F-box FBD LRR-repeat protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| F-box | PF00646 | 39 - 71 | 7.2e-07 | F-box domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 20 |
| AatII | GACGTC | 1 cut(s) | 354 |
| Acc36I | ACCTGC | 1 cut(s) | 1056 |
| AccI | GTMKAC | 1 cut(s) | 1012 |
| AccIII | TCCGGA | 1 cut(s) | 692 |
| AciI | CCGC | 4 cut(s) | 5, 79, 250, 1008 |
| AclWI | GGATC | 4 cut(s) | 81, 233, 287, 300 |
| AcsI | RAATTY | 2 cut(s) | 707, 1243 |
| AcyI | GRCGYC | 1 cut(s) | 351 |
| AfaI | GTAC | 2 cut(s) | 345, 654 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 287, 1065 |
| AflII | CTTAAG | 1 cut(s) | 401 |
| AflIII | ACRYGT | 1 cut(s) | 524 |
| AgeI | ACCGGT | 1 cut(s) | 300 |
| AjnI | CCWGG | 1 cut(s) | 1087 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1205, 1237 |
| AluBI | AGCT | 4 cut(s) | 68, 681, 834, 1113 |
| AluI | AGCT | 4 cut(s) | 68, 681, 834, 1113 |
| Alw21I | GWGCWC | 1 cut(s) | 1115 |
| Alw26I | GTCTC | 6 cut(s) | 358, 522, 694, 870, 1031, 1242 |
| AlwI | GGATC | 4 cut(s) | 81, 233, 287, 300 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 982 |
| Ama87I | CYCGRG | 2 cut(s) | 425, 1133 |
| Aor13HI | TCCGGA | 1 cut(s) | 692 |
| ApoI | RAATTY | 2 cut(s) | 707, 1243 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 193, 225, 1234, 1266 |
| AsiGI | ACCGGT | 1 cut(s) | 300 |
| AspA2I | CCTAGG | 1 cut(s) | 839 |
| AspS9I | GGNCC | 1 cut(s) | 878 |
| AsuC2I | CCSGG | 1 cut(s) | 288 |
| AsuHPI | GGTGA | 1 cut(s) | 769 |
| AvaI | CYCGRG | 2 cut(s) | 425, 1133 |
| AvaII | GGWCC | 1 cut(s) | 878 |
| AvrII | CCTAGG | 1 cut(s) | 839 |
| BamHI | GGATCC | 1 cut(s) | 292 |
| BanII | GRGCYC | 1 cut(s) | 1115 |
| BbsI | GAAGAC | 1 cut(s) | 102 |
| Bbv12I | GWGCWC | 1 cut(s) | 1115 |
| BccI | CCATC | 1 cut(s) | 198 |
| BciT130I | CCWGG | 1 cut(s) | 1089 |
| BcnI | CCSGG | 1 cut(s) | 288 |
| BcoDI | GTCTC | 6 cut(s) | 358, 522, 694, 870, 1031, 1242 |
| BfaI | CTAG | 5 cut(s) | 327, 461, 840, 1004, 1259 |
| BfmI | CTRYAG | 3 cut(s) | 262, 974, 1063 |
| BfrI | CTTAAG | 1 cut(s) | 401 |
| BfuAI | ACCTGC | 1 cut(s) | 1056 |
| BglII | AGATCT | 1 cut(s) | 851 |
| BisI | GCNGC | 1 cut(s) | 5 |
| BlnI | CCTAGG | 1 cut(s) | 839 |
| BlsI | GCNGC | 1 cut(s) | 6 |
| Bme1390I | CCNGG | 2 cut(s) | 288, 1089 |
