Rw5G018910

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Reverse (-)
24310127 .. 24325240
15114 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G018910.1

Sequence Viewer

Length: 3096 bp
ATGTTAAACGTTTTGGCCGCCGGCCAAAATATGAGTTACACATTCTTCTTTCGTAGGCTTCTTGTTTATTCTATCTTGCTGGTTATCTTTGCAAGCTTTGCTCTCGGAGCTACTCGATTATCAGAAGTTGAAGTACAAGCTTTAAAGATCATTGGAAAGACATTGGGGAAGGACCGGAATTTCACTGCAGATCCGTGTAGCAGCGAAGCATCTAGATGGATTGATAGTACCTCAACAGACAGCGAAGCTACGAATAACGTCACCTGCGGCAATTGTATTACTGCTGGCGACGATCAGATCTGCCATGTTACAAGCATATCTCTGAAAGCTCAGAATTTGGCAGGAACACTCCCACCAGAGTTGGCGAGGCTTCCCTATCTACAAATAATTGATCTCAACCGCAACTATTTGAATGGCACCATCCCTCAAGAATGGGGCTCCTTGCCACTAGTTACCATTTCCCTTGTTGGAAACCGTTTGACAGGTTCTATCCCCATTGAGATCGGAAACATAAGCACCCTGCAAAGTTTGGACATCACTGCCAATAATTTTTCAGGACTGCTTCCTCTGGAGCTTGGGAATTTAACCAGCATAGACAGAATGCTTCTTTCCTCGAACAATTTTACTGGGAAGTTGCCCGAAACATTTGCAAGGCTTACCACATTAACGGACTTTCGGGTTGGTGACAGTAACTTTTCTGGGAAGATACCTGATTTCATTCAGAACTGGAAAAATCTTTCAAAACTAGTCATTCAGGCTAGTGGTTTGACTGGGCCAATTCCATCCAACATTTCTGTTTTGAAGAAATTAACTGACCTGAGAATTACTGACTTGGATGGACCTGAAGCACCTTTTCCTCAACTTGATAATATGAAAAATCTGAAAACACTGATGTTGAGGAATTGCAATCTTACTGGAGAACTACCTAAGTATCTTGCAGATATGACAGAGTTGAAAACCTTAGACCTCAGCTTTAACAAGCTTACTGGGAACATTCCAAGCTCCTTTGTTAATAAAGATGGTTTGGAGAACATGTTCTTAACTGGAAACTTGCTGGATGGAACACTGCCTGAATCGCAGAAAAGAAACAACATTGATCTTTCATACAACAACATGACCACTAGTGAGACCGACGGTTGTGGCGGTGGCGGCAGAAATTTTTTTGCAAGCTCGTCAAAGGGAAATAAGTCAATTATTTCATGTTTGAATATTGAAACATGTCCGAAAGAGTCGTACTCTCTCCGTATAAATTGTGGTGGAAAAAAAATAACTGTTACAGAAAATATCACCGAGTCCATAACATATGAAGCAGATGACAATTCAGGTGGTCCTTCATCATTTTACAAAGTAGGAAGCAATTGGGGGTTTAGCAGCACTGGTTACTACCCTGATGATGACCATCCTCAAGACATCTTTATTGTGTCTAATGAATCTGCACTCTCTACGCCCGATCCTATGACCGATCCTCAGCTGTACATGACGGCACGCGTTTCACCCATCTCTCTTACTTATGTTGGGTTCTGCCTGATGAATGGAAACTACACAGTGAAGCTCCATTTTGCAGAGATAATGTTTACAAATGGCAAGACATATCGTAGCTTGGGAAGACGTATATTTGATGTCTACATTCAGGGGAAACGAGTGCAGAAGGATTTTAATATTGCGGATGTAGCAGGTGGGAATGGTAAATTAGTCATAAGAAACTATACCGCTTCTGTAACAAATCATACCTTGGAGATTCGTTTCTTTTGGAACGGGAAAGGAACACAGGTTATCCCTACTAGAGGAGTCTATGGTCCTCTTATATCTGGCATTTTTGTCGACCCATTTGATTTTACACCCCCGAAAGAACCCTCGCTAGGAAGTGGTATATTGGCAGGTGAAGTCGTTGGAATTGTGGCTGGAGGAGTGTCCATAATATTAGTGATTTTATGTATTCTCTGGTGGAAAGGCTTCATAGGACCACCAAATACTTTGGAACAAGATTTGAAGGGTGTGGAACTGCAGACTGGCAAATTTACCTTGAGGCAAATCAAAACTGCCACGAACAACTTTGACATAGCGAACAAGATTGGAGAAGGTGGTTTTGGTCCTGTTTACAGGGGCCTTCTATCAGACAACACTGCAATTGCTGTTAAGAAGCTTTCAGCCAAATCGAAGCAAGGGAATCGTGAATTTGTGAATGAGATAGGCATGATTTCTGCTCTGCAACACCCTCACCTTGTCAAGCTTTATGGATGCTGTATTGAAGGAAATAACTTGTTGCTTGTCTATGAGTACATGGAAAACAATAGTCTCGCACGTGCTCTATTTGGCCCAAAGGAAAGTCAGGTGAAGTTGGGCTGGCCAACAAGGCATAGTATTTGTGTTGGTATAGCCAGAGGTTTGGCTTACCTCCATGAGGAATCAAGGTTGAAGATCGTTCATAGAGACATCAAAGCTACTAATGTGCTACTTGATAAAAATCTTTTCCCAAAGATATCTGACTTTGGATTGGCCAAGCTTGATGAAGACGATAATACCCACATAAGCACTCGGATTGCTGGAACTTTTGGTTATATGGCACCTGAATATGCAATGCGGGGTTATTTGACTGATAAAGCAGATGTTTATAGTTTCGGAATTCTTGTATTGGAAATGATCGGTGGAAGGTGCAATACAACTTACCGCTCAAAGGAAGAATGTTTTTATCTTCTAGATTGGGCACTTCTTCTAAAAGAGAGAGCAAGTTTGTTGGACCTGGTGGATCCAAGGTTGGGCTCAGAGTTTAACAAAGAAGAGATGATTACTACTATCAATATAGCTCTCCTTTGTGCTAATGCTTCTTCAGCAGTTAGGCCCGCCATGTCTTCAGTGGTGAGCATGCTTGAAGGTAGAGCTTCTGTTCAGGAGGTGGTCTTTGATCCAAATGCCTCAATTAATGAAATCAATGCGATGAGGAAACATTTTCAATCCACTATTGGAGAAAACAATGGTGACCCTGAGAGTCAGAGACAAACTATGTCAATTGAAGGGTCGTGGACTGCTTCATCTACATCTGCTCAAGACCTCTATCCGGTCCGCCCTAATTCATATTATTTTGAGAATAGAAATTAG

Protein Analysis

1031

Amino Acids

113.34

Weight (kDa)

5.94

Isoelectric Point (pI)

33.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 168 - 276 3.9e-06 Leucine-rich repeat region
LRR_4 PF12799 292 - 329 8.3e-06 Leucine Rich repeats (2 copies)
LRR_8 PF13855 293 - 352 1.8e-06 Leucine rich repeat
Malectin PF11721 413 - 605 6.7e-43 Malectin domain
PK_Tyr_Ser-Thr PF07714 687 - 886 3.6e-47 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 687 - 885 1.6e-44 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000292)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53420 AT3G14840
fragaria_vesca FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17850 FvH4_3g17850 FvH4_3g17850 FvH4_3g17850 FvH4_3g17851
malus_domestica MD03G1246600.v1.1 MD06G1045200.v1.1 MD06G1045400.v1.1 MD11G1267800.v1.1 MD11G1267900.v1.1 MD11G1268100.v1.1 MD11G1268300.v1.1 MD11G1268500.v1.1 MD11G1268600.v1.1
prunus_persica Prupe.4G157700_v2.0.a1 Prupe.4G157700_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157900_v2.0.a1 Prupe.4G157900_v2.0.a1 Prupe.4G157900_v2.0.a1
pyrus_communis pycom03g19540 pycom11g23600 pycom11g23630 pycom11g23690 pycom11g23720 pycom11g23730 pycom11g23740 pycom11g23750
