pycom11g23690

leucine-rich repeat receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Forward (+)
26672804 .. 26673375
572 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g23690.2

Sequence Viewer

Length: 393 bp
ATGGCCAATCCTCAACTGTACATGAATGCACGCCTTTCTCCCATCTCTCTAACTTATTTTGGGTTTTGTCTGGGAAATGGAAACTACACTGTAAACCTCCATTTTGCAGAGATAATGTTTAGAAATGGCAGAACACATAAAAGCTTGGGAAGGCGCATATTCGATATTTACATTCAGGGAAAACTAGTGAAGAAGGACTTCAATATCATGGATGAAGCTGGTGTGTTTGGTGATGTAGTCATAAGGAACTTTACTGCTCCTGTAACTAATAATACGTTGGAGATTCGTTTATATTGGGCTGGGAAAGGGACGACAGGCGTCCCTATTAAAGGAATCTATGGTCCACTTATTTCAGCTATTTCAATAGACCCAAGTAAGTTTTCATTGATCTGA

Protein Analysis

131

Amino Acids

14.52

Weight (kDa)

9.67

Isoelectric Point (pI)

23.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000292)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53420 AT3G14840
fragaria_vesca FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17850 FvH4_3g17850 FvH4_3g17850 FvH4_3g17850 FvH4_3g17851
malus_domestica MD03G1246600.v1.1 MD06G1045200.v1.1 MD06G1045400.v1.1 MD11G1267800.v1.1 MD11G1267900.v1.1 MD11G1268100.v1.1 MD11G1268300.v1.1 MD11G1268500.v1.1 MD11G1268600.v1.1
prunus_persica Prupe.4G157700_v2.0.a1 Prupe.4G157700_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157900_v2.0.a1 Prupe.4G157900_v2.0.a1 Prupe.4G157900_v2.0.a1
pyrus_communis pycom03g19540 pycom11g23600 pycom11g23630 pycom11g23690 pycom11g23720 pycom11g23730 pycom11g23740 pycom11g23750
rosa_chinensis RchiOBHm_Chr0c40g0503411 RchiOBHm_Chr0c40g0503421 RchiOBHm_Chr5g0029631 RchiOBHm_Chr5g0029661 RchiOBHm_Chr5g0029701 RchiOBHm_Chr5g0029741 RchiOBHm_Chr5g0029771 RchiOBHm_Chr5g0029781 RchiOBHm_Chr5g0029811 RchiOBHm_Chr5g0029851 RchiOBHm_Chr5g0029871 RchiOBHm_Chr5g0029891 RchiOBHm_Chr7g0222221
rosa_laevigata RLG00000017380 RLG00000032873 RLG00000033188 RLG00000033190 RLG00000033192 RLG00000033193 RLG00000033194 RLG00000033196 RLG00000033199 RLG00000033238
rosa_multiflora Rmu_co8359987.1_g000001 Rmu_co8444909.1_g000001 Rmu_sc0001608.1_g000007 Rmu_sc0001608.1_g000009 Rmu_sc0001608.1_g000013 Rmu_sc0001608.1_g000018 Rmu_sc0001608.1_g000023 Rmu_sc0001608.1_g000040 Rmu_sc0003238.1_g000016 Rmu_sc0003368.1_g000026 Rmu_sc0003368.1_g000034 Rmu_sc0003368.1_g000043 Rmu_sc0003368.1_g000047 Rmu_sc0003368.1_g000052 Rmu_sc0003368.1_g000054 Rmu_sc0004963.1_g000001
