AT1G53420

leucine-rich repeat receptor-like serine threonine-protein kinase At3g14840

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
19926626 .. 19931494
4869 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G53420.1

Sequence Viewer

Length: 2862 bp
ATGTCGTTAAATCGGTTTCTCTTCACTTCCTTCTCGTTCTTTCTCTTCTTCATCGTCCATTTCGCATCGTCTGCAACTTTGCCAACACAAGAAGGGGAGGCTTTTAAAGTTGTACTAACCACATTGAAAAAGACGAATATTGATTTAAATGTGGATCCATGCGAAGTCTCATCTACTGGAAATGAATGGTCAACCATCAGCAGAAATTTGAAGAGAGAAAATCTTCAAGGGTCTCTTCCAAAAGAGTTAGTGGGACTTCCTTTACTGCAAGAGATTGATCTCTCAAGAAACTATCTCAATGGTTCCATCCCTCCTGAATGGGGAGTCTTGCCACTTGTCAACATTTGGCTTCTCGGAAACCGATTAACAGGTCCAATCCCTAAGGAGTTTGGAAACATTACAACTCTTACTAGCCTTGTCTTGGAAGCCAATCAACTTTCAGGAGAATTACCTCTTGAGCTAGGGAATCTACCAAACATTCAACAAATGATTCTTAGCTCGAATAACTTTAATGGTGAAATTCCATCTACATTTGCAAAACTAACCACCTTGAGAGATTTTCGTGTAAGTGACAACCAGTTGTCAGGAACAATTCCAGATTTCATCCAAAAATGGACTAAGCTTGAGCGACTGTTTATTCAAGCAAGTGGTTTAGTTGGACCAATTCCCATTGCCATTGCTTCTCTCGTAGAGTTAAAAGACTTGAGAATCAGCGATTTGAATGGACCCGAATCTCCATTTCCACAGTTAAGGAACATAAAAAAGATGGAGACATTAATTCTTAGGAACTGCAATCTCACAGGAGACTTACCTGATTATCTTGGAAAGATTACCTCCTTCAAATTCTTAGATCTTAGCTTCAATAAATTAAGTGGAGCCATCCCTAACACTTATATTAATCTTAGAGACGGAGGTTACATATATTTTACAGGAAACATGTTAAACGGGTCGGTTCCAGATTGGATGGTAAATAAAGGATATAAAATTGATCTTAGTTACAACAATTTCTCAGTAGATCCAACCAATGCAGTATGCAAGTACAATAATGTACTTTCATGCATGAGAAACTACCAATGTCCTAAAACTTTCAATGCTCTTCATATAAACTGTGGTGGGGATGAAATGTCTATCAATGGGACAATATATGAATCTGATAAGTACGATAGACTGGAGAGTTGGTACGAAAGTCGAAATGGATGGTTCTCAAACAACGTAGGAGTCTTCGTAGACGATAAACATGTTCCCGAGAGAGTAACCATCGAGTCTAACTCATCCGAGCTCAATGTGGTTGATTTTGGTCTGTATACGCAAGCTCGCATATCAGCTATCTCACTCACTTACTATGCATTGTGTTTAGAAAATGGAAATTACAACGTTAATCTCCATTTCGCCGAGATTATGTTCAATGGTAACAACAATTATCAAAGCTTGGGTAGACGGTTTTTCGACATATACATTCAGAGGAAGCTCGAGGTTAAAGATTTCAATATCGCCAAGGAGGCAAAAGATGTTGGAAACGTTGTTATTAAGACATTTCCGGTCGAGATAAAAGATGGAAAGTTGGAGATACGATTGTATTGGGCCGGGAGAGGAACTACAGTCATTCCCAAAGAACGTGTTTATGGTCCTCTCATATCAGCTATATCAGTGGATTCAAGTGTTAATCCATCTCCTAGAAATGGTATGAGTACTGGTACTCTCCATACATTGGTAGTGATCTTATCCATTTTCATTGTGTTTCTCGTATTTGGAACTCTATGGAAAAAAGGTTACTTGAGATCGAAAAGCCAAATGGAAAAAGATTTCAAAAGTTTGGAACTCATGATTGCTTCTTTCTCGTTGAGGCAAATCAAAATCGCTACAAACAACTTTGATTCTGCAAATAGGATTGGAGAAGGCGGCTTTGGTCCTGTATACAAGGGAAAGTTATTTGATGGAACAATAATCGCAGTGAAACAACTTTCGACAGGATCAAAACAAGGGAACCGCGAGTTCTTGAACGAGATTGGCATGATTTCAGCTCTGCACCACCCTAATCTGGTTAAACTATATGGATGTTGCGTTGAAGGAGGCCAACTTTTATTAGTCTATGAGTTTGTAGAAAACAACAGTCTCGCTCGAGCATTGTTTGGTCCTCAAGAAACTCAGTTGAGATTGGACTGGCCTACAAGACGGAAGATCTGTATCGGAGTGGCGAGAGGGCTAGCATATCTACACGAAGAATCGAGGCTAAAGATTGTACACAGAGACATCAAAGCCACTAATGTGTTGCTAGACAAACAACTGAATCCGAAAATATCAGACTTTGGTCTTGCCAAGCTTGATGAAGAGGACAGCACTCACATTAGCACTCGAATCGCTGGAACATTTGGTTACATGGCTCCGGAGTACGCCATGAGAGGCCATTTGACAGATAAAGCTGACGTTTACAGCTTTGGTATAGTAGCTCTAGAGATTGTTCATGGAAGAAGCAATAAAATAGAACGATCCAAAAACAATACCTTCTATCTTATTGACTGGGTGGAGGTTTTGAGAGAGAAGAATAATCTGTTGGAACTGGTGGATCCAAGACTAGGATCAGAATATAACAGAGAAGAAGCAATGACCATGATCCAAATTGCGATAATGTGTACAAGCTCAGAACCTTGTGAGAGACCGTCAATGTCAGAAGTGGTGAAGATGTTAGAAGGTAAGAAGATGGTGGAGGTGGAGAAACTTGAAGAAGCTTCAGTCCATAGAGAAACAAAGAGACTTGAAAACATGAACACGATGAAGAAGTACTACGAAATGATAGGGCAAGAGATAAGTACAAGCATGAGCATGATCATGAGTGATCGTAGTGAATCATCAGCAGATCATTAG

Protein Analysis

953

Amino Acids

107.49

Weight (kDa)

6.46

Isoelectric Point (pI)

33.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 128 - 237 1.4e-06 Leucine-rich repeat region
Malectin PF11721 365 - 548 6.7e-46 Malectin domain
Pkinase PF00069 626 - 893 1.2e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 628 - 895 6.8e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000292)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53420 AT3G14840
fragaria_vesca FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17850 FvH4_3g17850 FvH4_3g17850 FvH4_3g17850 FvH4_3g17851
malus_domestica MD03G1246600.v1.1 MD06G1045200.v1.1 MD06G1045400.v1.1 MD11G1267800.v1.1 MD11G1267900.v1.1 MD11G1268100.v1.1 MD11G1268300.v1.1 MD11G1268500.v1.1 MD11G1268600.v1.1
prunus_persica Prupe.4G157700_v2.0.a1 Prupe.4G157700_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157900_v2.0.a1 Prupe.4G157900_v2.0.a1 Prupe.4G157900_v2.0.a1
pyrus_communis pycom03g19540 pycom11g23600 pycom11g23630 pycom11g23690 pycom11g23720 pycom11g23730 pycom11g23740 pycom11g23750
rosa_chinensis RchiOBHm_Chr0c40g0503411 RchiOBHm_Chr0c40g0503421 RchiOBHm_Chr5g0029631 RchiOBHm_Chr5g0029661 RchiOBHm_Chr5g0029701 RchiOBHm_Chr5g0029741 RchiOBHm_Chr5g0029771 RchiOBHm_Chr5g0029781 RchiOBHm_Chr5g0029811 RchiOBHm_Chr5g0029851 RchiOBHm_Chr5g0029871 RchiOBHm_Chr5g0029891 RchiOBHm_Chr7g0222221
rosa_laevigata RLG00000017380 RLG00000032873 RLG00000033188 RLG00000033190 RLG00000033192 RLG00000033193 RLG00000033194 RLG00000033196 RLG00000033199 RLG00000033238
