Rh6DG161900

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
Physical Location & Seq
Forward (+)
24333224 .. 24333562
339 bp
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UTR
Exon/CDS
Intron
Rh6DG161900.1

Sequence Viewer

Length: 339 bp
ATGGTCAGAAAAAACTCCACCAACCTTATTCTTTCTGTCATTTTCTTGTTCCTTTCTTCATGGATTTGCTTGGCCATGGCACAAAACAAGGCCAGTATCCCAGTTAATGTGGGTGTTGTTCTTAACCTTAATAGACTATATGGAAAGATTTGGTTGAGCTGCATCAAAATTGCCCTCTCAGATTTCTATGCTTCTCATGCTCACTACAAGACTAGGCTGGTCTTGAACATTCGGAACTCCAAGGAAAATGTTGTTGGCGCAGCTGCTGTAGGTTCTCCTCCCTATCATTGGCATTGTTTGGCTCTCATTTTGGGTTCAAACAGACATTTCACTACATAA

Protein Analysis

112

Amino Acids

12.5

Weight (kDa)

10.03

Isoelectric Point (pI)

40.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 72
AfiI CCNNNNNNNGG 1 cut(s) 288
AgsI TTSAA 2 cut(s) 226, 318
AjuI GAANNNNNNNTTGG 2 cut(s) 237, 269
AluBI AGCT 2 cut(s) 159, 263
AluI AGCT 2 cut(s) 159, 263
AlwNI CAGNNNCTG 1 cut(s) 266
AoxI GGCC 2 cut(s) 72, 90
ApeKI GCWGC 3 cut(s) 159, 260, 263
AspLEI GCGC 1 cut(s) 260
BalI TGGCCA 1 cut(s) 74
BbvI GCAGC 3 cut(s) 146, 250, 272
BciVI GTATCC 1 cut(s) 107
BfaI CTAG 1 cut(s) 213
BfmI CTRYAG 1 cut(s) 267
BfuI GTATCC 1 cut(s) 107
BisI GCNGC 3 cut(s) 160, 261, 264
BlsI GCNGC 3 cut(s) 161, 262, 265
BmrI ACTGGG 1 cut(s) 95
BmsI GCATC 1 cut(s) 171
BmuI ACTGGG 1 cut(s) 95
BsaJI CCNNGG 2 cut(s) 75, 240
Bsc4I CCNNNNNNNGG 1 cut(s) 288
Bse1I ACTGG 2 cut(s) 93, 101
BseDI CCNNGG 2 cut(s) 75, 240
BseLI CCNNNNNNNGG 1 cut(s) 288
BseMII CTCAG 1 cut(s) 192
BseNI ACTGG 2 cut(s) 93, 101
BseRI GAGGAG 1 cut(s) 267
BseXI GCAGC 3 cut(s) 146, 250, 272
BshFI GGCC 2 cut(s) 74, 92
BslI CCNNNNNNNGG 1 cut(s) 288
BsnI GGCC 2 cut(s) 74, 92
Bsp19I CCATGG 1 cut(s) 75
BspANI GGCC 2 cut(s) 74, 92
BspCNI CTCAG 1 cut(s) 191
BsrI ACTGG 2 cut(s) 93, 101
BssECI CCNNGG 2 cut(s) 75, 240
BssT1I CCWWGG 2 cut(s) 75, 240
BstDEI CTNAG 1 cut(s) 178
BstDSI CCRYGG 1 cut(s) 75
BstHHI GCGC 1 cut(s) 260
BstMWI GCNNNNNNNGC 1 cut(s) 197
BstSFI CTRYAG 1 cut(s) 267
BstV1I GCAGC 3 cut(s) 146, 250, 272
BsuI GTATCC 1 cut(s) 107
BsuRI GGCC 2 cut(s) 74, 92
BtgI CCRYGG 1 cut(s) 75
CaiI CAGNNNCTG 1 cut(s) 266
CfoI GCGC 1 cut(s) 260
CviAII CATG 3 cut(s) 60, 76, 197
CviJI RGCY 6 cut(s) 74, 92, 159, 217, 263, 302
CviKI_1 RGCY 6 cut(s) 74, 92, 159, 217, 263, 302
DdeI CTNAG 1 cut(s) 178
EaeI YGGCCR 1 cut(s) 72
Eco130I CCWWGG 2 cut(s) 75, 240
EcoT14I CCWWGG 2 cut(s) 75, 240
ErhI CCWWGG 2 cut(s) 75, 240
FaeI CATG 3 cut(s) 63, 79, 200
FaiI YATR 7 cut(s) 61, 77, 139, 141, 189, 198, 337
FatI CATG 3 cut(s) 59, 75, 196
Fnu4HI GCNGC 3 cut(s) 160, 261, 264
Fsp4HI GCNGC 3 cut(s) 160, 261, 264
FspBI CTAG 1 cut(s) 213
GlaI GCGC 1 cut(s) 259
GluI GCNGC 3 cut(s) 160, 261, 264
HaeIII GGCC 2 cut(s) 74, 92
HhaI GCGC 1 cut(s) 260
Hin1II CATG 3 cut(s) 63, 79, 200
Hin6I GCGC 1 cut(s) 258
HinP1I GCGC 1 cut(s) 258
Hpy188I TCNGA 3 cut(s) 8, 181, 234
Hpy188III TCNNGA 1 cut(s) 223
HpyCH4V TGCA 1 cut(s) 162
HpyF10VI GCNNNNNNNGC 1 cut(s) 197
HpyF3I CTNAG 1 cut(s) 178
Hsp92II CATG 3 cut(s) 63, 79, 200
HspAI GCGC 1 cut(s) 258
LpnPI CCDG 3 cut(s) 106, 114, 203
Lsp1109I GCAGC 3 cut(s) 146, 250, 272
LweI GCATC 1 cut(s) 171
MaeI CTAG 1 cut(s) 213
MboII GAAGA 1 cut(s) 48
MlsI TGGCCA 1 cut(s) 74
MluCI AATT 1 cut(s) 168
MluNI TGGCCA 1 cut(s) 74
MnlI CCTC 2 cut(s) 185, 288
Mox20I TGGCCA 1 cut(s) 74
MscI TGGCCA 1 cut(s) 74
MseI TTAA 3 cut(s) 105, 123, 129
Msp20I TGGCCA 1 cut(s) 74
MspA1I CMGCKG 1 cut(s) 263
MwoI GCNNNNNNNGC 1 cut(s) 197
NcoI CCATGG 1 cut(s) 75
NlaIII CATG 3 cut(s) 63, 79, 200
PkrI GCNGC 3 cut(s) 161, 262, 265
PstNI CAGNNNCTG 1 cut(s) 266
PvuII CAGCTG 1 cut(s) 263
SaqAI TTAA 3 cut(s) 105, 123, 129
SatI GCNGC 3 cut(s) 160, 261, 264
SetI ASST 5 cut(s) 27, 129, 161, 265, 274
SfaNI GCATC 1 cut(s) 171
SfcI CTRYAG 1 cut(s) 267
Sse9I AATT 1 cut(s) 168
SspMI CTAG 1 cut(s) 213
StyI CCWWGG 2 cut(s) 75, 240
TasI AATT 1 cut(s) 168
Tru1I TTAA 3 cut(s) 105, 123, 129
Tru9I TTAA 3 cut(s) 105, 123, 129
TseI GCWGC 3 cut(s) 159, 260, 263
TspDTI ATGAA 1 cut(s) 48
XspI CTAG 1 cut(s) 213
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.