rosa_roxburghii Rroxscaffold_1G00050080 Rroxscaffold_1G00050090 Rroxscaffold_1G00050110 Rroxscaffold_1G00050120 Rroxscaffold_1G00050180 Rroxscaffold_1G00050190 Rroxscaffold_1G00050220 Rroxscaffold_1G00050270 Rroxscaffold_1G00050300
rosa_rugosa Rorug04G0065200 Rorug05G0114900 Rorug05G0115000 Rorug05G0115100 Rorug05G0120100 Rorug05G0238900
rosa_samantha Rh5AG207800 Rh5AG208000 Rh5AG208300 Rh5AG208400 Rh5AG208800 Rh5AG294900 Rh5AG295000 Rh5AG295400 Rh5CG230400 Rh7AG347800
rosa_wichuraiana Rw0G005370 Rw0G012460 Rw0G019060 Rw5G018910 Rw5G018920 Rw5G018930 Rw5G018940 Rw5G018960 Rw5G018970 Rw5G018980 Rw5G018990 Rw5G019000 Rw7G029840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 3
AcyI GRCGYC 1 cut(s) 318
AfaI GTAC 1 cut(s) 20
AfiI CCNNNNNNNGG 1 cut(s) 329
AgsI TTSAA 2 cut(s) 202, 363
AhlI ACTAGT 1 cut(s) 184
AjuI GAANNNNNNNTTGG 1 cut(s) 364
AluBI AGCT 3 cut(s) 144, 218, 356
AluI AGCT 3 cut(s) 144, 218, 356
AoxI GGCC 1 cut(s) 3
Asp700I GAANNNNTTC 1 cut(s) 197
AspLEI GCGC 1 cut(s) 156
AspS9I GGNCC 1 cut(s) 341
AsuHPI GGTGA 1 cut(s) 242
AvaII GGWCC 1 cut(s) 341
BalI TGGCCA 1 cut(s) 5
BccI CCATC 1 cut(s) 50
BcuI ACTAGT 1 cut(s) 184
BfaI CTAG 1 cut(s) 185
Bme18I GGWCC 1 cut(s) 341
BmgT120I GGNCC 1 cut(s) 341
BoxI GACNNNNGTC 1 cut(s) 317
BsaHI GRCGYC 1 cut(s) 318
Bsc4I CCNNNNNNNGG 1 cut(s) 329
BseGI GGATG 1 cut(s) 217
BseLI CCNNNNNNNGG 1 cut(s) 329
BseYI CCCAGC 1 cut(s) 299
BshFI GGCC 1 cut(s) 5
BslFI GGGAC 2 cut(s) 305, 322
BslI CCNNNNNNNGG 1 cut(s) 329
BsmFI GGGAC 2 cut(s) 305, 322
BsmI GAATGC 1 cut(s) 31
BsnI GGCC 1 cut(s) 5
Bsp1407I TGTACA 1 cut(s) 18
Bsp143I GATC 1 cut(s) 387
BspANI GGCC 1 cut(s) 5
BsrGI TGTACA 1 cut(s) 18
BssMI GATC 1 cut(s) 387
BssNI GRCGYC 1 cut(s) 318
Bst4CI ACNGT 2 cut(s) 18, 91
BstACI GRCGYC 1 cut(s) 318
BstAUI TGTACA 1 cut(s) 18
BstC8I GCNNGC 1 cut(s) 31
BstENI CCTNNNNNAGG 1 cut(s) 327
BstF5I GGATG 1 cut(s) 217
BstHHI GCGC 1 cut(s) 156
BstKTI GATC 1 cut(s) 390
BstMBI GATC 1 cut(s) 387
BstPAI GACNNNNGTC 1 cut(s) 317
BsuRI GGCC 1 cut(s) 5
BtsCI GGATG 1 cut(s) 217
BtsIMutI CAGTG 1 cut(s) 87
Cac8I GCNNGC 1 cut(s) 31
CfoI GCGC 1 cut(s) 156
Cfr13I GGNCC 1 cut(s) 341
CseI GACGC 1 cut(s) 307
Csp6I GTAC 1 cut(s) 19
CviAII CATG 2 cut(s) 22, 208
CviJI RGCY 5 cut(s) 5, 144, 218, 299, 356
CviKI_1 RGCY 5 cut(s) 5, 144, 218, 299, 356
CviQI GTAC 1 cut(s) 19
DpnI GATC 1 cut(s) 389
