MD11G1267900.v1.1

leucine-rich repeat receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
Physical Location & Seq
Forward (+)
38332224 .. 38355032
22809 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1267900.v1.1.491

Sequence Viewer

Length: 3045 bp
ATGATGAATATGTTCTTCCCTCGATTTCTTCCTCATTCTCTTTTCTTTGTAGCTTGCTTTGTAACTTTTGCCTTTGGAGCTACTCGATTGCCAAATGATGAAGTGCACACTTTGAAAGACATAGCAAAGACACTGGGGAAGACGGGCTGGAATTTCAGTGGAGACGCAGATCCATGCAGCGGCCAACTTCCATGGACTGATCCAAAAGCAACCAAAGAATCTGCGAATGCCATCAACTGTACTTGCTCCTCCACTGTCTGCCATATTACCGGAATAATTCTAAAAGCCCTAAAAGCCCAAGATTTGCAAGGAACACTCCCAGTAGAGCTGGTAAATCTCACCTATCTTCAAGAAATTGACCTCACCCGCAACTACCTGAGCGGTACCATCCCTCCAGAATGGAGCTCTCTTCCACTTCTGAACATATCCCTTCTTGGAAATCTTTTGAACGGTTCTATCCCCAAAGAGCTCGGAAACATCACCACCCTGAAGAGTTTGGACATCAGTTTCAATAACTTCTCTGGACCTCTCCCTCAGGAGCTTGGATCTTGGGTCAACATAGAAAGATTGCTGCTTTCCTCAAACAATTTTACTGGGGAGTTGCCAGAAACATTTGCAAATCTTACCAAAATAAAGGACTTTCGGGTTAGTGACAGTCACTTTTTCGGGCAGATACCTGATTTTATTGAGAACTGGACAAATCTTGAAAAACTAGTGATTCAAGCTAGCGGTTTGACAGGGCCAATTCCTTCTGGCATTTCTCTTTTGACAAACTTGACTGACTTGAGAATCACTGACTTGAGTGGACCTGAATCACCCATTCCTTCGCTGGATAAGATGAAAAACATGAAGACACTGATATTGAGGAATTGCAACCTTATTGGAAAGCTACCTCCATATCTTGCGCATATGACCGAATTGAAAACTTTAGACCTCAGCTTTAACAAGCTGACCGGAGTAATTCCAAGCAGCTTGGCTAGTCTACCAAAAGTGCAATATATATTCTTAACTGGAAACTTGCTGACTGGACCTGTACCTAATTGGCCGAAATACAAAGTTGATCTTTCATATAACAACCTCACCATAGAGGATGCAAGTTGTCCAGCCCTAAGCAACACTAACTTGTTTGCAAGCTCGTCAGAAGGCAATAGTTCGAGAACTGTTTCATGTTTCAAAACTTCAGAATGTCCAAAATATTTGTACTACTCGCTCCATATAAATTGTGGTGGGACACAATTTACTGTCCCTGGAAAGAAAGATACACTATATGAAGCTGACACATTTCTAGATGGACCTTCATCATTGTACCAGAGCACAACAAATTGGGCAGTAAGCAGCACCGGTTCCTTCATTGATGATGACCGCCCTAAGGACACCTTTATATGGCGTAATGAAACTACACTCTCTATGGCCAATCCTCTACTGTACATGAACGCACGCCTTTCTCCCATCTCTCTAACTTATTTTGGGTTTTGTCTGGGAAATGGAGACTACACTGTAAAGCTCCATTTTGCAGAGATAATGTTTAGAAATGGCAAAACATATAAAAGCTTGGGAAGGCGCATATTCAATATTTACATTCAGGGAATCCTAGTGAAGAAGGACTTCAATATCATGGATGAAGCTCGTGTGTTTGGTGATGTAGTCATAATGAACTTTACTGCTCCTGTAACTAATAATACATTGGAGATTCGTTTATATTGGGCCGGGAAAGGGACGACAGGCATCCCTGTTAGAGGAGTCTATGGTCCTCTTATTTCAGCTATTTCAGTAGACCCAAACTTTGATCCCCCGCCAAAACCTGGTGGAAGTGGCGTGCCTACAGGTGGTGTGGTTGGAATTGTGGTCGGAGGAGTCTTCATTATACTACTGATATTTGGTATTCTTTGTAAGAGAGGTCTCCCAGGACAACAAAAGACATTGGAGGATGATTTGAAGGGTGTGGGCTTGCAAACCGGTAAATTTACCTTAAAGCAACTCAAAGATGCCACAAGCAACTTTAACAAAGCCAATAAGATTGGTGAAGGTGGTTTTGGTTCAGTTTATAAGGGCGTTCTAGCAGATAACACCGTAATAGCTGTTAAGCAGCTTTCTTCCAAATCAAAGCAAGGGAATCGTGAATTTGTTAATGAGATTGGCATGATTTCTGCTCTGCAACACCCTCATCTTGTCAAGCTCCACGGATGTTGTGTTGAAGGAAATCAACTATTGCTTGTCTATGAGTACCTGGAAAATAATAGCGTCGCTCATGCTTTGTTTAGGGCAAAAGAAAGTCATTTGCAGTTGGATTGGCCAACAAGGCACAAGATTTGTATTGGTACAGCAAGAGGTTTGGCTTATCTTCATGAAGAATCAAGATTGAAGGTCGTTCATAGAGACATCAAGGCTACTAATGTTCTGCTTGATAAAAATCTTAAACCGAAAATATCTGACTTTGGATTGGCCAAGCTTAATGAAGAGGATAATACACACATTAGCACCCGTATTGCTGGAACTTATGGATACATGGCGCCCGAATATGCAATGCGGGGTTATCTGACTGATAAAGCAGATGTCTATAGTTTTGGTATTCTTGTATTGGAAATTGTTAGCGGGAGAAACAACACAACTTACCGGAAAAAGGAAGAAAGCTTTTATCTTCTTGATTGGGCACGACTTCTAAAAGATCAGGGGGATTTGATGGACCTAGTTGATCCAAGGTTGGGATCAGACTTTAATAAAGAGGAGATGATTGTTGCAATCAATGTGGCTCTCCTTTGTTGCAATGTTACTTCGACAGCTAGGCCTACCATGTCTTCGGTTGTGAGCATGCTTGAAGGAAAGGTTGTTGTTCATGAGTTGGTCTCGGATCCAAATGCCAAGAGTATTGAGATTGATGCAATGAGGAAACATTTTCAATCTAGTTTTGGAAGGGGCACGGGAGAGAAACATATAGAAATGGAGTCAACTGAAGGGCCATGGACTGCTTCGTCTGCGTCTGCTCACGATCTGTATCCCGTCCATCCTGATTCAGATTACTGGAAGAACAGAAGCGATATAACTTGA

Protein Analysis

1015

Amino Acids

111.93

Weight (kDa)

6.88

Isoelectric Point (pI)

30.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 155 - 264 6e-07 Leucine-rich repeat region
LRR_8 PF13855 282 - 341 2.3e-09 Leucine rich repeat
Malectin PF11721 403 - 589 2e-38 Malectin domain
Pkinase PF00069 667 - 935 2.2e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 670 - 876 4.9e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000292)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53420 AT3G14840
fragaria_vesca FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17850 FvH4_3g17850 FvH4_3g17850 FvH4_3g17850 FvH4_3g17851
malus_domestica MD03G1246600.v1.1 MD06G1045200.v1.1 MD06G1045400.v1.1 MD11G1267800.v1.1 MD11G1267900.v1.1 MD11G1268100.v1.1 MD11G1268300.v1.1 MD11G1268500.v1.1 MD11G1268600.v1.1
prunus_persica Prupe.4G157700_v2.0.a1 Prupe.4G157700_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157900_v2.0.a1 Prupe.4G157900_v2.0.a1 Prupe.4G157900_v2.0.a1
pyrus_communis pycom03g19540 pycom11g23600 pycom11g23630 pycom11g23690 pycom11g23720 pycom11g23730 pycom11g23740 pycom11g23750
rosa_chinensis RchiOBHm_Chr0c40g0503411 RchiOBHm_Chr0c40g0503421 RchiOBHm_Chr5g0029631 RchiOBHm_Chr5g0029661 RchiOBHm_Chr5g0029701 RchiOBHm_Chr5g0029741 RchiOBHm_Chr5g0029771 RchiOBHm_Chr5g0029781 RchiOBHm_Chr5g0029811 RchiOBHm_Chr5g0029851 RchiOBHm_Chr5g0029871 RchiOBHm_Chr5g0029891 RchiOBHm_Chr7g0222221
rosa_laevigata RLG00000017380 RLG00000032873 RLG00000033188 RLG00000033190 RLG00000033192 RLG00000033193 RLG00000033194 RLG00000033196 RLG00000033199 RLG00000033238
