Rroxscaffold_4G00304800

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000467
Physical Location & Seq
Forward (+)
25437807 .. 25441210
3404 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00304800.1

Sequence Viewer

Length: 1623 bp
ATGGCTCACCACGAATCCCGGCGACTCAATCCAAGACGAACCGCAACGGGCAGCGGAGCTCCGGAGGTCATGATCTACTTTCGGCTCGGCTTGGACAATTCGGTTGTAGATCAGGAAGTAATAAACAAAGTTAATAAGCCAATGAGCGACAGAATCAGCAATCTTCCTGATCGTGTACTGCACCACACACTCTCTTTTCTACCCATCAAATCCATTGCCCAAACTAGTCTGTTATCTAAGAGATGGAATTCTGTATGGGGTTCCATTCCTACCCTCGACTTTTCCACCGTTCCTCTTCCAAACCTCGATCCTGAAAATCAAAGTAAAGCACTGGCATCGATCATAACTTCTGTGTTGAGCCGCCACCGTGAAGACTCTAATGTAAAGGTTTTTCGGGTCAGTTCTCGTCTAGGGTTTTGTCATATGAGTTCTTCTTGTTTGCATGATTGTGTGAGTTGGCTAGTGAAGCAAAAAGTTGAAGAACTAGTACTCGAAGTTGGGTCAAGTGGTAGATTTGATTTGCCTCTTTGTGTATTTCAATGTGATTCATTGAGATGTCTAAAGTTGGATGCGCACATTTCATGGTTTGTATCTCCATCATTTTGGTCGGGAGCTACCAATGGTCTCGGTTCACTTCACACCTTGTCTCTAGCTCATGTGGATTTCTTGTTTAATTGTTTGTGTGAGGATTTGTTTTCTGGTTCTTCATTCCCTTGTCTAGAGAGTTTGACCATTCAGAGTTGTAATGGAATGACTCATCTGAAAATTAGCTGTCCCAACCTGAAAGTTGTGCACGTGAATTCGATGAATATAAACAGCCTGGACATCTCCGGAATGAGACTGGAGAGTTTGCGAGTCTCGTTTTCTTTCTTCAGGTGTGACAGTGAAAGCTGGGTCAGCGTTTTCGCTCCAAATCTGAAAACTTTCTCTTGGTTGGCTAATTGCATTACTGAGAAATGTTTGATCCATGGCTTTCCTGCCCTGAAAACATCTCACATAAACTGTCGGTGTCCAGGCGATCTTAGCATGGCGAAGATTCATAGTGCAGTAAATCTTGTTTGTGCATCATCCCAAGTTCAAAGCCTTGTCATATCCCGCGACTTTCTCCAGGTTTTATCAAAAATCTATCTTGAAGGTGGTGGTCTACTACATCCATTTGTTCAGCTTCAGACCTTGAAAATTCAGACTACTAGTCTGAACAGACATGATATTCCAGGTATAGCTTGTCTATTCAAGAGCTCTCCAACTGTCCAGACCATCATAATTGAGATACTTGGTGATAGAGCAAGAGATAATGTTCAGAAATGGTTCGATGATTCGTTGGACAAGACTTATTGCACGGAAGTGCAATACTGGGAAAGTCAAGCTCAGGCTTTAAGTGACTTCCTATATCACCTGAAGGTAGCAATGATTCACGTCAAGGGATCCACGATCCATCAGTGTGTGGTTACTCTTGCCAGGTTTTTGCTTGAACATGGAAAAGGCTTGCAAGAAATGGTTCTAAGTTCCCAGCAGCTCAACTCCGACAATCTCTCTCTTTGGGAGAATCAAATAAGGTTACTAGATGGATTCCCTAGGGCATCTGCTGATGTCAGACTTGCAGTTGCTCAAACCACTTCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

540

Amino Acids

60.27

Weight (kDa)

7.82

Isoelectric Point (pI)

44.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 52 - 88 8.4e-09 F-box domain
