Rw7G029840

leucine-rich repeat receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
Physical Location & Seq
Reverse (-)
41692980 .. 41768253
75274 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G029840.1

Sequence Viewer

Length: 3015 bp
ATGAACAACTACATGCTGTTCATCAATCGGCTTCTGGTTCATTCTCTGCTGCTACTTTGCTTTGCAACCTTAGCTTTTGGAGCAAATCGACTATTAGCCGATGAAGTGCAAGCTTTGAAGGACATAGCAAAGACACTGGGCAAGACAGATTGGAATTTCAGTGCTGATCCATGCAGCGGACAATATGGCTGGATTACTCATAAACCGGACAAATATTTTGCGAATAACGTCACTTGCGGCAATTGTACGACTTCCGATGCGGCTAATGCCACCAGTACTGATCAGATCTGCCATGTTGTTAGCATACTTCTGAAATCTCAAGATTTGCAAGGAACACTTCCGTTAGAGTTGGTGAGGCTCCACTATCTCCAAACAATTGATCTTACCCGTAACTTTCTGAACGGAACCATCCCTCCACAATGGGGCACCCTGCCACTAGTTCACATTTCCCTTGGTGGAAACCGATTGACAGGTTCCATCCCCGTTGAGCTTGCAAATGTTACCACCATGAAAATTTTGACGATCGATGTCAATTATTTTTCTGGAGGTCTTCCTTGGGAACTTGGAAATTTGCCTCACATAGAATTACTGGGTCTTACCTCGAACAATTTTACTGGAGAGTTGCCGAGTACTTTTGCAAGGCTTGCCACATTAAAGGAGTTTAGGATTACGGACAATTCCTTTTCTGGGGAGATACCTAATTTTATTCAAAACTGGACAACTATTGAGAAACTATGGATTCAGGCTAGCGGTTTGACTGGGCCAATTCCTTCTGGCATTTCTCTTTTGACAAATTTAATCGACCTGAGAATTGCTGACTTGAATGGACCTGAATCATCCTTTCCTCTACTTGAGAATATGAAATATCTGAGGACACTGATATTGAGAACTTGCAATATTAATGGACAGCTACCAGTATATTTTTCGGACATGACAGAGTTGGCAACTTTAGACCTCAGCTTCAACAAGCTAACTGGAAGAGTCCCAAGCAACTTTGTTGCTCCAAATAAGTTGGATTACATTGATCTTTCATATAACAATTTAACCGAAGGGATTGAGAATTGTCAGCCACAAGCCGGCCGGAACTTCTTTGCAAGCGCTTCAAAGGGAAACGATTCGGAGGTGGAATTAAAGTTCTCTTGTTTGGCTCTAATTGCTTGTTGTACAGGTTGGCACTCTCTCAATATAAATTGCGGCGGTAGTGGAGTGACAATTAATGGAACAACATATGATGAGGATACAGTTGCAAATGGACCTTCATCATATTACCTCAGCAGCACAAATTGGGCGTTAAGCAGCACTGGCTACTTCCTTGATGATGATAGTTCTACAGACCACTTTACTTGGTCTGCTGATTCATCTACACTCTCTATGGCCAATCGTCAACTATACACGACTGCGCGCCTTTCTCCCATCTCTCTAACTTATTATGGGTTTTGCCTGCTAAATGGAAACTACACAGTAAACCTCCATTTTGCAGAGATAATGTTTACAAATGGTCCAACATATAAAAGCTTGGGAAGGCGTATATTTGATGTTTATATTCAGGGGATTCGAGTGCTGCAGGATTTCAATATTGCCAAGGAAGCAGGTGGGGCTGGTAAGGCAGTCATAAAAAACTTTACTGCTGCTGTAACTACTAATACTTTGGAAATCCGTTTCTTTTGGGCTGGGAAAGGAACCACAGGTATCCCAGTAAGAGCAATCTATGGTCCTCTTGTCTCCGCTATTAGTGTAGATCCAGACTTTGAACCCCCGGCAGAAACCTCGTCAGAACCCATGTCAAGGAGTTTATCTATAGGCGAAGTAGTTGGAATTATGGCTGGGGGAATATTCCTTGTATTACTGATTTTCGGTATTCTTTGGTTGAGAGGCTATCTAAGACGAGAAAGGACTTTGGAGCAAGATTTAAAAGGTCTTGACCTGCAAACGGGTAAATTTAGCTTGAGGCAAATCAAAGATGCCACAAACAACTTTGATAGAGCCAACAAGATTGGAGAAGGTGGTTTTGGTCCTGTTTTCAAGGGGCAACTATCAGATGGCACCGCAATTGCTGTTAAGCAGCTTTCTGCCAAATCAAAGCAAGGAAATCGTGAATTTCTGAATGAGATTGGCATGATTTCTGCTCTGCAACACCCTCATCTTGTCAAGCTCTATGGATGCTGCATTGAAGGAAATCAGTTGTTGCTTGTCTACGAGTACATGGAGAATAACAATGTTGGACGCGCTTTGTTTGGTGCAAAAGAAAGTCAGTTGAAGTTAGATTGGCCAACAAGGCACAGGATTTGTGTTGGTATTGCAAAAGGTTTGGCTTACCTCCATGAAGAATCACGGTTGAAGATCGTTCATAGAGACATCAAAGCTGCTAATGTGCTGCTTGATAAAAATCTTTACCCGAAGATATCTGACTTTGGCCTAGCCAAGCTTAATGAAGATGATAGTACCCATATAAGCACTAGGATTGCTGGAACTTATGGATATATGGCACCTGAATATGCAATGCGAGGTCATCTAACTAATAAAGCAGATGTGTATAGTTTCGGAATTCTTGTATTGGAAATGGTCAGTGGAAGATGCAACACAACTTACTGTTCCAAGGGAGAGTGCTTTTACATTCTTGATTGGGCACTTCTTCTGAAAGAGAAAGGAAGTTTGCTAGACCTAGTCGATCCAAGGTTGGGATCAGATTTTAACAAGGAAGGCGTGATGATTACCATCAATGTGGCTCTCCTTTGCTGTAATGTCTCTGCAGCACTTAGGCCTGCCATGTCTTCAGTGGTGAGCATGCTTGAAGGCAGGGCTCCTGTTGAGGTGTTAGTCTTAGATTCATGTGACTCATCTGATGAGATCAGTGAAATGAGGAAACATTTTGAATCCATTTACTCATCGGAAACCATCGGTGAGAGTTCTCAGAGACAAACGATGTCAATCGAAGGGGGATGCACTTCACCAACATCTGTTCAAGATCACTGTCCAATCAATCCTCATTCAGATTACTGGGAGAACAGAAATTAA

Protein Analysis

1004

Amino Acids

110.61

Weight (kDa)

5.65

Isoelectric Point (pI)

34.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 166 - 271 4.7e-06 Leucine-rich repeat region
LRR_8 PF13855 289 - 348 6.6e-08 Leucine rich repeat
Malectin PF11721 393 - 577 2e-42 Malectin domain
Pkinase PF00069 660 - 858 5.7e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 662 - 859 3.3e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000292)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53420 AT3G14840
fragaria_vesca FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17850 FvH4_3g17850 FvH4_3g17850 FvH4_3g17850 FvH4_3g17851
malus_domestica MD03G1246600.v1.1 MD06G1045200.v1.1 MD06G1045400.v1.1 MD11G1267800.v1.1 MD11G1267900.v1.1 MD11G1268100.v1.1 MD11G1268300.v1.1 MD11G1268500.v1.1 MD11G1268600.v1.1
prunus_persica Prupe.4G157700_v2.0.a1 Prupe.4G157700_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157900_v2.0.a1 Prupe.4G157900_v2.0.a1 Prupe.4G157900_v2.0.a1
pyrus_communis pycom03g19540 pycom11g23600 pycom11g23630 pycom11g23690 pycom11g23720 pycom11g23730 pycom11g23740 pycom11g23750
