 426
BstV1I GCAGC 1 cut(s) 94
BstV2I GAAGAC 1 cut(s) 321
BstX2I RGATCY 2 cut(s) 45, 793
BstYI RGATCY 2 cut(s) 45, 793
BsuRI GGCC 2 cut(s) 1380, 1446
BtsCI GGATG 1 cut(s) 933
BtsIMutI CAGTG 4 cut(s) 117, 119, 232, 1024
BtuMI TCGCGA 1 cut(s) 426
BveI ACCTGC 1 cut(s) 1541
Cac8I GCNNGC 4 cut(s) 400, 424, 1198, 1448
CaiI CAGNNNCTG 1 cut(s) 659
Cfr9I CCCGGG 1 cut(s) 1186
Csp6I GTAC 6 cut(s) 204, 470, 901, 1121, 1162, 1570
CviAII CATG 8 cut(s) 77, 188, 320, 451, 570, 805, 1044, 1197
CviQI GTAC 6 cut(s) 204, 470, 901, 1121, 1162, 1570
DdeI CTNAG 6 cut(s) 652, 921, 1326, 1352, 1398, 1463
Eam1104I CTCTTC 4 cut(s) 188, 1202, 1435, 1494
EarI CTCTTC 4 cut(s) 188, 1202, 1435, 1494
Ecl136II GAGCTC 1 cut(s) 1212
Eco130I CCWWGG 1 cut(s) 1381
Eco147I AGGCCT 1 cut(s) 1446
Eco24I GRGCYC 1 cut(s) 1214
Eco32I GATATC 1 cut(s) 478
Eco53kI GAGCTC 1 cut(s) 1212
Eco57I CTGAAG 1 cut(s) 18
Eco88I CYCGRG 2 cut(s) 1082, 1186
EcoICRI GAGCTC 1 cut(s) 1212
EcoRI GAATTC 1 cut(s) 1498
EcoRII CCWGG 1 cut(s) 1538
EcoRV GATATC 1 cut(s) 478
EcoT14I CCWWGG 1 cut(s) 1381
EcoT22I ATGCAT 1 cut(s) 782
EcoT38I GRGCYC 1 cut(s) 1214
ErhI CCWWGG 1 cut(s) 1381
FaeI CATG 8 cut(s) 80, 191, 323, 454, 573, 808, 1047, 1200
FatI CATG 8 cut(s) 76, 187, 319, 450, 569, 804, 1043, 1196
FblI GTMKAC 1 cut(s) 1371
Fnu4HI GCNGC 1 cut(s) 83
FokI GGATG 1 cut(s) 920
FriOI GRGCYC 1 cut(s) 1214
Fsp4HI GCNGC 1 cut(s) 83
FspBI CTAG 3 cut(s) 294, 575, 635
GluI GCNGC 1 cut(s) 83
GsuI CTGGAG 1 cut(s) 848
HaeIII GGCC 2 cut(s) 1380, 1446
HapII CCGG 3 cut(s) 49, 128, 1187
Hin1II CATG 8 cut(s) 80, 191, 323, 454, 573, 808, 1047, 1200
HincII GTYRAC 3 cut(s) 521, 871, 1372
HindII GTYRAC 3 cut(s) 521, 871, 1372
HindIII AAGCTT 1 cut(s) 30
HinfI GANTC 7 cut(s) 93, 138, 222, 316, 886, 1087, 1459
HpaII CCGG 3 cut(s) 49, 128, 1187
HphI GGTGA 3 cut(s) 158, 377, 1349
Hpy166II GTNNAC 7 cut(s) 117, 521, 871, 1121, 1164, 1225, 1372
Hpy188I TCNGA 8 cut(s) 37, 157, 217, 655, 984, 1096, 1399, 1497
Hpy188III TCNNGA 7 cut(s) 306, 425, 816, 937, 1084, 1307, 1556
Hpy8I GTNNAC 7 cut(s) 117, 521, 871, 1121, 1164, 1225, 1372
HpyCH4III ACNGT 4 cut(s) 11, 203, 415, 1019
HpyCH4IV ACGT 1 cut(s) 282
HpyCH4V TGCA 9 cut(s) 117, 250, 494, 780, 966, 1302, 1406, 1450, 1550
HpyF3I CTNAG 6 cut(s) 652, 921, 1326, 1352, 1398, 1463
HpySE526I ACGT 1 cut(s) 282
Hsp92II CATG 8 cut(s) 80, 191, 323, 454, 573, 808, 1047, 1200
LguI GCTCTTC 1 cut(s) 1202
LmnI GCTCC 2 cut(s) 130, 1476
Lsp1109I GCAGC 1 cut(s) 94
LweI GCATC 4 cut(s) 112, 259, 411, 1553
MaeI CTAG 3 cut(s) 294, 575, 635
MaeII ACGT 1 cut(s) 282
MaeIII GTNAC 2 cut(s) 1355, 1385
MbiI CCGCTC 1 cut(s) 1479
MfeI CAATTG 1 cut(s) 1297
MflI RGATCY 2 cut(s) 45, 793
MhlI GDGCHC 2 cut(s) 119, 1214
MlyI GAGTC 2 cut(s) 325, 1453
MmeI TCCRAC 1 cut(s) 1266
Mph1103I ATGCAT 1 cut(s) 782
MseI TTAA 5 cut(s) 525, 539, 1062, 1431, 1526
MslI CAYNNNNRTG 1 cut(s) 1017
MspA1I CMGCKG 1 cut(s) 144
MspCI CTTAAG 2 cut(s) 524, 1061
MspI CCGG 3 cut(s) 49, 128, 1187