rosa_multiflora Rmu_co8359987.1_g000001 Rmu_co8444909.1_g000001 Rmu_sc0001608.1_g000007 Rmu_sc0001608.1_g000009 Rmu_sc0001608.1_g000013 Rmu_sc0001608.1_g000018 Rmu_sc0001608.1_g000023 Rmu_sc0001608.1_g000040 Rmu_sc0003238.1_g000016 Rmu_sc0003368.1_g000026 Rmu_sc0003368.1_g000034 Rmu_sc0003368.1_g000043 Rmu_sc0003368.1_g000047 Rmu_sc0003368.1_g000052 Rmu_sc0003368.1_g000054 Rmu_sc0004963.1_g000001
rosa_roxburghii Rroxscaffold_1G00050080 Rroxscaffold_1G00050090 Rroxscaffold_1G00050110 Rroxscaffold_1G00050120 Rroxscaffold_1G00050180 Rroxscaffold_1G00050190 Rroxscaffold_1G00050220 Rroxscaffold_1G00050270 Rroxscaffold_1G00050300
rosa_rugosa Rorug04G0065200 Rorug05G0114900 Rorug05G0115000 Rorug05G0115100 Rorug05G0120100 Rorug05G0238900
rosa_samantha Rh5AG207800 Rh5AG208000 Rh5AG208300 Rh5AG208400 Rh5AG208800 Rh5AG294900 Rh5AG295000 Rh5AG295400 Rh5CG230400 Rh7AG347800
rosa_wichuraiana Rw0G005370 Rw0G012460 Rw0G019060 Rw5G018910 Rw5G018920 Rw5G018930 Rw5G018940 Rw5G018960 Rw5G018970 Rw5G018980 Rw5G018990 Rw5G019000 Rw7G029840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2046
AasI GACNNNNNNGTC 1 cut(s) 2968
Acc16I TGCGCA 1 cut(s) 906
Acc65I GGTACC 1 cut(s) 383
AccB1I GGYRCC 2 cut(s) 383, 2509
AccB7I CCANNNNNTGG 1 cut(s) 1802
AccBSI CCGCTC 1 cut(s) 381
AccI GTMKAC 2 cut(s) 982, 1773
AciI CCGC 8 cut(s) 180, 367, 381, 729, 1363, 1793, 2527, 2592
AclWI GGATC 8 cut(s) 164, 194, 553, 1781, 2687, 2713, 2843, 2856
AcoI YGGCCR 5 cut(s) 181, 1043, 1410, 2291, 2442
AcsI RAATTY 3 cut(s) 151, 1961, 2120
AcuI CTGAAG 3 cut(s) 509, 1164, 2970
AcyI GRCGYC 1 cut(s) 2510
AfaI GTAC 8 cut(s) 241, 385, 1035, 1202, 1307, 1427, 2225, 2320
AfiI CCNNNNNNNGG 9 cut(s) 179, 1369, 1383, 1713, 1736, 1802, 1826, 2620, 2702
AgeI ACCGGT 2 cut(s) 1340, 1955
AhlI ACTAGT 1 cut(s) 712
AjnI CCWGG 4 cut(s) 1246, 1801, 1903, 2226
AjuI GAANNNNNNNTTGG 2 cut(s) 2016, 2048
Alw21I GWGCWC 4 cut(s) 108, 407, 471, 1316
Alw26I GTCTC 5 cut(s) 156, 1482, 1904, 2370, 2848
Alw44I GTGCAC 1 cut(s) 104
AlwI GGATC 8 cut(s) 164, 194, 553, 1781, 2687, 2713, 2843, 2856
AoxI GGCC 9 cut(s) 181, 740, 1043, 1410, 1704, 2291, 2442, 2783, 2954
ApaLI GTGCAC 1 cut(s) 104
ApeKI GCWGC 5 cut(s) 177, 571, 969, 1335, 2086
ApoI RAATTY 3 cut(s) 151, 1961, 2120
ArsI GACNNNNNNTTYG 2 cut(s) 1766, 1798
AsiGI ACCGGT 2 cut(s) 1340, 1955
Asp700I GAANNNNTTC 3 cut(s) 11, 1162, 1604
Asp718I GGTACC 1 cut(s) 383
AspLEI GCGC 3 cut(s) 907, 1563, 2512
AspS9I GGNCC 9 cut(s) 524, 740, 806, 1028, 1292, 1704, 1748, 2683, 2954
AsuC2I CCSGG 1 cut(s) 1708
AsuHPI GGTGA 7 cut(s) 331, 355, 472, 807, 1072, 1649, 2033
AsuNHI GCTAGC 1 cut(s) 725
AvaII GGWCC 6 cut(s) 524, 806, 1028, 1292, 1748, 2683
AxyI CCTNAGG 2 cut(s) 534, 1368