| Bme18I | GGWCC | 1 cut(s) | 878 |
| BmeT110I | CYCGRG | 2 cut(s) | 425, 1133 |
| BmgT120I | GGNCC | 1 cut(s) | 878 |
| BmiI | GGNNCC | 3 cut(s) | 246, 294, 880 |
| BmrFI | CCNGG | 2 cut(s) | 288, 1089 |
| BmsI | GCATC | 1 cut(s) | 151 |
| BpiI | GAAGAC | 1 cut(s) | 102 |
| BpuEI | CTTGAG | 2 cut(s) | 924, 1055 |
| BpuMI | CCSGG | 1 cut(s) | 288 |
| BsaHI | GRCGYC | 1 cut(s) | 351 |
| BsaI | GGTCTC | 1 cut(s) | 870 |
| BsaJI | CCNNGG | 3 cut(s) | 287, 839, 1087 |
| BsaWI | WCCGGW | 3 cut(s) | 300, 560, 692 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 287, 1065 |
| Bse118I | RCCGGY | 1 cut(s) | 300 |
| Bse1I | ACTGG | 1 cut(s) | 186 |
| BseAI | TCCGGA | 1 cut(s) | 692 |
| BseBI | CCWGG | 1 cut(s) | 1089 |
| BseDI | CCNNGG | 3 cut(s) | 287, 839, 1087 |
| BseGI | GGATG | 1 cut(s) | 1201 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 287, 1065 |
| BseMII | CTCAG | 2 cut(s) | 141, 1247 |
| BseNI | ACTGG | 1 cut(s) | 186 |
| BseRI | GAGGAG | 1 cut(s) | 101 |
| BshTI | ACCGGT | 1 cut(s) | 300 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1115 |
| BsiHKCI | CYCGRG | 2 cut(s) | 425, 1133 |
| BsiSI | CCGG | 4 cut(s) | 287, 301, 561, 693 |
| BslFI | GGGAC | 2 cut(s) | 864, 1236 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 287, 1065 |
| BsmAI | GTCTC | 6 cut(s) | 358, 522, 694, 870, 1031, 1242 |
| BsmBI | CGTCTC | 1 cut(s) | 358 |
| BsmFI | GGGAC | 2 cut(s) | 864, 1236 |
| Bso31I | GGTCTC | 1 cut(s) | 870 |
| BsoBI | CYCGRG | 2 cut(s) | 425, 1133 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1115 |
| Bsp13I | TCCGGA | 1 cut(s) | 692 |
| Bsp143I | GATC | 8 cut(s) | 73, 121, 225, 292, 374, 619, 851, 919 |
| BspACI | CCGC | 4 cut(s) | 5, 79, 250, 1008 |
| BspCNI | CTCAG | 2 cut(s) | 140, 1246 |
| BspEI | TCCGGA | 1 cut(s) | 692 |
| BspLI | GGNNCC | 3 cut(s) | 246, 294, 880 |
| BspMAI | CTGCAG | 1 cut(s) | 1067 |
| BspMI | ACCTGC | 1 cut(s) | 1056 |
| BspPI | GGATC | 4 cut(s) | 81, 233, 287, 300 |
| BspQI | GCTCTTC | 1 cut(s) | 1209 |
| BspTI | CTTAAG | 1 cut(s) | 401 |
| BspTNI | GGTCTC | 1 cut(s) | 870 |
| BsrFI | RCCGGY | 1 cut(s) | 300 |
| BsrI | ACTGG | 1 cut(s) | 186 |
| BssAI | RCCGGY | 1 cut(s) | 300 |
| BssECI | CCNNGG | 3 cut(s) | 287, 839, 1087 |