rosa_multiflora Rmu_co8359987.1_g000001 Rmu_co8444909.1_g000001 Rmu_sc0001608.1_g000007 Rmu_sc0001608.1_g000009 Rmu_sc0001608.1_g000013 Rmu_sc0001608.1_g000018 Rmu_sc0001608.1_g000023 Rmu_sc0001608.1_g000040 Rmu_sc0003238.1_g000016 Rmu_sc0003368.1_g000026 Rmu_sc0003368.1_g000034 Rmu_sc0003368.1_g000043 Rmu_sc0003368.1_g000047 Rmu_sc0003368.1_g000052 Rmu_sc0003368.1_g000054 Rmu_sc0004963.1_g000001
rosa_roxburghii Rroxscaffold_1G00050080 Rroxscaffold_1G00050090 Rroxscaffold_1G00050110 Rroxscaffold_1G00050120 Rroxscaffold_1G00050180 Rroxscaffold_1G00050190 Rroxscaffold_1G00050220 Rroxscaffold_1G00050270 Rroxscaffold_1G00050300
rosa_rugosa Rorug04G0065200 Rorug05G0114900 Rorug05G0115000 Rorug05G0115100 Rorug05G0120100 Rorug05G0238900
rosa_samantha Rh5AG207800 Rh5AG208000 Rh5AG208300 Rh5AG208400 Rh5AG208800 Rh5AG294900 Rh5AG295000 Rh5AG295400 Rh5CG230400 Rh7AG347800
rosa_wichuraiana Rw0G005370 Rw0G012460 Rw0G019060 Rw5G018910 Rw5G018920 Rw5G018930 Rw5G018940 Rw5G018960 Rw5G018970 Rw5G018980 Rw5G018990 Rw5G019000 Rw7G029840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1708
AccI GTMKAC 4 cut(s) 1227, 1304, 1435, 1914
AccII CGCG 1 cut(s) 1989
AccIII TCCGGA 1 cut(s) 2383
AciI CCGC 2 cut(s) 1899, 1987
AclI AACGTT 2 cut(s) 1374, 1518
AclWI GGATC 9 cut(s) 149, 162, 1010, 1978, 2481, 2558, 2571, 2584, 2605
AcsI RAATTY 3 cut(s) 205, 519, 842
AcuI CTGAAG 1 cut(s) 2712
AfiI CCNNNNNNNGG 6 cut(s) 320, 421, 1679, 1708, 2038, 2573
AflIII ACRYGT 3 cut(s) 936, 1237, 1615
AjuI GAANNNNNNNTTGG 4 cut(s) 1887, 1919, 2534, 2566
AleI CACNNNNGTG 1 cut(s) 2264
Alw21I GWGCWC 1 cut(s) 1281
Alw26I GTCTC 9 cut(s) 172, 237, 764, 798, 900, 2117, 2241, 2647, 2743
AlwI GGATC 9 cut(s) 149, 162, 1010, 1978, 2481, 2558, 2571, 2584, 2605
Ama87I CYCGRG 3 cut(s) 1244, 1469, 2118
Aor13HI TCCGGA 1 cut(s) 2383
AoxI GGCC 4 cut(s) 1581, 2071, 2162, 2401
ApoI RAATTY 3 cut(s) 205, 519, 842
AseI ATTAAT 2 cut(s) 776, 897
Asp700I GAANNNNTTC 1 cut(s) 222
AspS9I GGNCC 7 cut(s) 371, 659, 725, 1581, 1625, 1907, 2132
AsuC2I CCSGG 1 cut(s) 1585
AsuHPI GGTGA 2 cut(s) 527, 2686
AsuNHI GCTAGC 1 cut(s) 2203
AvaI CYCGRG 3 cut(s) 1244, 1469, 2118
AvaII GGWCC 6 cut(s) 371, 659, 725, 1625, 1907, 2132
AxyI CCTNAGG 1 cut(s) 381
BaeI ACNNNNGTAYC 4 cut(s) 1171, 1204, 1559, 1592
BamHI GGATCC 2 cut(s) 154, 2563