BaeGI GKGCMC 3 cut(s) 108, 2653, 2918
BalI TGGCCA 3 cut(s) 1412, 2293, 2444
BamHI GGATCC 1 cut(s) 2848
BanI GGYRCC 2 cut(s) 383, 2509
BanII GRGCYC 2 cut(s) 407, 471
BauI CACGAG 1 cut(s) 1626
BbsI GAAGAC 4 cut(s) 146, 857, 1849, 2787
Bbv12I GWGCWC 4 cut(s) 108, 407, 471, 1316
BbvCI CCTCAGC 1 cut(s) 935
BbvI GCAGC 5 cut(s) 189, 558, 981, 1347, 2098
BccI CCATC 6 cut(s) 239, 395, 1283, 1457, 2674, 3009
BcgI CGANNNNNNTGC 2 cut(s) 2096, 2130
BciT130I CCWGG 4 cut(s) 1248, 1803, 1905, 2228
BciVI GTATCC 2 cut(s) 2495, 3003
BcnI CCSGG 1 cut(s) 1708
BcoDI GTCTC 5 cut(s) 156, 1482, 1904, 2370, 2848
BcuI ACTAGT 1 cut(s) 712
BfaI CTAG 9 cut(s) 713, 726, 978, 1286, 1592, 2057, 2687, 2781, 2901
BfmI CTRYAG 2 cut(s) 1821, 2557
BfoI RGCGCY 1 cut(s) 2513
BfuI GTATCC 2 cut(s) 2495, 3003
BglI GCCNNNNNGGC 1 cut(s) 2299
BisI GCNGC 6 cut(s) 178, 181, 572, 970, 1336, 2087
BlsI GCNGC 6 cut(s) 179, 182, 573, 971, 1337, 2088
Bme1390I CCNGG 5 cut(s) 1248, 1708, 1803, 1905, 2228
Bme18I GGWCC 6 cut(s) 524, 806, 1028, 1292, 1748, 2683
BmgT120I GGNCC 9 cut(s) 524, 740, 806, 1028, 1292, 1704, 1748, 2683, 2954
BmiI GGNNCC 4 cut(s) 385, 1345, 2511, 2850
BmrFI CCNGG 5 cut(s) 1248, 1708, 1803, 1905, 2228
BmrI ACTGGG 3 cut(s) 143, 314, 603
BmsI GCATC 4 cut(s) 1081, 1734, 1975, 2866
BmtI GCTAGC 1 cut(s) 729
BmuI ACTGGG 3 cut(s) 143, 314, 603
BpiI GAAGAC 4 cut(s) 146, 857, 1849, 2787
BplI GAGNNNNNCTC 2 cut(s) 2828, 2860
BpmI CTGGAG 1 cut(s) 378
Bpu10I CCTNAGC 3 cut(s) 377, 935, 1109
BpuEI CTTGAG 2 cut(s) 805, 820
BpuMI CCSGG 1 cut(s) 1708
BsaBI GATNNNNATC 2 cut(s) 2409, 2991
BsaHI GRCGYC 1 cut(s) 2510
BsaI GGTCTC 2 cut(s) 1904, 2848
BsaJI CCNNGG 6 cut(s) 191, 1246, 1903, 2179, 2696, 2957
BsaWI WCCGGW 5 cut(s) 269, 953, 1340, 1955, 2613
BsaXI ACNNNNNCTCC 2 cut(s) 376, 406
Bsc4I CCNNNNNNNGG 9 cut(s) 179, 1369, 1383, 1713, 1736, 1802, 1826, 2620, 2702
Bse118I RCCGGY 2 cut(s) 1340, 1955
Bse1I ACTGG 7 cut(s) 138, 320, 598, 698, 1015, 1030, 3023
Bse21I CCTNAGG 2 cut(s) 534, 1368
Bse3DI GCAATG 3 cut(s) 2529, 2770, 2886
Bse8I GATNNNNATC 2 cut(s) 2409, 2991
BseBI CCWGG 4 cut(s) 1248, 1803, 1905, 2228
BseDI CCNNGG 6 cut(s) 191, 1246, 1903, 2179, 2696, 2957
BseGI GGATG 7 cut(s) 387, 1096, 1624, 1725, 1933, 2189, 3001
BseJI GATNNNNATC 2 cut(s) 2409, 2991
BseLI CCNNNNNNNGG 9 cut(s) 179, 1369, 1383, 1713, 1736, 1802, 1826, 2620, 2702
BseMI GCAATG 3 cut(s) 2529, 2770, 2886
BseMII CTCAG 3 cut(s) 368, 548, 949
BseNI ACTGG 7 cut(s) 138, 320, 598, 698, 1015, 1030, 3023
BseRI GAGGAG 4 cut(s) 238, 1752, 1866, 2738
BseSI GKGCMC 3 cut(s) 108, 2653, 2918