rosa_chinensis RchiOBHm_Chr0c40g0503411 RchiOBHm_Chr0c40g0503421 RchiOBHm_Chr5g0029631 RchiOBHm_Chr5g0029661 RchiOBHm_Chr5g0029701 RchiOBHm_Chr5g0029741 RchiOBHm_Chr5g0029771 RchiOBHm_Chr5g0029781 RchiOBHm_Chr5g0029811 RchiOBHm_Chr5g0029851 RchiOBHm_Chr5g0029871 RchiOBHm_Chr5g0029891 RchiOBHm_Chr7g0222221
rosa_laevigata RLG00000017380 RLG00000032873 RLG00000033188 RLG00000033190 RLG00000033192 RLG00000033193 RLG00000033194 RLG00000033196 RLG00000033199 RLG00000033238
rosa_multiflora Rmu_co8359987.1_g000001 Rmu_co8444909.1_g000001 Rmu_sc0001608.1_g000007 Rmu_sc0001608.1_g000009 Rmu_sc0001608.1_g000013 Rmu_sc0001608.1_g000018 Rmu_sc0001608.1_g000023 Rmu_sc0001608.1_g000040 Rmu_sc0003238.1_g000016 Rmu_sc0003368.1_g000026 Rmu_sc0003368.1_g000034 Rmu_sc0003368.1_g000043 Rmu_sc0003368.1_g000047 Rmu_sc0003368.1_g000052 Rmu_sc0003368.1_g000054 Rmu_sc0004963.1_g000001
rosa_roxburghii Rroxscaffold_1G00050080 Rroxscaffold_1G00050090 Rroxscaffold_1G00050110 Rroxscaffold_1G00050120 Rroxscaffold_1G00050180 Rroxscaffold_1G00050190 Rroxscaffold_1G00050220 Rroxscaffold_1G00050270 Rroxscaffold_1G00050300
rosa_rugosa Rorug04G0065200 Rorug05G0114900 Rorug05G0115000 Rorug05G0115100 Rorug05G0120100 Rorug05G0238900
rosa_samantha Rh5AG207800 Rh5AG208000 Rh5AG208300 Rh5AG208400 Rh5AG208800 Rh5AG294900 Rh5AG295000 Rh5AG295400 Rh5CG230400 Rh7AG347800
rosa_wichuraiana Rw0G005370 Rw0G012460 Rw0G019060 Rw5G018910 Rw5G018920 Rw5G018930 Rw5G018940 Rw5G018960 Rw5G018970 Rw5G018980 Rw5G018990 Rw5G019000 Rw7G029840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1580
Acc36I ACCTGC 2 cut(s) 1580, 1932
AccB1I GGYRCC 3 cut(s) 425, 2042, 2485
AccI GTMKAC 1 cut(s) 2193
AccII CGCG 2 cut(s) 1402, 2226
AciI CCGC 8 cut(s) 177, 237, 260, 750, 1194, 1197, 1725, 2046
AclWI GGATC 4 cut(s) 161, 1733, 2663, 2689
AcoI YGGCCR 3 cut(s) 1078, 1374, 2267
AcsI RAATTY 7 cut(s) 154, 513, 568, 793, 1937, 2096, 2544
AcuI CTGAAG 1 cut(s) 2757
AfaI GTAC 6 cut(s) 247, 277, 631, 1165, 2201, 2443
AfeI AGCGCT 1 cut(s) 1099
AfiI CCNNNNNNNGG 7 cut(s) 176, 422, 687, 1076, 1785, 1930, 2678
AhlI ACTAGT 1 cut(s) 436
AjuI GAANNNNNNNTTGG 2 cut(s) 1992, 2024
AloI GAACNNNNNNTCC 4 cut(s) 397, 429, 1118, 1150