BanII GRGCYC 1 cut(s) 1281
BarI GAAGNNNNNNTAC 2 cut(s) 2765, 2797
BbsI GAAGAC 1 cut(s) 1213
Bbv12I GWGCWC 1 cut(s) 1281
BcgI CGANNNNNNTGC 2 cut(s) 2338, 2372
BclI TGATCA 1 cut(s) 2823
BcnI CCSGG 1 cut(s) 1585
BcoDI GTCTC 9 cut(s) 172, 237, 764, 798, 900, 2117, 2241, 2647, 2743
BfaI CTAG 7 cut(s) 411, 461, 1674, 2204, 2273, 2450, 2573
BfmI CTRYAG 1 cut(s) 1596
BglI GCCNNNNNGGC 1 cut(s) 1499
BglII AGATCT 2 cut(s) 850, 2178
BisI GCNGC 1 cut(s) 1900
BlsI GCNGC 1 cut(s) 1901
BmcAI AGTACT 2 cut(s) 1690, 2780
Bme1390I CCNGG 1 cut(s) 1585
Bme18I GGWCC 6 cut(s) 371, 659, 725, 1625, 1907, 2132
BmeT110I CYCGRG 3 cut(s) 1244, 1469, 2118
BmgT120I GGNCC 7 cut(s) 371, 659, 725, 1581, 1625, 1907, 2132
BmiI GGNNCC 8 cut(s) 156, 304, 727, 877, 954, 1985, 2382, 2565
BmrFI CCNGG 1 cut(s) 1585
BmrI ACTGGG 1 cut(s) 2527
BmsI GCATC 1 cut(s) 74
BmtI GCTAGC 1 cut(s) 2207
BmuI ACTGGG 1 cut(s) 2527
BoxI GACNNNNGTC 1 cut(s) 2307
BpiI GAAGAC 1 cut(s) 1213
BplI GAGNNNNNCTC 2 cut(s) 1253, 1285
BpmI CTGGAG 1 cut(s) 1190
BpuEI CTTGAG 7 cut(s) 268, 476, 571, 644, 724, 1795, 2121
BpuMI CCSGG 1 cut(s) 1585
BsaBI GATNNNNATC 1 cut(s) 2183
BsaI GGTCTC 2 cut(s) 237, 2647
BsaJI CCNNGG 1 cut(s) 1494
BsaWI WCCGGW 2 cut(s) 1537, 2383
BsaXI ACNNNNNCTCC 4 cut(s) 1163, 1193, 1209, 1239
Bsc4I CCNNNNNNNGG 6 cut(s) 320, 421, 1679, 1708, 2038, 2573
Bse1I ACTGG 7 cut(s) 181, 577, 1173, 1696, 2165, 2522, 2562
Bse21I CCTNAGG 1 cut(s) 381
Bse3DI GCAATG 3 cut(s) 669, 675, 2607
Bse8I GATNNNNATC 1 cut(s) 2183
BseAI TCCGGA 1 cut(s) 2383
BseDI CCNNGG 1 cut(s) 1494
BseGI GGATG 8 cut(s) 306, 603, 879, 969, 1123, 1202, 1271, 2060
BseJI GATNNNNATC 1 cut(s) 2183
BseLI CCNNNNNNNGG 6 cut(s) 320, 421, 1679, 1708, 2038, 2573
BseMI GCAATG 3 cut(s) 669, 675, 2607
BseMII CTCAG 3 cut(s) 1023, 2159, 2652
BseNI ACTGG 7 cut(s) 181, 577, 1173, 1696, 2165, 2522, 2562
BsgI GTGCAG 1 cut(s) 2009
Bsh1236I CGCG 1 cut(s) 1989
Bsh1285I CGRYCG 1 cut(s) 1542
BshFI GGCC 4 cut(s) 1583, 2073, 2164, 2403
BsiEI CGRYCG 1 cut(s) 1542
BsiHKAI GWGCWC 1 cut(s) 1281
BsiHKCI CYCGRG 3 cut(s) 1244, 1469, 2118
BsiSI CCGG 3 cut(s) 1538, 1584, 2384
BslFI GGGAC 2 cut(s) 267, 1150
BslI CCNNNNNNNGG 6 cut(s) 320, 421, 1679, 1708, 2038, 2573
BsmAI GTCTC 9 cut(s) 172, 237, 764, 798, 900, 2117, 2241, 2647, 2743
BsmBI CGTCTC 1 cut(s) 900
BsmFI GGGAC 2 cut(s) 267, 1150
BsnI GGCC 4 cut(s) 1583, 2073, 2164, 2403
