Rroxscaffold_1G00050080

leucine-rich repeat receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Forward (+)
70396088 .. 70407193
11106 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00050080.1

Sequence Viewer

Length: 2907 bp
ATGAGAATGAGTTACATTTTCTTCTTCCCTCGTCCTCTTCTTGTTCTGCCTCTCCTGCTAGTTTGCTCTGCAACTTTTGCTTTCGGAGCCACTCAATTACTAGAAGATGAAGTTGAAGCTTTAAAGGACATAGCAAAGACGCTAGGGAAGACAGACTGGAATTTCAGTGCTGATCCCTGTGGCAAGGATTACGGGTGGGCTAATCTGAGCCCGGTAAAAGGATTCGAAGATGCCGTCACCTGCAATTGTACCTTAGTTCCCGATTCCACTGTTTGCCACGTCACAAGCATAGTTTTGAAATCTCAGAATTTGCCGGGAAAACTCCCGCCAGAGTTGATTAGGCTCCCCTATCTCCAAGAAATTGACCTCTCCCGCAACTACCTGAATGGCACCATCCCTCCAGAATGGGGTGCCCTGCCACTACTTAACATTTCCCTTGTTGGAAATCGTTTGACAGGTTCTCTACCTGTTGAGCTTGCAAACATCACCACCCTGAAAAGTTTGGCCATCGATTTCAATAGCTTCTCTGGAGTTCTTCCTGTGAAGCTTGGGAACTTGCCCAACATAGAAAGAATGCTTCTTACCTCAAACAACTTTTCTGGGGAGTTGCCGGAAACATTTGCAGGGCTTACTACGCTAAAAGACTTTCGGATTAGTGACAATTCCTTTTCTGGAAAGATACCTAATTTTATTCAGAACTGGACCAATCTAGAAAAACTAGCAATTCAGGCTAGTGGCTTGACGGGGCCCATTCCTTCCGGCATCTCCCTTTTGACAAAATTAACTGACATGAGAGTTACTGACTTGAATGGACCTGATTCATCATTTCCTCCACTTGAGAATATGAAAAAACTGAAGACACTGATGTTGCGGAATTGCAATATTAGTGGACAGCTACCTGCATATCTTGGGGAAATGACGACTTTGAAAACTTTAGACCTCAGCTTTAACAAGCTAACTGGAGAAATTCCAAGCAGCTTTTCTGGACTAGCAAATGTGGATTACATAGCAAACTTAACTTACGAGTACATGTTAATTACTACAGGAACTTGTTTGCAAGCTCTTCCGGGGACAATACTTCAATGTCCAAAAACTTGGTACTCTCTCCACATAAATTGTGGCGGAAAAGAAGCAACTCTCAGTGAAAATTTTACAAGGTCCACAATGGCAACATATGAGGATGATACAGAAAAATCTGGGCCTTCATCATTTTACCAAAGCAGAACAAATTGGGCATCAAGCAACACTGGTTACTTTACTGATGATGATCGTCCTACAGATACCTTTATCTGGACTAATACATCTAGACTTTCTATAACCAATCCTCAGCTGTATTTGAATGCACGTCTTTCTCCTATTTCTCTAACTTATTATGGGTTTTGTCTGGGAAATGGAATCTACACAGTAAACCTTCATTTTGCCGAGATAATGTTTACAAATGACAAAACATATAGCAGCTTGGGAAGGCGTATATTTGATATTTATATACAGGGGTCACTAGTGCTGAAGGATTTTAACATTGCGAATGACGCAGGAGGGTTTGGTATAGCAGTCATAAAAAACTTCACTGCTAATGTAACCAGTAATACCTTGGAGATCCGTTTATTTTGGGCTGGGAAAGGAACCACTGGCATCCCTATAAGAGGAATCTATGGCCCTCTTATCTCCGCTATTTCTGTAGATCCTAACTTTGAACCCCCGCAAGAGGCCTCGGCAGGAGGTGGAGGTGGAAGTGGAATATCTGTAGGTGTCCTGGTTGGAATTGTGGTTGGGGGAATCTTCATTATACTACTTATTTTTGGTATTCTTTGGTGGAAAGGCTTTCTAAGAAGAGAAAGGACTCTTGAACAAGCTGCCACAAACGACTTTAACCCAGCTAATAAGATTGGAGAAGGTGGTTTTGGTCCTGTTCACAAGGGCCTTCTATCAGATGGCACCGTAATTGCTGTTAAGCAGCTTTCTGCCAAATCAAAACAAGGGAATCGTGAATTTGTGAATGAGATTGGCATGATTTCTGCTTTGCAACACCCTCATCTTGTCAAGCTCTATGGATGCTGCATTGAAGGAAATCAATTGTTCCTTGTCTATGAGTACCTGGAAAATAATAGTCTTGCACGTGCTTTATTTGGCCCGGAAGAACTTCAGTTAAAGTTAGATTGGCCAACAAGGCACAATATCTGTGTCGGTATAGCAAGAGGTTTGGCCTTCCTCCATGAGGAGTCAAGGTTGAAGATCGTTCATCGAGACATCAAAGCTACTAATGTGCTACTTGATAAAAATCTTTTCCCCAAGATATCCGACTTTGGATTGGCCAAACTTGATGAAGAGGAGAATACCCACATAAGCACCCGAATTGCTGGAACTTATGGATATATGGCACCAGAATATGCGATGCGTGGTTATTTAACTGATAAAGCCGATGTTTATAGTTTTGGAATTGTTGTACTGGAAATTGTCAGTGGGAGGAGCAATACAACTAACCGGACAAAGGAAGAATGCTTTTATCTTCTTGATTGGGCACTTCTTCTAAAAGAGAAAGGGAACGTACTGGAACTAGTTGATCCAAGGTTGGGCTCAGACTTTAACAAAGAAGAAATGATGATCACAATCAATGTGGCTCTTCTTTGCACTAATGTCATTGCAGCAGATAGGCCTACCATGTCTTCAGTGGTGAGCATGCTTGAAGGCAAGGCTTCTGTCCAAGAGTTGGTCATGGATCCAAATGCGTCGAAGGATGAGATCAATGAAATGAGGAAACATTTTCAGTCCATCGTTGCAGAAAACACGAGTGAGAATAGTCAGAGGCAAACTATGTCAACCGAAGGGCCTTGGACTGCTTCATCTACATCAGCCAATGATCTTTATCCAGTCAATCCTGATTCAAATTACTTGGAGAACAGAAATTAG

Protein Analysis

968

Amino Acids

106.62

Weight (kDa)

5.36

Isoelectric Point (pI)

30.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 284 - 336 7.6e-06 Leucine rich repeat
Malectin PF11721 368 - 558 1.2e-40 Malectin domain
Pkinase PF00069 626 - 832 1.2e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 627 - 834 1e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000292)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53420 AT3G14840
fragaria_vesca FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17850 FvH4_3g17850 FvH4_3g17850 FvH4_3g17850 FvH4_3g17851
malus_domestica MD03G1246600.v1.1 MD06G1045200.v1.1 MD06G1045400.v1.1 MD11G1267800.v1.1 MD11G1267900.v1.1 MD11G1268100.v1.1 MD11G1268300.v1.1 MD11G1268500.v1.1 MD11G1268600.v1.1
prunus_persica Prupe.4G157700_v2.0.a1 Prupe.4G157700_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157900_v2.0.a1 Prupe.4G157900_v2.0.a1 Prupe.4G157900_v2.0.a1
pyrus_communis pycom03g19540 pycom11g23600 pycom11g23630 pycom11g23690 pycom11g23720 pycom11g23730 pycom11g23740 pycom11g23750
rosa_chinensis RchiOBHm_Chr0c40g0503411 RchiOBHm_Chr0c40g0503421 RchiOBHm_Chr5g0029631 RchiOBHm_Chr5g0029661 RchiOBHm_Chr5g0029701 RchiOBHm_Chr5g0029741 RchiOBHm_Chr5g0029771 RchiOBHm_Chr5g0029781 RchiOBHm_Chr5g0029811 RchiOBHm_Chr5g0029851 RchiOBHm_Chr5g0029871 RchiOBHm_Chr5g0029891 RchiOBHm_Chr7g0222221
