FvH4_3g17840

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000292
Physical Location & Seq
Reverse (-)
11335149 .. 11351526
16378 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g17840.t3

Sequence Viewer

Length: 3063 bp
ATGAATTACACATTCTTCTTCCCCAGGCTTCTTGTTCATTCTGTATTGCTAGTTATTATCTGTGCAAGCTTTGCTTTCGGAGCTACTACTCGACTATCAGAAGATGAAAAACAAGCTTTAAAGATCATAGGGAAGACGCTCAGGAAGAAAGACTGGGATTTCAATGTAGATCCTTGTAGTAGAGCATCTGGATGGATTACCCCAGCAGTCGACAAATATGAGAACAACGTCACCTGCGGCAATTGTACTACTACTGTTACGGGCGATGAGCAGATCTGCCATGTTATAAGCATATCACTGAAATCTCAAAGTTTGGCAGGAACACTCCCACCAGAGCTGGCGAGGCTCCCCTATCTAAAAGTAATTGACCTCAGTCGCAACTATCTGAGTGGTACCATCCCTCCAAAATGGGGCAGCCTGCCACTAACTAACATTTCCCTTGGTGGAAACCGTTTGACAGGTTCTATCCCTATTGAGCTCGGAAACATTAGCACCCTGCAATCCATCGACATCAATGCCAATAACTTTTCAGGATCTCTTCCTCAGGAGCTTGGGAATTTAACCAGCATAGAAAAACTCCTTCTTGACTCGAACAATTTTATTGGGAAGTTGCCCGAAACATTTGCCAGGCTTACCACATTGAAGGACTTTCGGGTTGGCGACAGTCACTTTTCTGGGAAGATACCGGATTTCATTCAAAACTGGAAACTTCTTGAAAGATTACAAATTCAGGCTAGTGGTTTGACTGGGCCAATTCCAGGCAACATCTCTCTTTTGAAGGGATTAATTGACCTGAGAATTACTAACTTGGATGGACCTGAAGCACCTATTCCTTCACTTAATAACTCGAAAAACCTGGACACACTGTGGTTGAGGAATTGCAATCTTATTGGACAACTCCCTACTTATCTTTCTGAGCTGACAGAGTTGGAGACATTAGACCTAAGCTTTAACAAACTTACTGGGGAAATTCCGAGCCCGTTTGTTAAAGATGATTTGGATTACATATTCTTAACTGGAAACTTGCTCAATGGATCAGTTCCTCAAAATCTGAAAGGAAGCCACATTGATCTTTCATACAACAATATCACCCCTGGGACGAATGACATTTGTGAGAATGGCGGCAAGAACTTATTTGCAAGCTCGTCAAAGGGAAATAATTCAATTGTTTCATGTCTAAATACATCATGTCCGGAAGAATTCTACTCATTCCATATAAACTGTGGTGGAAATGCAATAACAGTTACTGAAAGTACCACACACATACCATATGAATATGAAGCAGATCAAGATCCAGGTGGCCCTTCAAGATTTTATAACAGCAAAACCAATTGGGGTTTTAGCAGCACTGGTTACTTCCCTGATGATGGCATTCAAAATGACGCCTTTATTGTGGATAACGAAACTGCACTCTCTATGCCTGATCCTCAACTGTACATGACTGCACGTGTTTCACCCATCTCTCTTACTTATTTTGGGTTTTGCTTGATGAATGGAAACTACAGTGTGAAGCTCCATTTTGTAGAGATAATGTTTACAAATGACAGAACATATCATAGCTTGGGAAGGCGTATATTTGATATTTACATTCAGGGGATACGAGTGGAGAAGGATTTCAATATTGCGGATGTGGCAGGTGGGACTGGTAAATTAATCAACCAAAGCTATACTGCTTCTGTAACAAATCATACCTTGGAAATTCGTTTCTTCTGGAATGGGAAAGGAACACAATCTATCCCTGCTAGAGGAGTCTATGGTCCTCTTATATCCGCCATTTCTGTATACCCAGCTGATCCAAATTTTAAACCCCCGAAAAAAGACTCGCCAGGAGGGGGGATATCCGCAGGTGAAGTTGTTGGAATTGTGGCTGGAGGAGTCTTCATAATATTATTGATTTTAGGTATTCTGTGGTGGAAGGGCTTCATAGGACCAGCAAATACTTTGGAACAAGATTTGAAGGGTGTGGACTTGCAGACCGGCAAATTTACCTTGAGGCAAATCAAAACTGCCACCAACAACTTTGACAAAGCGAACCAGATTGGAGAAGGTGGTTTTGGTCCTGTTTACAAGGGCGTTCTATCAGACAACACTGAAATTGCTGTTAAGAAGCTTTCAGCCAAATCGAAGCAAGGGAACCGTGAATTTGTGAATGAGATAGGCATGATTTCTGCTCTGCAACACCCTCACCTTGTCAAGCTTTATGGATGCTGCATTGAAGGAAATAACTTGTTGCTTGTCTACGAGTACATGGAAAACAATAGTGTCGCTCGTGCTCTGTTTGGCCCCAGAGAAAGTCAGTTGAATTTGGACTGGCCAACAAGGCATAGGATTTGTGTTGGTATAGCCAGAGGTTTGGCTTACCTCCATGAGGAATCAAGGTTGAAGATCGTTCATAGAGACATCAAAGCTACTAATGTGCTACTTGATAAAAATCTTTTCCCAAAGATATCTGACTTTGGATTGGCCAAGCTTGATGAAGAGGATAATACCCACATAAGCACTCGGATTGCTGGAACTTTTGGTTATATGGCACCTGAATATGCGATGCGAGGTTATCTAACTGATAAAGCAGATGTCTATAGTTTCGGAATTGTTGTATTGGAAATGGTCAGTGGAAGGTGCAATACAACTTATCGCTCAAAGGAAGAATGCTTTTATCTTCTTGATTGGGCACTTCTTCTAAAAGAGAGAGCAAGTTTGTTGGACCTAGTGGATCCAAGGTTGGGCTCGTTTAACAAAGACCAGATGATTACTACAATCAATGTTGCTCTCCTTTGTGCTAATGTTTCTTCAGCCGTTAGGCCCTCCATGTCTTCAGTGGTGAGCATGCTTGAAGGTAGAGCTTCTGTTCAGGAGGTGGTCTTTGATCCAAATGCCTCAATTAAGGAAATCAATGCGATGAGGAAACATTTTCAGTCAAACATATTTGAAGAAAACAATGGTGACTCTGAGAGTCAGAGAGAAACTATGTCAATTGAAAAATCATGGACTGCTTCATCTACATCTGCTCAAGACCTCTATCCGGTCCTCCCTGATTCATATTATTGGGAGAATAGAAATTAG

Protein Analysis

1021

Amino Acids

112.74

Weight (kDa)

5.67

Isoelectric Point (pI)

33.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 65 - 152 1e-06 Leucine-rich repeat region
Malectin PF11721 309 - 498 6.4e-40 Malectin domain
Pkinase PF00069 581 - 781 9.9e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 583 - 784 3e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000292)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53420 AT3G14840
fragaria_vesca FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17850 FvH4_3g17850 FvH4_3g17850 FvH4_3g17850 FvH4_3g17851
malus_domestica MD03G1246600.v1.1 MD06G1045200.v1.1 MD06G1045400.v1.1 MD11G1267800.v1.1 MD11G1267900.v1.1 MD11G1268100.v1.1 MD11G1268300.v1.1 MD11G1268500.v1.1 MD11G1268600.v1.1
prunus_persica Prupe.4G157700_v2.0.a1 Prupe.4G157700_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157900_v2.0.a1 Prupe.4G157900_v2.0.a1 Prupe.4G157900_v2.0.a1
pyrus_communis pycom03g19540 pycom11g23600 pycom11g23630 pycom11g23690 pycom11g23720 pycom11g23730 pycom11g23740 pycom11g23750
rosa_chinensis RchiOBHm_Chr0c40g0503411 RchiOBHm_Chr0c40g0503421 RchiOBHm_Chr5g0029631 RchiOBHm_Chr5g0029661 RchiOBHm_Chr5g0029701 RchiOBHm_Chr5g0029741 RchiOBHm_Chr5g0029771 RchiOBHm_Chr5g0029781 RchiOBHm_Chr5g0029811 RchiOBHm_Chr5g0029851 RchiOBHm_Chr5g0029871 RchiOBHm_Chr5g0029891 RchiOBHm_Chr7g0222221