Alw26I GTCTC 4 cut(s) 1726, 2346, 2749, 2908
AlwI GGATC 4 cut(s) 161, 1733, 2663, 2689
Aor51HI AGCGCT 1 cut(s) 1099
AoxI GGCC 6 cut(s) 761, 1078, 1374, 2267, 2413, 2759
ApoI RAATTY 7 cut(s) 154, 513, 568, 793, 1937, 2096, 2544
ArsI GACNNNNNNTTYG 2 cut(s) 200, 232
AseI ATTAAT 2 cut(s) 900, 1215
Asp700I GAANNNNTTC 1 cut(s) 1114
AspLEI GCGC 4 cut(s) 1100, 1402, 1404, 2228
AspS9I GGNCC 6 cut(s) 761, 827, 1253, 1499, 1712, 2012
AsuC2I CCSGG 1 cut(s) 1757
AsuHPI GGTGA 4 cut(s) 364, 2791, 2912, 2940
AsuNHI GCTAGC 1 cut(s) 746
AvaII GGWCC 5 cut(s) 827, 1253, 1499, 1712, 2012
BaeGI GKGCMC 2 cut(s) 428, 2629
BalI TGGCCA 2 cut(s) 1376, 2269
BanI GGYRCC 3 cut(s) 425, 2042, 2485
BanII GRGCYC 1 cut(s) 2803
BbsI GAAGAC 2 cut(s) 542, 2763
BbvCI CCTCAGC 2 cut(s) 956, 1271
BccI CCATC 6 cut(s) 416, 485, 1421, 2033, 2723, 2903
BcgI CGANNNNNNTGC 4 cut(s) 1749, 1783, 2072, 2106
BciVI GTATCC 2 cut(s) 1231, 1700
BclI TGATCA 1 cut(s) 280
BcnI CCSGG 1 cut(s) 1757
BcoDI GTCTC 4 cut(s) 1726, 2346, 2749, 2908
BcuI ACTAGT 1 cut(s) 436
BfaI CTAG 6 cut(s) 437, 747, 2417, 2457, 2657, 2663
BfmI CTRYAG 4 cut(s) 1329, 1562, 1797, 2748
BfoI RGCGCY 1 cut(s) 1101
BfuAI ACCTGC 2 cut(s) 1580, 1932
BfuI GTATCC 2 cut(s) 1231, 1700
BglI GCCNNNNNGGC 1 cut(s) 2275
BglII AGATCT 1 cut(s) 285
BmcAI AGTACT 2 cut(s) 277, 631
Bme1390I CCNGG 1 cut(s) 1757
Bme18I GGWCC 5 cut(s) 827, 1253, 1499, 1712, 2012
BmgT120I GGNCC 6 cut(s) 761, 827, 1253, 1499, 1712, 2012
BmiI GGNNCC 8 cut(s) 359, 406, 427, 475, 1681, 2044, 2487, 2802
BmrFI CCNGG 1 cut(s) 1757
BmrI ACTGGG 5 cut(s) 146, 599, 768, 1688, 3007
BmsI GCATC 5 cut(s) 247, 1951, 2150, 2564, 2930
BmtI GCTAGC 1 cut(s) 750
BmuI ACTGGG 5 cut(s) 146, 599, 768, 1688, 3007
BpiI GAAGAC 2 cut(s) 542, 2763
BpmI CTGGAG 2 cut(s) 564, 636
Bpu10I CCTNAGC 3 cut(s) 70, 956, 1271
BpuEI CTTGAG 3 cut(s) 303, 872, 1966
BpuMI CCSGG 1 cut(s) 1757
Bsa29I ATCGAT 1 cut(s) 525
BsaBI GATNNNNATC 3 cut(s) 2385, 2714, 2927
BsaJI CCNNGG 6 cut(s) 451, 554, 1581, 1755, 2595, 2672
BsaWI WCCGGW 1 cut(s) 205
BsaXI ACNNNNNCTCC 2 cut(s) 397, 427
Bsc4I CCNNNNNNNGG 7 cut(s) 176, 422, 687, 1076, 1785, 1930, 2678
Bse118I RCCGGY 1 cut(s) 1076
Bse3DI GCAATG 1 cut(s) 2505
Bse8I GATNNNNATC 3 cut(s) 2385, 2714, 2927