DpnII GATC 1 cut(s) 387
EaeI YGGCCR 1 cut(s) 3
Eco47I GGWCC 1 cut(s) 341
EcoNI CCTNNNNNAGG 1 cut(s) 327
FaeI CATG 2 cut(s) 25, 211
FaiI YATR 7 cut(s) 23, 138, 158, 209, 242, 292, 339
FalI AAGNNNNNCTT 2 cut(s) 182, 214
FaqI GGGAC 2 cut(s) 305, 322
FatI CATG 2 cut(s) 21, 207
FokI GGATG 1 cut(s) 224
FspBI CTAG 1 cut(s) 185
GlaI GCGC 1 cut(s) 155
GsaI CCCAGC 1 cut(s) 303
HaeIII GGCC 1 cut(s) 5
HgaI GACGC 1 cut(s) 307
HhaI GCGC 1 cut(s) 156
Hin1I GRCGYC 1 cut(s) 318
Hin1II CATG 2 cut(s) 25, 211
Hin6I GCGC 1 cut(s) 154
HinP1I GCGC 1 cut(s) 154
HindIII AAGCTT 1 cut(s) 142
HinfI GANTC 2 cut(s) 283, 333
HphI GGTGA 1 cut(s) 242
Hpy166II GTNNAC 2 cut(s) 94, 344
Hpy188I TCNGA 1 cut(s) 392
Hpy8I GTNNAC 2 cut(s) 94, 344
HpyAV CCTTC 2 cut(s) 144, 187
HpyCH4III ACNGT 2 cut(s) 18, 91
HpyCH4IV ACGT 1 cut(s) 275
HpyCH4V TGCA 2 cut(s) 29, 107
HpySE526I ACGT 1 cut(s) 275
Hsp92I GRCGYC 1 cut(s) 318
Hsp92II CATG 2 cut(s) 25, 211
HspAI GCGC 1 cut(s) 154
Kzo9I GATC 1 cut(s) 387
LmnI GCTCC 1 cut(s) 262
LpnPI CCDG 6 cut(s) 56, 161, 204, 273, 285, 300
MaeI CTAG 1 cut(s) 185
MaeII ACGT 1 cut(s) 275
MaeIII GTNAC 1 cut(s) 262
MalI GATC 1 cut(s) 389
MboI GATC 1 cut(s) 387
MboII GAAGA 1 cut(s) 202
MlsI TGGCCA 1 cut(s) 5
MluNI TGGCCA 1 cut(s) 5
MmeI TCCRAC 1 cut(s) 258
MnlI CCTC 2 cut(s) 21, 107
Mox20I TGGCCA 1 cut(s) 5
MroXI GAANNNNTTC 1 cut(s) 197
MscI TGGCCA 1 cut(s) 5
MseI TTAA 1 cut(s) 327
Msp20I TGGCCA 1 cut(s) 5
Mva1269I GAATGC 1 cut(s) 31
NdeII GATC 1 cut(s) 387
NlaIII CATG 2 cut(s) 25, 211
PctI GAATGC 1 cut(s) 31
PdmI GAANNNNTTC 1 cut(s) 197
PfeI GAWTC 2 cut(s) 283, 333
PshAI GACNNNNGTC 1 cut(s) 317
PspFI CCCAGC 1 cut(s) 299
PspPI GGNCC 1 cut(s) 341
RsaI GTAC 1 cut(s) 20
RsaNI GTAC 1 cut(s) 19
SaqAI TTAA 1 cut(s) 327
Sau3AI GATC 1 cut(s) 387
Sau96I GGNCC 1 cut(s) 341
SetI ASST 5 cut(s) 99, 146, 220, 278, 358
SinI GGWCC 1 cut(s) 341
SpeI ACTAGT 1 cut(s) 184
SspMI CTAG 1 cut(s) 185
TaaI ACNGT 2 cut(s) 18, 91
TaiI ACGT 1 cut(s) 278
TaqI TCGA 1 cut(s) 162
TatI WGTACW 1 cut(s) 18
TfiI GAWTC 2 cut(s) 283, 333
Tru1I TTAA 1 cut(s) 327
Tru9I TTAA 1 cut(s) 327
TscAI CASTG 1 cut(s) 94
TspDTI ATGAA 3 cut(s) 38, 228, 372
TspRI CASTG 1 cut(s) 94
VpaK11BI GGWCC 1 cut(s) 341
XagI CCTNNNNNAGG 1 cut(s) 327
XmnI GAANNNNTTC 1 cut(s) 197
XspI CTAG 1 cut(s) 185
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.