rosa_laevigata RLG00000017380 RLG00000032873 RLG00000033188 RLG00000033190 RLG00000033192 RLG00000033193 RLG00000033194 RLG00000033196 RLG00000033199 RLG00000033238
rosa_multiflora Rmu_co8359987.1_g000001 Rmu_co8444909.1_g000001 Rmu_sc0001608.1_g000007 Rmu_sc0001608.1_g000009 Rmu_sc0001608.1_g000013 Rmu_sc0001608.1_g000018 Rmu_sc0001608.1_g000023 Rmu_sc0001608.1_g000040 Rmu_sc0003238.1_g000016 Rmu_sc0003368.1_g000026 Rmu_sc0003368.1_g000034 Rmu_sc0003368.1_g000043 Rmu_sc0003368.1_g000047 Rmu_sc0003368.1_g000052 Rmu_sc0003368.1_g000054 Rmu_sc0004963.1_g000001
rosa_roxburghii Rroxscaffold_1G00050080 Rroxscaffold_1G00050090 Rroxscaffold_1G00050110 Rroxscaffold_1G00050120 Rroxscaffold_1G00050180 Rroxscaffold_1G00050190 Rroxscaffold_1G00050220 Rroxscaffold_1G00050270 Rroxscaffold_1G00050300
rosa_rugosa Rorug04G0065200 Rorug05G0114900 Rorug05G0115000 Rorug05G0115100 Rorug05G0120100 Rorug05G0238900
rosa_samantha Rh5AG207800 Rh5AG208000 Rh5AG208300 Rh5AG208400 Rh5AG208800 Rh5AG294900 Rh5AG295000 Rh5AG295400 Rh5CG230400 Rh7AG347800
rosa_wichuraiana Rw0G005370 Rw0G012460 Rw0G019060 Rw5G018910 Rw5G018920 Rw5G018930 Rw5G018940 Rw5G018960 Rw5G018970 Rw5G018980 Rw5G018990 Rw5G019000 Rw7G029840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 248
Acc36I ACCTGC 2 cut(s) 248, 907
AccB1I GGYRCC 4 cut(s) 389, 410, 1934, 2377
AccB7I CCANNNNNTGG 1 cut(s) 2707
AciI CCGC 6 cut(s) 326, 373, 871, 1122, 1668, 1700
AclWI GGATC 6 cut(s) 167, 1591, 1676, 2555, 2711, 2724
AcoI YGGCCR 3 cut(s) 504, 2159, 2310
AcsI RAATTY 5 cut(s) 160, 307, 966, 1147, 1988
AcuI CTGAAG 4 cut(s) 875, 1526, 2126, 2649
AcvI CACGTG 1 cut(s) 2117
AfaI GTAC 6 cut(s) 250, 1028, 1100, 2093, 2445, 2547
AfiI CCNNNNNNNGG 9 cut(s) 218, 407, 1290, 1643, 1705, 2215, 2488, 2570, 2707
AflIII ACRYGT 1 cut(s) 1029
AhlI ACTAGT 2 cut(s) 1498, 2554
AjiI CACGTC 2 cut(s) 280, 1346
AjnI CCWGG 2 cut(s) 1752, 2094
AjuI GAANNNNNNNTTGG 4 cut(s) 964, 996, 1884, 1916
Alw26I GTCTC 1 cut(s) 2238
AlwI GGATC 6 cut(s) 167, 1591, 1676, 2555, 2711, 2724
ApaI GGGCCC 1 cut(s) 750
ApeKI GCWGC 6 cut(s) 975, 1455, 1853, 1954, 2055, 2642