rosa_chinensis RchiOBHm_Chr0c40g0503411 RchiOBHm_Chr0c40g0503421 RchiOBHm_Chr5g0029631 RchiOBHm_Chr5g0029661 RchiOBHm_Chr5g0029701 RchiOBHm_Chr5g0029741 RchiOBHm_Chr5g0029771 RchiOBHm_Chr5g0029781 RchiOBHm_Chr5g0029811 RchiOBHm_Chr5g0029851 RchiOBHm_Chr5g0029871 RchiOBHm_Chr5g0029891 RchiOBHm_Chr7g0222221
rosa_laevigata RLG00000017380 RLG00000032873 RLG00000033188 RLG00000033190 RLG00000033192 RLG00000033193 RLG00000033194 RLG00000033196 RLG00000033199 RLG00000033238
rosa_multiflora Rmu_co8359987.1_g000001 Rmu_co8444909.1_g000001 Rmu_sc0001608.1_g000007 Rmu_sc0001608.1_g000009 Rmu_sc0001608.1_g000013 Rmu_sc0001608.1_g000018 Rmu_sc0001608.1_g000023 Rmu_sc0001608.1_g000040 Rmu_sc0003238.1_g000016 Rmu_sc0003368.1_g000026 Rmu_sc0003368.1_g000034 Rmu_sc0003368.1_g000043 Rmu_sc0003368.1_g000047 Rmu_sc0003368.1_g000052 Rmu_sc0003368.1_g000054 Rmu_sc0004963.1_g000001
rosa_roxburghii Rroxscaffold_1G00050080 Rroxscaffold_1G00050090 Rroxscaffold_1G00050110 Rroxscaffold_1G00050120 Rroxscaffold_1G00050180 Rroxscaffold_1G00050190 Rroxscaffold_1G00050220 Rroxscaffold_1G00050270 Rroxscaffold_1G00050300
rosa_rugosa Rorug04G0065200 Rorug05G0114900 Rorug05G0115000 Rorug05G0115100 Rorug05G0120100 Rorug05G0238900
rosa_samantha Rh5AG207800 Rh5AG208000 Rh5AG208300 Rh5AG208400 Rh5AG208800 Rh5AG294900 Rh5AG295000 Rh5AG295400 Rh5CG230400 Rh7AG347800
rosa_wichuraiana Rw0G005370 Rw0G012460 Rw0G019060 Rw5G018910 Rw5G018920 Rw5G018930 Rw5G018940 Rw5G018960 Rw5G018970 Rw5G018980 Rw5G018990 Rw5G019000 Rw7G029840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 3 cut(s) 272, 1664, 1868
Acc36I ACCTGC 3 cut(s) 272, 1664, 1868
AccB1I GGYRCC 2 cut(s) 416, 2563
AccBSI CCGCTC 1 cut(s) 2670
AccI GTMKAC 2 cut(s) 1623, 1821
AccII CGCG 1 cut(s) 1488
AclI AACGTT 1 cut(s) 9
AclWI GGATC 6 cut(s) 185, 1445, 1457, 2741, 2754, 2897
AcoI YGGCCR 4 cut(s) 15, 22, 2345, 2496
AcsI RAATTY 7 cut(s) 178, 334, 580, 1156, 2015, 2174, 2622
AcuI CTGAAG 3 cut(s) 864, 2811, 2835
AcvI CACGTG 1 cut(s) 2303
AfaI GTAC 5 cut(s) 135, 229, 1235, 1475, 2279
AfiI CCNNNNNNNGG 6 cut(s) 1784, 1859, 2401, 2674, 2756, 3055
AflIII ACRYGT 3 cut(s) 1032, 1217, 1486
AhlI ACTAGT 3 cut(s) 448, 745, 1121
AjnI CCWGG 1 cut(s) 2739
AjuI GAANNNNNNNTTGG 2 cut(s) 2070, 2102
AloI GAACNNNNNNTCC 2 cut(s) 1019, 1051
Alw21I GWGCWC 1 cut(s) 2308
Alw26I GTCTC 4 cut(s) 1121, 2300, 2424, 2986