BseXI GCAGC 5 cut(s) 189, 558, 981, 1347, 2098
BshFI GGCC 9 cut(s) 183, 742, 1045, 1412, 1706, 2293, 2444, 2785, 2956
BshNI GGYRCC 2 cut(s) 383, 2509
BshTI ACCGGT 2 cut(s) 1340, 1955
BsiHKAI GWGCWC 4 cut(s) 108, 407, 471, 1316
BsiSI CCGG 6 cut(s) 270, 954, 1341, 1707, 1956, 2614
BslFI GGGAC 3 cut(s) 1229, 1243, 1729
BslI CCNNNNNNNGG 9 cut(s) 179, 1369, 1383, 1713, 1736, 1802, 1826, 2620, 2702
BsmAI GTCTC 5 cut(s) 156, 1482, 1904, 2370, 2848
BsmBI CGTCTC 1 cut(s) 156
BsmFI GGGAC 3 cut(s) 1229, 1243, 1729
BsmI GAATGC 1 cut(s) 232
BsnI GGCC 9 cut(s) 183, 742, 1045, 1412, 1706, 2293, 2444, 2785, 2956
Bso31I GGTCTC 2 cut(s) 1904, 2848
Bsp1286I GDGCHC 6 cut(s) 108, 407, 471, 1316, 2653, 2918
Bsp1407I TGTACA 1 cut(s) 1425
Bsp19I CCATGG 2 cut(s) 191, 2957
BspACI CCGC 8 cut(s) 180, 367, 381, 729, 1363, 1793, 2527, 2592
BspANI GGCC 9 cut(s) 183, 742, 1045, 1412, 1706, 2293, 2444, 2785, 2956
BspCNI CTCAG 3 cut(s) 369, 547, 948
BspHI TCATGA 2 cut(s) 2344, 2833
BspLI GGNNCC 4 cut(s) 385, 1345, 2511, 2850
BspOI GCTAGC 1 cut(s) 729
BspPI GGATC 8 cut(s) 164, 194, 553, 1781, 2687, 2713, 2843, 2856
BspT107I GGYRCC 2 cut(s) 383, 2509
BspTNI GGTCTC 2 cut(s) 1904, 2848
BsrBI CCGCTC 1 cut(s) 381
BsrDI GCAATG 3 cut(s) 2529, 2770, 2886
BsrFI RCCGGY 2 cut(s) 1340, 1955
BsrGI TGTACA 1 cut(s) 1425
BsrI ACTGG 7 cut(s) 138, 320, 598, 698, 1015, 1030, 3023
BssAI RCCGGY 2 cut(s) 1340, 1955
BssECI CCNNGG 6 cut(s) 191, 1246, 1903, 2179, 2696, 2957
BssNI GRCGYC 1 cut(s) 2510
BssSI CACGAG 1 cut(s) 1626
BssT1I CCWWGG 3 cut(s) 191, 2696, 2957
Bst2BI CACGAG 1 cut(s) 1626
Bst2UI CCWGG 4 cut(s) 1248, 1803, 1905, 2228
Bst4CI ACNGT 9 cut(s) 239, 256, 452, 656, 1162, 1243, 1425, 1498, 2071
Bst6I CTCTTC 3 cut(s) 414, 485, 2451
BstACI GRCGYC 1 cut(s) 2510
BstAUI TGTACA 1 cut(s) 1425
BstC8I GCNNGC 7 cut(s) 55, 727, 1132, 1438, 1817, 1949, 2810
BstDEI CTNAG 5 cut(s) 377, 534, 935, 1109, 1368
BstDSI CCRYGG 3 cut(s) 191, 2179, 2957
BstENI CCTNNNNNAGG 1 cut(s) 1734
BstF5I GGATG 7 cut(s) 387, 1096, 1624, 1725, 1933, 2189, 3001
BstH2I RGCGCY 1 cut(s) 2513
BstHHI GCGC 3 cut(s) 907, 1563, 2512
BstMAI GTCTC 5 cut(s) 156, 1482, 1904, 2370, 2848
BstMWI GCNNNNNNNGC 4 cut(s) 77, 293, 2299, 2972
BstNI CCWGG 4 cut(s) 1248, 1803, 1905, 2228
BstNSI RCATGY 1 cut(s) 2812
BstSCI CCNGG 5 cut(s) 1246, 1706, 1801, 1903, 2226
BstSFI CTRYAG 2 cut(s) 1821, 2557
BstSLI GKGCMC 3 cut(s) 108, 2653, 2918
BstV1I GCAGC 5 cut(s) 189, 558, 981, 1347, 2098
BstV2I GAAGAC 4 cut(s) 146, 857, 1849, 2787
BstX2I RGATCY 3 cut(s) 169, 545, 2848
BstYI RGATCY 3 cut(s) 169, 545, 2848