| BssMI | GATC | 8 cut(s) | 73, 121, 225, 292, 374, 619, 851, 919 |
| BssNI | GRCGYC | 1 cut(s) | 351 |
| BssT1I | CCWWGG | 1 cut(s) | 839 |
| Bst2UI | CCWGG | 1 cut(s) | 1089 |
| Bst4CI | ACNGT | 6 cut(s) | 47, 107, 238, 440, 821, 978 |
| Bst6I | CTCTTC | 2 cut(s) | 478, 1209 |
| BstACI | GRCGYC | 1 cut(s) | 351 |
| BstAFI | CTTAAG | 1 cut(s) | 401 |
| BstC8I | GCNNGC | 2 cut(s) | 30, 1099 |
| BstDEI | CTNAG | 4 cut(s) | 127, 644, 682, 1233 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1063 |
| BstF5I | GGATG | 1 cut(s) | 1201 |
| BstKTI | GATC | 8 cut(s) | 76, 124, 228, 295, 377, 622, 854, 922 |
| BstMAI | GTCTC | 6 cut(s) | 358, 522, 694, 870, 1031, 1242 |
| BstMBI | GATC | 8 cut(s) | 73, 121, 225, 292, 374, 619, 851, 919 |
| BstNI | CCWGG | 1 cut(s) | 1089 |
| BstNSI | RCATGY | 2 cut(s) | 528, 1101 |
| BstSCI | CCNGG | 2 cut(s) | 286, 1087 |
| BstSFI | CTRYAG | 3 cut(s) | 262, 974, 1063 |
| BstV2I | GAAGAC | 1 cut(s) | 102 |
| BstX2I | RGATCY | 2 cut(s) | 292, 851 |
| BstYI | RGATCY | 2 cut(s) | 292, 851 |
| BtsCI | GGATG | 1 cut(s) | 1201 |
| BtsI | GCAGTG | 1 cut(s) | 370 |
| BtsIMutI | CAGTG | 3 cut(s) | 193, 243, 370 |
| BveI | ACCTGC | 1 cut(s) | 1056 |
| Cac8I | GCNNGC | 2 cut(s) | 30, 1099 |
| CaiI | CAGNNNCTG | 1 cut(s) | 982 |
| Cfr10I | RCCGGY | 1 cut(s) | 300 |
| Cfr13I | GGNCC | 1 cut(s) | 878 |
| CseI | GACGC | 1 cut(s) | 730 |
| Csp6I | GTAC | 2 cut(s) | 344, 653 |
| CspAI | ACCGGT | 1 cut(s) | 300 |
| CviAII | CATG | 4 cut(s) | 456, 525, 859, 1098 |
| CviQI | GTAC | 2 cut(s) | 344, 653 |
| DdeI | CTNAG | 4 cut(s) | 127, 644, 682, 1233 |
| DpnI | GATC | 8 cut(s) | 75, 123, 227, 294, 376, 621, 853, 921 |
| DpnII | GATC | 8 cut(s) | 73, 121, 225, 292, 374, 619, 851, 919 |
| DraI | TTTAAA | 1 cut(s) | 675 |
| Eam1104I | CTCTTC | 2 cut(s) | 478, 1209 |
| EarI | CTCTTC | 2 cut(s) | 478, 1209 |
| EciI | GGCGGA | 1 cut(s) | 94 |
| Ecl136II | GAGCTC | 1 cut(s) | 1113 |
| Eco130I | CCWWGG | 1 cut(s) | 839 |
| Eco24I | GRGCYC | 1 cut(s) | 1115 |
| Eco31I | GGTCTC | 1 cut(s) | 870 |
| Eco47I | GGWCC | 1 cut(s) | 878 |
| Eco53kI | GAGCTC | 1 cut(s) | 1113 |
| Eco88I | CYCGRG | 2 cut(s) | 425, 1133 |
| EcoICRI | GAGCTC | 1 cut(s) | 1113 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1063 |
| EcoO109I | RGGNCCY | 1 cut(s) | 878 |