ApoI RAATTY 5 cut(s) 160, 307, 966, 1147, 1988
ArsI GACNNNNNNTTYG 2 cut(s) 219, 251
Asp700I GAANNNNTTC 1 cut(s) 2139
AsuC2I CCSGG 4 cut(s) 212, 315, 1068, 2132
AsuHPI GGTGA 3 cut(s) 229, 478, 2683
AsuII TTCGAA 1 cut(s) 225
AvaII GGWCC 4 cut(s) 702, 812, 1158, 1904
BaeGI GKGCMC 3 cut(s) 415, 750, 2521
BalI TGGCCA 3 cut(s) 506, 2161, 2312
BamHI GGATCC 1 cut(s) 2716
BanI GGYRCC 4 cut(s) 389, 410, 1934, 2377
BanII GRGCYC 3 cut(s) 212, 750, 2576
BauI CACGAG 1 cut(s) 2785
BbrPI CACGTG 1 cut(s) 2117
BbsI GAAGAC 3 cut(s) 155, 863, 2655
BbvCI CCTCAGC 2 cut(s) 941, 1326
BbvI GCAGC 6 cut(s) 987, 1467, 1840, 1966, 2042, 2654
BccI CCATC 4 cut(s) 401, 515, 1925, 2777
BceAI ACGGC 1 cut(s) 218
BciT130I CCWGG 2 cut(s) 1754, 2096
BclI TGATCA 1 cut(s) 2601
BcnI CCSGG 4 cut(s) 212, 315, 1068, 2132
BcoDI GTCTC 1 cut(s) 2238
BcuI ACTAGT 2 cut(s) 1498, 2554
BfmI CTRYAG 4 cut(s) 1041, 1275, 1677, 1743
BfuAI ACCTGC 2 cut(s) 248, 907
BglI GCCNNNNNGGC 1 cut(s) 2167
BisI GCNGC 6 cut(s) 976, 1456, 1854, 1955, 2056, 2643
BlsI GCNGC 6 cut(s) 977, 1457, 1855, 1956, 2057, 2644
Bme1390I CCNGG 6 cut(s) 212, 315, 1068, 1754, 2096, 2132
Bme18I GGWCC 4 cut(s) 702, 812, 1158, 1904
BmgBI CACGTC 2 cut(s) 280, 1346
BmrFI CCNGG 6 cut(s) 212, 315, 1068, 1754, 2096, 2132
BmsI GCATC 6 cut(s) 220, 771, 1244, 1641, 2042, 2382
BpiI GAAGAC 3 cut(s) 155, 863, 2655
BpmI CTGGAG 3 cut(s) 384, 549, 981
Bpu10I CCTNAGC 2 cut(s) 941, 1326
Bpu14I TTCGAA 1 cut(s) 225
BpuEI CTTGAG 1 cut(s) 857
BpuMI CCSGG 4 cut(s) 212, 315, 1068, 2132
Bsa29I ATCGAT 1 cut(s) 510
BsaAI YACGTR 1 cut(s) 2117
BsaBI GATNNNNATC 4 cut(s) 1266, 2277, 2606, 2862
BsaJI CCNNGG 5 cut(s) 1067, 1590, 1710, 2564, 2828
BsaWI WCCGGW 1 cut(s) 2481
BsaXI ACNNNNNCTCC 4 cut(s) 382, 412, 2210, 2240
Bsc4I CCNNNNNNNGG 9 cut(s) 218, 407, 1290, 1643, 1705, 2215, 2488, 2570, 2707
Bse1I ACTGG 9 cut(s) 161, 704, 964, 1252, 1581, 1633, 2451, 2553, 2867
Bse3DI GCAATG 2 cut(s) 1518, 2637
Bse8I GATNNNNATC 4 cut(s) 1266, 2277, 2606, 2862
BseBI CCWGG 2 cut(s) 1754, 2096
BseCI ATCGAT 1 cut(s) 510
BseDI CCNNGG 5 cut(s) 1067, 1590, 1710, 2564, 2828
BseGI GGATG 5 cut(s) 393, 1186, 1632, 2057, 2740
BseJI GATNNNNATC 4 cut(s) 1266, 2277, 2606, 2862
BseLI CCNNNNNNNGG 9 cut(s) 218, 407, 1290, 1643, 1705, 2215, 2488, 2570, 2707