Bso31I GGTCTC 2 cut(s) 237, 2647
BsoBI CYCGRG 3 cut(s) 1244, 1469, 2118
Bsp1286I GDGCHC 1 cut(s) 1281
Bsp13I TCCGGA 1 cut(s) 2383
Bsp1407I TGTACA 2 cut(s) 2239, 2630
BspACI CCGC 2 cut(s) 1899, 1987
BspANI GGCC 4 cut(s) 1583, 2073, 2164, 2403
BspCNI CTCAG 3 cut(s) 1022, 2158, 2651
BspEI TCCGGA 1 cut(s) 2383
BspFNI CGCG 1 cut(s) 1989
BspHI TCATGA 2 cut(s) 1821, 2826
BspLI GGNNCC 8 cut(s) 156, 304, 727, 877, 954, 1985, 2382, 2565
BspOI GCTAGC 1 cut(s) 2207
BspPI GGATC 9 cut(s) 149, 162, 1010, 1978, 2481, 2558, 2571, 2584, 2605
BspQI GCTCTTC 1 cut(s) 1101
BspTNI GGTCTC 2 cut(s) 237, 2647
BsrDI GCAATG 3 cut(s) 669, 675, 2607
BsrGI TGTACA 2 cut(s) 2239, 2630
BsrI ACTGG 7 cut(s) 181, 577, 1173, 1696, 2165, 2522, 2562
BssECI CCNNGG 1 cut(s) 1494
BssNAI GTATAC 2 cut(s) 1305, 1915
BssT1I CCWWGG 1 cut(s) 1494
Bst1107I GTATAC 2 cut(s) 1305, 1915
Bst4CI ACNGT 7 cut(s) 633, 747, 1109, 1440, 1600, 2111, 2658
Bst6I CTCTTC 6 cut(s) 26, 50, 206, 240, 1101, 2322
BstAPI GCANNNNNTGC 1 cut(s) 71
BstAUI TGTACA 2 cut(s) 2239, 2630
BstC8I GCNNGC 3 cut(s) 1311, 1315, 2205
BstF5I GGATG 8 cut(s) 306, 603, 879, 969, 1123, 1202, 1271, 2060
BstFNI CGCG 1 cut(s) 1989
BstMAI GTCTC 9 cut(s) 172, 237, 764, 798, 900, 2117, 2241, 2647, 2743
BstMCI CGRYCG 1 cut(s) 1542
BstMWI GCNNNNNNNGC 2 cut(s) 71, 1499
BstNSI RCATGY 2 cut(s) 940, 1241
BstPAI GACNNNNGTC 1 cut(s) 2307
BstSCI CCNGG 1 cut(s) 1583
BstSFI CTRYAG 1 cut(s) 1596
BstUI CGCG 1 cut(s) 1989
BstV2I GAAGAC 1 cut(s) 1213
BstX2I RGATCY 5 cut(s) 154, 850, 1015, 2178, 2563
BstYI RGATCY 5 cut(s) 154, 850, 1015, 2178, 2563
BstZ17I GTATAC 2 cut(s) 1305, 1915
Bsu36I CCTNAGG 1 cut(s) 381
BsuRI GGCC 4 cut(s) 1583, 2073, 2164, 2403
BtsCI GGATG 8 cut(s) 306, 603, 879, 969, 1123, 1202, 1271, 2060
BtsI GCAGTG 1 cut(s) 1956
BtsIMutI CAGTG 2 cut(s) 1653, 1956
Cac8I GCNNGC 3 cut(s) 1311, 1315, 2205
CciI TCATGA 2 cut(s) 1821, 2826
Cfr13I GGNCC 7 cut(s) 371, 659, 725, 1581, 1625, 1907, 2132
DraI TTTAAA 2 cut(s) 106, 147
Eam1104I CTCTTC 6 cut(s) 26, 50, 206, 240, 1101, 2322
EarI CTCTTC 6 cut(s) 26, 50, 206, 240, 1101, 2322
Ecl136II GAGCTC 1 cut(s) 1279
Eco130I CCWWGG 1 cut(s) 1494
Eco24I GRGCYC 1 cut(s) 1281
Eco31I GGTCTC 2 cut(s) 237, 2647
Eco47I GGWCC 6 cut(s) 371, 659, 725, 1625, 1907, 2132
Eco53kI GAGCTC 1 cut(s) 1279
Eco57I CTGAAG 1 cut(s) 2712
Eco81I CCTNAGG 1 cut(s) 381
