FvH4_3g17851

leucine-rich repeat receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Reverse (-)
11377833 .. 11385121
7289 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g17851.t1

Sequence Viewer

Length: 3006 bp
ATGGGACCACTGCCGGTGCCTGGTCGGGTCAACCGAGCGCGCGCGAGGACCAACGACTCATCGGAGTCTCTGACCGAAAATGGAAGGAGATGTTGGGCCAGGCATCGTTGTGCTCGGCTTGATATGAATTGGGATTGTAAGTGGTTAACCGGCATACCCGAACTTTATGCTGGATCGTCTTTGTTGCTAAGGGTAGTTCACGAAGTTTTGAAAGCTCAGAGTTTGCCGGGAAAACTCCCTCCAGAGTTGATCAGGCTCCGCTATCTCCAAGAAATTGACCTCACCCGTAACTACCTGAACGGTACCATCCCTCCCGAATGGGGTGCCTTGCCACTGATTAACATTTCCCTTGTCGGAAACCGTTTGACAGGTTCTCTACCAGTTGAGCTTGCAAACATCACCACACTGAAAAGTTTGACCATTGATTTCAATAGCTTCTCTGGAGTTCTTCCCGCGGAGCTTGGGAACTTGCCCGGCATAGAAAGAATGCTTCTCACCTCAAACAATTTTATTGGGGAGTTGCCGGAAACATTTGCTCAGCTGACTACACTAACGGATTTTCGGATTAGTGACAATTCCTTTTCTGGGAAGATACCTAATTTTATTCAAAACTGGACAAATCTTGAAAAACTGGCGATTCAGGCTAGTGGCTTGACAGGGCCAATTCCTTCCGGCATTTCTCTTTTGACAAAATTAACTGACTTGAGAATTACTGACTTGAATGGACCTGAATCATCATTTCCTCGGCTTGACAATTTAAAACCAAAGACTCTGATGTTGCGGAATTGCAATATTAGTGACCAGTTACCTATGTATCTTGGGGAAATGACGGGTTTGAAAACTTTAGACCTCAGCTTTAACAAGCTAACCGGAGAAATTCCAAGCAGCTTTTCTGGTCTAGCAAAGGTGCAATACATGTTCTTGACTGGAAATATGCTCACTGGATCCGTGCCAGCTTGGCTGAAAGGAGGCAACATCGATCTTTCATATAACAACTTCACCATCAACTCAGGGGCAGTCAGTTGTCCACCACGAGAAGGCTTGAACTTGTTTGCAAGCTCTTCAAGGGGCAATACTTCATCTGTGTCATGTTTGAAAATTGCAAAATGTCCAGAACCTTTTTACTCTCTCCACATAAATTGTGGAGGAAAAGAAGTAAATGTCACTGGAAACTTCACAAGGGCCAAAATGGCAACATATGAGTATGATTCAGCTCCTTCTGGGCCTTCATCATTTTTCAAAAGCGGTACAAATAAGTGGGCGTCAAGCAACACTGGTTATTTTCCTGACGATAATATAGAAAAAGATACCTTTATCTGGCCTAATTCATCTAGACTCTCTATAACTAATTCATCTGATCAGCTGTATATGGATGCACGCCTTTCTCCTATTTCTCTAACGTATTATGGGTTTTGTCTGGGAATTGGAAGTTACACAGTGAAACTCCATTTTGCCGAAATAATGTTTCAAAATGACACAACATATAGCAGCTTGGGAAGGCGTATATTTGATGTTTACATCCAGGGGTCACTGGTGCTGAAGGATTTTAACATTGCCAGTGAAGCAGGAGGGTTTGGTATACCTATTGTAAAACCCTTCACTGTTAACATAACTAGTAATACCTTGGAGATCCGTTTATATTGGGCTGGAAAAGGAACCACTGGCATCCCTGCTCGAGGAAACTATGGTCCTCTAATCTCTGCTATTTCTGTTGATCCTAACTTTGAACCCCCAATAGAGACCTCGACGGGAGGTGGAGGTGGAGGTGGAGGTGGAGGTGGAATACCTCTAGGTGTAGTGGTTGGAATTGTGGCTGGGGCAATCTTCATTATACTACTTATTGTTGGTATTCTTTGGTGGAAAGGTTTTCTAAGACGAGAAAGGACTCTCGAACAAGATTTGATTGGTGTGGACTTGCAAACTAGTAAGTTTACCTTGAGGCAAATCAAAGCTGCCACAAACGATTTTGACCCAGCTAATAAGATTGGAGAAGGTGGTTTTGGTCCTGTCCACAAGGGCCTTCTATCAGATGGCACCATAATTGCCGTTAAGCAGCTCTCTGCCAAATCAAAGCAAGGGAATCGTGAATTTGTGAATGAGATTGGCATGATTTCTGCTTTGCAACACCCTCATCTTGTTAAGCTATATGGATGCTGCATTGAAGGAAATCAATTATTGCTTGTGTACGAGTACATGGAAAATAATAGTCTTGCGCGCGCTTTGTTTGGCCCAGAAGAAAGTCGGTTAAAGTTAGATTGGCCAACAAGGCACAATATCTGTGTTGGTATTGGAAGAGGTTTGGCCTTCCTCCATGAGGAGTCAAGGTTGAAGATCGTTCATCGAGACATCAAAGCTACTAATGTGCTACTTGATAAAAATCTTTTCCCCAAGATATCTGACTTTGGATTGGCCAAACTTGATGAAGAGGATAATACCCACATAAGCACCCGAATTGCTGGAACTTATGGATATATGGCACCTGAATATGCTATGCGTGGTTATCTAACTGATAAAGCCGATGTTTATAGTTTTGGAATTGTTGTACTGGAAATTGTTAGCGGAAGGAACAATACAACTTACCGGACGAAGGAAGAGTGCTTTTATCTTCTTGACTGGGCACTTGTTCTAAAAGAGAAAGGGAACTTACTGGAACTAGTTGATCCAAGGTTGGGCTCAGACTTTAACAAAGAAGAGATGATGATCACAATCAATGTGGCTCTTCTTTGTACTAATGTCATTGCAGCAGATAGGCCTGCGATGTCTTCAGTGGTGAGCATGCTTGAAGGCAAGGCTTCTGTCCAAGAATTGGTGTCGGATCCAAATGCGTGGAAGGAGGAGATGAATGAAATGAGGAAGCATTTTCAGTCCAATGTTGCAGAAAACATGAGTGAGAATAGTCAGAGGCAAACTATGTCAACCGAAGGGCCTTGGACTGCTTCATCTACATCTGTTAATGATCTTTATCCAGTCAATCCTGATTCAAGTTACTGGGAGAACAGAAATTAG

Protein Analysis

1002

Amino Acids

110.17

Weight (kDa)

6.27

Isoelectric Point (pI)

37.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 130 - 239 4.9e-07 Leucine-rich repeat region
LRR_8 PF13855 256 - 313 1.3e-07 Leucine rich repeat
Malectin PF11721 376 - 569 7e-39 Malectin domain
Pkinase PF00069 659 - 859 9e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 660 - 864 3.3e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000292)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53420 AT3G14840
fragaria_vesca FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17850 FvH4_3g17850 FvH4_3g17850 FvH4_3g17850 FvH4_3g17851
malus_domestica MD03G1246600.v1.1 MD06G1045200.v1.1 MD06G1045400.v1.1 MD11G1267800.v1.1 MD11G1267900.v1.1 MD11G1268100.v1.1 MD11G1268300.v1.1 MD11G1268500.v1.1 MD11G1268600.v1.1
prunus_persica Prupe.4G157700_v2.0.a1 Prupe.4G157700_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157900_v2.0.a1 Prupe.4G157900_v2.0.a1 Prupe.4G157900_v2.0.a1
pyrus_communis pycom03g19540 pycom11g23600 pycom11g23630 pycom11g23690 pycom11g23720 pycom11g23730 pycom11g23740 pycom11g23750
rosa_chinensis RchiOBHm_Chr0c40g0503411 RchiOBHm_Chr0c40g0503421 RchiOBHm_Chr5g0029631 RchiOBHm_Chr5g0029661 RchiOBHm_Chr5g0029701 RchiOBHm_Chr5g0029741 RchiOBHm_Chr5g0029771 RchiOBHm_Chr5g0029781 RchiOBHm_Chr5g0029811 RchiOBHm_Chr5g0029851 RchiOBHm_Chr5g0029871 RchiOBHm_Chr5g0029891 RchiOBHm_Chr7g0222221