BseCI ATCGAT 1 cut(s) 525
BseDI CCNNGG 6 cut(s) 451, 554, 1581, 1755, 2595, 2672
BseGI GGATG 5 cut(s) 408, 477, 836, 2165, 2945
BseJI GATNNNNATC 3 cut(s) 2385, 2714, 2927
BseLI CCNNNNNNNGG 7 cut(s) 176, 422, 687, 1076, 1785, 1930, 2678
BseMI GCAATG 1 cut(s) 2505
BseMII CTCAG 5 cut(s) 797, 860, 970, 1285, 2924
BsePI GCGCGC 1 cut(s) 1400
BseSI GKGCMC 2 cut(s) 428, 2629
BseX3I CGGCCG 1 cut(s) 1078
BseYI CCCAGC 2 cut(s) 1670, 1823
Bsh1236I CGCG 2 cut(s) 1402, 2226
Bsh1285I CGRYCG 2 cut(s) 525, 1081
BshFI GGCC 6 cut(s) 763, 1080, 1376, 2269, 2415, 2761
BshNI GGYRCC 3 cut(s) 425, 2042, 2485
BshVI ATCGAT 1 cut(s) 525
BsiEI CGRYCG 2 cut(s) 525, 1081
BsiSI CCGG 4 cut(s) 206, 1077, 1081, 1757
BslFI GGGAC 1 cut(s) 968
BslI CCNNNNNNNGG 7 cut(s) 176, 422, 687, 1076, 1785, 1930, 2678
BsmAI GTCTC 4 cut(s) 1726, 2346, 2749, 2908
BsmFI GGGAC 1 cut(s) 968
BsnI GGCC 6 cut(s) 763, 1080, 1376, 2269, 2415, 2761
Bsp1286I GDGCHC 3 cut(s) 428, 2629, 2803
Bsp1407I TGTACA 1 cut(s) 1163
BspACI CCGC 8 cut(s) 177, 237, 260, 750, 1194, 1197, 1725, 2046
BspANI GGCC 6 cut(s) 763, 1080, 1376, 2269, 2415, 2761
BspCNI CTCAG 5 cut(s) 798, 861, 969, 1284, 2923
BspDI ATCGAT 1 cut(s) 525
BspFNI CGCG 2 cut(s) 1402, 2226
BspLI GGNNCC 8 cut(s) 359, 406, 427, 475, 1681, 2044, 2487, 2802
BspMAI CTGCAG 2 cut(s) 1566, 2752
BspMI ACCTGC 2 cut(s) 1580, 1932
BspOI GCTAGC 1 cut(s) 750
BspPI GGATC 4 cut(s) 161, 1733, 2663, 2689
BspT107I GGYRCC 3 cut(s) 425, 2042, 2485
BsrDI GCAATG 1 cut(s) 2505
BsrFI RCCGGY 1 cut(s) 1076
BsrGI TGTACA 1 cut(s) 1163
BssAI RCCGGY 1 cut(s) 1076
BssECI CCNNGG 6 cut(s) 451, 554, 1581, 1755, 2595, 2672
BssHII GCGCGC 1 cut(s) 1400
BssT1I CCWWGG 5 cut(s) 451, 554, 1581, 2595, 2672
Bst4CI ACNGT 5 cut(s) 1243, 1462, 2334, 2591, 2972
Bst6I CTCTTC 1 cut(s) 973
BstAPI GCANNNNNTGC 1 cut(s) 644
BstAUI TGTACA 1 cut(s) 1163
BstDEI CTNAG 9 cut(s) 70, 806, 869, 956, 1271, 1880, 2756, 2821, 2910
BstF5I GGATG 5 cut(s) 408, 477, 836, 2165, 2945
BstFNI CGCG 2 cut(s) 1402, 2226
BstH2I RGCGCY 1 cut(s) 1101
BstHHI GCGC 4 cut(s) 1100, 1402, 1404, 2228
BstMAI GTCTC 4 cut(s) 1726, 2346, 2749, 2908
BstMCI CGRYCG 2 cut(s) 525, 1081
BstNSI RCATGY 2 cut(s) 16, 2788
BstSCI CCNGG 1 cut(s) 1755