Eco88I CYCGRG 3 cut(s) 1244, 1469, 2118
EcoICRI GAGCTC 1 cut(s) 1279
EcoT14I CCWWGG 1 cut(s) 1494
EcoT22I ATGCAT 2 cut(s) 1061, 1348
EcoT38I GRGCYC 1 cut(s) 1281
ErhI CCWWGG 1 cut(s) 1494
Esp3I CGTCTC 1 cut(s) 900
FalI AAGNNNNNCTT 2 cut(s) 219, 251
FaqI GGGAC 2 cut(s) 267, 1150
FbaI TGATCA 1 cut(s) 2823
FblI GTMKAC 4 cut(s) 1227, 1304, 1435, 1914
Fnu4HI GCNGC 1 cut(s) 1900
FokI GGATG 8 cut(s) 293, 590, 866, 976, 1130, 1209, 1258, 2067
FriOI GRGCYC 1 cut(s) 1281
Fsp4HI GCNGC 1 cut(s) 1900
FspBI CTAG 7 cut(s) 411, 461, 1674, 2204, 2273, 2450, 2573
GluI GCNGC 1 cut(s) 1900
GsuI CTGGAG 1 cut(s) 1190
HaeIII GGCC 4 cut(s) 1583, 2073, 2164, 2403
HapII CCGG 3 cut(s) 1538, 1584, 2384
HincII GTYRAC 2 cut(s) 192, 340
HindII GTYRAC 2 cut(s) 192, 340
HindIII AAGCTT 4 cut(s) 620, 1426, 2318, 2724
HpaII CCGG 3 cut(s) 1538, 1584, 2384
HphI GGTGA 2 cut(s) 527, 2686
Hpy166II GTNNAC 9 cut(s) 192, 340, 1228, 1305, 1436, 1915, 2242, 2428, 2631
Hpy8I GTNNAC 9 cut(s) 192, 340, 1228, 1305, 1436, 1915, 2242, 2428, 2631
HpyAV CCTTC 7 cut(s) 40, 86, 847, 1889, 2060, 2512, 2681
HpyCH4III ACNGT 7 cut(s) 633, 747, 1109, 1440, 1600, 2111, 2658
HpyCH4IV ACGT 5 cut(s) 1212, 1374, 1518, 1615, 2424
HpyF10VI GCNNNNNNNGC 2 cut(s) 71, 1499
HpySE526I ACGT 5 cut(s) 1212, 1374, 1518, 1615, 2424
Kpn2I TCCGGA 1 cut(s) 2383
Ksp22I TGATCA 1 cut(s) 2823
LguI GCTCTTC 1 cut(s) 1101
LmnI GCTCC 2 cut(s) 875, 2386
LweI GCATC 1 cut(s) 74
MaeI CTAG 7 cut(s) 411, 461, 1674, 2204, 2273, 2450, 2573
MaeII ACGT 5 cut(s) 1212, 1374, 1518, 1615, 2424
MaeIII GTNAC 7 cut(s) 569, 914, 995, 1252, 1409, 1769, 2372
MflI RGATCY 5 cut(s) 154, 850, 1015, 2178, 2563
MhlI GDGCHC 1 cut(s) 1281
MlyI GAGTC 3 cut(s) 333, 1227, 1271
MmeI TCCRAC 5 cut(s) 637, 1043, 1492, 1542, 2532
Mph1103I ATGCAT 2 cut(s) 1061, 1348
MroI TCCGGA 1 cut(s) 2383
MroXI GAANNNNTTC 1 cut(s) 222
MslI CAYNNNNRTG 3 cut(s) 2264, 2819, 2825
MspI CCGG 3 cut(s) 1538, 1584, 2384
MspR9I CCNGG 1 cut(s) 1585
MvnI CGCG 1 cut(s) 1989
MwoI GCNNNNNNNGC 2 cut(s) 71, 1499
NciI CCSGG 1 cut(s) 1585
NheI GCTAGC 1 cut(s) 2203
NlaIV GGNNCC 8 cut(s) 156, 304, 727, 877, 954, 1985, 2382, 2565
NmeAIII GCCGAG 1 cut(s) 1417
NmuCI GTSAC 1 cut(s) 569
NsiI ATGCAT 2 cut(s) 1061, 1348
NspI RCATGY 2 cut(s) 940, 1241
OliI CACNNNNGTG 1 cut(s) 2264
PaeR7I CTCGAG 2 cut(s) 1469, 2118
PagI TCATGA 2 cut(s) 1821, 2826