rosa_laevigata RLG00000017380 RLG00000032873 RLG00000033188 RLG00000033190 RLG00000033192 RLG00000033193 RLG00000033194 RLG00000033196 RLG00000033199 RLG00000033238
rosa_multiflora Rmu_co8359987.1_g000001 Rmu_co8444909.1_g000001 Rmu_sc0001608.1_g000007 Rmu_sc0001608.1_g000009 Rmu_sc0001608.1_g000013 Rmu_sc0001608.1_g000018 Rmu_sc0001608.1_g000023 Rmu_sc0001608.1_g000040 Rmu_sc0003238.1_g000016 Rmu_sc0003368.1_g000026 Rmu_sc0003368.1_g000034 Rmu_sc0003368.1_g000043 Rmu_sc0003368.1_g000047 Rmu_sc0003368.1_g000052 Rmu_sc0003368.1_g000054 Rmu_sc0004963.1_g000001
rosa_roxburghii Rroxscaffold_1G00050080 Rroxscaffold_1G00050090 Rroxscaffold_1G00050110 Rroxscaffold_1G00050120 Rroxscaffold_1G00050180 Rroxscaffold_1G00050190 Rroxscaffold_1G00050220 Rroxscaffold_1G00050270 Rroxscaffold_1G00050300
rosa_rugosa Rorug04G0065200 Rorug05G0114900 Rorug05G0115000 Rorug05G0115100 Rorug05G0120100 Rorug05G0238900
rosa_samantha Rh5AG207800 Rh5AG208000 Rh5AG208300 Rh5AG208400 Rh5AG208800 Rh5AG294900 Rh5AG295000 Rh5AG295400 Rh5CG230400 Rh7AG347800
rosa_wichuraiana Rw0G005370 Rw0G012460 Rw0G019060 Rw5G018910 Rw5G018920 Rw5G018930 Rw5G018940 Rw5G018960 Rw5G018970 Rw5G018980 Rw5G018990 Rw5G019000 Rw7G029840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 302
AccB1I GGYRCC 5 cut(s) 16, 302, 323, 2033, 2476
AccB7I CCANNNNNTGG 1 cut(s) 2806
AccI GTMKAC 1 cut(s) 1579
AccII CGCG 6 cut(s) 40, 42, 44, 455, 2215, 2217
AciI CCGC 6 cut(s) 259, 453, 455, 781, 1245, 2559
AclWI GGATC 8 cut(s) 181, 939, 952, 1624, 1709, 2654, 2810, 2823
AcoI YGGCCR 2 cut(s) 2258, 2409
AcsI RAATTY 2 cut(s) 876, 2087
AcuI CTGAAG 2 cut(s) 1559, 2748
AcyI GRCGYC 1 cut(s) 1262
AfaI GTAC 6 cut(s) 304, 1249, 2186, 2192, 2544, 2728
AflIII ACRYGT 1 cut(s) 915
AhlI ACTAGT 3 cut(s) 1613, 1922, 2653
AjnI CCWGG 3 cut(s) 19, 98, 1521
AjuI GAANNNNNNNTTGG 6 cut(s) 76, 108, 874, 906, 1983, 2015
Alw21I GWGCWC 1 cut(s) 115
Alw26I GTCTC 3 cut(s) 72, 1733, 2337
AlwI GGATC 8 cut(s) 181, 939, 952, 1624, 1709, 2654, 2810, 2823
Ama87I CYCGRG 1 cut(s) 1674
ApeKI GCWGC 6 cut(s) 885, 1488, 1952, 2053, 2154, 2741
ApoI RAATTY 2 cut(s) 876, 2087
Asp718I GGTACC 1 cut(s) 302
AspLEI GCGC 6 cut(s) 40, 42, 44, 2215, 2217, 2219