LRR_At1g61320_AtMIF1 PF23622 124 - 285 2.5e-06 At1g61320/AtMIF1, LRR domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000467)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g02550 FvH4_6g26921 FvH4_6g45630
malus_domestica MD01G1113200.v1.1 MD09G1101600.v1.1 MD17G1084600.v1.1
prunus_persica Prupe.3G224400_v2.0.a1 Prupe.3G224500_v2.0.a1 Prupe.3G224600_v2.0.a1
pyrus_communis pycom02g19930 pycom09g00760 pycom09g00770 pycom17g08170
rosa_chinensis RchiOBHm_Chr1g0350511 RchiOBHm_Chr2g0086171 RchiOBHm_Chr2g0117831 RchiOBHm_Chr3g0450391 RchiOBHm_Chr4g0409631 RchiOBHm_Chr5g0039731
rosa_laevigata RLG00000008538 RLG00000018375 RLG00000021415 RLG00000028481 RLG00000033926 RLG00000033937 RLG00000033938 RLG00000033939 RLG00000033941
rosa_multiflora Rmu_sc0000103.1_g000011 Rmu_sc0000330.1_g000009 Rmu_sc0000652.1_g000002 Rmu_sc0001507.1_g000017 Rmu_sc0004020.1_g000010 Rmu_sc0026676.1_g000001 Rmu_ssc0000083.1_g000022 Rmu_ssc0000400.1_g000021
rosa_roxburghii Rroxscaffold_1G00040760 Rroxscaffold_1G00041490 Rroxscaffold_1G00041500 Rroxscaffold_1G00041630 Rroxscaffold_2G00087990 Rroxscaffold_2G00126200 Rroxscaffold_4G00304800 Rroxscaffold_5G00354160 Rroxscaffold_5G00354170
rosa_rugosa Rorug01G0211500 Rorug02G0214300 Rorug02G0496800 Rorug02G0627700 Rorug04G0095600 Rorug05G0181700
rosa_samantha Rh1AG226300 Rh1BG194700 Rh1CG211100 Rh1DG222900 Rh2AG270500 Rh2AG270600 Rh2AG562900 Rh2AG563000 Rh2BG281900 Rh2BG282000 Rh2BG575700 Rh2CG269300 Rh2CG269400 Rh2DG278300 Rh2DG296200 Rh2DG585900 Rh3AG028000 Rh3AG028100 Rh3BG028500 Rh3BG028600 Rh3CG027300 Rh3CG027400 Rh3DG028400 Rh3DG028500 Rh4BG156800 Rh4CG167300 Rh4CG167400 Rh4DG151100 Rh5AG268000 Rh5BG272400 Rh5BG272500 Rh5CG304000 Rh5CG305000 Rh5CG305100 Rh5DG280500
rosa_wichuraiana Rw1G019530 Rw2G021370 Rw4G012860 Rw4G012970 Rw5G025070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 573
AccI GTMKAC 1 cut(s) 1144
AccII CGCG 1 cut(s) 1098
AccIII TCCGGA 2 cut(s) 61, 830
AciI CCGC 4 cut(s) 42, 54, 361, 1096
AclWI GGATC 5 cut(s) 302, 958, 1419, 1426, 1432
AcsI RAATTY 3 cut(s) 247, 799, 1179
AcuI CTGAAG 3 cut(s) 856, 1151, 1418
AcvI CACGTG 1 cut(s) 796