PciI ACATGT 2 cut(s) 936, 1237
PciSI GCTCTTC 1 cut(s) 1101
PdmI GAANNNNTTC 1 cut(s) 222
PflMI CCANNNNNTGG 1 cut(s) 1708
PkrI GCNGC 1 cut(s) 1901
PleI GAGTC 3 cut(s) 332, 1226, 1270
PpsI GAGTC 3 cut(s) 332, 1226, 1270
PscI ACATGT 2 cut(s) 936, 1237
PshAI GACNNNNGTC 1 cut(s) 2307
PshBI ATTAAT 2 cut(s) 776, 897
Psp124BI GAGCTC 1 cut(s) 1281
Psp1406I AACGTT 2 cut(s) 1374, 1518
PspN4I GGNNCC 8 cut(s) 156, 304, 727, 877, 954, 1985, 2382, 2565
PspPI GGNCC 7 cut(s) 371, 659, 725, 1581, 1625, 1907, 2132
PspXI VCTCGAGB 2 cut(s) 1469, 2118
PsuI RGATCY 5 cut(s) 154, 850, 1015, 2178, 2563
RseI CAYNNNNRTG 3 cut(s) 2264, 2819, 2825
SacI GAGCTC 1 cut(s) 1281
SapI GCTCTTC 1 cut(s) 1101
SatI GCNGC 1 cut(s) 1900
Sau96I GGNCC 7 cut(s) 371, 659, 725, 1581, 1625, 1907, 2132
ScaI AGTACT 2 cut(s) 1690, 2780
SchI GAGTC 3 cut(s) 333, 1227, 1271
ScrFI CCNGG 1 cut(s) 1585
SduI GDGCHC 1 cut(s) 1281
SfaNI GCATC 1 cut(s) 74
SfcI CTRYAG 1 cut(s) 1596
Sfr274I CTCGAG 2 cut(s) 1469, 2118
SinI GGWCC 6 cut(s) 371, 659, 725, 1625, 1907, 2132
SlaI CTCGAG 2 cut(s) 1469, 2118
SmiI ATTTAAAT 1 cut(s) 147
SmiMI CAYNNNNRTG 3 cut(s) 2264, 2819, 2825
SmlI CTYRAG 9 cut(s) 283, 455, 550, 623, 703, 1469, 1774, 2118, 2136
SmoI CTYRAG 9 cut(s) 283, 455, 550, 623, 703, 1469, 1774, 2118, 2136
SsiI CCGC 2 cut(s) 1899, 1987
SspI AATATT 1 cut(s) 139
SspMI CTAG 7 cut(s) 411, 461, 1674, 2204, 2273, 2450, 2573
SstI GAGCTC 1 cut(s) 1281
StyD4I CCNGG 1 cut(s) 1583
StyI CCWWGG 1 cut(s) 1494
SwaI ATTTAAAT 1 cut(s) 147
TaaI ACNGT 7 cut(s) 633, 747, 1109, 1440, 1600, 2111, 2658
TaiI ACGT 5 cut(s) 1215, 1377, 1521, 1618, 2427
TatI WGTACW 8 cut(s) 112, 1038, 1048, 1688, 2239, 2630, 2778, 2807
TauI GCSGC 1 cut(s) 1902
TscAI CASTG 2 cut(s) 1653, 1956
TseFI GTSAC 1 cut(s) 569
Tsp45I GTSAC 1 cut(s) 569
TspGWI ACGGA 2 cut(s) 924, 2188
TspRI CASTG 2 cut(s) 1653, 1956
Van91I CCANNNNNTGG 1 cut(s) 1708
VpaK11BI GGWCC 6 cut(s) 371, 659, 725, 1625, 1907, 2132
VspI ATTAAT 2 cut(s) 776, 897
XapI RAATTY 3 cut(s) 205, 519, 842
XbaI TCTAGA 1 cut(s) 2449
XceI RCATGY 2 cut(s) 940, 1241
XhoI CTCGAG 2 cut(s) 1469, 2118
XmiI GTMKAC 4 cut(s) 1227, 1304, 1435, 1914
XmnI GAANNNNTTC 1 cut(s) 222
XspI CTAG 7 cut(s) 411, 461, 1674, 2204, 2273, 2450, 2573
ZrmI AGTACT 2 cut(s) 1690, 2780
Zsp2I ATGCAT 2 cut(s) 1061, 1348
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.