AsuC2I CCSGG 2 cut(s) 228, 474
AsuHPI GGTGA 5 cut(s) 274, 391, 487, 991, 2782
AvaI CYCGRG 1 cut(s) 1674
AvaII GGWCC 5 cut(s) 5, 48, 725, 1688, 2003
BaeGI GKGCMC 1 cut(s) 2620
BaeI ACNNNNGTAYC 2 cut(s) 797, 830
BalI TGGCCA 2 cut(s) 2260, 2411
BamHI GGATCC 2 cut(s) 944, 2815
BanI GGYRCC 5 cut(s) 16, 302, 323, 2033, 2476
BanII GRGCYC 1 cut(s) 2675
BarI GAAGNNNNNNTAC 2 cut(s) 2554, 2586
BauI CACGAG 1 cut(s) 1032
BbsI GAAGAC 1 cut(s) 2754
Bbv12I GWGCWC 1 cut(s) 115
BbvCI CCTCAGC 1 cut(s) 851
BbvI GCAGC 6 cut(s) 897, 1500, 1939, 2065, 2141, 2753
BccI CCATC 3 cut(s) 314, 1010, 2024
BceAI ACGGC 1 cut(s) 2030
BcgI CGANNNNNNTGC 6 cut(s) 149, 183, 305, 339, 2063, 2097
BciT130I CCWGG 3 cut(s) 21, 100, 1523
BclI TGATCA 3 cut(s) 249, 1357, 2700
BcnI CCSGG 2 cut(s) 228, 474
BcoDI GTCTC 3 cut(s) 72, 1733, 2337
BcuI ACTAGT 3 cut(s) 1613, 1922, 2653
BfaI CTAG 7 cut(s) 645, 899, 1332, 1614, 1790, 1923, 2654
BglI GCCNNNNNGGC 3 cut(s) 958, 1190, 2266
BisI GCNGC 6 cut(s) 886, 1489, 1953, 2054, 2155, 2742
BlpI GCTNAGC 1 cut(s) 537
BlsI GCNGC 6 cut(s) 887, 1490, 1954, 2055, 2156, 2743
Bme1390I CCNGG 5 cut(s) 21, 100, 228, 474, 1523
Bme18I GGWCC 5 cut(s) 5, 48, 725, 1688, 2003
BmeT110I CYCGRG 1 cut(s) 1674
BmrFI CCNGG 5 cut(s) 21, 100, 228, 474, 1523
BmrI ACTGGG 2 cut(s) 2623, 2998
BmsI GCATC 4 cut(s) 112, 1363, 1674, 2141
BmuI ACTGGG 2 cut(s) 2623, 2998
BpiI GAAGAC 1 cut(s) 2754
BpmI CTGGAG 2 cut(s) 225, 462
Bpu10I CCTNAGC 2 cut(s) 188, 851
Bpu1102I GCTNAGC 1 cut(s) 537
BpuEI CTTGAG 2 cut(s) 724, 1957
BpuMI CCSGG 2 cut(s) 228, 474
Bsa29I ATCGAT 1 cut(s) 978
BsaBI GATNNNNATC 4 cut(s) 2376, 2699, 2705, 2961
BsaHI GRCGYC 1 cut(s) 1262
BsaI GGTCTC 1 cut(s) 1733
BsaJI CCNNGG 6 cut(s) 453, 743, 1522, 1623, 2663, 2927
BsaWI WCCGGW 2 cut(s) 869, 2580
BsaXI ACNNNNNCTCC 4 cut(s) 295, 325, 2309, 2339
Bse118I RCCGGY 2 cut(s) 13, 149
Bse3DI GCAATG 2 cut(s) 1551, 2736
Bse8I GATNNNNATC 4 cut(s) 2376, 2699, 2705, 2961
BseBI CCWGG 3 cut(s) 21, 100, 1523
BseCI ATCGAT 1 cut(s) 978
BseDI CCNNGG 6 cut(s) 453, 743, 1522, 1623, 2663, 2927
BseGI GGATG 5 cut(s) 306, 1378, 1518, 1665, 2156
BseJI GATNNNNATC 4 cut(s) 2376, 2699, 2705, 2961
BseMI GCAATG 2 cut(s) 1551, 2736
BseMII CTCAG 5 cut(s) 230, 551, 865, 1023, 2688
BsePI GCGCGC 4 cut(s) 38, 40, 2213, 2215