AlwI GGATC 6 cut(s) 185, 1445, 1457, 2741, 2754, 2897
AoxI GGCC 8 cut(s) 15, 22, 773, 2104, 2314, 2345, 2496, 2837
ApeKI GCWGC 2 cut(s) 201, 1371
ApoI RAATTY 7 cut(s) 178, 334, 580, 1156, 2015, 2174, 2622
AseI ATTAAT 1 cut(s) 2919
Asp700I GAANNNNTTC 2 cut(s) 1034, 1952
AsuHPI GGTGA 9 cut(s) 253, 695, 1279, 1485, 1892, 2210, 2344, 2869, 2987
AvaII GGWCC 8 cut(s) 172, 839, 1328, 1796, 1961, 2090, 2737, 3058
BaeGI GKGCMC 1 cut(s) 2707
BaeI ACNNNNGTAYC 2 cut(s) 914, 947
BalI TGGCCA 2 cut(s) 2347, 2498
BamHI GGATCC 1 cut(s) 2746
BanI GGYRCC 2 cut(s) 416, 2563
BanII GRGCYC 2 cut(s) 440, 2762
BarI GAAGNNNNNNTAC 4 cut(s) 117, 149, 2641, 2673
BbrPI CACGTG 1 cut(s) 2303
BbsI GAAGAC 3 cut(s) 1612, 2517, 2841
Bbv12I GWGCWC 1 cut(s) 2308
BbvCI CCTCAGC 2 cut(s) 968, 1467
BbvI GCAGC 2 cut(s) 213, 1383
BccI CCATC 8 cut(s) 210, 428, 790, 830, 1013, 1052, 1407, 1505
BceAI ACGGC 1 cut(s) 1497
BcgI CGANNNNNNTGC 6 cut(s) 629, 663, 1801, 1835, 2150, 2184
BciT130I CCWGG 1 cut(s) 2741
BcoDI GTCTC 4 cut(s) 1121, 2300, 2424, 2986
BcuI ACTAGT 3 cut(s) 448, 745, 1121
BfaI CTAG 8 cut(s) 213, 449, 746, 759, 1122, 1782, 1859, 2696
BfmI CTRYAG 2 cut(s) 186, 2003
BfuAI ACCTGC 3 cut(s) 272, 1664, 1868
BglI GCCNNNNNGGC 1 cut(s) 2353
BglII AGATCT 1 cut(s) 297
BisI GCNGC 5 cut(s) 18, 202, 268, 1150, 1372
BlsI GCNGC 5 cut(s) 19, 203, 269, 1151, 1373
Bme1390I CCNGG 1 cut(s) 2741
Bme18I GGWCC 8 cut(s) 172, 839, 1328, 1796, 1961, 2090, 2737, 3058
BmiI GGNNCC 5 cut(s) 418, 439, 2105, 2565, 2748
BmrFI CCNGG 1 cut(s) 2741
BmrI ACTGGG 3 cut(s) 636, 780, 996
BmsI GCATC 2 cut(s) 218, 2228
BmuI ACTGGG 3 cut(s) 636, 780, 996
BpiI GAAGAC 3 cut(s) 1612, 2517, 2841
BplI GAGNNNNNCTC 2 cut(s) 1220, 1252
BpmI CTGGAG 3 cut(s) 590, 936, 1923
Bpu10I CCTNAGC 2 cut(s) 968, 1467
BpuEI CTTGAG 4 cut(s) 411, 1389, 2044, 3027
BsaAI YACGTR 1 cut(s) 2303
BsaBI GATNNNNATC 2 cut(s) 1398, 2463
BsaI GGTCTC 1 cut(s) 1121
BsaJI CCNNGG 2 cut(s) 1731, 2750
BsaWI WCCGGW 2 cut(s) 174, 3055
BsaXI ACNNNNNCTCC 2 cut(s) 1019, 1049
Bsc4I CCNNNNNNNGG 6 cut(s) 1784, 1859, 2401, 2674, 2756, 3055
Bse118I RCCGGY 1 cut(s) 20
Bse1I ACTGG 8 cut(s) 631, 731, 775, 919, 991, 1048, 1381, 2014
Bse3DI GCAATG 1 cut(s) 2583
Bse8I GATNNNNATC 2 cut(s) 1398, 2463
BseBI CCWGG 1 cut(s) 2741
BseDI CCNNGG 2 cut(s) 1731, 2750