MspR9I CCNGG 4 cut(s) 50, 1187, 1188, 1540
MunI CAATTG 1 cut(s) 1297
Mva1269I GAATGC 1 cut(s) 1408
MvaI CCWGG 1 cut(s) 1540
MvnI CGCG 1 cut(s) 426
NciI CCSGG 3 cut(s) 50, 1187, 1188
NlaIII CATG 8 cut(s) 80, 191, 323, 454, 573, 808, 1047, 1200
NlaIV GGNNCC 1 cut(s) 47
NmuCI GTSAC 1 cut(s) 1355
NruI TCGCGA 1 cut(s) 426
NsiI ATGCAT 1 cut(s) 782
NspI RCATGY 1 cut(s) 1200
NspV TTCGAA 1 cut(s) 1254
PaeI GCATGC 1 cut(s) 1200
PaeR7I CTCGAG 1 cut(s) 1082
PasI CCCWGGG 1 cut(s) 1539
PceI AGGCCT 1 cut(s) 1446
PciSI GCTCTTC 1 cut(s) 1202
PctI GAATGC 1 cut(s) 1408
PfeI GAWTC 5 cut(s) 93, 138, 222, 886, 1087
PfoI TCCNGGA 1 cut(s) 48
PkrI GCNGC 1 cut(s) 84
Ple19I CGATCG 1 cut(s) 430
PleI GAGTC 2 cut(s) 324, 1453
PpsI GAGTC 2 cut(s) 324, 1453
Psp124BI GAGCTC 1 cut(s) 1214
Psp6I CCWGG 1 cut(s) 1538
PspGI CCWGG 1 cut(s) 1538
PspN4I GGNNCC 1 cut(s) 47
PstI CTGCAG 1 cut(s) 1552
PstNI CAGNNNCTG 1 cut(s) 659
PsuI RGATCY 2 cut(s) 45, 793
PvuI CGATCG 1 cut(s) 430
RgaI GCGATCGC 1 cut(s) 430
RruI TCGCGA 1 cut(s) 426
RsaI GTAC 6 cut(s) 205, 471, 902, 1122, 1163, 1571
RsaNI GTAC 6 cut(s) 204, 470, 901, 1121, 1162, 1570
RseI CAYNNNNRTG 1 cut(s) 1017
SacI GAGCTC 1 cut(s) 1214
SalI GTCGAC 1 cut(s) 1370
SapI GCTCTTC 1 cut(s) 1202
SaqAI TTAA 5 cut(s) 525, 539, 1062, 1431, 1526
SatI GCNGC 1 cut(s) 83
ScaI AGTACT 1 cut(s) 205
SchI GAGTC 2 cut(s) 325, 1453
ScrFI CCNGG 4 cut(s) 50, 1187, 1188, 1540
SduI GDGCHC 2 cut(s) 119, 1214
SfaAI GCGATCGC 1 cut(s) 430
SfaNI GCATC 4 cut(s) 112, 259, 411, 1553
SfcI CTRYAG 1 cut(s) 1548
Sfr274I CTCGAG 1 cut(s) 1082
SfuI TTCGAA 1 cut(s) 1254
SgfI GCGATCGC 1 cut(s) 430
SlaI CTCGAG 1 cut(s) 1082
SmaI CCCGGG 1 cut(s) 1188
SmiMI CAYNNNNRTG 1 cut(s) 1017
SmlI CTYRAG 6 cut(s) 524, 1061, 1082, 1305, 1556, 1564
SmoI CTYRAG 6 cut(s) 524, 1061, 1082, 1305, 1556, 1564
SpeI ACTAGT 1 cut(s) 293
SphI GCATGC 1 cut(s) 1200
SseBI AGGCCT 1 cut(s) 1446
SsiI CCGC 2 cut(s) 144, 1479
SspI AATATT 1 cut(s) 1006
SspMI CTAG 3 cut(s) 294, 575, 635
SstI GAGCTC 1 cut(s) 1214
StuI AGGCCT 1 cut(s) 1446
StyD4I CCNGG 4 cut(s) 48, 1185, 1186, 1538
StyI CCWWGG 1 cut(s) 1381
TaaI ACNGT 4 cut(s) 11, 203, 415, 1019
TaiI ACGT 1 cut(s) 285
TaqI TCGA 8 cut(s) 307, 474, 858, 1071, 1083, 1233, 1254, 1371
TatI WGTACW 3 cut(s) 203, 469, 900
TfiI GAWTC 5 cut(s) 93, 138, 222, 886, 1087
Tru1I TTAA 5 cut(s) 525, 539, 1062, 1431, 1526
Tru9I TTAA 5 cut(s) 525, 539, 1062, 1431, 1526
TscAI CASTG 4 cut(s) 119, 124, 232, 1024
TseFI GTSAC 1 cut(s) 1355
TseI GCWGC 1 cut(s) 82
Tsp45I GTSAC 1 cut(s) 1355
TspDTI ATGAA 6 cut(s) 201, 387, 681, 1001, 1032, 1184
TspMI CCCGGG 1 cut(s) 1186
TspRI CASTG 4 cut(s) 119, 124, 232, 1024
Vha464I CTTAAG 2 cut(s) 524, 1061
VneI GTGCAC 1 cut(s) 115
XapI RAATTY 4 cut(s) 357, 750, 1109, 1498
XceI RCATGY 1 cut(s) 1200
XhoI CTCGAG 1 cut(s) 1082
XmaI CCCGGG 1 cut(s) 1186
XmiI GTMKAC 1 cut(s) 1371
XspI CTAG 3 cut(s) 294, 575, 635
ZrmI AGTACT 1 cut(s) 205
Zsp2I ATGCAT 1 cut(s) 782
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.