BseRI GAGGAG 2 cut(s) 2330, 2849
BseSI GKGCMC 1 cut(s) 2620
BseXI GCAGC 6 cut(s) 897, 1500, 1939, 2065, 2141, 2753
BseYI CCCAGC 2 cut(s) 1814, 1972
Bsh1236I CGCG 6 cut(s) 40, 42, 44, 455, 2215, 2217
BshNI GGYRCC 5 cut(s) 16, 302, 323, 2033, 2476
BshVI ATCGAT 1 cut(s) 978
BsiHKAI GWGCWC 1 cut(s) 115
BsiHKCI CYCGRG 1 cut(s) 1674
BsiSI CCGG 8 cut(s) 14, 150, 227, 474, 524, 672, 870, 2581
BslFI GGGAC 1 cut(s) 18
BsmAI GTCTC 3 cut(s) 72, 1733, 2337
BsmFI GGGAC 1 cut(s) 18
BsmI GAATGC 1 cut(s) 492
Bso31I GGTCTC 1 cut(s) 1733
BsoBI CYCGRG 1 cut(s) 1674
Bsp1286I GDGCHC 3 cut(s) 115, 2620, 2675
Bsp1720I GCTNAGC 1 cut(s) 537
BspACI CCGC 6 cut(s) 259, 453, 455, 781, 1245, 2559
BspCNI CTCAG 5 cut(s) 229, 550, 864, 1022, 2687
BspDI ATCGAT 1 cut(s) 978
BspFNI CGCG 6 cut(s) 40, 42, 44, 455, 2215, 2217
BspPI GGATC 8 cut(s) 181, 939, 952, 1624, 1709, 2654, 2810, 2823
BspQI GCTCTTC 2 cut(s) 1066, 2724
BspT107I GGYRCC 5 cut(s) 16, 302, 323, 2033, 2476
BspTNI GGTCTC 1 cut(s) 1733
BsrDI GCAATG 2 cut(s) 1551, 2736
BsrFI RCCGGY 2 cut(s) 13, 149
BssAI RCCGGY 2 cut(s) 13, 149
BssECI CCNNGG 6 cut(s) 453, 743, 1522, 1623, 2663, 2927
BssHII GCGCGC 4 cut(s) 38, 40, 2213, 2215
BssNAI GTATAC 1 cut(s) 1580
BssNI GRCGYC 1 cut(s) 1262
BssSI CACGAG 1 cut(s) 1032
BssT1I CCWWGG 3 cut(s) 1623, 2663, 2927
Bst1107I GTATAC 1 cut(s) 1580
Bst2BI CACGAG 1 cut(s) 1032
Bst2UI CCWGG 3 cut(s) 21, 100, 1523
Bst4CI ACNGT 4 cut(s) 302, 362, 1438, 1603
Bst6I CTCTTC 6 cut(s) 1066, 2287, 2418, 2586, 2685, 2724
BstACI GRCGYC 1 cut(s) 1262
BstDEI CTNAG 7 cut(s) 188, 216, 537, 851, 1009, 1871, 2674
BstDSI CCRYGG 1 cut(s) 453
BstENI CCTNNNNNAGG 2 cut(s) 1674, 2312
BstF5I GGATG 5 cut(s) 306, 1378, 1518, 1665, 2156
BstFNI CGCG 6 cut(s) 40, 42, 44, 455, 2215, 2217
BstHHI GCGC 6 cut(s) 40, 42, 44, 2215, 2217, 2219
BstMAI GTCTC 3 cut(s) 72, 1733, 2337
BstMWI GCNNNNNNNGC 5 cut(s) 641, 958, 1190, 1562, 2266
BstNI CCWGG 3 cut(s) 21, 100, 1523
BstNSI RCATGY 2 cut(s) 919, 2779
BstSCI CCNGG 5 cut(s) 19, 98, 226, 472, 1521
BstSLI GKGCMC 1 cut(s) 2620
BstUI CGCG 6 cut(s) 40, 42, 44, 455, 2215, 2217
BstV1I GCAGC 6 cut(s) 897, 1500, 1939, 2065, 2141, 2753
BstV2I GAAGAC 1 cut(s) 2754
BstX2I RGATCY 3 cut(s) 944, 1629, 2815
BstXI CCANNNNNNTGG 1 cut(s) 2826
BstYI RGATCY 3 cut(s) 944, 1629, 2815
BstZ17I GTATAC 1 cut(s) 1580