AdeI CACNNNGTG 1 cut(s) 1620
AfaI GTAC 2 cut(s) 177, 489
AgsI TTSAA 7 cut(s) 479, 539, 1079, 1133, 1177, 1234, 1472
AhdI GACNNNNNGTC 1 cut(s) 1191
AhlI ACTAGT 3 cut(s) 224, 484, 1190
AjiI CACGTC 1 cut(s) 1417
AjnI CCWGG 5 cut(s) 819, 1012, 1107, 1213, 1457
AleI CACNNNNGTG 1 cut(s) 1343
Alw21I GWGCWC 3 cut(s) 61, 795, 1241
Alw26I GTCTC 4 cut(s) 629, 651, 832, 862
Alw44I GTGCAC 1 cut(s) 791
AlwI GGATC 5 cut(s) 302, 958, 1419, 1426, 1432
Aor13HI TCCGGA 2 cut(s) 61, 830
ApaLI GTGCAC 1 cut(s) 791
ApeKI GCWGC 2 cut(s) 51, 1513
ApoI RAATTY 3 cut(s) 247, 799, 1179
Asp700I GAANNNNTTC 3 cut(s) 923, 1307, 1497
AspA2I CCTAGG 1 cut(s) 1574
AspLEI GCGC 1 cut(s) 574
AsuC2I CCSGG 1 cut(s) 19
AsuHPI GGTGA 2 cut(s) 1289, 1385
AvrII CCTAGG 1 cut(s) 1574
BaeGI GKGCMC 1 cut(s) 795
BamHI GGATCC 1 cut(s) 1424
BanII GRGCYC 2 cut(s) 61, 1241
BarI GAAGNNNNNNTAC 2 cut(s) 471, 503
BbrPI CACGTG 1 cut(s) 796
BbsI GAAGAC 1 cut(s) 378
Bbv12I GWGCWC 3 cut(s) 61, 795, 1241
BbvI GCAGC 2 cut(s) 63, 1525
BccI CCATC 6 cut(s) 212, 237, 604, 1265, 1443, 1559
BcgI CGANNNNNNTGC 2 cut(s) 318, 352
BciT130I CCWGG 5 cut(s) 821, 1014, 1109, 1215, 1459
BcnI CCSGG 1 cut(s) 19
BcoDI GTCTC 4 cut(s) 629, 651, 832, 862
BcuI ACTAGT 3 cut(s) 224, 484, 1190
BfaI CTAG 9 cut(s) 225, 410, 461, 485, 650, 719, 1191, 1562, 1575
BisI GCNGC 3 cut(s) 52, 361, 1514
BlnI CCTAGG 1 cut(s) 1574
BlsI GCNGC 3 cut(s) 53, 362, 1515
BmcAI AGTACT 1 cut(s) 489
Bme1390I CCNGG 6 cut(s) 19, 821, 1014, 1109, 1215, 1459
BmeRI GACNNNNNGTC 1 cut(s) 1191
BmgBI CACGTC 1 cut(s) 1417
BmiI GGNNCC 2 cut(s) 262, 1426
BmrFI CCNGG 6 cut(s) 19, 821, 1014, 1109, 1215, 1459
BmrI ACTGGG 1 cut(s) 1363
BmsI GCATC 4 cut(s) 344, 559, 1073, 1589
BmuI ACTGGG 1 cut(s) 1363
BpiI GAAGAC 1 cut(s) 378
BpmI CTGGAG 2 cut(s) 863, 1091
Bpu10I CCTNAGC 1 cut(s) 1368
BpuMI CCSGG 1 cut(s) 19
Bsa29I ATCGAT 1 cut(s) 338
BsaAI YACGTR 1 cut(s) 796
BsaI GGTCTC 1 cut(s) 629
BsaJI CCNNGG 2 cut(s) 967, 1574
BsaWI WCCGGW 2 cut(s) 61, 830
Bse1I ACTGG 3 cut(s) 336, 846, 1358
Bse3DI GCAATG 2 cut(s) 213, 1413
BseAI TCCGGA 2 cut(s) 61, 830
BseBI CCWGG 5 cut(s) 821, 1014, 1109, 1215, 1459