BstSFI CTRYAG 4 cut(s) 1329, 1562, 1797, 2748
BstSLI GKGCMC 2 cut(s) 428, 2629
BstUI CGCG 2 cut(s) 1402, 2226
BstV2I GAAGAC 2 cut(s) 542, 2763
BstX2I RGATCY 2 cut(s) 285, 1738
BstXI CCANNNNNNTGG 1 cut(s) 2722
BstYI RGATCY 2 cut(s) 285, 1738
BstZI CGGCCG 1 cut(s) 1078
Bsu15I ATCGAT 1 cut(s) 525
BsuI GTATCC 2 cut(s) 1231, 1700
BsuRI GGCC 6 cut(s) 763, 1080, 1376, 2269, 2415, 2761
BsuTUI ATCGAT 1 cut(s) 525
BtsCI GGATG 5 cut(s) 408, 477, 836, 2165, 2945
BtsIMutI CAGTG 8 cut(s) 134, 166, 875, 1299, 2572, 2781, 2857, 2968
BveI ACCTGC 2 cut(s) 1580, 1932
CfoI GCGC 4 cut(s) 1100, 1402, 1404, 2228
Cfr10I RCCGGY 1 cut(s) 1076
Cfr13I GGNCC 6 cut(s) 761, 827, 1253, 1499, 1712, 2012
ClaI ATCGAT 1 cut(s) 525
CseI GACGC 1 cut(s) 2232
Csp6I GTAC 6 cut(s) 246, 276, 630, 1164, 2200, 2442
CspCI CAANNNNNGTGG 2 cut(s) 1325, 1360
CviQI GTAC 6 cut(s) 246, 276, 630, 1164, 2200, 2442
DdeI CTNAG 9 cut(s) 70, 806, 869, 956, 1271, 1880, 2756, 2821, 2910
DraI TTTAAA 1 cut(s) 1911
EaeI YGGCCR 3 cut(s) 1078, 1374, 2267
EagI CGGCCG 1 cut(s) 1078
Eam1104I CTCTTC 1 cut(s) 973
EarI CTCTTC 1 cut(s) 973
EclXI CGGCCG 1 cut(s) 1078
Eco130I CCWWGG 5 cut(s) 451, 554, 1581, 2595, 2672
Eco147I AGGCCT 1 cut(s) 2761
Eco24I GRGCYC 1 cut(s) 2803
Eco32I GATATC 1 cut(s) 2403
Eco47I GGWCC 5 cut(s) 827, 1253, 1499, 1712, 2012
Eco47III AGCGCT 1 cut(s) 1099
Eco52I CGGCCG 1 cut(s) 1078
Eco57I CTGAAG 1 cut(s) 2757
EcoRI GAATTC 1 cut(s) 2544
EcoRV GATATC 1 cut(s) 2403
EcoT14I CCWWGG 5 cut(s) 451, 554, 1581, 2595, 2672
EcoT38I GRGCYC 1 cut(s) 2803
ErhI CCWWGG 5 cut(s) 451, 554, 1581, 2595, 2672
FalI AAGNNNNNCTT 2 cut(s) 321, 353
FaqI GGGAC 1 cut(s) 968
FauNDI CATATG 1 cut(s) 1228
FbaI TGATCA 1 cut(s) 280
FblI GTMKAC 1 cut(s) 2193
FokI GGATG 5 cut(s) 395, 464, 823, 2172, 2952
FriOI GRGCYC 1 cut(s) 2803
FspBI CTAG 6 cut(s) 437, 747, 2417, 2457, 2657, 2663
GlaI GCGC 4 cut(s) 1099, 1401, 1403, 2227
GsaI CCCAGC 2 cut(s) 1674, 1827
GsuI CTGGAG 2 cut(s) 564, 636
HaeII RGCGCY 1 cut(s) 1101
HaeIII GGCC 6 cut(s) 763, 1080, 1376, 2269, 2415, 2761
HapII CCGG 4 cut(s) 206, 1077, 1081, 1757
HgaI GACGC 1 cut(s) 2232
HhaI GCGC 4 cut(s) 1100, 1402, 1404, 2228
Hin6I GCGC 4 cut(s) 1098, 1400, 1402, 2226