Bsu15I ATCGAT 1 cut(s) 978
BsuTUI ATCGAT 1 cut(s) 978
BtgI CCRYGG 1 cut(s) 453
BtgZI GCGATG 1 cut(s) 2771
BtsCI GGATG 5 cut(s) 306, 1378, 1518, 1665, 2156
BtsI GCAGTG 1 cut(s) 8
CfoI GCGC 6 cut(s) 40, 42, 44, 2215, 2217, 2219
Cfr10I RCCGGY 2 cut(s) 13, 149
Cfr42I CCGCGG 1 cut(s) 456
ClaI ATCGAT 1 cut(s) 978
CseI GACGC 1 cut(s) 1251
Csp6I GTAC 6 cut(s) 303, 1248, 2185, 2191, 2543, 2727
CspCI CAANNNNNGTGG 4 cut(s) 1121, 1156, 2694, 2729
CviAII CATG 7 cut(s) 916, 1089, 2107, 2194, 2312, 2776, 2884
CviQI GTAC 6 cut(s) 303, 1248, 2185, 2191, 2543, 2727
DdeI CTNAG 7 cut(s) 188, 216, 537, 851, 1009, 1871, 2674
DraI TTTAAA 1 cut(s) 759
EaeI YGGCCR 2 cut(s) 2258, 2409
Eam1104I CTCTTC 6 cut(s) 1066, 2287, 2418, 2586, 2685, 2724
EarI CTCTTC 6 cut(s) 1066, 2287, 2418, 2586, 2685, 2724
Eco130I CCWWGG 3 cut(s) 1623, 2663, 2927
Eco147I AGGCCT 1 cut(s) 2752
Eco24I GRGCYC 1 cut(s) 2675
Eco31I GGTCTC 1 cut(s) 1733
Eco32I GATATC 1 cut(s) 2394
Eco47I GGWCC 5 cut(s) 5, 48, 725, 1688, 2003
Eco57I CTGAAG 2 cut(s) 1559, 2748
Eco88I CYCGRG 1 cut(s) 1674
EcoNI CCTNNNNNAGG 2 cut(s) 1674, 2312
EcoO109I RGGNCCY 2 cut(s) 2017, 2924
EcoRII CCWGG 3 cut(s) 19, 98, 1521
EcoRV GATATC 1 cut(s) 2394
EcoT14I CCWWGG 3 cut(s) 1623, 2663, 2927
EcoT38I GRGCYC 1 cut(s) 2675
ErhI CCWWGG 3 cut(s) 1623, 2663, 2927
FaeI CATG 7 cut(s) 919, 1092, 2110, 2197, 2315, 2779, 2887
FalI AAGNNNNNCTT 2 cut(s) 1919, 1951
FaqI GGGAC 1 cut(s) 18
FatI CATG 7 cut(s) 915, 1088, 2106, 2193, 2311, 2775, 2883
FauI CCCGC 1 cut(s) 460
FauNDI CATATG 1 cut(s) 1198
FbaI TGATCA 3 cut(s) 249, 1357, 2700
FblI GTMKAC 1 cut(s) 1579
Fnu4HI GCNGC 6 cut(s) 886, 1489, 1953, 2054, 2155, 2742
FokI GGATG 5 cut(s) 293, 1385, 1505, 1652, 2163
FriOI GRGCYC 1 cut(s) 2675
Fsp4HI GCNGC 6 cut(s) 886, 1489, 1953, 2054, 2155, 2742
FspBI CTAG 7 cut(s) 645, 899, 1332, 1614, 1790, 1923, 2654
GlaI GCGC 6 cut(s) 39, 41, 43, 2214, 2216, 2218
GluI GCNGC 6 cut(s) 886, 1489, 1953, 2054, 2155, 2742
GsaI CCCAGC 2 cut(s) 1818, 1976
GsuI CTGGAG 2 cut(s) 225, 462
HapII CCGG 8 cut(s) 14, 150, 227, 474, 524, 672, 870, 2581
HgaI GACGC 1 cut(s) 1251
HhaI GCGC 6 cut(s) 40, 42, 44, 2215, 2217, 2219
Hin1I GRCGYC 1 cut(s) 1262
Hin1II CATG 7 cut(s) 919, 1092, 2110, 2197, 2315, 2779, 2887
Hin6I GCGC 6 cut(s) 38, 40, 42, 2213, 2215, 2217