BseCI ATCGAT 1 cut(s) 338
BseDI CCNNGG 2 cut(s) 967, 1574
BseGI GGATG 3 cut(s) 574, 1067, 1150
BseMI GCAATG 2 cut(s) 213, 1413
BseMII CTCAG 2 cut(s) 942, 1382
BseNI ACTGG 3 cut(s) 336, 846, 1358
BseSI GKGCMC 1 cut(s) 795
BseXI GCAGC 2 cut(s) 63, 1525
BseYI CCCAGC 2 cut(s) 891, 1509
BsgI GTGCAG 2 cut(s) 164, 1065
Bsh1236I CGCG 1 cut(s) 1098
BshVI ATCGAT 1 cut(s) 338
BsiHKAI GWGCWC 3 cut(s) 61, 795, 1241
BsiSI CCGG 3 cut(s) 19, 62, 831
BslFI GGGAC 1 cut(s) 759
BsmAI GTCTC 4 cut(s) 629, 651, 832, 862
BsmFI GGGAC 1 cut(s) 759
Bso31I GGTCTC 1 cut(s) 629
Bsp1286I GDGCHC 3 cut(s) 61, 795, 1241
Bsp13I TCCGGA 2 cut(s) 61, 830
Bsp143I GATC 9 cut(s) 72, 109, 169, 307, 339, 963, 1018, 1424, 1431
Bsp19I CCATGG 1 cut(s) 967
BspACI CCGC 4 cut(s) 42, 54, 361, 1096
BspCNI CTCAG 2 cut(s) 943, 1381
BspDI ATCGAT 1 cut(s) 338
BspEI TCCGGA 2 cut(s) 61, 830
BspFNI CGCG 1 cut(s) 1098
BspHI TCATGA 1 cut(s) 69
BspLI GGNNCC 2 cut(s) 262, 1426
BspPI GGATC 5 cut(s) 302, 958, 1419, 1426, 1432
BspTNI GGTCTC 1 cut(s) 629
BsrDI GCAATG 2 cut(s) 213, 1413
BsrI ACTGG 3 cut(s) 336, 846, 1358
BssECI CCNNGG 2 cut(s) 967, 1574
BssMI GATC 9 cut(s) 72, 109, 169, 307, 339, 963, 1018, 1424, 1431
BssT1I CCWWGG 2 cut(s) 967, 1574
Bst2UI CCWGG 5 cut(s) 821, 1014, 1109, 1215, 1459
Bst4CI ACNGT 5 cut(s) 289, 368, 884, 1004, 1249
Bst6I CTCTTC 1 cut(s) 300
BstBAI YACGTR 1 cut(s) 796
BstC8I GCNNGC 1 cut(s) 1487
BstDEI CTNAG 5 cut(s) 237, 951, 1022, 1368, 1502
BstDSI CCRYGG 1 cut(s) 967
BstF5I GGATG 3 cut(s) 574, 1067, 1150
BstFNI CGCG 1 cut(s) 1098
BstHHI GCGC 1 cut(s) 574
BstKTI GATC 9 cut(s) 75, 112, 172, 310, 342, 966, 1021, 1427, 1434
BstMAI GTCTC 4 cut(s) 629, 651, 832, 862
BstMBI GATC 9 cut(s) 72, 109, 169, 307, 339, 963, 1018, 1424, 1431
BstMWI GCNNNNNNNGC 3 cut(s) 466, 897, 1023
BstNI CCWGG 5 cut(s) 821, 1014, 1109, 1215, 1459
BstSCI CCNGG 6 cut(s) 17, 819, 1012, 1107, 1213, 1457
BstSLI GKGCMC 1 cut(s) 795
BstUI CGCG 1 cut(s) 1098
BstV1I GCAGC 2 cut(s) 63, 1525
BstV2I GAAGAC 1 cut(s) 378
BstX2I RGATCY 1 cut(s) 1424
BstXI CCANNNNNNTGG 1 cut(s) 603
BstYI RGATCY 1 cut(s) 1424
Bsu15I ATCGAT 1 cut(s) 338