HinP1I GCGC 4 cut(s) 1098, 1400, 1402, 2226
HincII GTYRAC 1 cut(s) 1385
HindII GTYRAC 1 cut(s) 1385
HindIII AAGCTT 3 cut(s) 111, 1513, 2423
HpaII CCGG 4 cut(s) 206, 1077, 1081, 1757
HphI GGTGA 4 cut(s) 364, 2791, 2912, 2940
Hpy166II GTNNAC 5 cut(s) 442, 1385, 1465, 1491, 2194
Hpy188III TCNNGA 7 cut(s) 320, 543, 1742, 1919, 2093, 2618, 2963
Hpy8I GTNNAC 5 cut(s) 442, 1385, 1465, 1491, 2194
HpyCH4III ACNGT 5 cut(s) 1243, 1462, 2334, 2591, 2972
HpyCH4IV ACGT 1 cut(s) 228
HpyF3I CTNAG 9 cut(s) 70, 806, 869, 956, 1271, 1880, 2756, 2821, 2910
HpySE526I ACGT 1 cut(s) 228
HspAI GCGC 4 cut(s) 1098, 1400, 1402, 2226
KroI GCCGGC 1 cut(s) 1076
KroNI GCCGGC 1 cut(s) 1078
Ksp22I TGATCA 1 cut(s) 280
LmnI GCTCC 5 cut(s) 80, 363, 1006, 1900, 2806
LweI GCATC 5 cut(s) 247, 1951, 2150, 2564, 2930
MaeI CTAG 6 cut(s) 437, 747, 2417, 2457, 2657, 2663
MaeII ACGT 1 cut(s) 228
MaeIII GTNAC 6 cut(s) 229, 389, 499, 1207, 1633, 2831
MboII GAAGA 9 cut(s) 542, 990, 2336, 2350, 2410, 2444, 2583, 2624, 2763
MfeI CAATTG 3 cut(s) 241, 375, 2049
MflI RGATCY 2 cut(s) 285, 1738
MhlI GDGCHC 3 cut(s) 428, 2629, 2803
MlsI TGGCCA 2 cut(s) 1376, 2269
MluNI TGGCCA 2 cut(s) 1376, 2269
MlyI GAGTC 2 cut(s) 990, 2828
MmeI TCCRAC 4 cut(s) 993, 1526, 1792, 2200
Mox20I TGGCCA 2 cut(s) 1376, 2269
MroNI GCCGGC 1 cut(s) 1076
MroXI GAANNNNTTC 1 cut(s) 1114
MscI TGGCCA 2 cut(s) 1376, 2269
MslI CAYNNNNRTG 1 cut(s) 2720
Msp20I TGGCCA 2 cut(s) 1376, 2269
MspA1I CMGCKG 1 cut(s) 177
MspI CCGG 4 cut(s) 206, 1077, 1081, 1757
MspR9I CCNGG 1 cut(s) 1757
MunI CAATTG 3 cut(s) 241, 375, 2049
MvnI CGCG 2 cut(s) 1402, 2226
NaeI GCCGGC 1 cut(s) 1078
NciI CCSGG 1 cut(s) 1757
NdeI CATATG 1 cut(s) 1228
NgoMIV GCCGGC 1 cut(s) 1076
NheI GCTAGC 1 cut(s) 746
NlaIV GGNNCC 8 cut(s) 359, 406, 427, 475, 1681, 2044, 2487, 2802
NmeAIII GCCGAG 1 cut(s) 651
NmuCI GTSAC 3 cut(s) 229, 1207, 2831
NspI RCATGY 2 cut(s) 16, 2788
PaeI GCATGC 1 cut(s) 2788
PaqCI CACCTGC 1 cut(s) 1580
PauI GCGCGC 1 cut(s) 1400
PceI AGGCCT 1 cut(s) 2761
PdiI GCCGGC 1 cut(s) 1078
PdmI GAANNNNTTC 1 cut(s) 1114
PfeI GAWTC 8 cut(s) 739, 833, 1115, 1355, 1552, 2327, 2825, 2873
PflFI GACNNNGTC 1 cut(s) 2663
Ple19I CGATCG 1 cut(s) 525
PleI GAGTC 2 cut(s) 989, 2828