rosa_laevigata RLG00000017380 RLG00000032873 RLG00000033188 RLG00000033190 RLG00000033192 RLG00000033193 RLG00000033194 RLG00000033196 RLG00000033199 RLG00000033238
rosa_multiflora Rmu_co8359987.1_g000001 Rmu_co8444909.1_g000001 Rmu_sc0001608.1_g000007 Rmu_sc0001608.1_g000009 Rmu_sc0001608.1_g000013 Rmu_sc0001608.1_g000018 Rmu_sc0001608.1_g000023 Rmu_sc0001608.1_g000040 Rmu_sc0003238.1_g000016 Rmu_sc0003368.1_g000026 Rmu_sc0003368.1_g000034 Rmu_sc0003368.1_g000043 Rmu_sc0003368.1_g000047 Rmu_sc0003368.1_g000052 Rmu_sc0003368.1_g000054 Rmu_sc0004963.1_g000001
rosa_roxburghii Rroxscaffold_1G00050080 Rroxscaffold_1G00050090 Rroxscaffold_1G00050110 Rroxscaffold_1G00050120 Rroxscaffold_1G00050180 Rroxscaffold_1G00050190 Rroxscaffold_1G00050220 Rroxscaffold_1G00050270 Rroxscaffold_1G00050300
rosa_rugosa Rorug04G0065200 Rorug05G0114900 Rorug05G0115000 Rorug05G0115100 Rorug05G0120100 Rorug05G0238900
rosa_samantha Rh5AG207800 Rh5AG208000 Rh5AG208300 Rh5AG208400 Rh5AG208800 Rh5AG294900 Rh5AG295000 Rh5AG295400 Rh5CG230400 Rh7AG347800
rosa_wichuraiana Rw0G005370 Rw0G012460 Rw0G019060 Rw5G018910 Rw5G018920 Rw5G018930 Rw5G018940 Rw5G018960 Rw5G018970 Rw5G018980 Rw5G018990 Rw5G019000 Rw7G029840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 287, 1317
AarI CACCTGC 3 cut(s) 242, 1625, 1835
Acc36I ACCTGC 3 cut(s) 242, 1625, 1835
Acc65I GGTACC 1 cut(s) 392
AccB1I GGYRCC 2 cut(s) 392, 2530
AccI GTMKAC 3 cut(s) 210, 1782, 2238
AccIII TCCGGA 1 cut(s) 1192
AciI CCGC 5 cut(s) 237, 1122, 1625, 1770, 1842
AclWI GGATC 9 cut(s) 164, 541, 1042, 1286, 1418, 1787, 2708, 2721, 2861
AcoI YGGCCR 2 cut(s) 2312, 2463
AcsI RAATTY 9 cut(s) 556, 726, 969, 1199, 1698, 1798, 1982, 2141, 2302
AcuI CTGAAG 3 cut(s) 840, 2775, 2799
AcvI CACGTG 1 cut(s) 1448
AcyI GRCGYC 1 cut(s) 1383
AdeI CACNNNGTG 1 cut(s) 867
AfaI GTAC 5 cut(s) 247, 394, 1255, 1436, 2246
AfiI CCNNNNNNNGG 8 cut(s) 410, 758, 1367, 1745, 1832, 2368, 2723, 3022
AflIII ACRYGT 1 cut(s) 1447
AjnI CCWGG 7 cut(s) 23, 626, 757, 855, 1093, 1294, 1825
AjuI GAANNNNNNNTTGG 2 cut(s) 2037, 2069
Alw21I GWGCWC 2 cut(s) 480, 2275
Alw26I GTCTC 2 cut(s) 926, 2391
AlwI GGATC 9 cut(s) 164, 541, 1042, 1286, 1418, 1787, 2708, 2721, 2861
AlwNI CAGNNNCTG 1 cut(s) 1247
Aor13HI TCCGGA 1 cut(s) 1192
AoxI GGCC 6 cut(s) 749, 1300, 2281, 2312, 2463, 2801
ApeKI GCWGC 3 cut(s) 414, 1344, 2208