Bsu36I CCTNAGG 2 cut(s) 534, 1368
BsuI GTATCC 2 cut(s) 2495, 3003
BsuRI GGCC 9 cut(s) 183, 742, 1045, 1412, 1706, 2293, 2444, 2785, 2956
BtgI CCRYGG 3 cut(s) 191, 2179, 2957
BtsCI GGATG 7 cut(s) 387, 1096, 1624, 1725, 1933, 2189, 3001
BtsIMutI CAGTG 6 cut(s) 131, 163, 252, 792, 854, 1494
Cac8I GCNNGC 7 cut(s) 55, 727, 1132, 1438, 1817, 1949, 2810
CciI TCATGA 2 cut(s) 2344, 2833
CfoI GCGC 3 cut(s) 907, 1563, 2512
Cfr10I RCCGGY 2 cut(s) 1340, 1955
Cfr13I GGNCC 9 cut(s) 524, 740, 806, 1028, 1292, 1704, 1748, 2683, 2954
CseI GACGC 3 cut(s) 173, 2230, 2964
CsiI ACCWGGT 1 cut(s) 1801
Csp6I GTAC 8 cut(s) 240, 384, 1034, 1201, 1306, 1426, 2224, 2319
CspAI ACCGGT 2 cut(s) 1340, 1955
CspCI CAANNNNNGTGG 4 cut(s) 2168, 2203, 2727, 2762
CviQI GTAC 8 cut(s) 240, 384, 1034, 1201, 1306, 1426, 2224, 2319
DdeI CTNAG 5 cut(s) 377, 534, 935, 1109, 1368
DinI GGCGCC 1 cut(s) 2511
DrdI GACNNNNNNGTC 1 cut(s) 2968
DseDI GACNNNNNNGTC 1 cut(s) 2968
EaeI YGGCCR 5 cut(s) 181, 1043, 1410, 2291, 2442
Eam1104I CTCTTC 3 cut(s) 414, 485, 2451
EarI CTCTTC 3 cut(s) 414, 485, 2451
Ecl136II GAGCTC 2 cut(s) 405, 469
Eco130I CCWWGG 3 cut(s) 191, 2696, 2957
Eco147I AGGCCT 1 cut(s) 2785
Eco24I GRGCYC 2 cut(s) 407, 471
Eco31I GGTCTC 2 cut(s) 1904, 2848
Eco47I GGWCC 6 cut(s) 524, 806, 1028, 1292, 1748, 2683
Eco53kI GAGCTC 2 cut(s) 405, 469
Eco57I CTGAAG 3 cut(s) 509, 1164, 2970
Eco81I CCTNAGG 2 cut(s) 534, 1368
EcoICRI GAGCTC 2 cut(s) 405, 469
EcoNI CCTNNNNNAGG 1 cut(s) 1734
EcoRII CCWGG 4 cut(s) 1246, 1801, 1903, 2226
EcoT14I CCWWGG 3 cut(s) 191, 2696, 2957
EcoT38I GRGCYC 2 cut(s) 407, 471
EgeI GGCGCC 1 cut(s) 2511
EheI GGCGCC 1 cut(s) 2511
ErhI CCWWGG 3 cut(s) 191, 2696, 2957
Esp3I CGTCTC 1 cut(s) 156
FalI AAGNNNNNCTT 6 cut(s) 1047, 1079, 1361, 1393, 1589, 1621
FaqI GGGAC 3 cut(s) 1229, 1243, 1729
FauI CCCGC 4 cut(s) 374, 1800, 2520, 2585
FauNDI CATATG 1 cut(s) 909
FblI GTMKAC 2 cut(s) 982, 1773
Fnu4HI GCNGC 6 cut(s) 178, 181, 572, 970, 1336, 2087
FokI GGATG 7 cut(s) 374, 1103, 1631, 1712, 1940, 2196, 2988
FriOI GRGCYC 2 cut(s) 407, 471
Fsp4HI GCNGC 6 cut(s) 178, 181, 572, 970, 1336, 2087
FspBI CTAG 9 cut(s) 713, 726, 978, 1286, 1592, 2057, 2687, 2781, 2901
FspI TGCGCA 1 cut(s) 906
GlaI GCGC 3 cut(s) 906, 1562, 2511
GluI GCNGC 6 cut(s) 178, 181, 572, 970, 1336, 2087
GsuI CTGGAG 1 cut(s) 378
HaeII RGCGCY 1 cut(s) 2513
HaeIII GGCC 9 cut(s) 183, 742, 1045, 1412, 1706, 2293, 2444, 2785, 2956
HapII CCGG 6 cut(s) 270, 954, 1341, 1707, 1956, 2614
HgaI GACGC 3 cut(s) 173, 2230, 2964
HhaI GCGC 3 cut(s) 907, 1563, 2512