| EcoRII | CCWGG | 1 cut(s) | 1087 |
| EcoT14I | CCWWGG | 1 cut(s) | 839 |
| EcoT38I | GRGCYC | 1 cut(s) | 1115 |
| ErhI | CCWWGG | 1 cut(s) | 839 |
| Esp3I | CGTCTC | 1 cut(s) | 358 |
| FaeI | CATG | 4 cut(s) | 459, 528, 862, 1101 |
| FaqI | GGGAC | 2 cut(s) | 864, 1236 |
| FatI | CATG | 4 cut(s) | 455, 524, 858, 1097 |
| FauI | CCCGC | 1 cut(s) | 257 |
| FblI | GTMKAC | 1 cut(s) | 1012 |
| Fnu4HI | GCNGC | 1 cut(s) | 5 |
| FokI | GGATG | 1 cut(s) | 1208 |
| FriOI | GRGCYC | 1 cut(s) | 1115 |
| Fsp4HI | GCNGC | 1 cut(s) | 5 |
| FspBI | CTAG | 5 cut(s) | 327, 461, 840, 1004, 1259 |
| GluI | GCNGC | 1 cut(s) | 5 |
| HapII | CCGG | 4 cut(s) | 287, 301, 561, 693 |
| HgaI | GACGC | 1 cut(s) | 730 |
| Hin1I | GRCGYC | 1 cut(s) | 351 |
| Hin1II | CATG | 4 cut(s) | 459, 528, 862, 1101 |
| HincII | GTYRAC | 1 cut(s) | 398 |
| HindII | GTYRAC | 1 cut(s) | 398 |
| HindIII | AAGCTT | 1 cut(s) | 66 |
| HinfI | GANTC | 6 cut(s) | 114, 208, 428, 1054, 1151, 1199 |
| HpaII | CCGG | 4 cut(s) | 287, 301, 561, 693 |
| HphI | GGTGA | 1 cut(s) | 769 |
| Hpy166II | GTNNAC | 4 cut(s) | 398, 503, 1013, 1126 |
| Hpy188I | TCNGA | 7 cut(s) | 73, 130, 297, 639, 870, 988, 1160 |
| Hpy188III | TCNNGA | 6 cut(s) | 198, 581, 693, 829, 1108, 1135 |
| Hpy8I | GTNNAC | 4 cut(s) | 398, 503, 1013, 1126 |
| Hpy99I | CGWCG | 1 cut(s) | 353 |
| HpyAV | CCTTC | 1 cut(s) | 585 |
| HpyCH4III | ACNGT | 6 cut(s) | 47, 107, 238, 440, 821, 978 |
| HpyCH4IV | ACGT | 2 cut(s) | 351, 480 |
| HpyCH4V | TGCA | 5 cut(s) | 32, 142, 606, 1065, 1209 |
| HpyF3I | CTNAG | 4 cut(s) | 127, 644, 682, 1233 |
| HpySE526I | ACGT | 2 cut(s) | 351, 480 |
| Hsp92I | GRCGYC | 1 cut(s) | 351 |
| Hsp92II | CATG | 4 cut(s) | 459, 528, 862, 1101 |
| Kpn2I | TCCGGA | 1 cut(s) | 692 |
| Kzo9I | GATC | 8 cut(s) | 73, 121, 225, 292, 374, 619, 851, 919 |
| LguI | GCTCTTC | 1 cut(s) | 1209 |
| LmnI | GCTCC | 1 cut(s) | 250 |
| LweI | GCATC | 1 cut(s) | 151 |
| MaeI | CTAG | 5 cut(s) | 327, 461, 840, 1004, 1259 |
| MaeII | ACGT | 2 cut(s) | 351, 480 |
| MaeIII | GTNAC | 3 cut(s) | 107, 1148, 1261 |
| MalI | GATC | 8 cut(s) | 75, 123, 227, 294, 376, 621, 853, 921 |
| MboI | GATC | 8 cut(s) | 73, 121, 225, 292, 374, 619, 851, 919 |
| MboII | GAAGA | 9 cut(s) | 104, 107, 213, 465, 558, 604, 907, 914, 1226 |