ApoI RAATTY 9 cut(s) 556, 726, 969, 1199, 1698, 1798, 1982, 2141, 2302
AseI ATTAAT 2 cut(s) 785, 1652
Asp700I GAANNNNTTC 3 cut(s) 1159, 1613, 1919
Asp718I GGTACC 1 cut(s) 392
AsuHPI GGTGA 7 cut(s) 223, 1081, 1446, 1859, 2177, 2833, 2954
AvaII GGWCC 6 cut(s) 815, 1757, 1928, 2057, 2704, 3025
AxyI CCTNAGG 1 cut(s) 543
BaeGI GKGCMC 1 cut(s) 2674
BalI TGGCCA 2 cut(s) 2314, 2465
BamHI GGATCC 1 cut(s) 2713
BanI GGYRCC 2 cut(s) 392, 2530
BanII GRGCYC 3 cut(s) 480, 980, 2729
BarI GAAGNNNNNNTAC 2 cut(s) 2608, 2640
BauI CACGAG 1 cut(s) 2268
BbrPI CACGTG 1 cut(s) 1448
BbsI GAAGAC 3 cut(s) 140, 1870, 2805
Bbv12I GWGCWC 2 cut(s) 480, 2275
BbvI GCAGC 3 cut(s) 426, 1356, 2195
BccI CCATC 6 cut(s) 186, 404, 512, 806, 1361, 1466
BceAI ACGGC 1 cut(s) 2780
BcgI CGANNNNNNTGC 4 cut(s) 497, 531, 605, 639
BciT130I CCWGG 7 cut(s) 25, 628, 759, 857, 1095, 1296, 1827
BciVI GTATCC 1 cut(s) 1590
BcoDI GTCTC 2 cut(s) 926, 2391
BfaI CTAG 4 cut(s) 50, 735, 1743, 2708
BfmI CTRYAG 2 cut(s) 1501, 2578
BfuAI ACCTGC 3 cut(s) 242, 1625, 1835
BfuI GTATCC 1 cut(s) 1590
BglI GCCNNNNNGGC 1 cut(s) 2320
BglII AGATCT 1 cut(s) 273
BisI GCNGC 5 cut(s) 238, 415, 1123, 1345, 2209
BlsI GCNGC 5 cut(s) 239, 416, 1124, 1346, 2210
Bme1390I CCNGG 7 cut(s) 25, 628, 759, 857, 1095, 1296, 1827
Bme18I GGWCC 6 cut(s) 815, 1757, 1928, 2057, 2704, 3025
BmiI GGNNCC 6 cut(s) 347, 394, 2135, 2284, 2532, 2715
BmrFI CCNGG 7 cut(s) 25, 628, 759, 857, 1095, 1296, 1827
BmrI ACTGGG 3 cut(s) 163, 756, 972
BmsI GCATC 3 cut(s) 194, 2195, 2535
BmuI ACTGGG 3 cut(s) 163, 756, 972
BoxI GACNNNNGTC 1 cut(s) 372
BpiI GAAGAC 3 cut(s) 140, 1870, 2805
BpmI CTGGAG 1 cut(s) 1890
Bpu10I CCTNAGC 2 cut(s) 140, 944
BpuEI CTTGAG 2 cut(s) 2011, 2994
BsaAI YACGTR 1 cut(s) 1448
BsaBI GATNNNNATC 2 cut(s) 1290, 2430
BsaHI GRCGYC 1 cut(s) 1383
BsaJI CCNNGG 6 cut(s) 23, 439, 1093, 1094, 1692, 2717
BsaWI WCCGGW 3 cut(s) 685, 1192, 3022
BsaXI ACNNNNNCTCC 2 cut(s) 385, 415
Bsc4I CCNNNNNNNGG 8 cut(s) 410, 758, 1367, 1745, 1832, 2368, 2723, 3022
Bse118I RCCGGY 1 cut(s) 1976
Bse1I ACTGG 8 cut(s) 158, 707, 751, 967, 1021, 1354, 1648, 2315
Bse21I CCTNAGG 1 cut(s) 543
Bse8I GATNNNNATC 2 cut(s) 1290, 2430
BseAI TCCGGA 1 cut(s) 1192
BseBI CCWGG 7 cut(s) 25, 628, 759, 857, 1095, 1296, 1827
BseDI CCNNGG 6 cut(s) 23, 439, 1093, 1094, 1692, 2717
BseGI GGATG 5 cut(s) 197, 396, 817, 1633, 2210