Hin1I GRCGYC 1 cut(s) 2510
Hin6I GCGC 3 cut(s) 905, 1561, 2510
HinP1I GCGC 3 cut(s) 905, 1561, 2510
HincII GTYRAC 2 cut(s) 556, 2946
HindII GTYRAC 2 cut(s) 556, 2946
HindIII AAGCTT 3 cut(s) 1549, 2447, 2629
HpaII CCGG 6 cut(s) 270, 954, 1341, 1707, 1956, 2614
HphI GGTGA 7 cut(s) 331, 355, 472, 807, 1072, 1649, 2033
Hpy166II GTNNAC 6 cut(s) 106, 556, 806, 983, 1774, 2946
Hpy8I GTNNAC 6 cut(s) 106, 556, 806, 983, 1774, 2946
Hpy99I CGWCG 1 cut(s) 2246
HpyCH4III ACNGT 9 cut(s) 239, 256, 452, 656, 1162, 1243, 1425, 1498, 2071
HpyF10VI GCNNNNNNNGC 4 cut(s) 77, 293, 2299, 2972
HpyF3I CTNAG 5 cut(s) 377, 534, 935, 1109, 1368
Hsp92I GRCGYC 1 cut(s) 2510
HspAI GCGC 3 cut(s) 905, 1561, 2510
KasI GGCGCC 1 cut(s) 2509
KpnI GGTACC 1 cut(s) 387
LmnI GCTCC 8 cut(s) 77, 251, 402, 538, 1215, 1509, 1669, 2181
Lsp1109I GCAGC 5 cut(s) 189, 558, 981, 1347, 2098
LweI GCATC 4 cut(s) 1081, 1734, 1975, 2866
MabI ACCWGGT 1 cut(s) 1801
MaeI CTAG 9 cut(s) 713, 726, 978, 1286, 1592, 2057, 2687, 2781, 2901
MaeIII GTNAC 5 cut(s) 61, 650, 656, 1669, 2767
MbiI CCGCTC 1 cut(s) 381
MflI RGATCY 3 cut(s) 169, 545, 2848
MhlI GDGCHC 6 cut(s) 108, 407, 471, 1316, 2653, 2918
MlsI TGGCCA 3 cut(s) 1412, 2293, 2444
MluNI TGGCCA 3 cut(s) 1412, 2293, 2444
Mly113I GGCGCC 1 cut(s) 2510
MlyI GAGTC 3 cut(s) 1749, 1863, 2951
MmeI TCCRAC 3 cut(s) 1816, 1828, 2265
Mox20I TGGCCA 3 cut(s) 1412, 2293, 2444
MroXI GAANNNNTTC 3 cut(s) 11, 1162, 1604
MscI TGGCCA 3 cut(s) 1412, 2293, 2444
MseI TTAA 9 cut(s) 942, 1007, 1970, 2001, 2082, 2127, 2415, 2451, 2715
Msp20I TGGCCA 3 cut(s) 1412, 2293, 2444
MspA1I CMGCKG 1 cut(s) 180
MspI CCGG 6 cut(s) 270, 954, 1341, 1707, 1956, 2614
MspR9I CCNGG 5 cut(s) 1248, 1708, 1803, 1905, 2228
Mva1269I GAATGC 1 cut(s) 232
MvaI CCWGG 4 cut(s) 1248, 1803, 1905, 2228
MwoI GCNNNNNNNGC 4 cut(s) 77, 293, 2299, 2972
NarI GGCGCC 1 cut(s) 2510
NciI CCSGG 1 cut(s) 1708
NcoI CCATGG 2 cut(s) 191, 2957
NdeI CATATG 1 cut(s) 909
NheI GCTAGC 1 cut(s) 725
NlaIV GGNNCC 4 cut(s) 385, 1345, 2511, 2850
NmuCI GTSAC 2 cut(s) 650, 656
NsbI TGCGCA 1 cut(s) 906
NspI RCATGY 1 cut(s) 2812
PaeI GCATGC 1 cut(s) 2812
PagI TCATGA 2 cut(s) 2344, 2833
PceI AGGCCT 1 cut(s) 2785
PctI GAATGC 1 cut(s) 232
PdmI GAANNNNTTC 3 cut(s) 11, 1162, 1604
PfeI GAWTC 9 cut(s) 218, 718, 789, 812, 1587, 1690, 2113, 2351, 3008
PflMI CCANNNNNTGG 1 cut(s) 1802
PinAI ACCGGT 2 cut(s) 1340, 1955
PkrI GCNGC 6 cut(s) 179, 182, 573, 971, 1337, 2088
PleI GAGTC 3 cut(s) 1748, 1862, 2950
PluTI GGCGCC 1 cut(s) 2513
PpsI GAGTC 3 cut(s) 1748, 1862, 2950
PsiI TTATAA 1 cut(s) 2046