BseMI GCAATG 2 cut(s) 1518, 2637
BseMII CTCAG 6 cut(s) 197, 317, 955, 1153, 1340, 2589
BseNI ACTGG 9 cut(s) 161, 704, 964, 1252, 1581, 1633, 2451, 2553, 2867
BseRI GAGGAG 3 cut(s) 2231, 2342, 2479
BseSI GKGCMC 3 cut(s) 415, 750, 2521
BseXI GCAGC 6 cut(s) 987, 1467, 1840, 1966, 2042, 2654
BseYI CCCAGC 2 cut(s) 1613, 1873
BshNI GGYRCC 4 cut(s) 389, 410, 1934, 2377
BshVI ATCGAT 1 cut(s) 510
BsiSI CCGG 7 cut(s) 212, 314, 611, 759, 1067, 2132, 2482
BslFI GGGAC 1 cut(s) 1084
BslI CCNNNNNNNGG 9 cut(s) 218, 407, 1290, 1643, 1705, 2215, 2488, 2570, 2707
BsmAI GTCTC 1 cut(s) 2238
BsmFI GGGAC 1 cut(s) 1084
BsmI GAATGC 3 cut(s) 579, 1345, 2501
Bsp119I TTCGAA 1 cut(s) 225
Bsp120I GGGCCC 1 cut(s) 746
Bsp1286I GDGCHC 5 cut(s) 212, 415, 750, 2521, 2576
BspACI CCGC 6 cut(s) 326, 373, 871, 1122, 1668, 1700
BspCNI CTCAG 6 cut(s) 198, 316, 954, 1152, 1339, 2588
BspDI ATCGAT 1 cut(s) 510
BspMI ACCTGC 2 cut(s) 248, 907
BspPI GGATC 6 cut(s) 167, 1591, 1676, 2555, 2711, 2724
BspQI GCTCTTC 2 cut(s) 1068, 2625
BspT104I TTCGAA 1 cut(s) 225
BspT107I GGYRCC 4 cut(s) 389, 410, 1934, 2377
BsrDI GCAATG 2 cut(s) 1518, 2637
BsrI ACTGG 9 cut(s) 161, 704, 964, 1252, 1581, 1633, 2451, 2553, 2867
BssECI CCNNGG 5 cut(s) 1067, 1590, 1710, 2564, 2828
BssSI CACGAG 1 cut(s) 2785
BssT1I CCWWGG 3 cut(s) 1590, 2564, 2828
Bst2BI CACGAG 1 cut(s) 2785
Bst2UI CCWGG 2 cut(s) 1754, 2096
Bst4CI ACNGT 3 cut(s) 271, 1405, 1939
Bst6I CTCTTC 5 cut(s) 42, 1068, 1825, 2319, 2625
BstAPI GCANNNNNTGC 1 cut(s) 77
BstBAI YACGTR 1 cut(s) 2117
BstBI TTCGAA 1 cut(s) 225
BstC8I GCNNGC 3 cut(s) 477, 1059, 2678
BstDEI CTNAG 8 cut(s) 206, 253, 303, 941, 1139, 1326, 1826, 2575
BstENI CCTNNNNNAGG 2 cut(s) 1641, 2213
BstF5I GGATG 5 cut(s) 393, 1186, 1632, 2057, 2740
BstMAI GTCTC 1 cut(s) 2238
BstMWI GCNNNNNNNGC 7 cut(s) 55, 77, 86, 634, 728, 1529, 2167
BstNI CCWGG 2 cut(s) 1754, 2096
BstNSI RCATGY 2 cut(s) 1033, 2680
BstSCI CCNGG 6 cut(s) 210, 313, 1066, 1752, 2094, 2130
BstSFI CTRYAG 4 cut(s) 1041, 1275, 1677, 1743
BstSLI GKGCMC 3 cut(s) 415, 750, 2521
BstV1I GCAGC 6 cut(s) 987, 1467, 1840, 1966, 2042, 2654
BstV2I GAAGAC 3 cut(s) 155, 863, 2655
BstX2I RGATCY 3 cut(s) 1596, 1681, 2716
BstXI CCANNNNNNTGG 1 cut(s) 1095
