Rh4AG214300

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
Physical Location & Seq
Forward (+)
50829055 .. 50861409
32355 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG214300.1

Sequence Viewer

Length: 321 bp
ATGTATGTTAATATCCCAGCTCGCTATCCATTCTTGAGAGAGAAATCGGAGAGAGATGAGAGATCGTTCAGAATGAGGGAGATGGAGAATAAAAATTCATGGCTCAATTACAAAAGTTTGGAACAGCAAGAAGTTCTTGATTCTCTTCTATGTATATGGCTGCGAGGAATTCGAAAAGAGGATTTAAAAGGTTTTTGGAAGACTCTGCTGCTAACAAAGTTGATCAAGGAAAATCTGGATGTAATTATGTTAGATCGAAAAGATTTAAAACAATGTTTACCCGAGAAAATGTTGAAGGATCTGATGAGAGTGGTAGTCAAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

107

Amino Acids

13.09

Weight (kDa)

9.45

Isoelectric Point (pI)

44.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 306
AcsI RAATTY 2 cut(s) 94, 168
AgsI TTSAA 1 cut(s) 295
AluBI AGCT 1 cut(s) 20
AluI AGCT 1 cut(s) 20
AlwI GGATC 1 cut(s) 306
Ama87I CYCGRG 1 cut(s) 281
ApeKI GCWGC 2 cut(s) 160, 208
ApoI RAATTY 2 cut(s) 94, 168
AsuII TTCGAA 1 cut(s) 172
AvaI CYCGRG 1 cut(s) 281
BbsI GAAGAC 1 cut(s) 206
BbvI GCAGC 2 cut(s) 147, 195
BccI CCATC 1 cut(s) 76
BclI TGATCA 1 cut(s) 222
BisI GCNGC 2 cut(s) 161, 209
BlsI GCNGC 2 cut(s) 162, 210
BmeT110I CYCGRG 1 cut(s) 281
BpiI GAAGAC 1 cut(s) 206
Bpu14I TTCGAA 1 cut(s) 172
BpuEI CTTGAG 1 cut(s) 55
BseGI GGATG 1 cut(s) 244
BseXI GCAGC 2 cut(s) 147, 195
BseYI CCCAGC 1 cut(s) 16
BsiHKCI CYCGRG 1 cut(s) 281
BsoBI CYCGRG 1 cut(s) 281
Bsp119I TTCGAA 1 cut(s) 172
Bsp143I GATC 4 cut(s) 62, 222, 253, 298
BspPI GGATC 1 cut(s) 306
BspT104I TTCGAA 1 cut(s) 172
BssMI GATC 4 cut(s) 62, 222, 253, 298
Bst6I CTCTTC 1 cut(s) 150
BstBI TTCGAA 1 cut(s) 172
BstC8I GCNNGC 1 cut(s) 22
BstF5I GGATG 1 cut(s) 244
BstKTI GATC 4 cut(s) 65, 225, 256, 301
BstMBI GATC 4 cut(s) 62, 222, 253, 298
BstV1I GCAGC 2 cut(s) 147, 195
BstV2I GAAGAC 1 cut(s) 206
BstX2I RGATCY 1 cut(s) 298
BstYI RGATCY 1 cut(s) 298
BtsCI GGATG 1 cut(s) 244
Cac8I GCNNGC 1 cut(s) 22
CviAII CATG 1 cut(s) 99
CviJI RGCY 3 cut(s) 20, 103, 160
CviKI_1 RGCY 3 cut(s) 20, 103, 160
DpnI GATC 4 cut(s) 64, 224, 255, 300
DpnII GATC 4 cut(s) 62, 222, 253, 298
DraI TTTAAA 2 cut(s) 186, 267
Eam1104I CTCTTC 1 cut(s) 150
EarI CTCTTC 1 cut(s) 150
Eco88I CYCGRG 1 cut(s) 281
EcoRI GAATTC 1 cut(s) 168
FaeI CATG 1 cut(s) 102
FaiI YATR 6 cut(s) 6, 100, 151, 155, 157, 248
FalI AAGNNNNNCTT 2 cut(s) 120, 152
FatI CATG 1 cut(s) 98
FbaI TGATCA 1 cut(s) 222
Fnu4HI GCNGC 2 cut(s) 161, 209
FokI GGATG 1 cut(s) 251
Fsp4HI GCNGC 2 cut(s) 161, 209
GluI GCNGC 2 cut(s) 161, 209
GsaI CCCAGC 1 cut(s) 20
Hin1II CATG 1 cut(s) 102
HinfI GANTC 2 cut(s) 140, 202
Hpy166II GTNNAC 1 cut(s) 278
Hpy188I TCNGA 3 cut(s) 49, 71, 303
Hpy188III TCNNGA 3 cut(s) 34, 137, 236
Hpy8I GTNNAC 1 cut(s) 278
HpyAV CCTTC 1 cut(s) 289
Hsp92II CATG 1 cut(s) 102
Ksp22I TGATCA 1 cut(s) 222
Kzo9I GATC 4 cut(s) 62, 222, 253, 298
LpnPI CCDG 2 cut(s) 30, 221
Lsp1109I GCAGC 2 cut(s) 147, 195
MalI GATC 4 cut(s) 64, 224, 255, 300
MboI GATC 4 cut(s) 62, 222, 253, 298
MboII GAAGA 2 cut(s) 137, 211
MflI RGATCY 1 cut(s) 298
MluCI AATT 4 cut(s) 94, 106, 168, 243
MlyI GAGTC 1 cut(s) 196
MnlI CCTC 3 cut(s) 69, 158, 172
MseI TTAA 3 cut(s) 9, 185, 266
NdeII GATC 4 cut(s) 62, 222, 253, 298
NlaIII CATG 1 cut(s) 102
NspV TTCGAA 1 cut(s) 172
PfeI GAWTC 1 cut(s) 140
PkrI GCNGC 2 cut(s) 162, 210
PleI GAGTC 1 cut(s) 196
PpsI GAGTC 1 cut(s) 196
PspFI CCCAGC 1 cut(s) 16
PsuI RGATCY 1 cut(s) 298
SaqAI TTAA 3 cut(s) 9, 185, 266
SatI GCNGC 2 cut(s) 161, 209
Sau3AI GATC 4 cut(s) 62, 222, 253, 298
SchI GAGTC 1 cut(s) 196
SetI ASST 2 cut(s) 22, 193
SfuI TTCGAA 1 cut(s) 172
SmlI CTYRAG 1 cut(s) 34
SmoI CTYRAG 1 cut(s) 34
Sse9I AATT 4 cut(s) 94, 106, 168, 243
TaqI TCGA 2 cut(s) 172, 256
TasI AATT 4 cut(s) 94, 106, 168, 243
TfiI GAWTC 1 cut(s) 140
Tru1I TTAA 3 cut(s) 9, 185, 266
Tru9I TTAA 3 cut(s) 9, 185, 266
TseI GCWGC 2 cut(s) 160, 208
TspDTI ATGAA 1 cut(s) 87
XapI RAATTY 2 cut(s) 94, 168
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.