BsuTUI ATCGAT 1 cut(s) 338
BtgI CCRYGG 1 cut(s) 967
BtrI CACGTC 1 cut(s) 1417
BtsCI GGATG 3 cut(s) 574, 1067, 1150
BtsIMutI CAGTG 3 cut(s) 329, 889, 1445
Cac8I GCNNGC 1 cut(s) 1487
CciI TCATGA 1 cut(s) 69
CfoI GCGC 1 cut(s) 574
ClaI ATCGAT 1 cut(s) 338
Csp6I GTAC 2 cut(s) 176, 488
CviAII CATG 8 cut(s) 70, 443, 582, 656, 968, 1027, 1205, 1475
CviQI GTAC 2 cut(s) 176, 488
DdeI CTNAG 5 cut(s) 237, 951, 1022, 1368, 1502
DpnI GATC 9 cut(s) 74, 111, 171, 309, 341, 965, 1020, 1426, 1433
DpnII GATC 9 cut(s) 72, 109, 169, 307, 339, 963, 1018, 1424, 1431
DraIII CACNNNGTG 1 cut(s) 1620
DriI GACNNNNNGTC 1 cut(s) 1191
Eam1104I CTCTTC 1 cut(s) 300
Eam1105I GACNNNNNGTC 1 cut(s) 1191
EarI CTCTTC 1 cut(s) 300
Ecl136II GAGCTC 2 cut(s) 59, 1239
Eco130I CCWWGG 2 cut(s) 967, 1574
Eco24I GRGCYC 2 cut(s) 61, 1241
Eco31I GGTCTC 1 cut(s) 629
Eco53kI GAGCTC 2 cut(s) 59, 1239
Eco57I CTGAAG 3 cut(s) 856, 1151, 1418
Eco72I CACGTG 1 cut(s) 796
EcoICRI GAGCTC 2 cut(s) 59, 1239
EcoRI GAATTC 2 cut(s) 247, 799
EcoRII CCWGG 5 cut(s) 819, 1012, 1107, 1213, 1457
EcoT14I CCWWGG 2 cut(s) 967, 1574
EcoT38I GRGCYC 2 cut(s) 61, 1241
ErhI CCWWGG 2 cut(s) 967, 1574
FaeI CATG 8 cut(s) 73, 446, 585, 659, 971, 1030, 1208, 1478
FaqI GGGAC 1 cut(s) 759
FatI CATG 8 cut(s) 69, 442, 581, 655, 967, 1026, 1204, 1474
FauI CCCGC 1 cut(s) 1103
FauNDI CATATG 1 cut(s) 423
FblI GTMKAC 1 cut(s) 1144
Fnu4HI GCNGC 3 cut(s) 52, 361, 1514
FokI GGATG 3 cut(s) 581, 1054, 1137
FriOI GRGCYC 2 cut(s) 61, 1241
Fsp4HI GCNGC 3 cut(s) 52, 361, 1514
FspAI RTGCGCAY 1 cut(s) 573
FspBI CTAG 9 cut(s) 225, 410, 461, 485, 650, 719, 1191, 1562, 1575
FspI TGCGCA 1 cut(s) 573
GlaI GCGC 1 cut(s) 573
GluI GCNGC 3 cut(s) 52, 361, 1514
GsaI CCCAGC 2 cut(s) 895, 1513
GsuI CTGGAG 2 cut(s) 863, 1091
HapII CCGG 3 cut(s) 19, 62, 831
HhaI GCGC 1 cut(s) 574
Hin1II CATG 8 cut(s) 73, 446, 585, 659, 971, 1030, 1208, 1478
Hin6I GCGC 1 cut(s) 572
HinP1I GCGC 1 cut(s) 572
HpaII CCGG 3 cut(s) 19, 62, 831
HphI GGTGA 2 cut(s) 1289, 1385
Hpy166II GTNNAC 4 cut(s) 176, 632, 793, 1145
Hpy188I TCNGA 9 cut(s) 738, 762, 918, 1170, 1185, 1197, 1302, 1525, 1595