PpsI GAGTC 2 cut(s) 989, 2828
PshBI ATTAAT 2 cut(s) 900, 1215
PspFI CCCAGC 2 cut(s) 1670, 1823
PspN4I GGNNCC 8 cut(s) 359, 406, 427, 475, 1681, 2044, 2487, 2802
PspPI GGNCC 6 cut(s) 761, 827, 1253, 1499, 1712, 2012
PstI CTGCAG 2 cut(s) 1566, 2752
PsuI RGATCY 2 cut(s) 285, 1738
PsyI GACNNNGTC 1 cut(s) 2663
PteI GCGCGC 1 cut(s) 1400
PvuI CGATCG 1 cut(s) 525
RsaI GTAC 6 cut(s) 247, 277, 631, 1165, 2201, 2443
RsaNI GTAC 6 cut(s) 246, 276, 630, 1164, 2200, 2442
RseI CAYNNNNRTG 1 cut(s) 2720
Sau96I GGNCC 6 cut(s) 761, 827, 1253, 1499, 1712, 2012
ScaI AGTACT 2 cut(s) 277, 631
SchI GAGTC 2 cut(s) 990, 2828
ScrFI CCNGG 1 cut(s) 1757
SduI GDGCHC 3 cut(s) 428, 2629, 2803
SfaNI GCATC 5 cut(s) 247, 1951, 2150, 2564, 2930
SfcI CTRYAG 4 cut(s) 1329, 1562, 1797, 2748
SinI GGWCC 5 cut(s) 827, 1253, 1499, 1712, 2012
SmiMI CAYNNNNRTG 1 cut(s) 2720
SmlI CTYRAG 3 cut(s) 318, 851, 1945
SmoI CTYRAG 3 cut(s) 318, 851, 1945
SpeI ACTAGT 1 cut(s) 436
SphI GCATGC 1 cut(s) 2788
SseBI AGGCCT 1 cut(s) 2761
SsiI CCGC 8 cut(s) 177, 237, 260, 750, 1194, 1197, 1725, 2046
SspI AATATT 4 cut(s) 215, 898, 1576, 1833
SspMI CTAG 6 cut(s) 437, 747, 2417, 2457, 2657, 2663
StuI AGGCCT 1 cut(s) 2761
StyD4I CCNGG 1 cut(s) 1755
StyI CCWWGG 5 cut(s) 451, 554, 1581, 2595, 2672
TaaI ACNGT 5 cut(s) 1243, 1462, 2334, 2591, 2972
TaiI ACGT 1 cut(s) 231
TaqI TCGA 7 cut(s) 88, 525, 602, 801, 1555, 2667, 2931
TatI WGTACW 4 cut(s) 275, 629, 1163, 2199
TauI GCSGC 3 cut(s) 240, 263, 1197
TfiI GAWTC 8 cut(s) 739, 833, 1115, 1355, 1552, 2327, 2825, 2873
TscAI CASTG 8 cut(s) 141, 166, 882, 1306, 2572, 2781, 2857, 2975
TseFI GTSAC 3 cut(s) 229, 1207, 2831
Tsp45I GTSAC 3 cut(s) 229, 1207, 2831
TspGWI ACGGA 4 cut(s) 330, 417, 686, 1646
TspRI CASTG 8 cut(s) 141, 166, 882, 1306, 2572, 2781, 2857, 2975
Tth111I GACNNNGTC 1 cut(s) 2663
VpaK11BI GGWCC 5 cut(s) 827, 1253, 1499, 1712, 2012
VspI ATTAAT 2 cut(s) 900, 1215
XapI RAATTY 7 cut(s) 154, 513, 568, 793, 1937, 2096, 2544
XceI RCATGY 2 cut(s) 16, 2788
XcmI CCANNNNNNNNNTGG 1 cut(s) 2773
XmiI GTMKAC 1 cut(s) 2193
XmnI GAANNNNTTC 1 cut(s) 1114
XspI CTAG 6 cut(s) 437, 747, 2417, 2457, 2657, 2663
ZrmI AGTACT 2 cut(s) 277, 631
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.