HinP1I GCGC 6 cut(s) 38, 40, 42, 2213, 2215, 2217
HincII GTYRAC 4 cut(s) 31, 147, 1606, 2916
HindII GTYRAC 4 cut(s) 31, 147, 1606, 2916
HpaI GTTAAC 2 cut(s) 147, 1606
HpaII CCGG 8 cut(s) 14, 150, 227, 474, 524, 672, 870, 2581
HphI GGTGA 5 cut(s) 274, 391, 487, 991, 2782
Hpy99I CGWCG 1 cut(s) 1750
HpyCH4III ACNGT 4 cut(s) 302, 362, 1438, 1603
HpyCH4IV ACGT 1 cut(s) 1400
HpyF10VI GCNNNNNNNGC 5 cut(s) 641, 958, 1190, 1562, 2266
HpyF3I CTNAG 7 cut(s) 188, 216, 537, 851, 1009, 1871, 2674
HpySE526I ACGT 1 cut(s) 1400
Hsp92I GRCGYC 1 cut(s) 1262
Hsp92II CATG 7 cut(s) 919, 1092, 2110, 2197, 2315, 2779, 2887
HspAI GCGC 6 cut(s) 38, 40, 42, 2213, 2215, 2217
KpnI GGTACC 1 cut(s) 306
Ksp22I TGATCA 3 cut(s) 249, 1357, 2700
KspAI GTTAAC 2 cut(s) 147, 1606
KspI CCGCGG 1 cut(s) 456
LguI GCTCTTC 2 cut(s) 1066, 2724
LmnI GCTCC 3 cut(s) 261, 457, 1219
Lsp1109I GCAGC 6 cut(s) 897, 1500, 1939, 2065, 2141, 2753
LweI GCATC 4 cut(s) 112, 1363, 1674, 2141
MaeI CTAG 7 cut(s) 645, 899, 1332, 1614, 1790, 1923, 2654
MaeII ACGT 1 cut(s) 1400
MaeIII GTNAC 8 cut(s) 287, 569, 797, 804, 1162, 1430, 1527, 2984
MauBI CGCGCGCG 1 cut(s) 40
MflI RGATCY 3 cut(s) 944, 1629, 2815
MhlI GDGCHC 3 cut(s) 115, 2620, 2675
MlsI TGGCCA 2 cut(s) 2260, 2411
MluNI TGGCCA 2 cut(s) 2260, 2411
MlyI GAGTC 6 cut(s) 50, 74, 763, 1329, 1879, 2327
MmeI TCCRAC 3 cut(s) 334, 1783, 2793
Mox20I TGGCCA 2 cut(s) 2260, 2411
MscI TGGCCA 2 cut(s) 2260, 2411
MslI CAYNNNNRTG 1 cut(s) 108
Msp20I TGGCCA 2 cut(s) 2260, 2411
MspA1I CMGCKG 3 cut(s) 455, 541, 1363
MspI CCGG 8 cut(s) 14, 150, 227, 474, 524, 672, 870, 2581
MspR9I CCNGG 5 cut(s) 21, 100, 228, 474, 1523
Mva1269I GAATGC 1 cut(s) 492
MvaI CCWGG 3 cut(s) 21, 100, 1523
MvnI CGCG 6 cut(s) 40, 42, 44, 455, 2215, 2217
MwoI GCNNNNNNNGC 5 cut(s) 641, 958, 1190, 1562, 2266
NciI CCSGG 2 cut(s) 228, 474
NdeI CATATG 1 cut(s) 1198
NlaIII CATG 7 cut(s) 919, 1092, 2110, 2197, 2315, 2779, 2887
NmeAIII GCCGAG 2 cut(s) 94, 724
NmuCI GTSAC 4 cut(s) 569, 797, 1162, 1527
NspI RCATGY 2 cut(s) 919, 2779
PaeI GCATGC 1 cut(s) 2779
PaeR7I CTCGAG 1 cut(s) 1674
PauI GCGCGC 4 cut(s) 38, 40, 2213, 2215
PceI AGGCCT 1 cut(s) 2752
PciI ACATGT 1 cut(s) 915
PciSI GCTCTTC 2 cut(s) 1066, 2724
PcsI WCGNNNNNNNCGW 1 cut(s) 31
PctI GAATGC 1 cut(s) 492
PfeI GAWTC 5 cut(s) 637, 731, 1208, 2080, 2978