BseGI GGATG 7 cut(s) 420, 782, 841, 1063, 1399, 1672, 2243
BseJI GATNNNNATC 2 cut(s) 1398, 2463
BseLI CCNNNNNNNGG 6 cut(s) 1784, 1859, 2401, 2674, 2756, 3055
BseMI GCAATG 1 cut(s) 2583
BseMII CTCAG 6 cut(s) 344, 809, 982, 1481, 2775, 2973
BseNI ACTGG 8 cut(s) 631, 731, 775, 919, 991, 1048, 1381, 2014
BseRI GAGGAG 2 cut(s) 1800, 1920
BseSI GKGCMC 1 cut(s) 2707
BseXI GCAGC 2 cut(s) 213, 1383
BsgI GTGCAG 2 cut(s) 1419, 1664
Bsh1236I CGCG 1 cut(s) 1488
BshFI GGCC 8 cut(s) 17, 24, 775, 2106, 2316, 2347, 2498, 2839
BshNI GGYRCC 2 cut(s) 416, 2563
BsiHKAI GWGCWC 1 cut(s) 2308
BsiSI CCGG 3 cut(s) 21, 175, 3056
BslI CCNNNNNNNGG 6 cut(s) 1784, 1859, 2401, 2674, 2756, 3055
BsmAI GTCTC 4 cut(s) 1121, 2300, 2424, 2986
BsmI GAATGC 1 cut(s) 606
BsnI GGCC 8 cut(s) 17, 24, 775, 2106, 2316, 2347, 2498, 2839
Bso31I GGTCTC 1 cut(s) 1121
Bsp1286I GDGCHC 4 cut(s) 440, 2308, 2707, 2762
Bsp1407I TGTACA 1 cut(s) 1473
BspANI GGCC 8 cut(s) 17, 24, 775, 2106, 2316, 2347, 2498, 2839
BspCNI CTCAG 6 cut(s) 343, 810, 981, 1480, 2774, 2974
BspFNI CGCG 1 cut(s) 1488
BspLI GGNNCC 5 cut(s) 418, 439, 2105, 2565, 2748
BspMAI CTGCAG 2 cut(s) 190, 2007
BspMI ACCTGC 3 cut(s) 272, 1664, 1868
BspPI GGATC 6 cut(s) 185, 1445, 1457, 2741, 2754, 2897
BspT107I GGYRCC 2 cut(s) 416, 2563
BspTNI GGTCTC 1 cut(s) 1121
BsrBI CCGCTC 1 cut(s) 2670
BsrDI GCAATG 1 cut(s) 2583
BsrFI RCCGGY 1 cut(s) 20
BsrGI TGTACA 1 cut(s) 1473
BsrI ACTGG 8 cut(s) 631, 731, 775, 919, 991, 1048, 1381, 2014
BssAI RCCGGY 1 cut(s) 20
BssECI CCNNGG 2 cut(s) 1731, 2750
BssT1I CCWWGG 2 cut(s) 1731, 2750
Bst2UI CCWGG 1 cut(s) 2741
Bst4CI ACNGT 5 cut(s) 476, 689, 1136, 1273, 1546
Bst6I CTCTTC 1 cut(s) 2772
BstAPI GCANNNNNTGC 1 cut(s) 98
BstAUI TGTACA 1 cut(s) 1473
BstBAI YACGTR 1 cut(s) 2303
BstC8I GCNNGC 8 cut(s) 22, 94, 286, 1168, 1486, 2345, 2841, 2864
BstDEI CTNAG 8 cut(s) 330, 818, 927, 961, 968, 1467, 2761, 2982
BstEII GGTNACC 1 cut(s) 2975
BstENI CCTNNNNNAGG 2 cut(s) 1782, 2399
BstF5I GGATG 7 cut(s) 420, 782, 841, 1063, 1399, 1672, 2243
BstFNI CGCG 1 cut(s) 1488
BstMAI GTCTC 4 cut(s) 1121, 2300, 2424, 2986
BstMWI GCNNNNNNNGC 7 cut(s) 98, 107, 1075, 1149, 1670, 2353, 2828
BstNI CCWGG 1 cut(s) 2741
BstNSI RCATGY 3 cut(s) 1036, 1221, 2866
BstPI GGTNACC 1 cut(s) 2975
BstSCI CCNGG 1 cut(s) 2739
BstSFI CTRYAG 2 cut(s) 186, 2003