| MfeI | CAATTG | 2 cut(s) | 587, 1204 |
| MflI | RGATCY | 2 cut(s) | 292, 851 |
| MhlI | GDGCHC | 1 cut(s) | 1115 |
| MluCI | AATT | 9 cut(s) | 15, 282, 383, 587, 627, 707, 782, 1204, 1243 |
| MlyI | GAGTC | 3 cut(s) | 217, 437, 1145 |
| MmeI | TCCRAC | 2 cut(s) | 66, 1173 |
| MroI | TCCGGA | 1 cut(s) | 692 |
| MseI | TTAA | 6 cut(s) | 359, 402, 674, 1050, 1070, 1267 |
| MslI | CAYNNNNRTG | 1 cut(s) | 216 |
| MspCI | CTTAAG | 1 cut(s) | 401 |
| MspI | CCGG | 4 cut(s) | 287, 301, 561, 693 |
| MspR9I | CCNGG | 2 cut(s) | 288, 1089 |
| MunI | CAATTG | 2 cut(s) | 587, 1204 |
| MvaI | CCWGG | 1 cut(s) | 1089 |
| NciI | CCSGG | 1 cut(s) | 288 |
| NdeII | GATC | 8 cut(s) | 73, 121, 225, 292, 374, 619, 851, 919 |
| NlaIII | CATG | 4 cut(s) | 459, 528, 862, 1101 |
| NlaIV | GGNNCC | 3 cut(s) | 246, 294, 880 |
| NmuCI | GTSAC | 3 cut(s) | 107, 1148, 1261 |
| NspI | RCATGY | 2 cut(s) | 528, 1101 |
| PaeI | GCATGC | 1 cut(s) | 1101 |
| PaeR7I | CTCGAG | 2 cut(s) | 425, 1133 |
| PciI | ACATGT | 1 cut(s) | 524 |
| PciSI | GCTCTTC | 1 cut(s) | 1209 |
| PfeI | GAWTC | 3 cut(s) | 114, 1054, 1199 |
| PinAI | ACCGGT | 1 cut(s) | 300 |
| PkrI | GCNGC | 1 cut(s) | 6 |
| PleI | GAGTC | 3 cut(s) | 216, 436, 1145 |
| PpsI | GAGTC | 3 cut(s) | 216, 436, 1145 |
| PpuMI | RGGWCCY | 1 cut(s) | 878 |
| PscI | ACATGT | 1 cut(s) | 524 |
| PsiI | TTATAA | 1 cut(s) | 20 |
| Psp124BI | GAGCTC | 1 cut(s) | 1115 |
| Psp5II | RGGWCCY | 1 cut(s) | 878 |
| Psp6I | CCWGG | 1 cut(s) | 1087 |
| PspGI | CCWGG | 1 cut(s) | 1087 |
| PspN4I | GGNNCC | 3 cut(s) | 246, 294, 880 |
| PspPI | GGNCC | 1 cut(s) | 878 |
| PspPPI | RGGWCCY | 1 cut(s) | 878 |
| PspXI | VCTCGAGB | 1 cut(s) | 425 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 327, 359 |
| PstI | CTGCAG | 1 cut(s) | 1067 |
| PstNI | CAGNNNCTG | 1 cut(s) | 982 |
| PsuI | RGATCY | 2 cut(s) | 292, 851 |
| RsaI | GTAC | 2 cut(s) | 345, 654 |
| RsaNI | GTAC | 2 cut(s) | 344, 653 |
| RseI | CAYNNNNRTG | 1 cut(s) | 216 |
| SacI | GAGCTC | 1 cut(s) | 1115 |
| SapI | GCTCTTC | 1 cut(s) | 1209 |
| SaqAI | TTAA | 6 cut(s) | 359, 402, 674, 1050, 1070, 1267 |
| SatI | GCNGC | 1 cut(s) | 5 |
| Sau3AI | GATC | 8 cut(s) | 73, 121, 225, 292, 374, 619, 851, 919 |
| Sau96I | GGNCC | 1 cut(s) | 878 |