Psp124BI GAGCTC 2 cut(s) 407, 471
Psp6I CCWGG 4 cut(s) 1246, 1801, 1903, 2226
PspGI CCWGG 4 cut(s) 1246, 1801, 1903, 2226
PspN4I GGNNCC 4 cut(s) 385, 1345, 2511, 2850
PspPI GGNCC 9 cut(s) 524, 740, 806, 1028, 1292, 1704, 1748, 2683, 2954
PsuI RGATCY 3 cut(s) 169, 545, 2848
RsaI GTAC 8 cut(s) 241, 385, 1035, 1202, 1307, 1427, 2225, 2320
RsaNI GTAC 8 cut(s) 240, 384, 1034, 1201, 1306, 1426, 2224, 2319
SacI GAGCTC 2 cut(s) 407, 471
SaqAI TTAA 9 cut(s) 942, 1007, 1970, 2001, 2082, 2127, 2415, 2451, 2715
SatI GCNGC 6 cut(s) 178, 181, 572, 970, 1336, 2087
Sau96I GGNCC 9 cut(s) 524, 740, 806, 1028, 1292, 1704, 1748, 2683, 2954
SchI GAGTC 3 cut(s) 1749, 1863, 2951
ScrFI CCNGG 5 cut(s) 1248, 1708, 1803, 1905, 2228
SduI GDGCHC 6 cut(s) 108, 407, 471, 1316, 2653, 2918
SexAI ACCWGGT 1 cut(s) 1801
SfaNI GCATC 4 cut(s) 1081, 1734, 1975, 2866
SfcI CTRYAG 2 cut(s) 1821, 2557
SfoI GGCGCC 1 cut(s) 2511
SinI GGWCC 6 cut(s) 524, 806, 1028, 1292, 1748, 2683
SmlI CTYRAG 2 cut(s) 784, 799
SmoI CTYRAG 2 cut(s) 784, 799
SpeI ACTAGT 1 cut(s) 712
SphI GCATGC 1 cut(s) 2812
SseBI AGGCCT 1 cut(s) 2785
SsiI CCGC 8 cut(s) 180, 367, 381, 729, 1363, 1793, 2527, 2592
SspDI GGCGCC 1 cut(s) 2509
SspI AATATT 2 cut(s) 1196, 1573
SspMI CTAG 9 cut(s) 713, 726, 978, 1286, 1592, 2057, 2687, 2781, 2901
SstI GAGCTC 2 cut(s) 407, 471
StuI AGGCCT 1 cut(s) 2785
StyD4I CCNGG 5 cut(s) 1246, 1706, 1801, 1903, 2226
StyI CCWWGG 3 cut(s) 191, 2696, 2957
TaaI ACNGT 9 cut(s) 239, 256, 452, 656, 1162, 1243, 1425, 1498, 2071
TaqI TCGA 4 cut(s) 22, 85, 1154, 2774
TaqII GACCGA 1 cut(s) 929
TatI WGTACW 3 cut(s) 239, 1200, 1425
TauI GCSGC 1 cut(s) 183
TfiI GAWTC 9 cut(s) 218, 718, 789, 812, 1587, 1690, 2113, 2351, 3008
Tru1I TTAA 9 cut(s) 942, 1007, 1970, 2001, 2082, 2127, 2415, 2451, 2715
Tru9I TTAA 9 cut(s) 942, 1007, 1970, 2001, 2082, 2127, 2415, 2451, 2715
TscAI CASTG 6 cut(s) 138, 163, 259, 799, 861, 1501
TseFI GTSAC 2 cut(s) 650, 656
TseI GCWGC 5 cut(s) 177, 571, 969, 1335, 2086
Tsp45I GTSAC 2 cut(s) 650, 656
TspGWI ACGGA 1 cut(s) 2196
TspRI CASTG 6 cut(s) 138, 163, 259, 799, 861, 1501
Van91I CCANNNNNTGG 1 cut(s) 1802
VneI GTGCAC 1 cut(s) 104
VpaK11BI GGWCC 6 cut(s) 524, 806, 1028, 1292, 1748, 2683
XagI CCTNNNNNAGG 1 cut(s) 1734
XapI RAATTY 3 cut(s) 151, 1961, 2120
XbaI TCTAGA 1 cut(s) 1285
XceI RCATGY 1 cut(s) 2812
XcmI CCANNNNNNNNNTGG 2 cut(s) 826, 1220
XmiI GTMKAC 2 cut(s) 982, 1773
XmnI GAANNNNTTC 3 cut(s) 11, 1162, 1604
XspI CTAG 9 cut(s) 713, 726, 978, 1286, 1592, 2057, 2687, 2781, 2901
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.