Hpy8I GTNNAC 4 cut(s) 176, 632, 793, 1145
HpyAV CCTTC 2 cut(s) 1127, 1393
HpyCH4III ACNGT 5 cut(s) 289, 368, 884, 1004, 1249
HpyCH4IV ACGT 2 cut(s) 795, 1416
HpyF10VI GCNNNNNNNGC 3 cut(s) 466, 897, 1023
HpyF3I CTNAG 5 cut(s) 237, 951, 1022, 1368, 1502
HpySE526I ACGT 2 cut(s) 795, 1416
Hsp92II CATG 8 cut(s) 73, 446, 585, 659, 971, 1030, 1208, 1478
HspAI GCGC 1 cut(s) 572
Kpn2I TCCGGA 2 cut(s) 61, 830
Kzo9I GATC 9 cut(s) 72, 109, 169, 307, 339, 963, 1018, 1424, 1431
LmnI GCTCC 4 cut(s) 56, 64, 611, 913
Lsp1109I GCAGC 2 cut(s) 63, 1525
LweI GCATC 4 cut(s) 344, 559, 1073, 1589
MaeI CTAG 9 cut(s) 225, 410, 461, 485, 650, 719, 1191, 1562, 1575
MaeII ACGT 2 cut(s) 795, 1416
MaeIII GTNAC 4 cut(s) 878, 1379, 1447, 1557
MalI GATC 9 cut(s) 74, 111, 171, 309, 341, 965, 1020, 1426, 1433
MboI GATC 9 cut(s) 72, 109, 169, 307, 339, 963, 1018, 1424, 1431
MboII GAAGA 8 cut(s) 155, 287, 383, 423, 491, 696, 862, 1045
MflI RGATCY 1 cut(s) 1424
MhlI GDGCHC 3 cut(s) 61, 795, 1241
MluCI AATT 8 cut(s) 97, 247, 673, 765, 799, 940, 1179, 1263
MlyI GAGTC 4 cut(s) 18, 368, 748, 864
MmeI TCCRAC 4 cut(s) 546, 1268, 1302, 1548
MnlI CCTC 6 cut(s) 58, 284, 303, 314, 534, 679
MroI TCCGGA 2 cut(s) 61, 830
MroXI GAANNNNTTC 3 cut(s) 923, 1307, 1497
MseI TTAA 3 cut(s) 132, 672, 1376
MslI CAYNNNNRTG 4 cut(s) 447, 553, 1343, 1440
MspA1I CMGCKG 1 cut(s) 54
MspI CCGG 3 cut(s) 19, 62, 831
MspR9I CCNGG 6 cut(s) 19, 821, 1014, 1109, 1215, 1459
MvaI CCWGG 5 cut(s) 821, 1014, 1109, 1215, 1459
MvnI CGCG 1 cut(s) 1098
MwoI GCNNNNNNNGC 3 cut(s) 466, 897, 1023
NciI CCSGG 1 cut(s) 19
NcoI CCATGG 1 cut(s) 967
NdeI CATATG 1 cut(s) 423
NdeII GATC 9 cut(s) 72, 109, 169, 307, 339, 963, 1018, 1424, 1431
NlaIII CATG 8 cut(s) 73, 446, 585, 659, 971, 1030, 1208, 1478
NlaIV GGNNCC 2 cut(s) 262, 1426
NmeAIII GCCGAG 1 cut(s) 66
NmuCI GTSAC 2 cut(s) 878, 1379
NsbI TGCGCA 1 cut(s) 573
OliI CACNNNNGTG 1 cut(s) 1343
PagI TCATGA 1 cut(s) 69
PdmI GAANNNNTTC 3 cut(s) 923, 1307, 1497
PfeI GAWTC 8 cut(s) 14, 153, 545, 1036, 1316, 1411, 1546, 1569
PkrI GCNGC 3 cut(s) 53, 362, 1515
PleI GAGTC 4 cut(s) 18, 368, 748, 863
PmaCI CACGTG 1 cut(s) 796