| SbfI | CCTGCAGG | 1 cut(s) | 1067 |
| SchI | GAGTC | 3 cut(s) | 217, 437, 1145 |
| ScrFI | CCNGG | 2 cut(s) | 288, 1089 |
| SdaI | CCTGCAGG | 1 cut(s) | 1067 |
| SduI | GDGCHC | 1 cut(s) | 1115 |
| SfaNI | GCATC | 1 cut(s) | 151 |
| SfcI | CTRYAG | 3 cut(s) | 262, 974, 1063 |
| Sfr274I | CTCGAG | 2 cut(s) | 425, 1133 |
| SinI | GGWCC | 1 cut(s) | 878 |
| SlaI | CTCGAG | 2 cut(s) | 425, 1133 |
| SmiI | ATTTAAAT | 1 cut(s) | 675 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 216 |
| SmlI | CTYRAG | 5 cut(s) | 401, 425, 939, 1034, 1133 |
| SmoI | CTYRAG | 5 cut(s) | 401, 425, 939, 1034, 1133 |
| SphI | GCATGC | 1 cut(s) | 1101 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 1067 |
| Sse9I | AATT | 9 cut(s) | 15, 282, 383, 587, 627, 707, 782, 1204, 1243 |
| SsiI | CCGC | 4 cut(s) | 5, 79, 250, 1008 |
| SspI | AATATT | 1 cut(s) | 36 |
| SspMI | CTAG | 5 cut(s) | 327, 461, 840, 1004, 1259 |
| SstI | GAGCTC | 1 cut(s) | 1115 |
| StyD4I | CCNGG | 2 cut(s) | 286, 1087 |
| StyI | CCWWGG | 1 cut(s) | 839 |
| SwaI | ATTTAAAT | 1 cut(s) | 675 |
| TaaI | ACNGT | 6 cut(s) | 47, 107, 238, 440, 821, 978 |
| TaiI | ACGT | 2 cut(s) | 354, 483 |
| TaqI | TCGA | 7 cut(s) | 199, 348, 391, 426, 663, 918, 1134 |
| TasI | AATT | 9 cut(s) | 15, 282, 383, 587, 627, 707, 782, 1204, 1243 |
| TatI | WGTACW | 1 cut(s) | 343 |
| TauI | GCSGC | 1 cut(s) | 7 |
| TfiI | GAWTC | 3 cut(s) | 114, 1054, 1199 |
| Tru1I | TTAA | 6 cut(s) | 359, 402, 674, 1050, 1070, 1267 |
| Tru9I | TTAA | 6 cut(s) | 359, 402, 674, 1050, 1070, 1267 |
| TscAI | CASTG | 3 cut(s) | 193, 243, 370 |
| TseFI | GTSAC | 3 cut(s) | 107, 1148, 1261 |
| Tsp45I | GTSAC | 3 cut(s) | 107, 1148, 1261 |
| TspDTI | ATGAA | 7 cut(s) | 234, 444, 558, 847, 914, 924, 1043 |
| TspGWI | ACGGA | 3 cut(s) | 433, 488, 1226 |
| TspRI | CASTG | 3 cut(s) | 193, 243, 370 |
| Vha464I | CTTAAG | 1 cut(s) | 401 |
| VpaK11BI | GGWCC | 1 cut(s) | 878 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1063 |
| XapI | RAATTY | 2 cut(s) | 707, 1243 |
| XceI | RCATGY | 2 cut(s) | 528, 1101 |
| XhoI | CTCGAG | 2 cut(s) | 425, 1133 |
| XmaJI | CCTAGG | 1 cut(s) | 839 |
| XmiI | GTMKAC | 1 cut(s) | 1012 |
| XspI | CTAG | 5 cut(s) | 327, 461, 840, 1004, 1259 |
| ZraI | GACGTC | 1 cut(s) | 352 |