BstSLI GKGCMC 1 cut(s) 2707
BstUI CGCG 1 cut(s) 1488
BstV1I GCAGC 2 cut(s) 213, 1383
BstV2I GAAGAC 3 cut(s) 1612, 2517, 2841
BstX2I RGATCY 3 cut(s) 190, 297, 2746
BstXI CCANNNNNNTGG 1 cut(s) 2386
BstYI RGATCY 3 cut(s) 190, 297, 2746
BsuRI GGCC 8 cut(s) 17, 24, 775, 2106, 2316, 2347, 2498, 2839
BtgZI GCGATG 1 cut(s) 2948
BtsCI GGATG 7 cut(s) 420, 782, 841, 1063, 1399, 1672, 2243
BtsI GCAGTG 4 cut(s) 183, 537, 1064, 2121
BtsIMutI CAGTG 8 cut(s) 183, 537, 887, 1064, 1374, 1551, 2121, 2859
BveI ACCTGC 3 cut(s) 272, 1664, 1868
Cac8I GCNNGC 8 cut(s) 22, 94, 286, 1168, 1486, 2345, 2841, 2864
Cfr10I RCCGGY 1 cut(s) 20
CpoI CGGWCCG 1 cut(s) 3058
CsiI ACCWGGT 1 cut(s) 2739
Csp6I GTAC 5 cut(s) 134, 228, 1234, 1474, 2278
CspCI CAANNNNNGTGG 4 cut(s) 342, 377, 1306, 1341
CspI CGGWCCG 1 cut(s) 3058
CviQI GTAC 5 cut(s) 134, 228, 1234, 1474, 2278
DdeI CTNAG 8 cut(s) 330, 818, 927, 961, 968, 1467, 2761, 2982
DraI TTTAAA 1 cut(s) 144
EaeI YGGCCR 4 cut(s) 15, 22, 2345, 2496
Eam1104I CTCTTC 1 cut(s) 2772
EarI CTCTTC 1 cut(s) 2772
EciI GGCGGA 1 cut(s) 3050
Eco130I CCWWGG 2 cut(s) 1731, 2750
Eco24I GRGCYC 2 cut(s) 440, 2762
Eco31I GGTCTC 1 cut(s) 1121
Eco32I GATATC 1 cut(s) 2481
Eco47I GGWCC 8 cut(s) 172, 839, 1328, 1796, 1961, 2090, 2737, 3058
Eco57I CTGAAG 3 cut(s) 864, 2811, 2835
Eco72I CACGTG 1 cut(s) 2303
Eco91I GGTNACC 1 cut(s) 2975
EcoNI CCTNNNNNAGG 2 cut(s) 1782, 2399
EcoO109I RGGNCCY 1 cut(s) 2104
EcoO65I GGTNACC 1 cut(s) 2975
EcoRI GAATTC 1 cut(s) 2622
EcoRII CCWGG 1 cut(s) 2739
EcoRV GATATC 1 cut(s) 2481
EcoT14I CCWWGG 2 cut(s) 1731, 2750
EcoT38I GRGCYC 2 cut(s) 440, 2762
ErhI CCWWGG 2 cut(s) 1731, 2750
FauI CCCGC 2 cut(s) 2574, 2848
FauNDI CATATG 1 cut(s) 1303
FblI GTMKAC 2 cut(s) 1623, 1821
Fnu4HI GCNGC 5 cut(s) 18, 202, 268, 1150, 1372
FokI GGATG 7 cut(s) 407, 769, 848, 1070, 1386, 1679, 2250
FriOI GRGCYC 2 cut(s) 440, 2762
Fsp4HI GCNGC 5 cut(s) 18, 202, 268, 1150, 1372
FspBI CTAG 8 cut(s) 213, 449, 746, 759, 1122, 1782, 1859, 2696
GluI GCNGC 5 cut(s) 18, 202, 268, 1150, 1372
GsuI CTGGAG 3 cut(s) 590, 936, 1923
HaeIII GGCC 8 cut(s) 17, 24, 775, 2106, 2316, 2347, 2498, 2839
HapII CCGG 3 cut(s) 21, 175, 3056
HincII GTYRAC 1 cut(s) 1822
HindII GTYRAC 1 cut(s) 1822
HindIII AAGCTT 6 cut(s) 94, 138, 980, 2141, 2228, 2501
HinfI GANTC 9 cut(s) 1073, 1229, 1292, 1430, 1738, 1788, 2167, 2405, 2986