BstYI RGATCY 3 cut(s) 1596, 1681, 2716
Bsu15I ATCGAT 1 cut(s) 510
BsuTUI ATCGAT 1 cut(s) 510
BtgZI GCGATG 1 cut(s) 2405
BtrI CACGTC 2 cut(s) 280, 1346
BtsCI GGATG 5 cut(s) 393, 1186, 1632, 2057, 2740
BtsI GCAGTG 1 cut(s) 1566
BtsIMutI CAGTG 9 cut(s) 172, 267, 860, 1147, 1245, 1566, 1626, 2464, 2673
BveI ACCTGC 2 cut(s) 248, 907
Cac8I GCNNGC 3 cut(s) 477, 1059, 2678
ClaI ATCGAT 1 cut(s) 510
CseI GACGC 3 cut(s) 148, 1538, 2715
Csp6I GTAC 6 cut(s) 249, 1027, 1099, 2092, 2444, 2546
CspCI CAANNNNNGTGG 6 cut(s) 868, 903, 1097, 1132, 2595, 2630
CviAII CATG 7 cut(s) 790, 1030, 2008, 2213, 2659, 2677, 2713
CviQI GTAC 6 cut(s) 249, 1027, 1099, 2092, 2444, 2546
DdeI CTNAG 8 cut(s) 206, 253, 303, 941, 1139, 1326, 1826, 2575
DraI TTTAAA 1 cut(s) 123
EaeI YGGCCR 3 cut(s) 504, 2159, 2310
Eam1104I CTCTTC 5 cut(s) 42, 1068, 1825, 2319, 2625
EarI CTCTTC 5 cut(s) 42, 1068, 1825, 2319, 2625
EciI GGCGGA 1 cut(s) 1137
Eco130I CCWWGG 3 cut(s) 1590, 2564, 2828
Eco147I AGGCCT 2 cut(s) 1709, 2653
Eco24I GRGCYC 3 cut(s) 212, 750, 2576
Eco32I GATATC 1 cut(s) 2295
Eco47I GGWCC 4 cut(s) 702, 812, 1158, 1904
Eco57I CTGAAG 4 cut(s) 875, 1526, 2126, 2649
Eco72I CACGTG 1 cut(s) 2117
EcoNI CCTNNNNNAGG 2 cut(s) 1641, 2213
EcoO109I RGGNCCY 3 cut(s) 746, 1918, 2825
EcoRII CCWGG 2 cut(s) 1752, 2094
EcoRV GATATC 1 cut(s) 2295
EcoT14I CCWWGG 3 cut(s) 1590, 2564, 2828
EcoT38I GRGCYC 3 cut(s) 212, 750, 2576
ErhI CCWWGG 3 cut(s) 1590, 2564, 2828
FaeI CATG 7 cut(s) 793, 1033, 2011, 2216, 2662, 2680, 2716
FaqI GGGAC 1 cut(s) 1084
FatI CATG 7 cut(s) 789, 1029, 2007, 2212, 2658, 2676, 2712
FauI CCCGC 3 cut(s) 333, 380, 1707
FauNDI CATATG 1 cut(s) 1174
FbaI TGATCA 1 cut(s) 2601
Fnu4HI GCNGC 6 cut(s) 976, 1456, 1854, 1955, 2056, 2643
FokI GGATG 5 cut(s) 380, 1193, 1619, 2064, 2747
FriOI GRGCYC 3 cut(s) 212, 750, 2576
Fsp4HI GCNGC 6 cut(s) 976, 1456, 1854, 1955, 2056, 2643
GluI GCNGC 6 cut(s) 976, 1456, 1854, 1955, 2056, 2643
GsaI CCCAGC 2 cut(s) 1617, 1877
GsuI CTGGAG 3 cut(s) 384, 549, 981
HapII CCGG 7 cut(s) 212, 314, 611, 759, 1067, 2132, 2482
HgaI GACGC 3 cut(s) 148, 1538, 2715
Hin1II CATG 7 cut(s) 793, 1033, 2011, 2216, 2662, 2680, 2716
HincII GTYRAC 1 cut(s) 2817
HindII GTYRAC 1 cut(s) 2817