PflMI CCANNNNNTGG 1 cut(s) 2806
PkrI GCNGC 6 cut(s) 887, 1490, 1954, 2055, 2156, 2743
PleI GAGTC 6 cut(s) 50, 73, 763, 1329, 1879, 2326
PpsI GAGTC 6 cut(s) 50, 73, 763, 1329, 1879, 2326
PscI ACATGT 1 cut(s) 915
Psp6I CCWGG 3 cut(s) 19, 98, 1521
PspFI CCCAGC 2 cut(s) 1814, 1972
PspGI CCWGG 3 cut(s) 19, 98, 1521
PspXI VCTCGAGB 1 cut(s) 1674
PsuI RGATCY 3 cut(s) 944, 1629, 2815
PteI GCGCGC 4 cut(s) 38, 40, 2213, 2215
PvuII CAGCTG 2 cut(s) 541, 1363
RsaI GTAC 6 cut(s) 304, 1249, 2186, 2192, 2544, 2728
RsaNI GTAC 6 cut(s) 303, 1248, 2185, 2191, 2543, 2727
RseI CAYNNNNRTG 1 cut(s) 108
SacII CCGCGG 1 cut(s) 456
SapI GCTCTTC 2 cut(s) 1066, 2724
SatI GCNGC 6 cut(s) 886, 1489, 1953, 2054, 2155, 2742
SchI GAGTC 6 cut(s) 50, 74, 763, 1329, 1879, 2327
ScrFI CCNGG 5 cut(s) 21, 100, 228, 474, 1523
SduI GDGCHC 3 cut(s) 115, 2620, 2675
SfaNI GCATC 4 cut(s) 112, 1363, 1674, 2141
Sfr274I CTCGAG 1 cut(s) 1674
Sfr303I CCGCGG 1 cut(s) 456
SgrBI CCGCGG 1 cut(s) 456
SinI GGWCC 5 cut(s) 5, 48, 725, 1688, 2003
SlaI CTCGAG 1 cut(s) 1674
SmiMI CAYNNNNRTG 1 cut(s) 108
SmlI CTYRAG 3 cut(s) 703, 1674, 1936
SmoI CTYRAG 3 cut(s) 703, 1674, 1936
SpeI ACTAGT 3 cut(s) 1613, 1922, 2653
SphI GCATGC 1 cut(s) 2779
SseBI AGGCCT 1 cut(s) 2752
SsiI CCGC 6 cut(s) 259, 453, 455, 781, 1245, 2559
SspI AATATT 1 cut(s) 793
SspMI CTAG 7 cut(s) 645, 899, 1332, 1614, 1790, 1923, 2654
StuI AGGCCT 1 cut(s) 2752
StyD4I CCNGG 5 cut(s) 19, 98, 226, 472, 1521
StyI CCWWGG 3 cut(s) 1623, 2663, 2927
TaaI ACNGT 4 cut(s) 302, 362, 1438, 1603
TaiI ACGT 1 cut(s) 1403
TaqI TCGA 5 cut(s) 978, 1675, 1745, 1890, 2341
TaqII GACCGA 1 cut(s) 89
TatI WGTACW 3 cut(s) 2190, 2542, 2726
TfiI GAWTC 5 cut(s) 637, 731, 1208, 2080, 2978
TseFI GTSAC 4 cut(s) 569, 797, 1162, 1527
TseI GCWGC 6 cut(s) 885, 1488, 1952, 2053, 2154, 2741
Tsp45I GTSAC 4 cut(s) 569, 797, 1162, 1527
TspGWI ACGGA 3 cut(s) 569, 937, 1622
Van91I CCANNNNNTGG 1 cut(s) 2806
VpaK11BI GGWCC 5 cut(s) 5, 48, 725, 1688, 2003
XagI CCTNNNNNAGG 2 cut(s) 1674, 2312
XapI RAATTY 2 cut(s) 876, 2087
XbaI TCTAGA 1 cut(s) 1331
XceI RCATGY 2 cut(s) 919, 2779
XcmI CCANNNNNNNNNTGG 1 cut(s) 1139
XhoI CTCGAG 1 cut(s) 1674
XmiI GTMKAC 1 cut(s) 1579
XspI CTAG 7 cut(s) 645, 899, 1332, 1614, 1790, 1923, 2654
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.