BseJI GATNNNNATC 2 cut(s) 1290, 2430
BseLI CCNNNNNNNGG 8 cut(s) 410, 758, 1367, 1745, 1832, 2368, 2723, 3022
BseMII CTCAG 7 cut(s) 154, 377, 385, 557, 785, 906, 2940
BseNI ACTGG 8 cut(s) 158, 707, 751, 967, 1021, 1354, 1648, 2315
BseRI GAGGAG 2 cut(s) 1761, 1887
BseSI GKGCMC 1 cut(s) 2674
BseXI GCAGC 3 cut(s) 426, 1356, 2195
BseYI CCCAGC 2 cut(s) 202, 1786
BsgI GTGCAG 2 cut(s) 1392, 1428
BshFI GGCC 6 cut(s) 751, 1302, 2283, 2314, 2465, 2803
BshNI GGYRCC 2 cut(s) 392, 2530
BsiHKAI GWGCWC 2 cut(s) 480, 2275
BsiSI CCGG 4 cut(s) 686, 1193, 1977, 3023
BslFI GGGAC 2 cut(s) 1111, 1654
BslI CCNNNNNNNGG 8 cut(s) 410, 758, 1367, 1745, 1832, 2368, 2723, 3022
BsmAI GTCTC 2 cut(s) 926, 2391
BsmFI GGGAC 2 cut(s) 1111, 1654
BsmI GAATGC 2 cut(s) 1371, 2654
BsnI GGCC 6 cut(s) 751, 1302, 2283, 2314, 2465, 2803
Bsp1286I GDGCHC 5 cut(s) 480, 980, 2275, 2674, 2729
Bsp13I TCCGGA 1 cut(s) 1192
Bsp1407I TGTACA 1 cut(s) 1434
BspACI CCGC 5 cut(s) 237, 1122, 1625, 1770, 1842
BspANI GGCC 6 cut(s) 751, 1302, 2283, 2314, 2465, 2803
BspCNI CTCAG 7 cut(s) 153, 378, 384, 556, 786, 907, 2941
BspEI TCCGGA 1 cut(s) 1192
BspLI GGNNCC 6 cut(s) 347, 394, 2135, 2284, 2532, 2715
BspMI ACCTGC 3 cut(s) 242, 1625, 1835
BspPI GGATC 9 cut(s) 164, 541, 1042, 1286, 1418, 1787, 2708, 2721, 2861
BspT107I GGYRCC 2 cut(s) 392, 2530
BsrFI RCCGGY 1 cut(s) 1976
BsrGI TGTACA 1 cut(s) 1434
BsrI ACTGG 8 cut(s) 158, 707, 751, 967, 1021, 1354, 1648, 2315
BssAI RCCGGY 1 cut(s) 1976
BssECI CCNNGG 6 cut(s) 23, 439, 1093, 1094, 1692, 2717
BssNAI GTATAC 1 cut(s) 1783
BssNI GRCGYC 1 cut(s) 1383
BssSI CACGAG 1 cut(s) 2268
BssT1I CCWWGG 3 cut(s) 439, 1692, 2717
Bst1107I GTATAC 1 cut(s) 1783
Bst2BI CACGAG 1 cut(s) 2268
Bst2UI CCWGG 7 cut(s) 25, 628, 759, 857, 1095, 1296, 1827
Bst4CI ACNGT 9 cut(s) 256, 452, 665, 867, 1223, 1243, 1434, 1505, 2138
Bst6I CTCTTC 2 cut(s) 543, 2472
BstACI GRCGYC 1 cut(s) 1383
BstAPI GCANNNNNTGC 1 cut(s) 71
BstAUI TGTACA 1 cut(s) 1434
BstBAI YACGTR 1 cut(s) 1448
BstC8I GCNNGC 5 cut(s) 67, 339, 419, 1141, 2828
BstDEI CTNAG 8 cut(s) 140, 371, 386, 543, 794, 915, 944, 2949
BstENI CCTNNNNNAGG 2 cut(s) 1743, 2366
BstF5I GGATG 5 cut(s) 197, 396, 817, 1633, 2210
BstMAI GTCTC 2 cut(s) 926, 2391
BstMWI GCNNNNNNNGC 5 cut(s) 71, 80, 343, 1631, 2320
BstNI CCWGG 7 cut(s) 25, 628, 759, 857, 1095, 1296, 1827
BstNSI RCATGY 1 cut(s) 2830