PmlI CACGTG 1 cut(s) 796
PpsI GAGTC 4 cut(s) 18, 368, 748, 863
Ppu21I YACGTR 1 cut(s) 796
Psp124BI GAGCTC 2 cut(s) 61, 1241
Psp6I CCWGG 5 cut(s) 819, 1012, 1107, 1213, 1457
PspCI CACGTG 1 cut(s) 796
PspFI CCCAGC 2 cut(s) 891, 1509
PspGI CCWGG 5 cut(s) 819, 1012, 1107, 1213, 1457
PspN4I GGNNCC 2 cut(s) 262, 1426
PsuI RGATCY 1 cut(s) 1424
RsaI GTAC 2 cut(s) 177, 489
RsaNI GTAC 2 cut(s) 176, 488
RseI CAYNNNNRTG 4 cut(s) 447, 553, 1343, 1440
SacI GAGCTC 2 cut(s) 61, 1241
SaqAI TTAA 3 cut(s) 132, 672, 1376
SatI GCNGC 3 cut(s) 52, 361, 1514
Sau3AI GATC 9 cut(s) 72, 109, 169, 307, 339, 963, 1018, 1424, 1431
ScaI AGTACT 1 cut(s) 489
SchI GAGTC 4 cut(s) 18, 368, 748, 864
ScrFI CCNGG 6 cut(s) 19, 821, 1014, 1109, 1215, 1459
SduI GDGCHC 3 cut(s) 61, 795, 1241
SfaNI GCATC 4 cut(s) 344, 559, 1073, 1589
SmiMI CAYNNNNRTG 4 cut(s) 447, 553, 1343, 1440
SpeI ACTAGT 3 cut(s) 224, 484, 1190
Sse9I AATT 8 cut(s) 97, 247, 673, 765, 799, 940, 1179, 1263
SsiI CCGC 4 cut(s) 42, 54, 361, 1096
SspMI CTAG 9 cut(s) 225, 410, 461, 485, 650, 719, 1191, 1562, 1575
SstI GAGCTC 2 cut(s) 61, 1241
StyD4I CCNGG 6 cut(s) 17, 819, 1012, 1107, 1213, 1457
StyI CCWWGG 2 cut(s) 967, 1574
TaaI ACNGT 5 cut(s) 289, 368, 884, 1004, 1249
TaiI ACGT 2 cut(s) 798, 1419
TaqI TCGA 6 cut(s) 276, 306, 338, 492, 803, 1311
TasI AATT 8 cut(s) 97, 247, 673, 765, 799, 940, 1179, 1263
TatI WGTACW 2 cut(s) 175, 487
TauI GCSGC 1 cut(s) 363
TfiI GAWTC 8 cut(s) 14, 153, 545, 1036, 1316, 1411, 1546, 1569
Tru1I TTAA 3 cut(s) 132, 672, 1376
Tru9I TTAA 3 cut(s) 132, 672, 1376
TscAI CASTG 3 cut(s) 336, 889, 1445
TseFI GTSAC 2 cut(s) 878, 1379
TseI GCWGC 2 cut(s) 51, 1513
Tsp45I GTSAC 2 cut(s) 878, 1379
TspDTI ATGAA 5 cut(s) 537, 570, 696, 821, 1028
TspGWI ACGGA 1 cut(s) 1355
TspRI CASTG 3 cut(s) 336, 889, 1445
VneI GTGCAC 1 cut(s) 791
XapI RAATTY 3 cut(s) 247, 799, 1179
XbaI TCTAGA 1 cut(s) 718
XmaJI CCTAGG 1 cut(s) 1574
XmiI GTMKAC 1 cut(s) 1144
XmnI GAANNNNTTC 3 cut(s) 923, 1307, 1497
XspI CTAG 9 cut(s) 225, 410, 461, 485, 650, 719, 1191, 1562, 1575
ZrmI AGTACT 1 cut(s) 489
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.