HpaII CCGG 3 cut(s) 21, 175, 3056
HphI GGTGA 9 cut(s) 253, 695, 1279, 1485, 1892, 2210, 2344, 2869, 2987
Hpy166II GTNNAC 5 cut(s) 1575, 1624, 1822, 2098, 3021
Hpy188III TCNNGA 9 cut(s) 213, 428, 555, 569, 1406, 2171, 2696, 2888, 3044
Hpy8I GTNNAC 5 cut(s) 1575, 1624, 1822, 2098, 3021
Hpy99I CGWCG 2 cut(s) 293, 1136
HpyCH4III ACNGT 5 cut(s) 476, 689, 1136, 1273, 1546
HpyCH4IV ACGT 4 cut(s) 9, 258, 1609, 2302
HpyF10VI GCNNNNNNNGC 7 cut(s) 98, 107, 1075, 1149, 1670, 2353, 2828
HpyF3I CTNAG 8 cut(s) 330, 818, 927, 961, 968, 1467, 2761, 2982
HpySE526I ACGT 4 cut(s) 9, 258, 1609, 2302
KroI GCCGGC 1 cut(s) 20
KroNI GCCGGC 1 cut(s) 22
LmnI GCTCC 5 cut(s) 107, 443, 571, 1007, 1557
Lsp1109I GCAGC 2 cut(s) 213, 1383
LweI GCATC 2 cut(s) 218, 2228
MabI ACCWGGT 1 cut(s) 2739
MaeI CTAG 8 cut(s) 213, 449, 746, 759, 1122, 1782, 1859, 2696
MaeII ACGT 4 cut(s) 9, 258, 1609, 2302
MbiI CCGCTC 1 cut(s) 2670
MfeI CAATTG 4 cut(s) 271, 1357, 2127, 3006
MflI RGATCY 3 cut(s) 190, 297, 2746
MhlI GDGCHC 4 cut(s) 440, 2308, 2707, 2762
MlsI TGGCCA 2 cut(s) 2347, 2498
MluI ACGCGT 1 cut(s) 1486
MluNI TGGCCA 2 cut(s) 2347, 2498
MlyI GAGTC 4 cut(s) 1238, 1301, 1797, 2995
MmeI TCCRAC 4 cut(s) 448, 810, 1870, 2715
Mox20I TGGCCA 2 cut(s) 2347, 2498
MroNI GCCGGC 1 cut(s) 20
MroXI GAANNNNTTC 2 cut(s) 1034, 1952
MscI TGGCCA 2 cut(s) 2347, 2498
MslI CAYNNNNRTG 1 cut(s) 214
Msp20I TGGCCA 2 cut(s) 2347, 2498
MspA1I CMGCKG 1 cut(s) 1471
MspI CCGG 3 cut(s) 21, 175, 3056
MspR9I CCNGG 1 cut(s) 2741
MunI CAATTG 4 cut(s) 271, 1357, 2127, 3006
Mva1269I GAATGC 1 cut(s) 606
MvaI CCWGG 1 cut(s) 2741
MvnI CGCG 1 cut(s) 1488
MwoI GCNNNNNNNGC 7 cut(s) 98, 107, 1075, 1149, 1670, 2353, 2828
NaeI GCCGGC 1 cut(s) 22
NdeI CATATG 1 cut(s) 1303
NgoMIV GCCGGC 1 cut(s) 20
NlaIV GGNNCC 5 cut(s) 418, 439, 2105, 2565, 2748
NmuCI GTSAC 3 cut(s) 259, 683, 2975
NspI RCATGY 3 cut(s) 1036, 1221, 2866
PaeI GCATGC 1 cut(s) 2866
PaqCI CACCTGC 3 cut(s) 272, 1664, 1868
PciI ACATGT 2 cut(s) 1032, 1217
PctI GAATGC 1 cut(s) 606
PdiI GCCGGC 1 cut(s) 22
PdmI GAANNNNTTC 2 cut(s) 1034, 1952
PfeI GAWTC 5 cut(s) 1073, 1430, 1738, 2167, 2405
PkrI GCNGC 5 cut(s) 19, 203, 269, 1151, 1373
PleI GAGTC 4 cut(s) 1237, 1300, 1796, 2994
PmaCI CACGTG 1 cut(s) 2303
PmlI CACGTG 1 cut(s) 2303