BstPAI GACNNNNGTC 1 cut(s) 372
BstSCI CCNGG 7 cut(s) 23, 626, 757, 855, 1093, 1294, 1825
BstSFI CTRYAG 2 cut(s) 1501, 2578
BstSLI GKGCMC 1 cut(s) 2674
BstV1I GCAGC 3 cut(s) 426, 1356, 2195
BstV2I GAAGAC 3 cut(s) 140, 1870, 2805
BstX2I RGATCY 5 cut(s) 169, 273, 533, 1291, 2713
BstXI CCANNNNNNTGG 1 cut(s) 2353
BstYI RGATCY 5 cut(s) 169, 273, 533, 1291, 2713
BstZ17I GTATAC 1 cut(s) 1783
Bsu36I CCTNAGG 1 cut(s) 543
BsuI GTATCC 1 cut(s) 1590
BsuRI GGCC 6 cut(s) 751, 1302, 2283, 2314, 2465, 2803
BtgZI GCGATG 3 cut(s) 279, 2558, 2912
BtsCI GGATG 5 cut(s) 197, 396, 817, 1633, 2210
BtsIMutI CAGTG 7 cut(s) 296, 863, 1347, 1510, 2088, 2617, 2823
BveI ACCTGC 3 cut(s) 242, 1625, 1835
Cac8I GCNNGC 5 cut(s) 67, 339, 419, 1141, 2828
CaiI CAGNNNCTG 1 cut(s) 1247
Cfr10I RCCGGY 1 cut(s) 1976
CseI GACGC 2 cut(s) 145, 1391
Csp6I GTAC 5 cut(s) 246, 393, 1254, 1435, 2245
CviQI GTAC 5 cut(s) 246, 393, 1254, 1435, 2245
DdeI CTNAG 8 cut(s) 140, 371, 386, 543, 794, 915, 944, 2949
DraI TTTAAA 2 cut(s) 120, 1804
DraIII CACNNNGTG 1 cut(s) 867
EaeI YGGCCR 2 cut(s) 2312, 2463
Eam1104I CTCTTC 2 cut(s) 543, 2472
EarI CTCTTC 2 cut(s) 543, 2472
EciI GGCGGA 1 cut(s) 1759
Ecl136II GAGCTC 1 cut(s) 478
Eco130I CCWWGG 3 cut(s) 439, 1692, 2717
Eco24I GRGCYC 3 cut(s) 480, 980, 2729
Eco32I GATATC 2 cut(s) 1839, 2448
Eco47I GGWCC 6 cut(s) 815, 1757, 1928, 2057, 2704, 3025
Eco53kI GAGCTC 1 cut(s) 478
Eco57I CTGAAG 3 cut(s) 840, 2775, 2799
Eco72I CACGTG 1 cut(s) 1448
Eco81I CCTNAGG 1 cut(s) 543
EcoICRI GAGCTC 1 cut(s) 478
EcoNI CCTNNNNNAGG 2 cut(s) 1743, 2366
EcoO109I RGGNCCY 1 cut(s) 2802
EcoRI GAATTC 1 cut(s) 1199
EcoRII CCWGG 7 cut(s) 23, 626, 757, 855, 1093, 1294, 1825
EcoRV GATATC 2 cut(s) 1839, 2448
EcoT14I CCWWGG 3 cut(s) 439, 1692, 2717
EcoT38I GRGCYC 3 cut(s) 480, 980, 2729
ErhI CCWWGG 3 cut(s) 439, 1692, 2717
FalI AAGNNNNNCTT 2 cut(s) 58, 90
FaqI GGGAC 2 cut(s) 1111, 1654
FauNDI CATATG 1 cut(s) 1270
FblI GTMKAC 3 cut(s) 210, 1782, 2238
Fnu4HI GCNGC 5 cut(s) 238, 415, 1123, 1345, 2209
FokI GGATG 5 cut(s) 204, 383, 824, 1640, 2217
FriOI GRGCYC 3 cut(s) 480, 980, 2729
Fsp4HI GCNGC 5 cut(s) 238, 415, 1123, 1345, 2209
FspBI CTAG 4 cut(s) 50, 735, 1743, 2708
GluI GCNGC 5 cut(s) 238, 415, 1123, 1345, 2209
GsaI CCCAGC 2 cut(s) 206, 1790
GsuI CTGGAG 1 cut(s) 1890
HaeIII GGCC 6 cut(s) 751, 1302, 2283, 2314, 2465, 2803