HindIII AAGCTT 2 cut(s) 117, 545
HpaII CCGG 7 cut(s) 212, 314, 611, 759, 1067, 2132, 2482
HphI GGTGA 3 cut(s) 229, 478, 2683
Hpy166II GTNNAC 6 cut(s) 890, 1161, 1408, 1434, 1912, 2817
Hpy188I TCNGA 9 cut(s) 86, 207, 306, 651, 696, 1930, 2299, 2578, 2802
Hpy8I GTNNAC 6 cut(s) 890, 1161, 1408, 1434, 1912, 2817
Hpy99I CGWCG 1 cut(s) 2731
HpyCH4III ACNGT 3 cut(s) 271, 1405, 1939
HpyCH4IV ACGT 4 cut(s) 279, 1345, 2116, 2544
HpyF10VI GCNNNNNNNGC 7 cut(s) 55, 77, 86, 634, 728, 1529, 2167
HpyF3I CTNAG 8 cut(s) 206, 253, 303, 941, 1139, 1326, 1826, 2575
HpySE526I ACGT 4 cut(s) 279, 1345, 2116, 2544
Hsp92II CATG 7 cut(s) 793, 1033, 2011, 2216, 2662, 2680, 2716
Ksp22I TGATCA 1 cut(s) 2601
LguI GCTCTTC 2 cut(s) 1068, 2625
LmnI GCTCC 3 cut(s) 86, 348, 2466
Lsp1109I GCAGC 6 cut(s) 987, 1467, 1840, 1966, 2042, 2654
LweI GCATC 6 cut(s) 220, 771, 1244, 1641, 2042, 2382
MaeII ACGT 4 cut(s) 279, 1345, 2116, 2544
MaeIII GTNAC 8 cut(s) 11, 235, 280, 656, 796, 1250, 1494, 1576
MfeI CAATTG 2 cut(s) 244, 2072
MflI RGATCY 3 cut(s) 1596, 1681, 2716
MhlI GDGCHC 5 cut(s) 212, 415, 750, 2521, 2576
MlsI TGGCCA 3 cut(s) 506, 2161, 2312
MluNI TGGCCA 3 cut(s) 506, 2161, 2312
MlyI GAGTC 2 cut(s) 1834, 2228
MmeI TCCRAC 3 cut(s) 421, 1738, 2322
Mox20I TGGCCA 3 cut(s) 506, 2161, 2312
MroXI GAANNNNTTC 1 cut(s) 2139
MscI TGGCCA 3 cut(s) 506, 2161, 2312
Msp20I TGGCCA 3 cut(s) 506, 2161, 2312
MspA1I CMGCKG 1 cut(s) 1330
MspI CCGG 7 cut(s) 212, 314, 611, 759, 1067, 2132, 2482
MspR9I CCNGG 6 cut(s) 212, 315, 1068, 1754, 2096, 2132
MunI CAATTG 2 cut(s) 244, 2072
Mva1269I GAATGC 3 cut(s) 579, 1345, 2501
MvaI CCWGG 2 cut(s) 1754, 2096
MwoI GCNNNNNNNGC 7 cut(s) 55, 77, 86, 634, 728, 1529, 2167
NciI CCSGG 4 cut(s) 212, 315, 1068, 2132
NdeI CATATG 1 cut(s) 1174
NlaIII CATG 7 cut(s) 793, 1033, 2011, 2216, 2662, 2680, 2716
NmeAIII GCCGAG 2 cut(s) 1447, 1691
NmuCI GTSAC 4 cut(s) 235, 280, 656, 1494
NspI RCATGY 2 cut(s) 1033, 2680
NspV TTCGAA 1 cut(s) 225
PaeI GCATGC 1 cut(s) 2680
PaqCI CACCTGC 1 cut(s) 248
PceI AGGCCT 2 cut(s) 1709, 2653
PciI ACATGT 1 cut(s) 1029
PciSI GCTCTTC 2 cut(s) 1068, 2625
PcsI WCGNNNNNNNCGW 1 cut(s) 231
PctI GAATGC 3 cut(s) 579, 1345, 2501
PdmI GAANNNNTTC 1 cut(s) 2139
PfeI GAWTC 8 cut(s) 222, 263, 818, 1395, 1647, 1776, 1981, 2879