PpsI GAGTC 4 cut(s) 1237, 1300, 1796, 2994
Ppu21I YACGTR 1 cut(s) 2303
PscI ACATGT 2 cut(s) 1032, 1217
PshBI ATTAAT 1 cut(s) 2919
Psp1406I AACGTT 1 cut(s) 9
Psp6I CCWGG 1 cut(s) 2739
PspCI CACGTG 1 cut(s) 2303
PspEI GGTNACC 1 cut(s) 2975
PspGI CCWGG 1 cut(s) 2739
PspN4I GGNNCC 5 cut(s) 418, 439, 2105, 2565, 2748
PstI CTGCAG 2 cut(s) 190, 2007
PsuI RGATCY 3 cut(s) 190, 297, 2746
PvuII CAGCTG 1 cut(s) 1471
RsaI GTAC 5 cut(s) 135, 229, 1235, 1475, 2279
RsaNI GTAC 5 cut(s) 134, 228, 1234, 1474, 2278
RseI CAYNNNNRTG 1 cut(s) 214
Rsr2I CGGWCCG 1 cut(s) 3058
RsrII CGGWCCG 1 cut(s) 3058
SalI GTCGAC 1 cut(s) 1820
SatI GCNGC 5 cut(s) 18, 202, 268, 1150, 1372
SchI GAGTC 4 cut(s) 1238, 1301, 1797, 2995
ScrFI CCNGG 1 cut(s) 2741
SduI GDGCHC 4 cut(s) 440, 2308, 2707, 2762
SexAI ACCWGGT 1 cut(s) 2739
SfaNI GCATC 2 cut(s) 218, 2228
SfcI CTRYAG 2 cut(s) 186, 2003
SinI GGWCC 8 cut(s) 172, 839, 1328, 1796, 1961, 2090, 2737, 3058
SmiMI CAYNNNNRTG 1 cut(s) 214
SmlI CTYRAG 4 cut(s) 426, 1404, 2023, 3042
SmoI CTYRAG 4 cut(s) 426, 1404, 2023, 3042
SpeI ACTAGT 3 cut(s) 448, 745, 1121
SphI GCATGC 1 cut(s) 2866
SspI AATATT 3 cut(s) 1210, 1660, 1920
SspMI CTAG 8 cut(s) 213, 449, 746, 759, 1122, 1782, 1859, 2696
StyD4I CCNGG 1 cut(s) 2739
StyI CCWWGG 2 cut(s) 1731, 2750
TaaI ACNGT 5 cut(s) 476, 689, 1136, 1273, 1546
TaiI ACGT 4 cut(s) 12, 261, 1612, 2305
TaqI TCGA 4 cut(s) 115, 614, 1821, 2156
TaqII GACCGA 2 cut(s) 1145, 1475
TatI WGTACW 3 cut(s) 133, 1473, 2277
TauI GCSGC 3 cut(s) 20, 270, 1152
TfiI GAWTC 5 cut(s) 1073, 1430, 1738, 2167, 2405
TscAI CASTG 8 cut(s) 190, 544, 894, 1071, 1381, 1551, 2128, 2859
TseFI GTSAC 3 cut(s) 259, 683, 2975
TseI GCWGC 2 cut(s) 201, 1371
Tsp45I GTSAC 3 cut(s) 259, 683, 2975
TspGWI ACGGA 3 cut(s) 183, 683, 1232
TspRI CASTG 8 cut(s) 190, 544, 894, 1071, 1381, 1551, 2128, 2859
VpaK11BI GGWCC 8 cut(s) 172, 839, 1328, 1796, 1961, 2090, 2737, 3058
VspI ATTAAT 1 cut(s) 2919
XagI CCTNNNNNAGG 2 cut(s) 1782, 2399
XapI RAATTY 7 cut(s) 178, 334, 580, 1156, 2015, 2174, 2622
XbaI TCTAGA 2 cut(s) 212, 2695
XceI RCATGY 3 cut(s) 1036, 1221, 2866
XcmI CCANNNNNNNNNTGG 1 cut(s) 2851
XmiI GTMKAC 2 cut(s) 1623, 1821
XmnI GAANNNNTTC 2 cut(s) 1034, 1952
XspI CTAG 8 cut(s) 213, 449, 746, 759, 1122, 1782, 1859, 2696
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.