HapII CCGG 4 cut(s) 686, 1193, 1977, 3023
HgaI GACGC 2 cut(s) 145, 1391
Hin1I GRCGYC 1 cut(s) 1383
HincII GTYRAC 1 cut(s) 211
HindII GTYRAC 1 cut(s) 211
HindIII AAGCTT 6 cut(s) 67, 114, 946, 2108, 2195, 2468
HinfI GANTC 8 cut(s) 587, 1749, 1820, 1875, 2372, 2945, 2953, 3035
HpaII CCGG 4 cut(s) 686, 1193, 1977, 3023
HphI GGTGA 7 cut(s) 223, 1081, 1446, 1859, 2177, 2833, 2954
Hpy166II GTNNAC 6 cut(s) 211, 1536, 1783, 1966, 2065, 2239
Hpy8I GTNNAC 6 cut(s) 211, 1536, 1783, 1966, 2065, 2239
HpyCH4III ACNGT 9 cut(s) 256, 452, 665, 867, 1223, 1243, 1434, 1505, 2138
HpyCH4IV ACGT 2 cut(s) 228, 1447
HpyF10VI GCNNNNNNNGC 5 cut(s) 71, 80, 343, 1631, 2320
HpyF3I CTNAG 8 cut(s) 140, 371, 386, 543, 794, 915, 944, 2949
HpySE526I ACGT 2 cut(s) 228, 1447
Hsp92I GRCGYC 1 cut(s) 1383
Kpn2I TCCGGA 1 cut(s) 1192
KpnI GGTACC 1 cut(s) 396
LmnI GCTCC 4 cut(s) 80, 351, 547, 1518
Lsp1109I GCAGC 3 cut(s) 426, 1356, 2195
LweI GCATC 3 cut(s) 194, 2195, 2535
MaeI CTAG 4 cut(s) 50, 735, 1743, 2708
MaeII ACGT 2 cut(s) 228, 1447
MaeIII GTNAC 7 cut(s) 229, 256, 665, 1243, 1352, 1678, 2942
MfeI CAATTG 4 cut(s) 241, 1164, 1330, 2973
MflI RGATCY 5 cut(s) 169, 273, 533, 1291, 2713
MhlI GDGCHC 5 cut(s) 480, 980, 2275, 2674, 2729
MlsI TGGCCA 2 cut(s) 2314, 2465
MluNI TGGCCA 2 cut(s) 2314, 2465
MlyI GAGTC 6 cut(s) 581, 1758, 1814, 1884, 2939, 2962
MmeI TCCRAC 3 cut(s) 909, 1837, 2682
Mox20I TGGCCA 2 cut(s) 2314, 2465
MroI TCCGGA 1 cut(s) 1192
MroXI GAANNNNTTC 3 cut(s) 1159, 1613, 1919
MscI TGGCCA 2 cut(s) 2314, 2465
MslI CAYNNNNRTG 1 cut(s) 190
Msp20I TGGCCA 2 cut(s) 2314, 2465
MspA1I CMGCKG 1 cut(s) 1790
MspI CCGG 4 cut(s) 686, 1193, 1977, 3023
MspR9I CCNGG 7 cut(s) 25, 628, 759, 857, 1095, 1296, 1827
MunI CAATTG 4 cut(s) 241, 1164, 1330, 2973
Mva1269I GAATGC 2 cut(s) 1371, 2654
MvaI CCWGG 7 cut(s) 25, 628, 759, 857, 1095, 1296, 1827
MwoI GCNNNNNNNGC 5 cut(s) 71, 80, 343, 1631, 2320
NdeI CATATG 1 cut(s) 1270
NlaIV GGNNCC 6 cut(s) 347, 394, 2135, 2284, 2532, 2715
NmuCI GTSAC 3 cut(s) 229, 665, 2942
NspI RCATGY 1 cut(s) 2830
PaeI GCATGC 1 cut(s) 2830
PaqCI CACCTGC 3 cut(s) 242, 1625, 1835
PasI CCCWGGG 1 cut(s) 1094
PctI GAATGC 2 cut(s) 1371, 2654
PdmI GAANNNNTTC 3 cut(s) 1159, 1613, 1919
PfeI GAWTC 2 cut(s) 2372, 3035
PkrI GCNGC 5 cut(s) 239, 416, 1124, 1346, 2210
PleI GAGTC 6 cut(s) 581, 1757, 1814, 1883, 2939, 2961
PmaCI CACGTG 1 cut(s) 1448