PflMI CCANNNNNTGG 1 cut(s) 2707
PkrI GCNGC 6 cut(s) 977, 1457, 1855, 1956, 2057, 2644
PleI GAGTC 2 cut(s) 1834, 2227
PmaCI CACGTG 1 cut(s) 2117
PmlI CACGTG 1 cut(s) 2117
PpsI GAGTC 2 cut(s) 1834, 2227
Ppu21I YACGTR 1 cut(s) 2117
PscI ACATGT 1 cut(s) 1029
Psp6I CCWGG 2 cut(s) 1752, 2094
PspCI CACGTG 1 cut(s) 2117
PspFI CCCAGC 2 cut(s) 1613, 1873
PspGI CCWGG 2 cut(s) 1752, 2094
PspOMI GGGCCC 1 cut(s) 746
PsuI RGATCY 3 cut(s) 1596, 1681, 2716
PvuII CAGCTG 1 cut(s) 1330
RsaI GTAC 6 cut(s) 250, 1028, 1100, 2093, 2445, 2547
RsaNI GTAC 6 cut(s) 249, 1027, 1099, 2092, 2444, 2546
SapI GCTCTTC 2 cut(s) 1068, 2625
SatI GCNGC 6 cut(s) 976, 1456, 1854, 1955, 2056, 2643
SchI GAGTC 2 cut(s) 1834, 2228
ScrFI CCNGG 6 cut(s) 212, 315, 1068, 1754, 2096, 2132
SduI GDGCHC 5 cut(s) 212, 415, 750, 2521, 2576
SfaNI GCATC 6 cut(s) 220, 771, 1244, 1641, 2042, 2382
SfcI CTRYAG 4 cut(s) 1041, 1275, 1677, 1743
SfuI TTCGAA 1 cut(s) 225
SinI GGWCC 4 cut(s) 702, 812, 1158, 1904
SmlI CTYRAG 1 cut(s) 836
SmoI CTYRAG 1 cut(s) 836
SpeI ACTAGT 2 cut(s) 1498, 2554
SphI GCATGC 1 cut(s) 2680
SseBI AGGCCT 2 cut(s) 1709, 2653
SsiI CCGC 6 cut(s) 326, 373, 871, 1122, 1668, 1700
SspI AATATT 1 cut(s) 883
StuI AGGCCT 2 cut(s) 1709, 2653
StyD4I CCNGG 6 cut(s) 210, 313, 1066, 1752, 2094, 2130
StyI CCWWGG 3 cut(s) 1590, 2564, 2828
TaaI ACNGT 3 cut(s) 271, 1405, 1939
TaiI ACGT 4 cut(s) 282, 1348, 2119, 2547
TaqI TCGA 4 cut(s) 225, 510, 2242, 2729
TatI WGTACW 2 cut(s) 1026, 2443
TfiI GAWTC 8 cut(s) 222, 263, 818, 1395, 1647, 1776, 1981, 2879
TscAI CASTG 9 cut(s) 172, 274, 867, 1147, 1252, 1573, 1633, 2464, 2673
TseFI GTSAC 4 cut(s) 235, 280, 656, 1494
TseI GCWGC 6 cut(s) 975, 1455, 1853, 1954, 2055, 2642
Tsp45I GTSAC 4 cut(s) 235, 280, 656, 1494
TspGWI ACGGA 1 cut(s) 1589
TspRI CASTG 9 cut(s) 172, 274, 867, 1147, 1252, 1573, 1633, 2464, 2673
Van91I CCANNNNNTGG 1 cut(s) 2707
VpaK11BI GGWCC 4 cut(s) 702, 812, 1158, 1904
XagI CCTNNNNNAGG 2 cut(s) 1641, 2213
XapI RAATTY 5 cut(s) 160, 307, 966, 1147, 1988
XbaI TCTAGA 2 cut(s) 709, 1304
XceI RCATGY 2 cut(s) 1033, 2680
XcmI CCANNNNNNNNNTGG 3 cut(s) 1115, 1588, 2665
XmnI GAANNNNTTC 1 cut(s) 2139
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.