PmlI CACGTG 1 cut(s) 1448
PpsI GAGTC 6 cut(s) 581, 1757, 1814, 1883, 2939, 2961
Ppu21I YACGTR 1 cut(s) 1448
PshAI GACNNNNGTC 1 cut(s) 372
PshBI ATTAAT 2 cut(s) 785, 1652
PsiI TTATAA 2 cut(s) 287, 1317
Psp124BI GAGCTC 1 cut(s) 480
Psp6I CCWGG 7 cut(s) 23, 626, 757, 855, 1093, 1294, 1825
PspCI CACGTG 1 cut(s) 1448
PspFI CCCAGC 2 cut(s) 202, 1786
PspGI CCWGG 7 cut(s) 23, 626, 757, 855, 1093, 1294, 1825
PspN4I GGNNCC 6 cut(s) 347, 394, 2135, 2284, 2532, 2715
PstNI CAGNNNCTG 1 cut(s) 1247
PsuI RGATCY 5 cut(s) 169, 273, 533, 1291, 2713
PvuII CAGCTG 1 cut(s) 1790
RsaI GTAC 5 cut(s) 247, 394, 1255, 1436, 2246
RsaNI GTAC 5 cut(s) 246, 393, 1254, 1435, 2245
RseI CAYNNNNRTG 1 cut(s) 190
SacI GAGCTC 1 cut(s) 480
SalI GTCGAC 1 cut(s) 209
SatI GCNGC 5 cut(s) 238, 415, 1123, 1345, 2209
SchI GAGTC 6 cut(s) 581, 1758, 1814, 1884, 2939, 2962
ScrFI CCNGG 7 cut(s) 25, 628, 759, 857, 1095, 1296, 1827
SduI GDGCHC 5 cut(s) 480, 980, 2275, 2674, 2729
SfaNI GCATC 3 cut(s) 194, 2195, 2535
SfcI CTRYAG 2 cut(s) 1501, 2578
SinI GGWCC 6 cut(s) 815, 1757, 1928, 2057, 2704, 3025
SmiMI CAYNNNNRTG 1 cut(s) 190
SmlI CTYRAG 2 cut(s) 1990, 3009
SmoI CTYRAG 2 cut(s) 1990, 3009
SphI GCATGC 1 cut(s) 2830
SsiI CCGC 5 cut(s) 237, 1122, 1625, 1770, 1842
SspI AATATT 2 cut(s) 1621, 1887
SspMI CTAG 4 cut(s) 50, 735, 1743, 2708
SstI GAGCTC 1 cut(s) 480
StyD4I CCNGG 7 cut(s) 23, 626, 757, 855, 1093, 1294, 1825
StyI CCWWGG 3 cut(s) 439, 1692, 2717
TaaI ACNGT 9 cut(s) 256, 452, 665, 867, 1223, 1243, 1434, 1505, 2138
TaiI ACGT 2 cut(s) 231, 1450
TaqI TCGA 6 cut(s) 91, 210, 507, 590, 848, 2123
TatI WGTACW 3 cut(s) 245, 1434, 2244
TauI GCSGC 2 cut(s) 240, 1125
TfiI GAWTC 2 cut(s) 2372, 3035
TscAI CASTG 7 cut(s) 303, 870, 1354, 1510, 2095, 2617, 2823
TseFI GTSAC 3 cut(s) 229, 665, 2942
TseI GCWGC 3 cut(s) 414, 1344, 2208
Tsp45I GTSAC 3 cut(s) 229, 665, 2942
TspRI CASTG 7 cut(s) 303, 870, 1354, 1510, 2095, 2617, 2823
VpaK11BI GGWCC 6 cut(s) 815, 1757, 1928, 2057, 2704, 3025
VspI ATTAAT 2 cut(s) 785, 1652
XagI CCTNNNNNAGG 2 cut(s) 1743, 2366
XapI RAATTY 9 cut(s) 556, 726, 969, 1199, 1698, 1798, 1982, 2141, 2302
XceI RCATGY 1 cut(s) 2830
XcmI CCANNNNNNNNNTGG 2 cut(s) 1220, 2815
XmiI GTMKAC 3 cut(s) 210, 1782, 2238
XmnI GAANNNNTTC 3 cut(s) 1159, 1613, 1919
XspI CTAG 4 cut(s) 50, 735, 1743, 2708
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.